Open-Pollinated Vs. Hybrid Maize Cultivars
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Purebred Dog Breeds Into the Twenty-First Century: Achieving Genetic Health for Our Dogs
Purebred Dog Breeds into the Twenty-First Century: Achieving Genetic Health for Our Dogs BY JEFFREY BRAGG WHAT IS A CANINE BREED? What is a breed? To put the question more precisely, what are the necessary conditions that enable us to say with conviction, "this group of animals constitutes a distinct breed?" In the cynological world, three separate approaches combine to constitute canine breeds. Dogs are distinguished first by ancestry , all of the individuals descending from a particular founder group (and only from that group) being designated as a breed. Next they are distinguished by purpose or utility, some breeds existing for the purpose of hunting particular kinds of game,others for the performance of particular tasks in cooperation with their human masters, while yet others owe their existence simply to humankind's desire for animal companionship. Finally dogs are distinguished by typology , breed standards (whether written or unwritten) being used to describe and to recognize dogs of specific size, physical build, general appearance, shape of head, style of ears and tail, etc., which are said to be of the same breed owing to their similarity in the foregoing respects. The preceding statements are both obvious and known to all breeders and fanciers of the canine species. Nevertheless a correct and full understanding of these simple truisms is vital to the proper functioning of the entire canine fancy and to the health and well being of the animals which are the object of that fancy. It is my purpose in this brief to elucidate the interrelationship of the above three approaches, to demonstrate how distortions and misunderstandings of that interrelationship now threaten the health of all of our dogs and the very existence of the various canine breeds, and to propose reforms which will restore both balanced breed identity and genetic health to CKC breeds. -
Pedigree Analysis and Optimisation of the Breeding Programme of the Markiesje and the Stabyhoun
Pedigree analysis and optimisation of the breeding programme of the Markiesje and the Stabyhoun Aiming to improve health and welfare and maintain genetic diversity Harmen Doekes REG.NR.: 920809186050 Major thesis Animal Breeding and Genetics (ABG-80436) January, 2016 Supervisors/examiners: Piter Bijma - Animal Breeding and Genomics Centre, Wageningen University Kor Oldenbroek - Centre for Genetic Resources the Netherlands (CGN), Wageningen UR Jack Windig - Animal Breeding & Genomics Centre, Wageningen UR Livestock Research Thesis: Animal Breeding and Genomics Centre Pedigree analysis and optimisation of the breeding programme of the Markiesje and the Stabyhoun Aiming to improve health and welfare and maintain genetic diversity Harmen Doekes REG.NR.: 920809186050 Major thesis Animal Breeding and Genetics (ABG-80436) January, 2016 Supervisors: Kor Oldenbroek - Centre for Genetic Resources the Netherlands (CGN), Wageningen UR Jack Windig - Animal Breeding & Genomics Centre, Wageningen UR Livestock Research Examiners: Piter Bijma - Animal Breeding and Genomics Centre, Wageningen University Kor Oldenbroek - Centre for Genetic Resources the Netherlands (CGN), Wageningen UR Commissioned by: Nederlandse Markiesjes Vereniging Nederlandse Vereniging voor Stabij- en Wetterhounen Preface This major thesis is submitted in partial fulfilment of the requirements for the degree of Master of Animal Sciences of Wageningen University, the Netherlands. It comprises an unpublished study on the genetic status of two Dutch dog breeds, the Markiesje and the Stabyhoun. that was commissioned by the Breed Clubs of the breeds, the ‘Nederlandse Markiesjes Vereniging’ and the ‘Nederlandse Vereniging voor Stabij- en Wetterhounen’. It was written for readers with limited pre-knowledge. Although the thesis focusses on two breeds, it addresses issues that are found in many dog breeds. -
The Ghost of Outcrossing Past in Downy Brome, an Inbreeding Annual Grass
