The Genetics and Biochemistry of Floral Pigments
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Opuntia Dillenii (Ker-Gawl) Haw
Available online on www.ijppr.com International Journal of Pharmacognosy and Phytochemical Research 2015; 7(6); 1101-1110 ISSN: 0975-4873 Research Article Pectin and Isolated Betalains from Opuntia dillenii (Ker-Gawl) Haw. Fruit Exerts Antiproliferative Activity by DNA Damage Induced Apoptosis Pavithra K1, Sumanth, M S2, Manonmani,H K2, ShashirekhaM N1* 1Fruit and Vegetable Technology, CSIR-Central Food Technological Research Institute Mysore -570 020, Karnataka, India 2Food Protectants and Infestation Control, CSIR-Central Food Technological Research Institute, Mysore -570 020, Karnataka, India Available Online: 11th October, 2015 ABSTRACT In India, nearly three million patients are suffering from Cancer. There is an alarming increase in new cancer cases and every year ~ 4.5 million people die from cancer in the world. In recent years there is a trend to adopt botanical therapy that uses many different plant constituents as medicine. One plant may be able to address many problems simultaneously by stimulating the immune system to help fight off cancer cells. There appears to be exceptional and growing public enthusiasm for botanical or "herbal" medicines, especially amongst cancer patients. In present study, we studied the in vitro anticancer properties of various fractions of cactus Opuntia dillenii (Ker-Gawl) Haw.employing Erlich ascites carcinoma (EAC) cell lines. The EAC cells when treated with fractions of O. dillenii showed apoptosis that was further confirmed by fluorescent and confocal microscopy. In addition, Cellular DNA content was determined by Flow cytometric analysis, wherein pigment treated cells exhibited 78.88 % apoptosis while pulp and pectin treated cells showed 39 and 38% apoptosis respectively. Tunnel assay was carried out to detect extensive DNA degradation in late stages of apoptosis. -
Flavonoid-Modifying Capabilities of the Human Gut Microbiome—An in Silico Study
nutrients Article Flavonoid-Modifying Capabilities of the Human Gut Microbiome—An In Silico Study Tobias Goris 1,* , Rafael R. C. Cuadrat 2 and Annett Braune 1 1 Research Group Intestinal Microbiology, Department of Molecular Toxicology, German Institute of Human Nutrition Potsdam-Rehbruecke, Arthur-Scheunert-Allee 114-116, 14558 Nuthetal, Germany; [email protected] 2 Department of Molecular Epidemiology, German Institute of Human Nutrition Potsdam-Rehbruecke, Arthur-Scheunert-Allee 114-116, 14558 Nuthetal, Germany; [email protected] * Correspondence: [email protected] Abstract: Flavonoids are a major group of dietary plant polyphenols and have a positive health impact, but their modification and degradation in the human gut is still widely unknown. Due to the rise of metagenome data of the human gut microbiome and the assembly of hundreds of thousands of bacterial metagenome-assembled genomes (MAGs), large-scale screening for potential flavonoid-modifying enzymes of human gut bacteria is now feasible. With sequences of characterized flavonoid-transforming enzymes as queries, the Unified Human Gastrointestinal Protein catalog was analyzed and genes encoding putative flavonoid-modifying enzymes were quantified. The results revealed that flavonoid-modifying enzymes are often encoded in gut bacteria hitherto not considered to modify flavonoids. The enzymes for the physiologically important daidzein-to-equol conversion, well studied in Slackia isoflavoniconvertens, were encoded only to a minor extent in Slackia MAGs, but were more abundant in Adlercreutzia equolifaciens and an uncharacterized Eggerthellaceae species. In addition, enzymes with a sequence identity of about 35% were encoded in highly abundant MAGs of uncultivated Collinsella species, which suggests a hitherto uncharacterized daidzein-to-equol potential in these bacteria. -
