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Taxonomy and Biochemical Genetics of Some African Freshwater Fish Species
_________________________________________________________________________Swansea University E-Theses Taxonomy and biochemical genetics of some African freshwater fish species. Abban, Edward Kofi How to cite: _________________________________________________________________________ Abban, Edward Kofi (1988) Taxonomy and biochemical genetics of some African freshwater fish species.. thesis, Swansea University. http://cronfa.swan.ac.uk/Record/cronfa43062 Use policy: _________________________________________________________________________ This item is brought to you by Swansea University. Any person downloading material is agreeing to abide by the terms of the repository licence: copies of full text items may be used or reproduced in any format or medium, without prior permission for personal research or study, educational or non-commercial purposes only. The copyright for any work remains with the original author unless otherwise specified. The full-text must not be sold in any format or medium without the formal permission of the copyright holder. Permission for multiple reproductions should be obtained from the original author. Authors are personally responsible for adhering to copyright and publisher restrictions when uploading content to the repository. Please link to the metadata record in the Swansea University repository, Cronfa (link given in the citation reference above.) http://www.swansea.ac.uk/library/researchsupport/ris-support/ TAXONOMY AND BIOCHEMICAL GENETICS OF SOME AFRICAN FRESHWATER FISH SPECIES. BY EDWARD KOFI ABBAN A Thesis submitted for the degree of Ph.D. UNIVERSITY OF WALES. 1988 ProQuest Number: 10821454 All rights reserved INFORMATION TO ALL USERS The quality of this reproduction is dependent upon the quality of the copy submitted. In the unlikely event that the author did not send a com plete manuscript and there are missing pages, these will be noted. -
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CICHLIFORMES: Cichlidae (part 3) · 1 The ETYFish Project © Christopher Scharpf and Kenneth J. Lazara COMMENTS: v. 6.0 - 30 April 2021 Order CICHLIFORMES (part 3 of 8) Family CICHLIDAE Cichlids (part 3 of 7) Subfamily Pseudocrenilabrinae African Cichlids (Haplochromis through Konia) Haplochromis Hilgendorf 1888 haplo-, simple, proposed as a subgenus of Chromis with unnotched teeth (i.e., flattened and obliquely truncated teeth of H. obliquidens); Chromis, a name dating to Aristotle, possibly derived from chroemo (to neigh), referring to a drum (Sciaenidae) and its ability to make noise, later expanded to embrace cichlids, damselfishes, dottybacks and wrasses (all perch-like fishes once thought to be related), then beginning to be used in the names of African cichlid genera following Chromis (now Oreochromis) mossambicus Peters 1852 Haplochromis acidens Greenwood 1967 acies, sharp edge or point; dens, teeth, referring to its sharp, needle-like teeth Haplochromis adolphifrederici (Boulenger 1914) in honor explorer Adolf Friederich (1873-1969), Duke of Mecklenburg, leader of the Deutsche Zentral-Afrika Expedition (1907-1908), during which type was collected Haplochromis aelocephalus Greenwood 1959 aiolos, shifting, changing, variable; cephalus, head, referring to wide range of variation in head shape Haplochromis aeneocolor Greenwood 1973 aeneus, brazen, referring to “brassy appearance” or coloration of adult males, a possible double entendre (per Erwin Schraml) referring to both “dull bronze” color exhibited by some specimens and to what -
Indian and Madagascan Cichlids
FAMILY Cichlidae Bonaparte, 1835 - cichlids SUBFAMILY Etroplinae Kullander, 1998 - Indian and Madagascan cichlids [=Etroplinae H] GENUS Etroplus Cuvier, in Cuvier & Valenciennes, 1830 - cichlids [=Chaetolabrus, Microgaster] Species Etroplus canarensis Day, 1877 - Canara pearlspot Species Etroplus suratensis (Bloch, 1790) - green chromide [=caris, meleagris] GENUS Paretroplus Bleeker, 1868 - cichlids [=Lamena] Species Paretroplus dambabe Sparks, 2002 - dambabe cichlid Species Paretroplus damii Bleeker, 1868 - damba Species Paretroplus gymnopreopercularis Sparks, 2008 - Sparks' cichlid Species Paretroplus kieneri Arnoult, 1960 - kotsovato Species Paretroplus lamenabe Sparks, 2008 - big red cichlid Species