Journal of Heredity 2013:104(4):476–490 Published by Oxford University Press on behalf of The American Genetic doi:10.1093/jhered/est019 Association 2013. This work is written by (a) US Government employee(s) Advance Access publication April 5, 2013 and is in the public domain in the US. The Ghost of Outcrossing Past in Downy Brome, an Inbreeding Annual Grass SUSAN E. MEYER, SUDEEP GHIMIRE, SAMUEL DECKER, KEITH R. MERRILL, AND CRAIG E. COLEMAN From the Shrub Sciences Laboratory, US Forest Service, Rocky Mountain Research Station, 735 North 500 East, Provo, UT 84606 (Meyer); Department of Plant and Wildlife Sciences, Brigham Young University, Provo, UT (Ghimire, Decker, and Coleman); and Center for Plant Breeding and Applied Plant Genomics, North Carolina State University, Raleigh, NC (Merrill). Address correspondence to Susan Meyer at the address above, or e-mail: [email protected] Abstract We investigated the frequency of outcrossing in downy brome (Bromus tectorum L.), a cleistogamous weedy annual grass, in both common garden and wild populations, using microsatellite and single nucleotide polymorphic (SNP) markers. In the common garden study, 25 lines with strongly contrasting genotypes were planted in close proximity. We fingerprinted 10 seed progeny from 8 individuals of each line and detected 15 first-generation heterozygotes for a t-value (corrected for cryptic crosses) of 0.0082. Different genotypes were significantly overrepresented as maternal versus paternal parents of heterozy- gotes, suggesting gender–function-dependent genetic control of outcrossing rates. In 4 wild populations (>300 individuals each), expected heterozygosity ranged from 0.149 to 0.336, whereas t-values ranged from 0.0027 to 0.0133, indicating high levels of both genetic diversity and inbreeding. -
Estimation of Breed-Specific Heterosis Effects for Birth, Weaning and Yearling Weight in Cattle…………………………………………………………………….…………………………………..…………………32
University of Nebraska - Lincoln DigitalCommons@University of Nebraska - Lincoln Theses and Dissertations in Animal Science Animal Science Department 7-2014 Estimation of Breed-Specific etH erosis Effects for Birth, Weaning and Yearling Weight in Cattle Lauren N. Schiermiester University of Nebraska-Lincoln, [email protected] Follow this and additional works at: http://digitalcommons.unl.edu/animalscidiss Part of the Animal Sciences Commons Schiermiester, Lauren N., "Estimation of Breed-Specific eH terosis Effects for Birth, Weaning and Yearling Weight in Cattle" (2014). Theses and Dissertations in Animal Science. 94. http://digitalcommons.unl.edu/animalscidiss/94 This Article is brought to you for free and open access by the Animal Science Department at DigitalCommons@University of Nebraska - Lincoln. It has been accepted for inclusion in Theses and Dissertations in Animal Science by an authorized administrator of DigitalCommons@University of Nebraska - Lincoln. ESTIMATION OF BREED-SPECIFIC HETEROSIS EFFECTS FOR BIRTH, WEANING AND YEARLING WEIGHT IN CATTLE. By Lauren N. Schiermiester A THESIS Presented to the Faculty of The GraDuate College at the University of Nebraska In Partial Fulfillment of Requirements For the Degree of Master of Science Major: Animal Science Under the Supervision of Professor Matthew L. Spangler Lincoln, Nebraska July, 2014 ESTIMATION OF BREED-SPECIFIC HETEROSIS EFFECTS FOR BIRTH, WEANING AND YEARLING WEIGHT IN CATTLE. Lauren N. Schiermiester, M.S. University of Nebraska, 2014 ADvisor: Matthew L. SPangler Genetic selection Decisions are imPortant components of improveD beef ProDuction efficiency. ExPloiting heterosis anD breeD comPlementarity can improve economically relevant traits anD system efficiency. The objective of the current stuDy was to estimate breeD-sPecific heterosis for the seven largest beef breeDs (accorDing to registrations) for birth, weaning anD yearling weight. -
Developement of the Heterosis Concept
H. K. HAYES University of Minnesota Chapter 3 Development of the Heterosis Concept Hybrid vigor in artificial plant hybrids was first studied by Koelreuter in 1763 (East and Hayes, 1912). The rediscovery of Mendel's Laws in 1900 focused the attention of the biological world on problems of heredity and led to renewed interest in hybrid vigor as one phase of quantitative inheritance. Today it is accepted that the characters of plants, animals, and human beings are the result of the action, reaction, and interaction of countless numbers of genes. What is inherited, however, is not the character but the manner of reaction under conditions of environment. At this time, when variability is being expressed as genetic plus environmental variance, one may say that genetic variance is the expression of variability due to geno typic causes. It is that part of the total variance that remains after eliminat ing environmental variance, as estimated from studying the variances of homozygous lines and F 1 crosses between them. Early in the present century, East, at the Connecticut Agricultural Ex periment Station, and G. H. Shull at Cold Spring Harbor, started their studies of the effects of cross- and self-fertilization in maize. The writer has first-hand knowledge of East's work in this field as he became East's assist ant in July, 1909, and continued to work with him through 1914. In 1909, East stated that studies of the effects of self- and cross-pollination in maize were started with the view that this type of information was essential to a sound method of maize breeding. -
