Hybrid Zones and Clines
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Hybrid Vigor Between Native and Introduced Salamanders Raises New Challenges for Conservation
Hybrid vigor between native and introduced salamanders raises new challenges for conservation Benjamin M. Fitzpatrick*† and H. Bradley Shaffer‡ *Ecology and Evolutionary Biology, University of Tennessee, Knoxville, TN 37996; and ‡Evolution and Ecology, University of California, Davis, CA 95616 Edited by John C. Avise, University of California, Irvine, CA, and approved August 10, 2007 (received for review May 22, 2007) Hybridization between differentiated lineages can have many populations by alleviating inbreeding depression (13, 14) or different consequences depending on fitness variation among facilitating adaptive evolution in modified or degraded habitats hybrid offspring. When introduced organisms hybridize with na- (15–17). tives, the ensuing evolutionary dynamics may substantially com- The long-term consequences of hybridization are strongly plicate conservation decisions. Understanding the fitness conse- influenced by the genetic basis of hybrid fitness. In the case of quences of hybridization is an important first step in predicting its hybrid vigor, genetic models fall into two classes: heterozygote evolutionary outcome and conservation impact. Here, we mea- advantage and recombinant hybrid vigor (18–20). Heterozygote sured natural selection caused by differential viability of hybrid advantage (overdominance) refers to beneficial interactions larvae in wild populations where native California Tiger between heterospecific alleles of a single locus. Recombinant Salamanders (Ambystoma californiense) and introduced Barred hybrid vigor depends on multilocus genotypes and may be caused Tiger Salamanders (Ambystoma tigrinum mavortium) have been by epistasis (beneficial interactions between heterospecific al- hybridizing for 50–60 years. We found strong evidence of hybrid leles from different loci) or by complementary effects of inde- vigor; mixed-ancestry genotypes had higher survival rates than pendent advantageous alleles from each parental population (19, genotypes containing mostly native or mostly introduced alleles. -
Transformations of Lamarckism Vienna Series in Theoretical Biology Gerd B
Transformations of Lamarckism Vienna Series in Theoretical Biology Gerd B. M ü ller, G ü nter P. Wagner, and Werner Callebaut, editors The Evolution of Cognition , edited by Cecilia Heyes and Ludwig Huber, 2000 Origination of Organismal Form: Beyond the Gene in Development and Evolutionary Biology , edited by Gerd B. M ü ller and Stuart A. Newman, 2003 Environment, Development, and Evolution: Toward a Synthesis , edited by Brian K. Hall, Roy D. Pearson, and Gerd B. M ü ller, 2004 Evolution of Communication Systems: A Comparative Approach , edited by D. Kimbrough Oller and Ulrike Griebel, 2004 Modularity: Understanding the Development and Evolution of Natural Complex Systems , edited by Werner Callebaut and Diego Rasskin-Gutman, 2005 Compositional Evolution: The Impact of Sex, Symbiosis, and Modularity on the Gradualist Framework of Evolution , by Richard A. Watson, 2006 Biological Emergences: Evolution by Natural Experiment , by Robert G. B. Reid, 2007 Modeling Biology: Structure, Behaviors, Evolution , edited by Manfred D. Laubichler and Gerd B. M ü ller, 2007 Evolution of Communicative Flexibility: Complexity, Creativity, and Adaptability in Human and Animal Communication , edited by Kimbrough D. Oller and Ulrike Griebel, 2008 Functions in Biological and Artifi cial Worlds: Comparative Philosophical Perspectives , edited by Ulrich Krohs and Peter Kroes, 2009 Cognitive Biology: Evolutionary and Developmental Perspectives on Mind, Brain, and Behavior , edited by Luca Tommasi, Mary A. Peterson, and Lynn Nadel, 2009 Innovation in Cultural Systems: Contributions from Evolutionary Anthropology , edited by Michael J. O ’ Brien and Stephen J. Shennan, 2010 The Major Transitions in Evolution Revisited , edited by Brett Calcott and Kim Sterelny, 2011 Transformations of Lamarckism: From Subtle Fluids to Molecular Biology , edited by Snait B. -
Evolutionary Trends