L.) Leaves Tao Jiang1,3, Kunyuan Guo2,3, Lingdi Liu1, Wei Tian1, Xiaoliang Xie1, Saiqun Wen1 & Chunxiu Wen1*
www.nature.com/scientificreports OPEN Integrated transcriptomic and metabolomic data reveal the favonoid biosynthesis metabolic pathway in Perilla frutescens (L.) leaves Tao Jiang1,3, Kunyuan Guo2,3, Lingdi Liu1, Wei Tian1, Xiaoliang Xie1, Saiqun Wen1 & Chunxiu Wen1* Perilla frutescens (L.) is an important medicinal and edible plant in China with nutritional and medical uses. The extract from leaves of Perilla frutescens contains favonoids and volatile oils, which are mainly used in traditional Chinese medicine. In this study, we analyzed the transcriptomic and metabolomic data of the leaves of two Perilla frutescens varieties: JIZI 1 and JIZI 2. A total of 9277 diferentially expressed genes and 223 favonoid metabolites were identifed in these varieties. Chrysoeriol, apigenin, malvidin, cyanidin, kaempferol, and their derivatives were abundant in the leaves of Perilla frutescens, which were more than 70% of total favonoid contents. A total of 77 unigenes encoding 15 enzymes were identifed as candidate genes involved in favonoid biosynthesis in the leaves of Perilla frutescens. High expression of the CHS gene enhances the accumulation of favonoids in the leaves of Perilla frutescens. Our results provide valuable information on the favonoid metabolites and candidate genes involved in the favonoid biosynthesis pathways in the leaves of Perilla frutescens. Perilla frutescens (L.), which is a self-compatible annual herb, belongs to the family Lamiaceae. Tis species has been widely cultivated in China, Japan, and Korea for centuries. Perilla frutescens is an important medicinal and edible plant in China with medical and nutritional uses 1. Its leaves can be utilized as a transitional medicinal herb, as a vegetable, and as a spice, and its seeds can be processed into foods and nutritional edible oils 2. -
RNA-Sequencing Analysis Reveals Betalains Metabolism in the Leaf of Amaranthus Tricolor L
RESEARCH ARTICLE RNA-sequencing analysis reveals betalains metabolism in the leaf of Amaranthus tricolor L. Shengcai Liu1☯, Xueli Zheng1☯, Junfei Pan1, Liyun Peng1, Chunzhen Cheng1, Xiao Wang1, 1 1 1 1,2 1 Chunli Zhao , Zihao Zhang , Yuling Lin , Xu XuHan *, Zhongxiong LaiID * 1 Institute of Horticultural Biotechnology, Fujian Agriculture and Forestry University, Fuzhou, China, 2 Institut de la Recherche Interdisciplinaire de Toulouse, Toulouse, France ☯ These authors contributed equally to this work. * [email protected](ZL); [email protected] (XXH) a1111111111 a1111111111 a1111111111 a1111111111 Abstract a1111111111 Amaranth plants contain large amounts of betalains, including betaxanthins and betacya- nins. Amaranthin is a betacyanin, and its molecular structure and associated metabolic pathway differ from those of betanin in beet plants. The chlorophyll, carotenoid, betalain, and flavonoid contents in amaranth leaves were analyzed. The abundance of betalain, beta- OPEN ACCESS cyanin, and betaxanthin was 2±5-fold higher in the red leaf sectors than in the green leaf Citation: Liu S, Zheng X, Pan J, Peng L, Cheng C, sectors. Moreover, a transcriptome database was constructed for the red and green sectors Wang X, et al. (2019) RNA-sequencing analysis of amaranth leaves harvested from 30-day-old seedlings. 22 unigenes were selected to ana- reveals betalains metabolism in the leaf of Amaranthus tricolor L.. PLoS ONE 14(4): lyze the expression profiles in the two leaf sectors. The RNA-sequencing data indicated that e0216001. https://doi.org/10.1371/journal. many unigenes are involved in betalain metabolic pathways. The potential relationships pone.0216001 between diverse metabolic pathways and betalain metabolism were analyzed. -
Combinatorial Biosynthesis of Non-Bacterial and Unnatural Flavonoids, Stilbenoids and Curcuminoids by Microorganisms Sueharu Horinouchi
