Aspects of Honeybush Tea (Cyclopia Species) Propagation
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Genetic Marker Resources for Application in Cyclopia Species
Genetic marker resources for application in Cyclopia species by Marioné Niemandt Thesis presented in fulfilment of the requirements for the degree of Master of Science in the Faculty of AgriSciences at Stellenbosch University Supervisors: Prof Rouvay Roodt-Wilding and Dr Cecilia Bester Co-supervisor: Mr Kenneth Tobutt December 2016 Stellenbosch University https://scholar.sun.ac.za Declaration By submitting this thesis electronically, I declare that the entirety of the work contained therein is my own, original work, that I am the sole author thereof (save to the extent explicitly otherwise stated), that reproduction and publication thereof by Stellenbosch University will not infringe any third party rights and that I have not previously in its entirety or in part submitted it for obtaining any qualification. December 2016 Copyright © 2016 Stellenbosch University All rights reserved i Stellenbosch University https://scholar.sun.ac.za Abstract Cyclopia species are endemic to the Fynbos Biome of South Africa and have been utilised for many years as a health drink known as honeybush tea. Despite the commercial importance of Cyclopia, no molecular resources are available to characterise this genus. The polyploid nature furthermore limits the use of molecular markers as some species exhibit up to 14 sets of chromosomes (Cyclopia intermedia and Cyclopia meyeriana: 2n = 14x = 126). This study optimised a DNA extraction protocol for various Cyclopia species in order to obtain high quality DNA as the first crucial step during molecular genetic studies. The use of young, fresh leaves as starting material for DNA extraction presents a challenge when sampling from distant locations; therefore, a CTAB/NaCl buffer was optimised to preserve the leaves for up to two weeks prior to DNA extraction under laboratory conditions. -
Misgund Orchards
MISGUND ORCHARDS ENVIRONMENTAL AUDIT 2014 Grey Rhebok Pelea capreolus Prepared for Mr Wayne Baldie By Language of the Wilderness Foundation Trust In March 2002 a baseline environmental audit was completed by Conservation Management Services. This foundational document has served its purpose. The two (2) recommendations have been addressed namely; a ‘black wattle control plan’ in conjunction with Working for Water Alien Eradication Programme and a survey of the fish within the rivers was also addressed. Furthermore updated species lists have resulted (based on observations and studies undertaken within the region). The results of these efforts have highlighted the significance of the farm Misgund Orchards and the surrounds, within the context of very special and important biodiversity. Misgund Orchards prides itself with a long history of fruit farming excellence, and has strived to ensure a healthy balance between agricultural priorities and our environment. Misgund Orchards recognises the need for a more holistic and co-operative regional approach towards our environment and needs to adapt and design a more sustainable approach. The context of Misgund Orchards is significant, straddling the protected areas Formosa Forest Reserve (Niekerksberg) and the Baviaanskloof Mega Reserve. A formidable mountain wilderness with World Heritage Status and a Global Biodiversity Hotspot (See Map 1 overleaf). Rhombic egg eater Dasypeltis scabra MISGUND ORCHARDS Langkloof Catchment MAP 1 The regional context of Misgund Orchards becomes very apparent, where the obvious strategic opportunity exists towards creating a bridge of corridors linking the two mountain ranges Tsitsikamma and Kouga (south to north). The environmental significance of this cannot be overstated – essentially creating a protected area from the ocean into the desert of the Klein-karoo, a traverse of 8 biomes, a veritable ‘garden of Eden’. -
Oberholzeria (Fabaceae Subfam. Faboideae), a New Monotypic Legume Genus from Namibia