Evo Edu Outreach (2008) 1:259–273 DOI 10.1007/s12052-008-0055-6 ORIGINAL SCIENTIFIC ARTICLE Evolutionary Trends T. Ryan Gregory Published online: 25 June 2008 # Springer Science + Business Media, LLC 2008 Abstract The occurrence, generality, and causes of large- a pattern alone, to extrapolate from individual cases to scale evolutionary trends—directional changes over long entire systems, and to focus on extremes rather than periods of time—have been the subject of intensive study recognizing diversity. This is especially true in the study and debate in evolutionary science. Large-scale patterns in the of historically contingent processes such as evolution, history of life have also been of considerable interest to which spans nearly four billion years and encompasses nonspecialists, although misinterpretations and misunder- the rise and disappearance of hundreds of millions, if not standings of this important issue are common and can have billions, of species and the struggles of an unimaginably significant implications for an overall understanding of large number of individual organisms. evolution. This paper provides an overview of how trends This is not to say that no patterns exist in the history of are identified, categorized, and explained in evolutionary life, only that the situation is often far more complex than is biology. Rather than reviewing any particular trend in detail, acknowledged. Notably, the most common portrayals of the intent is to provide a framework for understanding large- evolution in nonacademic settings include not just change, scale evolutionary patterns in general and to highlight the fact but directional, adaptive change—if not outright notions of that both the patterns and their underlying causes are usually “advancement”—and it is fair to say that such a view has in quite complex. -
Geographic Cline Analysis As a Tool for Studying Genome-Wide Variation: a Case Study of Pollinator-Mediated Divergence in a Monkeyflower
bioRxiv preprint doi: https://doi.org/10.1101/036954; this version posted January 15, 2016. The copyright holder for this preprint (which was not certified by peer review) is the author/funder, who has granted bioRxiv a license to display the preprint in perpetuity. It is made available under aCC-BY-NC-ND 4.0 International license. Geographic cline analysis as a tool for studying genome-wide variation: a case study of pollinator-mediated divergence in a monkeyflower Sean Stankowski1,2, James M. Sobel3 and Matthew A. Streisfeld1 1Institute of Ecology and Evolution, University of Oregon, Eugene, Oregon, United States of America 2Corresponding author E-mail: [email protected] 3Department of Biological Sciences, Binghamton University, Binghamton, New York, United States of America Keywords: ecotype formation, hybrid zone, Mimulus aurantiacus, pollinator isolation, reproductive isolation Running title: Genomics of pollinator-mediated divergence in a monkeyflower For consideration in the MEC special issue: The molecular basis of adaptation and ecological speciation - integrating genomic and molecular approaches; section: Ecological speciation genomics: advances and limitations 1 bioRxiv preprint doi: https://doi.org/10.1101/036954; this version posted January 15, 2016. The copyright holder for this preprint (which was not certified by peer review) is the author/funder, who has granted bioRxiv a license to display the preprint in perpetuity. It is made available under aCC-BY-NC-ND 4.0 International license. Abstract A major goal of speciation research is to reveal the genomic signatures that accompany the speciation process. Genome scans are routinely used to explore genome-wide variation and identify highly differentiated loci that may contribute to ecological divergence, but they do not incorporate spatial, phenotypic, or environmental data that might enhance outlier detection. -
Speciation in Heliconius Butterflies: Minimal Contact Followed 2 by Millions of Generations of Hybridisation 3 Simon H
bioRxiv preprint doi: https://doi.org/10.1101/015800; this version posted March 2, 2015. The copyright holder for this preprint (which was not certified by peer review) is the author/funder, who has granted bioRxiv a license to display the preprint in perpetuity. It is made available under aCC-BY-NC 4.0 International license. 1 1 Speciation in Heliconius Butterflies: Minimal Contact Followed 2 by Millions of Generations of Hybridisation 3 Simon H. Martin*1, Anders Eriksson*1,2, Krzysztof M. Kozak1, Andrea Manica1 and 4 Chris D. Jiggins1 5 1 Department of Zoology, University of Cambridge, Downing Street, Cambridge, CB2 6 3EJ, United Kingdom 7 2 Integrative Systems Biology Laboratory, King Abdullah University of Science 8 and Technology, Thuwal 23955-6900, Kingdom of Saudi Arabia 9 * These authors contributed equally 10 Corresponding Author: S.H. Martin, [email protected] 11 Running Head: Change in the rate of gene flow during butterfly speciation bioRxiv preprint doi: https://doi.org/10.1101/015800; this version posted March 2, 2015. The copyright holder for this preprint (which was not certified by peer review) is the author/funder, who has granted bioRxiv a license to display the preprint in perpetuity. It is made available under aCC-BY-NC 4.0 International license. 2 12 Abstract 13 Documenting the full extent of gene flow during speciation poses a challenge, as 14 species ranges change over time and current rates of hybridisation might not reflect 15 historical trends. Theoretical work has emphasized the potential for speciation in the 16 face of ongoing hybridisation, and the genetic mechanisms that might facilitate this 17 process. -