J. Antibiot. 61(12): 709–728, 2008 THE JOURNAL OF REVIEW ARTICLE ANTIBIOTICS Combinatorial Biosynthesis of Non-bacterial and Unnatural Flavonoids, Stilbenoids and Curcuminoids by Microorganisms Sueharu Horinouchi Received: August 1, 2008 / Accepted: October 14, 2008 © Japan Antibiotics Research Association Abstract One of the approaches of combinatorial biosynthesis is combining genes from different organisms and designing a new set of gene clusters to produce bioactive compounds, leading to diversification of both chemical and natural product libraries. This makes efficient use of the potential of the host organisms, especially when microorganisms are used. An Escherichia coli system, in which artificial biosynthetic pathways for production of plant-specific medicinal polyketides, such as flavonoids, stilbenoids, isoflavonoids, and curcuminoids, are assembled, has been designed and expressed. Starting with amino acids tyrosine and phenylalanine as substrates, this system yields naringenin, resveratrol, genistein, and curcumin, for example, all of which are beneficial to human health because of their wide variety of biological activities. Supplementation of unnatural carboxylic acids to the recombinant E. coli cells carrying the artificial pathways by precursor-directed biosynthesis results in production of unnatural compounds. Addition of decorating or modification enzymes to the artificial pathway leads to production of natural and unnatural flavonols, flavones, and methylated resveratrols. This microbial system is promising for construction of larger libraries by employing other polyketide synthases and decorating enzymes of various origins. In addition, the concept of building and expressing artificial biosynthetic pathways for production of non-bacterial and unnatural compounds in microorganisms should be successfully applied to production of not only plant-specific polyketides but also many other useful compound classes. -
Plant Phenolics: Bioavailability As a Key Determinant of Their Potential Health-Promoting Applications
antioxidants Review Plant Phenolics: Bioavailability as a Key Determinant of Their Potential Health-Promoting Applications Patricia Cosme , Ana B. Rodríguez, Javier Espino * and María Garrido * Neuroimmunophysiology and Chrononutrition Research Group, Department of Physiology, Faculty of Science, University of Extremadura, 06006 Badajoz, Spain; [email protected] (P.C.); [email protected] (A.B.R.) * Correspondence: [email protected] (J.E.); [email protected] (M.G.); Tel.: +34-92-428-9796 (J.E. & M.G.) Received: 22 October 2020; Accepted: 7 December 2020; Published: 12 December 2020 Abstract: Phenolic compounds are secondary metabolites widely spread throughout the plant kingdom that can be categorized as flavonoids and non-flavonoids. Interest in phenolic compounds has dramatically increased during the last decade due to their biological effects and promising therapeutic applications. In this review, we discuss the importance of phenolic compounds’ bioavailability to accomplish their physiological functions, and highlight main factors affecting such parameter throughout metabolism of phenolics, from absorption to excretion. Besides, we give an updated overview of the health benefits of phenolic compounds, which are mainly linked to both their direct (e.g., free-radical scavenging ability) and indirect (e.g., by stimulating activity of antioxidant enzymes) antioxidant properties. Such antioxidant actions reportedly help them to prevent chronic and oxidative stress-related disorders such as cancer, cardiovascular and neurodegenerative diseases, among others. Last, we comment on development of cutting-edge delivery systems intended to improve bioavailability and enhance stability of phenolic compounds in the human body. Keywords: antioxidant activity; bioavailability; flavonoids; health benefits; phenolic compounds 1. Introduction Phenolic compounds are secondary metabolites widely spread throughout the plant kingdom with around 8000 different phenolic structures [1]. -