RESEARCH ARTICLE Oberholzeria (Fabaceae subfam. Faboideae), a New Monotypic Legume Genus from Namibia Wessel Swanepoel1,2*, M. Marianne le Roux3¤, Martin F. Wojciechowski4, Abraham E. van Wyk2 1 Independent Researcher, Windhoek, Namibia, 2 H. G. W. J. Schweickerdt Herbarium, Department of Plant Science, University of Pretoria, Pretoria, South Africa, 3 Department of Botany and Plant Biotechnology, University of Johannesburg, Johannesburg, South Africa, 4 School of Life Sciences, Arizona a11111 State University, Tempe, Arizona, United States of America ¤ Current address: South African National Biodiversity Institute, Pretoria, South Africa * [email protected] Abstract OPEN ACCESS Oberholzeria etendekaensis, a succulent biennial or short-lived perennial shrublet is de- Citation: Swanepoel W, le Roux MM, Wojciechowski scribed as a new species, and a new monotypic genus. Discovered in 2012, it is a rare spe- MF, van Wyk AE (2015) Oberholzeria (Fabaceae subfam. Faboideae), a New Monotypic Legume cies known only from a single locality in the Kaokoveld Centre of Plant Endemism, north- Genus from Namibia. PLoS ONE 10(3): e0122080. western Namibia. Phylogenetic analyses of molecular sequence data from the plastid matK doi:10.1371/journal.pone.0122080 gene resolves Oberholzeria as the sister group to the Genisteae clade while data from the Academic Editor: Maharaj K Pandit, University of nuclear rDNA ITS region showed that it is sister to a clade comprising both the Crotalarieae Delhi, INDIA and Genisteae clades. Morphological characters diagnostic of the new genus include: 1) Received: October 3, 2014 succulent stems with woody remains; 2) pinnately trifoliolate, fleshy leaves; 3) monadel- Accepted: February 2, 2015 phous stamens in a sheath that is fused above; 4) dimorphic anthers with five long, basifixed anthers alternating with five short, dorsifixed anthers, and 5) pendent, membranous, one- Published: March 27, 2015 seeded, laterally flattened, slightly inflated but indehiscent fruits. -
Applied Phylogeography of Cyclopia Intermedia (Fabaceae) Highlights the Need for ‘Duty of Care’ When Cultivating Honeybush
Applied phylogeography of Cyclopia intermedia (Fabaceae) highlights the need for `duty of care' when cultivating honeybush Nicholas C. Galuszynski and Alastair J. Potts Department of Botany, Nelson Mandela University, Port Elizabeth, Eastern Cape, South Africa ABSTRACT Background. The current cultivation and plant breeding of Honeybush tea (produced from members of Cyclopia Vent.) do not consider the genetic diversity nor structuring of wild populations. Thus, wild populations may be at risk of genetic contamination if cultivated plants are grown in the same landscape. Here, we investigate the spatial distribution of genetic diversity within Cyclopia intermedia E. Mey.—this species is widespread and endemic in the Cape Floristic Region (CFR) and used in the production of Honeybush tea. Methods. We applied High Resolution Melt analysis (HRM), with confirmation Sanger sequencing, to screen two non-coding chloroplast DNA regions (two fragments from the atpI-aptH intergenic spacer and one from the ndhA intron) in wild C. intermedia populations. A total of 156 individuals from 17 populations were analyzed for phylogeographic structuring. Statistical tests included analyses of molecular variance and isolation-by-distance, while relationships among haplotypes were ascertained using a statistical parsimony network. Results. Populations were found to exhibit high levels of genetic structuring, with 62.8% of genetic variation partitioned within mountain ranges. An additional 9% of genetic variation was located amongst populations within mountains, suggesting limited seed exchange among neighboring populations. Despite this phylogeographic Submitted 17 April 2020 structuring, no isolation-by-distance was detected (p > 0:05) as nucleotide variation Accepted 5 August 2020 among haplotypes did not increase linearly with geographic distance; this is not Published 2 September 2020 surprising given that the configuration of mountain ranges dictates available habitats Corresponding author and, we assume, seed dispersal kernels. -