Hybrids and Hybrid Zones
View metadata, citation and similar papers at core.ac.uk brought to you by CORE provided by Digital.CSIC Hybrids and hybrid zones Arnold’s new book on hybridization1, recently reviewed by Ritchie in TREE 2, has brought attention to an old, controversial but revitalized topic in evolutionary biology. The two reviews2,3 we have read share a sceptical attitude towards studies of hybridization lying outside the hybrid zone theory. They consider Arnold’s book too ‘opinionated’2 and ‘an argument for a greater emphasis on the positive role of hybridization in evolution’ rather than a ‘comprehensive review’3. However, one of the merits of the book is that it devotes a great deal of effort towards reconciling divergent approaches to the topic. Arnold dedicates equal importance to animal and plant studies, as acknowledged by Ritchie2, and also puts much emphasis on the analysis of hybrid zones. In fact, when proposing a model for the birth of new evolutionary hybrid lineages he places his ‘new conceptual framework (the evolutionary novelty model)’ within the hybrid zone framework. Our criticism of this proposal is that it may be too rigid to fit scenarios departing from the specific model of hybrid speciation proposed by Grant4, that is, recombinational speciation. In our opinion, relying exclusively on the hybrid zone framework to assess the role of hybrids in evolution is misleading. Hybrid zones usually imply relatively recent events and species with strong reproductive barriers. The tension zone model assumes that hybrid zones are maintained by a balance between selection against hybrid individuals and dispersal of parental individuals into the hybrid zone5. -
And Ford, I; Ford, '953) on the Other Hand Have Put Forward a View Intermediate Between the Extreme Ones of Darwin on the One Hand and Goldschmidt on the Other
THE EVOLUTION OF MIMICRY IN THE BUTTERFLY PAPILIO DARDANUS C. A. CLARKE and P. M. SHEPPARD Departments of Medicine and Zoology, University of Liverpool Received23.V.59 1.INTRODUCTION WHENBatesputforward the mimicry hypothesis which bears his name, Darwin (1872), although accepting it, had some difficulty in explaining the evolution of the mimetic resemblance of several distinct species to one distasteful model by a series of small changes, a require- ment of his general theory of evolution. He said "it is necessary to suppose in some cases that ancient members belonging to several distinct groups, before they had diverged to their present extent, accidentally resembled a member of another and protected group in a sufficient degree to afford some slight protection; this having given the basis for the subsequent acquisition of the most perfect resemb- lance ". Punnett (1915) realised that the difficulty is even more acute when one is dealing with a polymorphic species whose forms mimic very distantly related models. Knowing that, in those butterflies which had been investigated genetically, the forms differed by single allelomorphs he concluded that the mimicry did not evolve gradually and did not confer any advantage or disadvantage to the individual. He argued that an allelomorph arises at a single step by mutation and that therefore the mimicry also arises by chance at a single step. Goldschmidt (x) although not denying that mimicry confers some advantage to its possessors also maintained that the resemblance arises fully perfected by a single mutation of a gene distinct from that producing the colour pattern in the model, but producing a similar effect in the mimic. -
Linkage Disequilibrium in Human Ribosomal Genes: Implications for Multigene Family Evolution