Effects of Spermine and Putrescine Polyamines on Capsaicin Accumula- Tion in Capsicum Annuum L
doi:10.14720/aas.2020.115.2.1199 Original research article / izvirni znanstveni članek Effects of spermine and putrescine polyamines on capsaicin accumula- tion in Capsicum annuum L. cell suspension cultures Esra KOÇ 1, 2, Cemil İŞLEK 3, Belgizar KARAYİĞİT 1 Received June 25, 2019; accepted April 11, 2020. Delo je prispelo 25. junija 2019, sprejeto 11. aprila 2020 Effects of spermine and putrescine polyamines on capsaicin Učinki poliaminov spermina in putrescina na akumulacijo accumulation in Capsicum annuum L. cell suspension cul- kapsaicina v suspenzijski kulturi celic paprike Capsicum an- tures nuum L. Abstract: This study examined the effects of different con- Izvleček: V raziskavi so bili preučevani učinki različnih centrations of spermine (Spm) and putrescine (Put) elicitors on koncentracij spermina (Spm) in putrescina (Put) kot elicitorjev capsaicin production at different times in cell suspension cul- na tvorbo kapsaicina v različnih časovnih intervalih v suspen- ture of peper (Capsicum annuum L‘Kahramanmaraş Hat-187’.), zijski celični kulturi paprike (Capsicum annuum ‘Kahramanma- raised from pepper seeds. Callus was obtained from hypocotyl raş Hat-187’. Kalus je bil pridobljen iz izsečkov hipokotila kalic explants of pepper seedlings germinated in vitro conditions, paprike, ki je vzkalila v in vitro razmerah, celične suspenzije so and cell suspensions were prepared from calluses. Spm (0.1, 0.2 bile pripravljene iz kalusov. Spm (0,1; 0,2 in 0,4 mg l-1) in Put -1) and Put (0.1, 0.2 and 0.4 mg l-1) elicitors were ap- and 0.4 mg l (0,1; 0,2 in 0,4 mg l-1) sta bila dodajana kor elicitorja v celične plied on cell suspensions, and control groups free from elicitor suspenzije, hkrati so bile vzpostavljene kontrolne celične kul- treatment were created. -
COST EFFECTIVE PRODUCTION of SPECIALTY CUT FLOWERS By
COST EFFECTIVE PRODUCTION OF SPECIALTY CUT FLOWERS By TODD JASON CAVINS Bachelor of Science Southwestern Oklahoma State University Weatherford, Oklahoma 1997 Submitted to the Faculty of the Graduate College of the Oklahoma State University in partial fulfillment of the requirements for the Degree of MASTER OF SCIENCE December, 1999 COST EFFECTIVE PRODUCTION OF SPECIALTY CUT FLOWERS Thesis Approved: ' 1 Thesis Advisor .. ;.; ,, ( Dean of the Graduate College 11 ACKNOWLEDGEMENTS The purpose of this study was to improve production methods of various specialty cut flower species. Improving production methods allows growers to reduce cost, improve plant quality and earn higher profits. This study involved three research areas of specialty cut flowers. Partial funding was provided by a S.A.R.E. grant and Bear Creek Farm, Stillwater, OK. I would like to thank my principle advisor Dr. John Dole for his encouragement, support, honesty and perseverance. I would like to thank Dr. Janet Cole and Dr. Jim Ownby for serving on my thesis committee. Dr. Cole offered valuable insight and direction towards the research. Dr. Ownby contributed with his wealth of knowledge in plant physiology. A special thanks goes to Vicki Stamback and the gang at Bear Creek Farm. Vicki's experience as a specialty cut flower grower allowed me to gain personal knowledge of the cut flower industry that would not have taken place without her. Vicki's efforts and cooperation greatly improved this study. I want to thank Randall Smith and Leah Aufill for their assistance and plant care. Tim Hooper also contributed by offering his experiences from the floriculture industry and providing stress relieving lunch breaks. -
Pitaia (Hylocereus Sp.): Uma Revisão Para O Brasil