Fruits and Seeds of Genera in the Subfamily Faboideae (Fabaceae)
Fruits and Seeds of United States Department of Genera in the Subfamily Agriculture Agricultural Faboideae (Fabaceae) Research Service Technical Bulletin Number 1890 Volume I December 2003 United States Department of Agriculture Fruits and Seeds of Agricultural Research Genera in the Subfamily Service Technical Bulletin Faboideae (Fabaceae) Number 1890 Volume I Joseph H. Kirkbride, Jr., Charles R. Gunn, and Anna L. Weitzman Fruits of A, Centrolobium paraense E.L.R. Tulasne. B, Laburnum anagyroides F.K. Medikus. C, Adesmia boronoides J.D. Hooker. D, Hippocrepis comosa, C. Linnaeus. E, Campylotropis macrocarpa (A.A. von Bunge) A. Rehder. F, Mucuna urens (C. Linnaeus) F.K. Medikus. G, Phaseolus polystachios (C. Linnaeus) N.L. Britton, E.E. Stern, & F. Poggenburg. H, Medicago orbicularis (C. Linnaeus) B. Bartalini. I, Riedeliella graciliflora H.A.T. Harms. J, Medicago arabica (C. Linnaeus) W. Hudson. Kirkbride is a research botanist, U.S. Department of Agriculture, Agricultural Research Service, Systematic Botany and Mycology Laboratory, BARC West Room 304, Building 011A, Beltsville, MD, 20705-2350 (email = [email protected]). Gunn is a botanist (retired) from Brevard, NC (email = [email protected]). Weitzman is a botanist with the Smithsonian Institution, Department of Botany, Washington, DC. Abstract Kirkbride, Joseph H., Jr., Charles R. Gunn, and Anna L radicle junction, Crotalarieae, cuticle, Cytiseae, Weitzman. 2003. Fruits and seeds of genera in the subfamily Dalbergieae, Daleeae, dehiscence, DELTA, Desmodieae, Faboideae (Fabaceae). U. S. Department of Agriculture, Dipteryxeae, distribution, embryo, embryonic axis, en- Technical Bulletin No. 1890, 1,212 pp. docarp, endosperm, epicarp, epicotyl, Euchresteae, Fabeae, fracture line, follicle, funiculus, Galegeae, Genisteae, Technical identification of fruits and seeds of the economi- gynophore, halo, Hedysareae, hilar groove, hilar groove cally important legume plant family (Fabaceae or lips, hilum, Hypocalypteae, hypocotyl, indehiscent, Leguminosae) is often required of U.S. -
<I>Cadia</I> and the Phylogeny of the Tribe Podalyrieae
Systematic Botany (2008), 33(1): pp. 133–147 © Copyright 2008 by the American Society of Plant Taxonomists Systematic Position of the Anomalous Genus Cadia and the Phylogeny of the Tribe Podalyrieae (Fabaceae) James S. Boatwright,1,4 Vincent Savolainen,2 Ben-Erik van Wyk,1 Anne Lise Schutte-Vlok,3 Félix Forest,2 and Michelle van der Bank1 1Department of Botany and Plant Biotechnology, University of Johannesburg, P.O. Box 524, Auckland Park 2006, Johannesburg, South Africa 2Jodrell Laboratory, Royal Botanic Gardens, Kew, Richmond, Surrey, TW9 3DS, U.K. 3CapeNature, Private Bag X658, Oudtshoorn, 6620, South Africa 4Author for correspondence ([email protected]) Communicating Editor: James F. Smith Abstract—Tribe Podalyrieae is a group of papilionoid legumes that are largely endemic to the Cape Floristic Region of South Africa, possessing fire survival strategies with both nonsprouting and sprouting species. A phylogenetic study of the tribe was undertaken using gene sequences obtained from the internal transcribed spacer (ITS) of nuclear ribosomal DNA as well as the plastid rbcL gene (107 species). Several clades were identified within the tribe. Subtribe Xiphothecinae consists of the genera Amphithalea and Xiphotheca. Subtribe Podalyrii- nae was paraphyletic. Based on the results of this study, Liparia (except L. calycina) and Podalyria are sister genera with Stirtonanthus sister to both of these. While Podalyria and Stirtonanthus are monophyletic, the monophyly of Liparia is still uncertain. Virgilia and Calpurnia are closely related and Cyclopia retains an isolated, monophyletic position within the tribe. Cadia is monophyletic and sister to the rest of the Podalyrieae. The placement of this genus has, until now, been uncertain due to their actinomorphic flowers that are unusual among papilionoid legumes. -