Copyright 0 1988 by the Genetics Societyof America Linkage Disequilibrium in Human Ribosomal Genes: Implications for Multigene Family Evolution Peter Seperack,*” Montgomery Slatkin+ and Norman Arnheim*.* *Department of Biochemistry and Program in Cellular andDevelopmental Biology, State University of New York, Stony Brook, New York I 1794, ?Department of Zoology, University of California, Berkeley, California 94720, and *Department of Biological Sciences, University of Southern California, Los Angeles, California 90089-0371 Manuscript received January8, 1988 Revised copy accepted April 2 1, 1988 ABSTRACT Members of the rDNA multigene family withina species do not evolve independently,rather, they evolve together in a concerted fashion.Between species, however, each multigenefamily does evolve independently indicating that mechanisms exist whichwill amplify and fix new mutations bothwithin populations and within species. In order to evaluate the possible mechanisms by which mutation, amplification and fixation occurwe have determined thelevel of linkage disequilibrium betweentwo polymorphic sites in human ribosomal genes in five racial groups and among individuals within two of these groups.The marked linkage disequilibriumwe observe within individuals suggeststhat sister chromatid exchangesare much more important than homologousor nonhomologous recombination events in the concerted evolution of the rDNA family and further that recent models of molecular drive may not apply to the evolution of the rDNA multigene family. HE human ribosomal gene family is composed of ferences among individualsin the geneticcomposition T approximately 400 members which arear- of the multigene family because they create linkage ranged in small tandem clusters on five pairs of chro- disequilibrium among different members of familythe mosomes (for reviews, see LONG and DAWID1980; (OHTA1980a, b;NAGYLAKI and PETES1982; SLATKIN WILSON1982). -
Recent Hybrids Recapitulate Ancient Hybrid Outcomes
Utah State University DigitalCommons@USU Ecology Center Publications Ecology Center 5-1-2020 Recent Hybrids Recapitulate Ancient Hybrid Outcomes Samridhi Chaturvedi Utah State University Lauren K. Lucas Utah State University C. Alex Buerkle University of Wyoming James A. Fordyce University of Tennessee, Knoxville Matthew L. Forister University of Nevada, Reno Chris C. Nice Texas State University See next page for additional authors Follow this and additional works at: https://digitalcommons.usu.edu/eco_pubs Part of the Ecology and Evolutionary Biology Commons Recommended Citation Chaturvedi, S., Lucas, L.K., Buerkle, C.A. et al. Recent hybrids recapitulate ancient hybrid outcomes. Nat Commun 11, 2179 (2020). https://doi.org/10.1038/s41467-020-15641-x This Article is brought to you for free and open access by the Ecology Center at DigitalCommons@USU. It has been accepted for inclusion in Ecology Center Publications by an authorized administrator of DigitalCommons@USU. For more information, please contact [email protected]. Authors Samridhi Chaturvedi, Lauren K. Lucas, C. Alex Buerkle, James A. Fordyce, Matthew L. Forister, Chris C. Nice, and Zachariah Gompert This article is available at DigitalCommons@USU: https://digitalcommons.usu.edu/eco_pubs/122 ARTICLE https://doi.org/10.1038/s41467-020-15641-x OPEN Recent hybrids recapitulate ancient hybrid outcomes Samridhi Chaturvedi1,2,3, Lauren K. Lucas1, C. Alex Buerkle 4, James A. Fordyce5, Matthew L. Forister6, ✉ Chris C. Nice7 & Zachariah Gompert1,2 Genomic outcomes of hybridization depend on selection and recombination in hybrids. Whether these processes have similar effects on hybrid genome composition in con- 1234567890():,; temporary hybrid zones versus ancient hybrid lineages is unknown. -
Lineages, Splits and Divergence Challenge Whether the Terms Anagenesis and Cladogenesis Are Necessary
Biological Journal of the Linnean Society, 2015, , – . With 2 figures. Lineages, splits and divergence challenge whether the terms anagenesis and cladogenesis are necessary FELIX VAUX*, STEVEN A. TREWICK and MARY MORGAN-RICHARDS Ecology Group, Institute of Agriculture and Environment, Massey University, Palmerston North, New Zealand Received 3 June 2015; revised 22 July 2015; accepted for publication 22 July 2015 Using the framework of evolutionary lineages to separate the process of evolution and classification of species, we observe that ‘anagenesis’ and ‘cladogenesis’ are unnecessary terms. The terms have changed significantly in meaning over time, and current usage is inconsistent and vague across many different disciplines. The most popular definition of cladogenesis is the splitting of evolutionary lineages (cessation of gene flow), whereas anagenesis is evolutionary change between splits. Cladogenesis (and lineage-splitting) is also regularly made synonymous with speciation. This definition is misleading