<I>Steinernema Carpocapsae
University of Nebraska - Lincoln DigitalCommons@University of Nebraska - Lincoln U.S. Department of Agriculture: Agricultural Publications from USDA-ARS / UNL Faculty Research Service, Lincoln, Nebraska 2011 Outcrossing and crossbreeding recovers deteriorated traits in laboratory cultured Steinernema carpocapsae nematodes John M. Chaston Brigham Young University Adler R. Dillman Brigham Young University David I. Shapiro-Ilan USDA-ARS Anwar L. Bilgrami Rutgers University Randy Gaugler Rutgers University See next page for additional authors Follow this and additional works at: https://digitalcommons.unl.edu/usdaarsfacpub Part of the Agricultural Science Commons Chaston, John M.; Dillman, Adler R.; Shapiro-Ilan, David I.; Bilgrami, Anwar L.; Gaugler, Randy; Hopper, Keith R.; and Adams, Byron J., "Outcrossing and crossbreeding recovers deteriorated traits in laboratory cultured Steinernema carpocapsae nematodes" (2011). Publications from USDA-ARS / UNL Faculty. 842. https://digitalcommons.unl.edu/usdaarsfacpub/842 This Article is brought to you for free and open access by the U.S. Department of Agriculture: Agricultural Research Service, Lincoln, Nebraska at DigitalCommons@University of Nebraska - Lincoln. It has been accepted for inclusion in Publications from USDA-ARS / UNL Faculty by an authorized administrator of DigitalCommons@University of Nebraska - Lincoln. Authors John M. Chaston, Adler R. Dillman, David I. Shapiro-Ilan, Anwar L. Bilgrami, Randy Gaugler, Keith R. Hopper, and Byron J. Adams This article is available at DigitalCommons@University of Nebraska - Lincoln: https://digitalcommons.unl.edu/ usdaarsfacpub/842 International Journal for Parasitology 41 (2011) 801–809 Contents lists available at ScienceDirect International Journal for Parasitology journal homepage: www.elsevier.com/locate/ijpara Outcrossing and crossbreeding recovers deteriorated traits in laboratory cultured Steinernema carpocapsae nematodes John M. -
Applications of Inbreeding and Out-Breeding; Genetic Basis of Heterosis 1St Semester
Applications of inbreeding and out-breeding; Genetic basis of heterosis 1st Semester Applications of inbreeding and out-breeding; Genetic basis of heterosis (hybrid vigour) Reproduction is the most important biological function that is performed by the living species. Many reproductive mechanisms have come into function, such as asexual reproduction, sexual reproduction and vegetative reproduction, etc. The most important of these is the sexual reproduction, probably due to the fact that sexual reproduction involves the genic recombination, and nature selects most suitable recombinations out of these. Thus, sexual reproduction may be of many forms, i.e., hermophroditism, crossing of individuals which are not closely related, inbreeding or self-fertilization etc. Thus systems of matting encountered in natural as well as man controlled populations of organisms can be divided under two headings:- 1. Inbreeding or matting among closely related forms. 2. Outbreeding or matting among Unrelated forms. 1. Inbreeding Definition of inbreeding: The process of mating among closely related individuals is known as inbreeding. There can be different degrees of inbreeding. The self fertilization in plants as in peas and beans is a example of inbreeding. In 1903 Johannsen recognized the uniformity that characterized self fertilizing plants grown in the same environment. He called such fertilizing populations as pure lines which breed true without appreciable genetic variation. The cross fertilization in plants and animals affords different degrees of inbreeding based relationship. For example, marriages between brothers and sisters, between the first cousins and second cousins are example showing different degrees of inbreeding.Artificial selection always accompany close inbreeding for the betterment of plants and animals both. -
Let's Talk Linebreeding