A Phylogeny of Legumes (Leguminosae) Based on Analysis of the Plastid Matk Gene Resolves Many Well-Supported Subclades Within the Family1
American Journal of Botany 91(11): 1846±1862. 2004. A PHYLOGENY OF LEGUMES (LEGUMINOSAE) BASED ON ANALYSIS OF THE PLASTID MATK GENE RESOLVES MANY WELL-SUPPORTED SUBCLADES WITHIN THE FAMILY1 MARTIN F. W OJCIECHOWSKI,2,5 MATT LAVIN,3 AND MICHAEL J. SANDERSON4 2School of Life Sciences, Arizona State University, Tempe, Arizona 85287-4501 USA; 3Department of Plant Sciences, Montana State University, Bozeman, Montana 59717 USA; and 4Section of Evolution and Ecology, University of California, Davis, California 95616 USA Phylogenetic analysis of 330 plastid matK gene sequences, representing 235 genera from 37 of 39 tribes, and four outgroup taxa from eurosids I supports many well-resolved subclades within the Leguminosae. These results are generally consistent with those derived from other plastid sequence data (rbcL and trnL), but show greater resolution and clade support overall. In particular, the monophyly of subfamily Papilionoideae and at least seven major subclades are well-supported by bootstrap and Bayesian credibility values. These subclades are informally recognized as the Cladrastis clade, genistoid sensu lato, dalbergioid sensu lato, mirbelioid, millettioid, and robinioid clades, and the inverted-repeat-lacking clade (IRLC). The genistoid clade is expanded to include genera such as Poecilanthe, Cyclolobium, Bowdichia, and Diplotropis and thus contains the vast majority of papilionoids known to produce quinolizidine alkaloids. The dalbergioid clade is expanded to include the tribe Amorpheae. The mirbelioids include the tribes Bossiaeeae and Mirbelieae, with Hypocalypteae as its sister group. The millettioids comprise two major subclades that roughly correspond to the tribes Millettieae and Phaseoleae and represent the only major papilionoid clade marked by a macromorphological apomorphy, pseu- doracemose in¯orescences. -
Honeybush (Cyclopia Spp.): from Local Cottage Industry to Global Markets — the Catalytic and Supporting Role of Research ⁎ E
Available online at www.sciencedirect.com South African Journal of Botany 77 (2011) 887–907 www.elsevier.com/locate/sajb Review Honeybush (Cyclopia spp.): From local cottage industry to global markets — The catalytic and supporting role of research ⁎ E. Joubert a,b, , M.E. Joubert c, C. Bester d, D. de Beer a, J.H. De Lange d,e,1 a Post-Harvest and Wine Technology, ARC (Agricultural Research Council of South Africa) Infruitec-Nietvoorbij, Private Bag X5026, Stellenbosch 7599, South Africa b Department of Food Science, Stellenbosch University, Private Bag X1, Matieland (Stellenbosch) 7602, South Africa c Soil and Water Science, ARC (Agricultural Research Council of South Africa) Infruitec-Nietvoorbij, Private Bag X5026, Stellenbosch 7599, South Africa d Cultivar Development Division, ARC (Agricultural Research Council of South Africa) Infruitec-Nietvoorbij, Private Bag X5026, Stellenbosch 7599, South Africa e South African National Biodiversity Institute (previously National Botanical Institute), Kirstenbosch, Private Bag X7, Claremont (Cape Town) 7735, South Africa Received 11 April 2011; received in revised form 24 May 2011; accepted 24 May 2011 Abstract Honeybush tea (Cyclopia spp.), one of the traditional South African herbal teas with a long history of regional use, remained a cottage industry until the mid-1990s when researchers were instrumental in the development of a formal agricultural and agro-processing industry. It is one of the few indigenous South African plants that made the transition from the wild to a commercial product during the past 100 years. Research activities during the past 20 years included propagation, production, genetic improvement, processing, composition and the potential for value-adding. -