Paretroplus loisellei Sparks & Schelly, 2011 - Loiselle's cichlid Species Paretroplus maculatus Kiener & Mauge, 1966 - damba mipentina Species Paretroplus maromandia Sparks & Reinthal, 1999 - maromandia cichlid Species Paretroplus menarambo Allgayer, 1996 - pinstripe damba Species Paretroplus nourissati (Allgayer, 1998) - lamena Species Paretroplus petiti Pellegrin, 1929 - kotso Species Paretroplus polyactis Bleeker, 1878 - Bleeker's paretroplus Species Paretroplus tsimoly Stiassny et al., 2001 - tsimoly cichlid GENUS Pseudetroplus Bleeker, in G, 1862 - cichlids Species Pseudetroplus maculatus (Bloch, 1795) - orange chromide [=coruchi] SUBFAMILY Ptychochrominae Sparks, 2004 - Malagasy cichlids [=Ptychochrominae S2002] GENUS Katria Stiassny & Sparks, 2006 - cichlids Species Katria katria (Reinthal & Stiassny, 1997) - Katria cichlid GENUS -
Outgroup Effects on Root Position and Tree Topology in the AFLP Phylogeny of a Rapidly Radiating Lineage of Cichlid Fish
Accepted Manuscript Short Communication Outgroup effects on root position and tree topology in the AFLP phylogeny of a rapidly radiating lineage of cichlid fish Paul C. Kirchberger, Kristina M. Sefc, Christian Sturmbauer, Stephan Koblmüller PII: S1055-7903(13)00347-3 DOI: http://dx.doi.org/10.1016/j.ympev.2013.09.005 Reference: YMPEV 4706 To appear in: Molecular Phylogenetics and Evolution Received Date: 5 December 2012 Revised Date: 4 September 2013 Accepted Date: 6 September 2013 Please cite this article as: Kirchberger, P.C., Sefc, K.M., Sturmbauer, C., Koblmüller, S., Outgroup effects on root position and tree topology in the AFLP phylogeny of a rapidly radiating lineage of cichlid fish, Molecular Phylogenetics and Evolution (2013), doi: http://dx.doi.org/10.1016/j.ympev.2013.09.005 This is a PDF file of an unedited manuscript that has been accepted for publication. As a service to our customers we are providing this early version of the manuscript. The manuscript will undergo copyediting, typesetting, and review of the resulting proof before it is published in its final form. Please note that during the production process errors may be discovered which could affect the content, and all legal disclaimers that apply to the journal pertain. 1 Outgroup effects on root position and tree topology in the AFLP phylogeny of a rapidly 2 radiating lineage of cichlid fish 3 4 Paul C. Kirchbergera,b, Kristina M. Sefca, Christian Sturmbauera, Stephan Koblmüllera.* 5 6 a Department of Zoology, Karl‐Franzens‐University Graz, Universitätsplatz 2, A‐8010 Graz, 7 Austria 8 b present address: Department of Biological Sciences, University of Alberta, Edmonton, AB, 9 Canada T6G 2E9 10 11 * Corresponding author: Tel.:+43 316 380 3978; Fax: +43 316 380 9875; email: 12 stephan.koblmueller@uni‐graz.at (S. -
Presentation
Evolution in Darwin’s Dreampond: The genomic substrate for adaptive radiation in Lake Tanganyika cichlid fish Walter Salzburger Zoological Institute drawings: Julie Johnson drawings: !Charles R. Darwin’s (1809-1882) journey onboard of the HMS Beagle lasted from 27 December 1831 until 2 October 1836 Adaptive Radiation !Darwin’s specimens were classified as “an entirely new group” of 12 species by ornithologist John Gould (1804-1881) African Great Lakes taxonomic diversity at the species level L. Turkana 1 5 50 500 species 0 50 100 % endemics 4°N L. Tanganyika L. Tanganyika L. Albert 2°N L. Malawi L. Malawi L. Edward L. Victoria L. Victoria 0° L. Edward L. Edward L. Kivu L. Victoria 2°S L. Turkana L. Turkana L. Albert L. Albert 4°S L. Kivu L. Kivu L. Tanganyika 6°S taxonomic diversity at the genus level 10 20 30 40 50 genera 0 50 100 % endemics 8°S Rungwe L. Tanganyika L. Tanganyika Volcanic Field L. Malawi 10°S L. Malawi L. Victoria L. Victoria 12°S L. Malawi L. Edward L. Edward L. Turkana L. Turkana 14°S cichlid fish non-cichlid fish L. Albert L. Albert gastropods bivalves 28°E 30°E 32°E 34°E 36°E L. Kivu L. Kivu ostracods ••• W Salzburger, B Van Bockxlaer, AS Cohen (2017), AREES | AS Cohen & W Salzburger (2017) Scientific Drilling Cichlid Fishes Fotos: Angel M. Fitor Angel M. Fotos: !About every 20th fish species on our planet is the product of the ongoing explosive radiations of cichlids in the East African Great Lakes taxonomic~Diversity Victoria [~500 sp.] Tanganyika [250 sp.] Malawi [~1000 sp.] ••• ME Santos & W Salzburger (2012) Science ecological morphological~Diversity zooplanktivore insectivore piscivore algae scraper leaf eater fin biter eye biter mud digger scale eater ••• H Hofer & W Salzburger (2008) Biologie III ecological morphological~Diversity ••• W Salzburger (2009) Molecular Ecology astbur Astbur.:1-90001 Alignment 1 neobri 100% Neobri. -