Gaia Scientia (2014) Volume 8 (1): 90-98 Versão On line ISSN 1981-1268 http://periodicos.ufpb.br/ojs2/index.php/gaia/index Pitaia (Hylocereus sp.): Uma revisão para o Brasil Ernane Nogueira Nunes1*, Alex Sandro Bezerra de Sousa2, Camilla Marques de Lucena3, Silvanda de Melo Silva4, Reinaldo Farias Paiva de Lucena5, Carlos Antônio Belarmino Alves6 e Ricardo Elesbão Alves7. 1Aluno de Pós Graduação (Mestrado) do Programa de Pós Graduação em Agronomia. Universidade Federal da Paraíba. Campus II. Centro de Ciências Agrárias. Areia, Paraíba, Brasil. CEP: 58.397-000. 2Aluno de Graduação em Agronomia. Universidade Federal da Paraíba. Campus II. Centro de Ciências Agrárias. Areia, Paraíba, Brasil. CEP: 58.397-000. e-mail: [email protected] 3Aluna de Pós Graduação (Doutorado) do Programa de Pós Graduação em Desenvolvimento e Meio Ambiente. Universidade Federal da Paraíba. Campus I. João Pessoa, Paraíba, Brasil. CEP: 5801-970. e-mail: [email protected] 4Professora da Universidade Federal da Paraíba. Campus II. Centro de Ciências Agrárias. Departamento de Ciências Fundamentais e Sociais. Areia. Paraíba. Brasil. CEP: 58.397-000. e-mail: [email protected] 5Professor da Universidade Federal da Paraíba. Campus II. Centro de Ciências Agrárias. Departamento de Fitotecnia e Ciências Ambientais. Setor de Ecologia e Biodiversidade. Laboratório de Etnoecologia. Areia. Paraíba. Brasil. CEP: 58.397-000. e-mail: [email protected] 6Professor da Universidade Estadual da Paraíba. Centro de Humanidades. Guarabira, Paraíba, Brasil. CEP: 58.200-000. e-mail: [email protected] 7Pesquisadores da Empresa Brasileira de Pesquisa Agropecuária. EMBRAPA Agroindústria Tropical. Fortaleza. Ceará, Brasil. CEP: 60511-110. e-mail: [email protected]; [email protected] Artigo recebido em 17 janeiro 2013; aceito para publicação em 8 março 2014; publicado 12 março 2014 Resumo As espécies da família Cactaceae, possivelmente tiveram sua origem na América do Norte, Central e do Sul. -
Fractionation of Orange Peel Phenols in Ultrafiltered Molasses and Mass Balance Studies of Their Antioxidant Levels
7586 J. Agric. Food Chem. 2004, 52, 7586−7592 Fractionation of Orange Peel Phenols in Ultrafiltered Molasses and Mass Balance Studies of Their Antioxidant Levels JOHN A. MANTHEY† Citrus and Subtropical Products Laboratory, Southern Atlantic Area, Agricultural Research Service, U.S. Department of Agriculture, 600 Avenue S N.W., Winter Haven, Florida 33881 Orange peel molasses, a byproduct of juice production, contains high concentrations of phenols, including numerous flavanone and flavone glycosides, polymethoxylated flavones, hydroxycinnamates, and other miscellaneous phenolic glycosides and amines. Extensive fractionation of these phenols was achieved by adsorption, ion exchange, and size exclusion chromatography. Size exclusion chromatography effectively separated the different classes of flavonoids in ultrafiltered molasses, including the polymethoxylated flavones, flavanone-O-trisaccharides, flavanone- and flavone-O- disaccharides, and, finally, flavone-C-glycosides. Mass spectral analysis of the early-eluting flavonoid fractions off the size exclusion column revealed a broad collection of minor-occurring flavone glycosides, which included, in part, glycosides of limocitrin, limocitrol, and chrysoeriol. Most hydroxycinnamates in the molasses were recovered by ion exchange chromatography, which also facilitated the recovery of fractions containing many other miscellaneous phenols. Total antioxidant levels and total phenolic contents were measured for the separate categories of phenols in the molasses. Inhibition of the superoxide anion reduction of nitroblue tetrazolium showed that a significant amount of the total antioxidant activity in orange peel molasses was attributable to minor-occurring flavones. The miscellaneous phenolic-containing fractions, in which a large portion of the total phenolic content in molasses occurred, also constituted a major portion of the total antioxidants in ultrafiltered molasses. -