Characterisation of the Sensory Profile of Cyclopia Intermedia and Optimisation of Fermentation Parameters for Improved Product Quality
Characterisation of the sensory profile of Cyclopia intermedia and optimisation of fermentation parameters for improved product quality By Alexandra Jane Bergh Thesis presented in partial fulfilment of the requirements for the degree of Master of Science in Food Science Department of Food Science, Faculty of AgriSciences, Stellenbosch University Supervisor: Prof E. Joubert ARC Infruitec-Nietvoorbij, Stellenbosch Co-supervisor: M. Muller Department of Food Science, Stellenbosch University December 2014 Stellenbosch University http://scholar.sun.ac.za DECLARATION By submitting this thesis electronically, I declare that the entirety of the work contained therein is my own, original work, that I am the sole author thereof (save to the extent explicitly otherwise stated), that reproduction and publication thereof by Stellenbosch University will not infringe any third party rights and that I have not previously in its entirety or in part submitted it for obtaining any qualification. Alexandra Jane Bergh December 2014 Copyright © 2014 Stellenbosch University All rights reserved i Stellenbosch University http://scholar.sun.ac.za ABSTRACT In light of the limited and inconsistent supply of good quality honeybush tea, a species-specific sensory profile and the physicochemical characteristics of Cyclopia intermedia (honeybush) tea were determined to ultimately establish the optimum fermentation parameters for this herbal tea on laboratory-scale and to validate these findings on commercial-scale. The characteristic sensory profile of C. intermedia can be described as sweet tasting and slightly astringent with a combination of “fynbos-floral”, “fynbos-sweet”, “fruity” (specifically “apricot jam”, “cooked apple”, “raisin” and “lemon/lemon grass”), “woody”, “caramel/ vanilla” and “honey-like” aromas. The flavour can be described as distinctly “fynbos-floral”, “fynbos-sweet” and “woody”, including hints of “lemon/lemon grass” and “hay/dried grass”. -
The Implications of Fynbos Ecology for Cyclopia Species
THE IMPLICATIONS OF FYNBOS ECOLOGY FOR CYCLOPIA SPECIES EADP 696: THE DEVELOPMENT OF GUIDELINES FOR THE SUSTAINABLE HARVESTING OF WILD HONEYBUSH DATE: MARCH 2017 AUTHOR: GILLIAN MCGREGOR PROJECT MANAGER: ALBERT ACKHURST, HEAD OF COMPONENT: BIODIVERSITY MANAGEMENT, DEPARTMENT OF ENVIRONMENTAL AFFAIRS AND DEVELOPMENT PLANNING SERVICE PROVIDER: CAROLINE GELDERBLOM CONSULTING ACKNOWLEDGEMENTS: • Prof. Richard Cowling and Dr S. Pierce Cowling who generously shared their extensive knowledge of the fynbos. • Jan Vlok, Dr Annelise Schutte-Vlok CITATION: McGregor, G.K. (2017). Ecological Review: Fynbos ecology and its implications for Cyclopia species. Department of Environmental Affairs and Development Planning, Cape Town. 1. A REVIEW OF FYNBOS AND CYCLOPIA SPECIES ECOLOGY 2 1.1 Fynbos ecology 2 1.2 Rainfall 3 1.3 Fire 3 1.4 Growth form: reseeders and resprouters 4 2. ECOLOGY OF CYCLOPIA INTERMEDIA 5 2.1 Botanical description of C. intermedia 5 2.2 Conservation status of C. intermedia 6 2.3 Phenology 7 2.3.1 Phenophases of C. intermedia 7 2.3.2 Fire and its effect on growth, flowering and seed production 10 2.4 Plant maturity 10 3. REFERENCES 10 LIST OF TABLES Table 1: Illustration of phenophases of C. intermedia 8 LIST OF FIGURES Figure 1: The fynbos biome and the distribution of the five commercially important wild harvested Cyclopia species. The map also shows the extent of protected areas in the study area. 2 Figure 2: Rainfall seasonality across the distribution range of the five commercially important wild harvested Cyclopia species (based on data from Schulze, 2007). 3 Figure 3: Fire return intervals for the study area, based on MODIS data which is only available for a 15 year period 2002 to 2016. -