as lineage-splitting is prolific during evolution and because palaeontological studies provide no direct estimate of gene flow. The terms also fail to incorporate speciation without being arbitrary or relative, and the focus upon lineage-splitting ignores the importance of divergence, hybridization, extinction and informative value (i.e. what is helpful to describe as a taxon) for species classification. We conclude and demonstrate that evolution and species diversity can be considered with greater clarity using simpler, more transparent terms than anagenesis and cladogenesis. Describing evolution and taxonomic classification can be straightforward, and there is no need to ‘make words mean so many different things’. © 2015 The Linnean Society of London, Biological Journal of the Linnean Society, 2015, 00, 000–000. -
The Cambrian and Beyond A. Types of Fossils 1. Compression
The Cambrian and Beyond A. Types of Fossils 1. Compression & Impression fossils 2. Permineralized fossils 3. Casts & Molds 4. Unaltered remains – mummy B. Sorting out the Fossil Record: Strengths & Weaknesses 1. Lowland and shallow marine bias 2. Hard part bias 3. Age bias 4. Goal is to recognize the constraints and still be creative C. Cambrian Explosion Revisited – The Metazoan Body Plan 1. All animal phyla appeared in ~40 million years! 2. Symmetry – Diploblasts and Triplotblasts (Radial and Bilateral) a. Ecto/Endo vs Ecto/Endo/Mesoderm 3. Coelom or fluid filled cavity via mesoderm lined peritoneum a. Coelomates, pseudocoelomates, acoelomates 4. Protostomes (Ecdysozoans & Lophotrochozoans) and deuterostomes a. both have bilateral symmetry, true coeloms, 3 tissue types b. spiral cleavage vs. radial cleavage c. gastrulation – first the mouth or second the mouth 5. Notochords.... D. Ediacaran & Burgess Shale Faunas 1. Ediacaran – Soft bodies forms, many trace type fossils 2. Burgess Shale – Wide variety of body plans evolved, only a subset remained, fewer yet exist today. Lecture 12.1 E. Phylogeny of Metazoans: New Ways to Make a Living 1. Environmental forcing functions, e.g., Oxygen Story 2. Genetic forcing functions, e.g., HOM/Hox genes F. Macroevolutionary Patterns: Evolution’s Greatest Hits! 1. Adaptive radiations correlated with adaptive innovations giving rise to a number of descendant species that occupy a large range of niches. a. Lacking competitors over superior adaptations 2. Major Examples: ! Cambrian Explosion for animals ! Twice with land plants, Silurian/Devonian and Cretaceous G. Punctuated Equilibrium 1. Darwin: aware of the problem, but wrote off as patchy record due to incompleteness of the fossil record. -
The Effects of Natural Selection on Linkage Disequilibrium and Relative Fitness in Experimental Populations of Drosophila Melanogaster
THE EFFECTS OF NATURAL SELECTION ON LINKAGE DISEQUILIBRIUM AND RELATIVE FITNESS IN EXPERIMENTAL POPULATIONS OF DROSOPHILA MELANOGASTER GRACE BERT CANNON] Department of Zoology, Washington University, St. Louis, Missouri Received April 16, 1963 process of natural selection may be studied in laboratory populations in '?to ways. First, the genetic changes which occur during the course of micro- evolutionary change can be followed and, second, accompanying this, the size of the populations can be measured. CARSON(1961 ) considers the relative size of a population to be an important measure of relative population fitness when com- paring genetically different populations of the same species under uniform en- vironmental conditions over a period of time. In the present experiment, the experimental procedure of CARSONwas utilized to study the effects of selection on certain gene combinations and to measure the level of relative population fitness reached during the microevolutionary process. Experimental populations were constructed with certain oligogenes in low fre- quency and in certain associations in order to provide a situation likely to be changed by natural selection. Specifically, oligogenes on the third chromosome were allowed to recombine freely with the homologous Oregon chromosome so that three separate blocks could be selected for introduction into homozygous Oregon populations. The introduction contained all five of the oligogenes. At intervals samples were re- moved from the populations and testcrossed to determine whether selection had favored the coupling or repulsion phases of these blocks. In addition, the fitness of the populations was measured. This paper will show first the changes in frequency of the various gene combi- nations which occurred in the three experimental populations.