Towards a Regional Information Base for Lake Tanganyika Research
RESEARCH FOR THE MANAGEMENT OF THE FISHERIES ON LAKE GCP/RAF/271/FIN-TD/Ol(En) TANGANYIKA GCP/RAF/271/FIN-TD/01 (En) January 1992 TOWARDS A REGIONAL INFORMATION BASE FOR LAKE TANGANYIKA RESEARCH by J. Eric Reynolds FINNISH INTERNATIONAL DEVELOPMENT AGENCY FOOD AND AGRICULTURE ORGANIZATION OF THE UNITED NATIONS Bujumbura, January 1992 The conclusions and recommendations given in this and other reports in the Research for the Management of the Fisheries on Lake Tanganyika Project series are those considered appropriate at the time of preparation. They may be modified in the light of further knowledge gained at subsequent stages of the Project. The designations employed and the presentation of material in this publication do not imply the expression of any opinion on the part of FAO or FINNIDA concerning the legal status of any country, territory, city or area, or concerning the determination of its frontiers or boundaries. PREFACE The Research for the Management of the Fisheries on Lake Tanganyika project (Tanganyika Research) became fully operational in January 1992. It is executed by the Food and Agriculture organization of the United Nations (FAO) and funded by the Finnish International Development Agency (FINNIDA). This project aims at the determination of the biological basis for fish production on Lake Tanganyika, in order to permit the formulation of a coherent lake-wide fisheries management policy for the four riparian States (Burundi, Tanzania, Zaïre and Zambia). Particular attention will be also given to the reinforcement of the skills and physical facilities of the fisheries research units in all four beneficiary countries as well as to the buildup of effective coordination mechanisms to ensure full collaboration between the Governments concerned. -
Morphology, Molecules, and Monogenean Parasites: an Example of an Integrative Approach to Cichlid Biodiversity
RESEARCH ARTICLE Morphology, Molecules, and Monogenean Parasites: An Example of an Integrative Approach to Cichlid Biodiversity Maarten Van Steenberge1,2,3*, Antoine Pariselle4¤a, Tine Huyse1,2, Filip A. M. Volckaert2, Jos Snoeks1,2, Maarten P. M. Vanhove1,2,5¤b 1 Biology Department, Royal Museum for Central Africa, Tervuren, Belgium, 2 Laboratory of Biodiversity and Evolutionary Genomics, Department of Biology, University of Leuven, Leuven, Belgium, 3 Institute of Zoology, University of Graz, Graz, Austria, 4 Institut des Sciences de l'Évolution, IRD-CNRS-Université Montpellier, Montpellier, France, 5 Institute of Marine Biological Resources and Inland Waters, Hellenic Centre for Marine Research, Anavyssos, Greece ¤a Current address: IRD, ISE-M, Yaoundé, Cameroon ¤b Current address: Capacities for Biodiversity and Sustainable Development, Operational Directorate Natural Environment, Royal Belgian Institute of Natural Sciences, Brussels, Belgium * [email protected] OPEN ACCESS Citation: Van Steenberge M, Pariselle A, Huyse T, Abstract Volckaert FAM, Snoeks J, Vanhove MPM (2015) Morphology, Molecules, and Monogenean Parasites: The unparalleled biodiversity of Lake Tanganyika (Africa) has fascinated biologists for over An Example of an Integrative Approach to Cichlid a century; its unique cichlid communities are a preferred model for evolutionary research. Biodiversity. PLoS ONE 10(4): e0124474. doi:10.1371/journal.pone.0124474 Although species delineation is, in most cases, relatively straightforward, higher-order clas- sifications were shown not to agree with monophyletic groups. Here, traditional morphologi- Academic Editor: Robert Guralnick, University of Colorado, UNITED STATES cal methods meet their limitations. A typical example are the tropheine cichlids currently belonging to Simochromis and Pseudosimochromis. The affiliations of these widespread Received: August 19, 2014 and abundant cichlids are poorly understood. -