Reconstructing the Deep-Branching Relationships of the Papilionoid Legumes
SAJB-00941; No of Pages 18 South African Journal of Botany xxx (2013) xxx–xxx Contents lists available at SciVerse ScienceDirect South African Journal of Botany journal homepage: www.elsevier.com/locate/sajb Reconstructing the deep-branching relationships of the papilionoid legumes D. Cardoso a,⁎, R.T. Pennington b, L.P. de Queiroz a, J.S. Boatwright c, B.-E. Van Wyk d, M.F. Wojciechowski e, M. Lavin f a Herbário da Universidade Estadual de Feira de Santana (HUEFS), Av. Transnordestina, s/n, Novo Horizonte, 44036-900 Feira de Santana, Bahia, Brazil b Royal Botanic Garden Edinburgh, 20A Inverleith Row, EH5 3LR Edinburgh, UK c Department of Biodiversity and Conservation Biology, University of the Western Cape, Modderdam Road, \ Bellville, South Africa d Department of Botany and Plant Biotechnology, University of Johannesburg, P. O. Box 524, 2006 Auckland Park, Johannesburg, South Africa e School of Life Sciences, Arizona State University, Tempe, AZ 85287-4501, USA f Department of Plant Sciences and Plant Pathology, Montana State University, Bozeman, MT 59717, USA article info abstract Available online xxxx Resolving the phylogenetic relationships of the deep nodes of papilionoid legumes (Papilionoideae) is essential to understanding the evolutionary history and diversification of this economically and ecologically important legume Edited by J Van Staden subfamily. The early-branching papilionoids include mostly Neotropical trees traditionally circumscribed in the tribes Sophoreae and Swartzieae. They are more highly diverse in floral morphology than other groups of Keywords: Papilionoideae. For many years, phylogenetic analyses of the Papilionoideae could not clearly resolve the relation- Leguminosae ships of the early-branching lineages due to limited sampling. -
Rooibos (Aspalathus Linearis) and Honeybush (Cyclopia Spp.): from Bush Teas to Potential Therapy for Cardiovascular Disease Shantal Windvogel
Chapter Rooibos (Aspalathus linearis) and Honeybush (Cyclopia spp.): From Bush Teas to Potential Therapy for Cardiovascular Disease Shantal Windvogel Abstract Cardiovascular disease (CVD) is a leading cause of worldwide deaths. A num- ber of risk factors for cardiovascular disease as well as type 2 diabetes and stroke present as the metabolic syndrome. Metabolic risk factors include hypertension, abdominal obesity, dyslipidaemia and increased blood glucose levels and may also include risk factors such as vascular dysfunction, insulin resistance, low high den- sity lipoprotein (HDL) cholesterol levels and inflammation. Rooibos (Aspalathus linearis) and honeybush (Cyclopia spp.) are indigenous South African plants whose reported health benefits include anti-tumour, anti-inflammatory, anti-obesity, anti- oxidant, cardioprotective and anti-diabetic properties. The last two decades have seen worldwide interest and success for these plants, not only as health beverages but also as preservatives, flavourants and skincare products. This review will focus on the current literature supporting the function of these plants as nutraceuticals capable of potentially reducing the risk of cardiovascular disease. Keywords: honeybush, rooibos, cardiovascular disease, diabetes, polyphenols 1. Introduction Cardiovascular disease is the leading cause of deaths worldwide, killing 17.9 million people in 2016 [1]. While the number of cardiovascular disease related morbidity and mortality in the developed world has decreased or remained steady, the developing world has seen an increase. Limited resources, poverty, poor access to affordable healthcare, poor implementation of health policies, as well as poor education may be some of the reasons for the increase in cardiovascular diseases in low to middle income countries [2]. A number of risk factors for cardiovascu- lar disease as well as type 2 diabetes and stroke present as metabolic syndrome.