Global Transcriptome Analysis and Identification of Genes Involved In
www.nature.com/scientificreports OPEN Global transcriptome analysis and identification of genes involved in nutrients accumulation during Received: 19 December 2016 Accepted: 31 August 2017 seed development of rice tartary Published: xx xx xxxx buckwheat (Fagopyrum Tararicum) Juan Huang1, Jiao Deng1, Taoxiong Shi1, Qijiao Chen1, Chenggang Liang1, Ziye Meng1, Liwei Zhu1, Yan Wang1, Fengli Zhao2, Shizhou Yu3 & Qingfu Chen1 Tartary buckwheat seeds are rich in various nutrients, such as storage proteins, starch, and flavonoids. To get a good knowledge of the transcriptome dynamics and gene regulatory mechanism during the process of seed development and nutrients accumulation, we performed a comprehensive global transcriptome analysis using rice tartary buckwheat seeds at different development stages, namely pre-filling stage, filling stage, and mature stage. 24 819 expressed genes, including 108 specifically expressed genes, and 11 676 differentially expressed genes (DEGs) were identified. qRT-PCR analysis was performed on 34 DEGs to validate the transcriptome data, and a good consistence was obtained. Based on their expression patterns, the identified DEGs were classified to eight clusters, and the enriched GO items in each cluster were analyzed. In addition, 633 DEGs related to plant hormones were identified. Furthermore, genes in the biosynthesis pathway of nutrients accumulation were analyzed, including 10, 20, and 23 DEGs corresponding to the biosynthesis of seed storage proteins, flavonoids, and starch, respectively. This is the first transcriptome analysis during seed development of tartary buckwheat. It would provide us a comprehensive understanding of the complex transcriptome dynamics during seed development and gene regulatory mechanism of nutrients accumulation. Seed is the primary storage organ in plants for storing nutrients such as starch, lipids, and proteins1. -
Comparison of Metabolome and Transcriptome of Flavonoid
International Journal of Molecular Sciences Article Comparison of Metabolome and Transcriptome of Flavonoid Biosynthesis Pathway in a Purple-Leaf Tea Germplasm Jinmingzao and a Green-Leaf Tea Germplasm Huangdan reveals Their Relationship with Genetic Mechanisms of Color Formation Xuejin Chen, Pengjie Wang, Yucheng Zheng, Mengya Gu, Xinying Lin, Shuyan Wang, Shan Jin * and Naixing Ye * College of Horticulture, Fujian Agriculture and Forestry University/Key Laboratory of Tea Science in University of Fujian Province, Fuzhou 350002, China; [email protected] (X.C.); [email protected] (P.W.); [email protected] (Y.Z.); [email protected] (M.G.); [email protected] (X.L.); [email protected] (S.W.) * Correspondence: [email protected] (S.J.); [email protected] (N.Y.) Received: 4 May 2020; Accepted: 7 June 2020; Published: 11 June 2020 Abstract: Purple-leaf tea is a phenotype with unique color because of its high anthocyanin content. The special flavor of purple-leaf tea is highly different from that of green-leaf tea, and its main ingredient is also of economic value. To probe the genetic mechanism of the phenotypic characteristics of tea leaf color, we conducted widely targeted metabolic and transcriptomic profiling. The metabolites in the flavonoid biosynthetic pathway of purple- and green-leaf tea were compared, and results showed that phenolic compounds, including phenolic acids, flavonoids, and tannins, accumulated in purple-leaf tea. The high expression of genes related to flavonoid biosynthesis (e.g., PAL and LAR) exhibits the specific expression of biosynthesis and the accumulation of these metabolites. Our result also shows that two CsUFGTs were positively related to the accumulation of anthocyanin.