Course #304 Dog Breeding Basenji University “Preserving Our Past and Educating Our Future” Let’s Talk Linebreeding Claudia Waller Orlandi, Ph.D. Claudia Waller Orlandi, Ph.D. has been in dogs for 40 years and is well known for her Topsfield Bassets. She was 2009 AKC Breeder of the Year. She has a background in education. She writes and lectures frequently. Copyright by the author From Tally Ho. July-August 1997 One of the most bandied about terms among Basset Hound breeders today seems to be linebreeding. Despite its widespread use, however, linebreeding is frequently misunderstood and miscommunicated; in fact, it is not altogether uncommon for an outcrossed pedigree to be mistakenly viewed as linebreeding by the novice. The present discussion defines linebreeding and how we can more accurately describe our linebred litters. LINEBREEDING AND INBREEDING: A FAMILY AFFAIR INBREEDING and LINEBREEDING involve the mating of animals within the same family. Breeding relatives is used to cement traits, the goal being to make the offspring homozygous (pure) for desirable characteristics. Homozygous dogs tend to be prepotent and produce offspring that look like themselves (Walkowicz & Wilcox 1994). Willis (1989) defines INBREEDING as the mating of animals "more closely related to one another than the average relationship within the breed." Inbred pairings would include brother/sister (the closest form), father/daughter, mother/son and half-brother/half-sister. LINEBREEDING involves breeding relatives other than the individual parents or brothers and sisters. Typical linebred matings are grandfather/granddaughter, grandmother/grandson, grandson/granddaughter, great-granddaughter/great-grandson, uncle/niece, aunt/nephew and cousin crosses. -
Heterosis from Local Drift Load Is Likely Insufficient to Favor Reversions To
bioRxiv preprint doi: https://doi.org/10.1101/273946; this version posted February 28, 2018. The copyright holder for this preprint (which was not certified by peer review) is the author/funder, who has granted bioRxiv a license to display the preprint in perpetuity. It is made available under aCC-BY-NC-ND 4.0 International license. Heterosis from local drift load is likely insufficient to favor reversions to outcrossing Abstract 2 The evolutionary trajectory from cross- to self-fertilization is widely documented in nature, but re- sults from several taxa also suggest that outcrossing may evolve in a formerly selfing population. Pop- 4 ulation genetic theory explains that selfing can evolve when its advantages overcome its immediate cost of inbreeding depression, but that this process will not run in reverse because a self-fertilizing population 6 purges itself of inbreeding depression. That is, the primary short-term advantage of cross-fertilization over self-fertilization depends on the existence of deleterious alleles exposed upon inbreeding. Here, 8 we explore whether outcrossing can evolve in selfing populations if allelic variation exists as divergence among populations. We consider two monomorphic populations of entirely self-fertilizing individuals, 10 introduce a modifier allele that increases the rate of cross-fertilization, and investigate whether the het- erosis among populations is sufficient for the modifier to invade and fix. We find that, despite an initial 12 increase in the frequency of the outcrossing modifier, its fixation is possible only when populations har- bor extremely large unique fixed genetic loads. These rare reversions to outcrossing become more likely 14 as the load becomes more polygenic, or when the modifier appears on a rare background, such as by dispersal of an outcrossing genotype into a selfing population. -
An Analysis of Heterosis Vs. Inbreeding Effects with an Autotetraploid Cross-Fertilized Plant: Medicago Satna L
Copyright 0 1984 by the Genetics Society of America AN ANALYSIS OF HETEROSIS VS. INBREEDING EFFECTS WITH AN AUTOTETRAPLOID CROSS-FERTILIZED PLANT: MEDICAGO SATNA L. A. GALLAIS' Station d 'A,nelioration des Plantes Fourrageres I.N.R.A., 86600 Lusignan, France Manuscript received March 4, 1982 Revised copy accepted August 1, 1983 ABSTRACT Self-fertilization and crossing were combined to produce a large number of levels of inbreeding and of degrees of kinship. The inbreeding effect increases with the complexity of the character and with its supposed relationship with fitness. A certain amount of heterozygosity appears to be necessary for the expression of variability. With crossing of unrelated noninbred plants, genetic variance is mainly additive, but with inbreeding its major part is nonadditive. High additivity in crossing, therefore, coexists with strong inbreeding depres- sion. However, even in inbreeding the genetic coefficient of