Application of Positive Matrix Factorization in the Identification Of
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Genetic Variability and Divergence of Neutrodiaptomus Tumidus Kiefer 1937
Young et al. Zoological Studies 2014, 53:22 http://www.zoologicalstudies.com/content/53/1/22 RESEARCH ARTICLE Open Access Genetic variability and divergence of Neutrodiaptomus tumidus Kiefer 1937 (Copepoda: Calonida) among 10 subpopulations in the high mountain range of Taiwan and their phylogeographical relationships indicated by mtDNA COI gene Shuh-Sen Young1*, Yan-Ying Lee1 and Min-Yun Liu2 Abstract Background: In the mountain area of Taiwan, we investigated 10 subpopulations of Neutrodiaptomus tumidus Kiefer 1937 living in isolated alpine ponds or lakes. We used mitochondrial DNA cytochrome C oxidase subunit I (COI) sequence as molecular marker to investigate the population genetic structure and their phylogeographical relationships. Results: We obtained 179 sequences from 10 subpopulations and found 94 haplotypes. Nucleotide composition was AT-rich. Haplotype diversity (Hd) and nucleotide diversity (π) indicated significant genetic differences between subpopulations (Hd = 0.131 ~ 0.990; π = 0.0002 ~ 0.0084); genetic differentiation index (Fst) and gene flow index (Nm) also exhibited significant genetic diversification between subpopulations (Fst = 0.334 ~ 0.997; Nm =0~1).Using Tajima’s D and Fu and Li’s D*andF* as neutrality tests, we found that the nucleotide variation within the population was consistent with the neutral theory except in the JiaLuoHu subpopulation. The JiaLuoHu subpopulation significantly deviated from the neutral theory and was speculated to have experienced a bottleneck effect. According to the phylogenetic tree, these alpine lake subpopulations could be divided into four phylogroups (northern region, Xueshan group, central region, and southwestern region). Xueshan group contains one subpopulation, DuRongTan, which is a unique group relative to other groups. -
Taiwan Tourism Guide Book
2021 Taiwan Tourism Guide Book Brown Boulevard Taiwan, a Rare Verdant Gem inside the Tropic of Cancer Taiwan, the beautiful island on the Pacific Ocean, is a rare verdant gem among the countries that the Tropic of Cancer passes through. Taiwan’s area accounts for only 0.03% of the world’s total area. However, Taiwan contains substantial natural resources. Continuous tectonic movements have created coastlines, basins, plains, rolling hills, valleys, and majestic peaks for the island and made it abundantly endow with mountains; over 200 of its peaks are more than 3,000 meters high, making it geographically unique. The varied terrains and landforms bring Taiwan diverse ecosystems, including tropical, sub-tropical and mountain temperate climates, as well as more than 3,000 endemic species of wildlife on the island, such as Formosan landlocked salmon, Formosan macaque, Formosan black bear, Swinhoe’s blue pheasant, etc. Such exuberant vitality makes Taiwan one of the most important wildlife conservation areas in the world. Traveling in Taiwan is refreshingly convenient. Nowadays, through convenient railway and high- way transportation, one can easily appreciate spectacular coastline, plain and mountain views within an hour while experience natural land- scapes of tropical, subtropical, temperate and cold climates; one can also easily travel the island from north to south and from west to east within a day while running through the scenic and cul- tural beauty of Taiwan. Taiwan’s diverse ethnic groups infuse a splen- did cultural ambience to the land. Aboriginal tribes, Taiwanese, Hakka, and new immigrant cultures all have their unique charms individually and perform in the as- pects of festival, weaving, craft, music, and architecture. -
A Comparative Phylogeographic Study Reveals Discordant Evolutionary
A comparative phylogeographic study reveals discordant evolutionary histories of alpine ground beetles (Coleoptera, Carabidae) Yi-Ming Weng, Man-Miao Yang & Wen-Bin Yeh Department of Entomology, National Chung Hsing University, 250 Kuo-Kuang Rd, South District, Taichung, Taiwan 40227 Keywords Abstract Glacial refugia, Leistus, massif de refuge, Nebria, nunatak hypothesis. Taiwan, an island with three major mountain ranges, provides an ideal topogra- phy to study mountain–island effect on organisms that would be diversified in Correspondence the isolation areas. Glaciations, however, might drive these organisms to lower Wen-Bin Yeh, 250 Kuo-Kuang Rd, South elevations, causing gene flow among previously isolated populations. Two District, Taichung, Taiwan 40224. hypotheses have been proposed to depict the possible refugia for alpine organ- Tel: +886-4-22840799 ext. 558 isms during glaciations. Nunatak hypothesis suggests that alpine species might Fax: +886-4-22875024 have stayed in situ in high mountain areas during glaciations. Massif de refuge, E-mail: [email protected] on the other hand, proposes that alpine species might have migrated to lower Funding Information ice-free areas. By sampling five sympatric carabid species of Nebria and Leistus, No funding information provided. and using two mitochondrial genes and two nuclear genes, we evaluated the mountain–island effect on alpine carabids and tested the two proposed Received: 17 September 2015; Revised: 3 hypotheses with comparative phylogeographic method. Results from the phylo- January 2016; Accepted: 18 January 2016 genetic relationships, network analysis, lineage calibration, and genetic structure indicate that the deep divergence among populations in all L. smetanai, N. for- mosana, and N. -
Yilan City, Taiwan
Whole City Award 2011 Abstract of Yilan County, Republic of China (Taiwan) The Population:459,349(Whole City Submission Category E) Yilan County is located to the northeast of Taiwan, covering an area of about 2,143 square kilometers. Slightly triangular in shape, it is girt by mountains and hemmed in between the Xueshan Range and the Central Mountain Range, whilst facing the Pacific Ocean on the East. Prosperous and modern, Yilan commands a highly concentrated population. Since the opening of the Xueshan Tunnel in June 2006, it now takes only 40 minutes to cover the distance from Yilan to Taipei, providing even more ease and convenience of access. 1. Natural and Cultural Landscape Improvement Indicators In 1997, the Yilan County Government resorted to the collaborative force of community involvement and ecological engineering technology to build the Yilan Riverside Park, which winds around the Yilan City. In the times preceding 1975, the zigzag Dongshan River was prone to disastrous flooding every year. Ever since the widening and straightening of the river, the flood situation has vastly improved. In 1980, a Forest Park was planned for the upper reach of the Dongshan River, a Water Park for the midstream, and a Waterfront Park at the downstream, which turned the Dongshan River area into a water eco-tourism model. There were many wetlands and protected areas for wetlands waterfowls. In 1993, through the efforts of conservationists from local bird protection society, a sanctuary for tailless birds was planned for the area. 2. Arts, Culture and Heritage Yilan County actively preserve the unique features and characteristics of Yilan’s local culture and that of its surrounding regions by the guiding principles of encouraging cultural pluralism and diversity, with an emphasis on folk and local cultures. -
Subspecific Differentiation Events of Montane Stag Beetles (Coleoptera, Lucanidae) Endemic to Formosa Island
RESEARCH ARTICLE Subspecific Differentiation Events of Montane Stag Beetles (Coleoptera, Lucanidae) Endemic to Formosa Island Cheng-Lung Tsai, Wen-Bin Yeh* Department of Entomology, National Chung Hsing University, Taichung, Taiwan * [email protected] a11111 Abstract Taxonomic debates have been carrying on for decades over Formosan stag beetles, which consist of a high proportion of endemic species and subspecies featuring morphological variations associated with local adaptation. With the influence of periodical Pleistocene gla- OPEN ACCESS ciations and the presence of several mountain ranges, the genetic differentiation and taxo- nomic recognition, within this medium-size island, of two endemic subspecies for each of Citation: Tsai C-L, Yeh W-B (2016) Subspecific Differentiation Events of Montane Stag Beetles four montane stag beetles, i.e. Lucanus ogakii, L. kanoi, Prismognathus davidis, and Neolu- (Coleoptera, Lucanidae) Endemic to Formosa Island. canus doro, has been an appealing issue. Based on monophyletic lineages and population PLoS ONE 11(6): e0156600. doi:10.1371/journal. structure, possible divergent scenarios have been proposed to clarify the subspecific status pone.0156600 for each of the above mentioned stag beetles. Phylogenetic inferences based on COI+16S Editor: Tzen-Yuh Chiang, National Cheng-Kung rDNA+28S rDNA of 240 Formosan lucanids have confirmed most species are monophyletic University, TAIWAN groups; and the intraspecific (<2%) and interspecific (>2%) genetic distances of the two Received: November 30, 2015 mitochondrial genes could be applied concordantly for taxonomic identification. On account Accepted: May 17, 2016 of Bayesian-based species delimitation, geographic distribution, population structure, and Published: June 3, 2016 sequence divergences, the subspecific status for L.