covariation among relatives appears to be strongly and linearly related to the classical coefficient of kinship. This means that deviations from the additive model with inbreeding could be partly due to an effect of inbreeding on variances through an effect on means. An attempt to analyze genetic effects from a theoretical model, based upon the identity by descent relationship at the level of means and of covariances between relatives, tends to show that allelic interactions are more important and nonallelic interactions are less important for a character closely related to fitness. For a complex character, these results lead to the conception of a genome organized in polygenic complementary blocks integrating epistasis and dominance. Some consequences for plant breeding are also discussed. -
The Genetic Basis of Heterosis: Multiparental Quantitative Trait Loci
INVESTIGATION The Genetic Basis of Heterosis: Multiparental Quantitative Trait Loci Mapping Reveals Contrasted Levels of Apparent Overdominance Among Traits of Agronomical Interest in Maize (Zea mays L.) A. Larièpe,*,† B. Mangin,‡ S. Jasson,‡ V. Combes,* F. Dumas,* P. Jamin,* C. Lariagon,* D. Jolivot,* D. Madur,* J. Fiévet,* A. Gallais,* P. Dubreuil,† A. Charcosset,*,1 and L. Moreau* *UMR de Génétique Végétale, INRA–Univ Paris-Sud–CNRS–AgroParisTech Ferme du Moulon, F-91190 Gif-sur-Yvette, France, †BIOGEMMA, Genetics and Genomics in Cereals, 63720 Chappes, France, and ‡INRA, Unité de Biométrie et Intelligence Artificielle, 31326 Castanet-Tolosan, France ABSTRACT Understanding the genetic bases underlying heterosis is a major issue in maize (Zea mays L.). We extended the North Carolina design III (NCIII) by using three populations of recombinant inbred lines derived from three parental lines belonging to different heterotic pools, crossed with each parental line to obtain nine families of hybrids. A total of 1253 hybrids were evaluated for grain moisture, silking date, plant height, and grain yield. Quantitative trait loci (QTL) mapping was carried out on the six families obtained from crosses to parental lines following the “classical” NCIII method and with a multiparental connected model on the global design, adding the three families obtained from crosses to the nonparental line. Results of the QTL detection highlighted that most of the QTL detected for grain yield displayed apparent overdominance effects and limited differences between heterozygous genotypes, whereas for grain moisture predominance of additive effects was observed. For plant height and silking date results were intermediate. Except for grain yield, most of the QTL identified showed significant additive-by-additive epistatic interactions. -
The Genetic Diversity of Triticale Genotypes Involved in Polish Breeding Programs Agnieszka Niedziela, Renata Orłowska, Joanna Machczyńska and Piotr T
Niedziela et al. SpringerPlus (2016) 5:355 DOI 10.1186/s40064-016-1997-8 RESEARCH Open Access The genetic diversity of triticale genotypes involved in Polish breeding programs Agnieszka Niedziela, Renata Orłowska, Joanna Machczyńska and Piotr T. Bednarek* Abstract Genetic diversity analysis of triticale populations is useful for breeding programs, as it helps to select appropriate genetic material for classifying the parental lines, heterotic groups and predicting hybrid performance. In our study 232 breeding forms were analyzed using diversity arrays technology markers. Principal coordinate analysis followed by model-based Bayesian analysis of population structure revealed the presence of weak data structuring with three groups of data. In the first group, 17 spring and 17 winter forms were clustered. The second and the third groups were represented by 101 and 26 winter forms, respectively. Polymorphic information content values, as well as Shannon’s Information Index, were higher for the first (0.319) and second (0.309) than for third (0.234) group. AMOVA analysis demonstrated a higher level of within variation (86 %) than among populations (14 %). This study provides the basic information on the presence of structure within a genetic pool of triticale breeding forms. Keywords: Triticale, Genetic diversity, DArT markers Background From this achievement to the first hexaploid triticales Triticale (X Triticosecale Wittmack) is a synthetic cereal (Triticale No. 57 and Triticale No. 64) obtained by Hun- crop that originated from a cross between Triticum spe- garian breeder Kiss and released for commercial pro- cies (AABB or AABBDD) and Secale cereale L. (RR). duction passed almost 100 years (Kiss 1971).