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CICHLIFORMES: Cichlidae (part 5) · 1 The ETYFish Project © Christopher Scharpf and Kenneth J. Lazara COMMENTS: v. 10.0 - 11 May 2021 Order CICHLIFORMES (part 5 of 8) Family CICHLIDAE Cichlids (part 5 of 7) Subfamily Pseudocrenilabrinae African Cichlids (Palaeoplex through Yssichromis) Palaeoplex Schedel, Kupriyanov, Katongo & Schliewen 2020 palaeoplex, a key concept in geoecodynamics representing the total genomic variation of a given species in a given landscape, the analysis of which theoretically allows for the reconstruction of that species’ history; since the distribution of P. palimpsest is tied to an ancient landscape (upper Congo River drainage, Zambia), the name refers to its potential to elucidate the complex landscape evolution of that region via its palaeoplex Palaeoplex palimpsest Schedel, Kupriyanov, Katongo & Schliewen 2020 named for how its palaeoplex (see genus) is like a palimpsest (a parchment manuscript page, common in medieval times that has been overwritten after layers of old handwritten letters had been scraped off, in which the old letters are often still visible), revealing how changes in its landscape and/or ecological conditions affected gene flow and left genetic signatures by overwriting the genome several times, whereas remnants of more ancient genomic signatures still persist in the background; this has led to contrasting hypotheses regarding this cichlid’s phylogenetic position Pallidochromis Turner 1994 pallidus, pale, referring to pale coloration of all specimens observed at the time; chromis, a name -
Phylogenetic Congruence Between Lake Tanganyika Tropheine Cichlids and Their Monogenean Flatworm Parasites
CORE Metadata, citation and similar papers at core.ac.uk Provided by Ghent University Academic Bibliography www.nature.com/scientificreports OPEN Hidden biodiversity in an ancient lake: phylogenetic congruence between Lake Tanganyika Received: 29 January 2015 Accepted: 23 July 2015 tropheine cichlids and their Published: 03 September 2015 monogenean flatworm parasites Maarten P. M. Vanhove1,2,3,4,†, Antoine Pariselle5,‡, Maarten Van Steenberge1,2,6, Joost A. M. Raeymaekers1, Pascal I. Hablützel1,¶, Céline Gillardin1,φ, Bart Hellemans1, Floris C. Breman2, Stephan Koblmüller6, Christian Sturmbauer6, Jos Snoeks1,2, Filip A. M. Volckaert1 & Tine Huyse1,2 The stunning diversity of cichlid fishes has greatly enhanced our understanding of speciation and radiation. Little is known about the evolution of cichlid parasites. Parasites are abundant components of biodiversity, whose diversity typically exceeds that of their hosts. In the first comprehensive phylogenetic parasitological analysis of a vertebrate radiation, we study monogenean parasites infecting tropheine cichlids from Lake Tanganyika. Monogeneans are flatworms usually infecting the body surface and gills of fishes. In contrast to many other parasites, they depend only on a single host species to complete their lifecycle. Our spatially comprehensive combined nuclear-mitochondrial DNA dataset of the parasites covering almost all tropheine host species (N = 18), reveals species-rich parasite assemblages and shows consistent host-specificity. Statistical comparisons of host and parasite phylogenies based on distance and topology-based tests demonstrate significant congruence and suggest that host-switching is rare. Molecular rate evaluation indicates that species of Cichlidogyrus probably diverged synchronically with the initial radiation of the tropheines. They further diversified through within-host speciation into an overlooked species radiation. -
Coptodon Zillii (Redbelly Tilapia) Ecological Risk Screening Summary
Redbelly Tilapia (Coptodon zillii) Ecological Risk Screening Summary U.S. Fish and Wildlife Service, May 2019 Revised, September 2019 Web Version, 11/18/2019 Photo: J. Hoover, Waterways Experiment Station, U.S. Army Corp of Engineers. Public domain. Available: https://nas.er.usgs.gov/queries/factsheet.aspx?SpeciesID=485. (May 2019). 1 Native Range and Status in the United States Native Range From Froese and Pauly (2019a): “Africa and Eurasia: South Morocco, Sahara, Niger-Benue system, rivers Senegal, Sassandra, Bandama, Boubo, Mé, Comoé, Bia, Ogun and Oshun, Volta system, Chad-Shari system [Teugels and Thys van den Audenaerde 1991], middle Congo River basin in the Ubangi, Uele [Thys van den Audenaerde 1964], Itimbiri, Aruwimi [Thys van den Audenaerde 1964; Decru 2015], Lindi- 1 Tshopo [Decru 2015] and Wagenia Falls [Moelants 2015] in Democratic Republic of the Congo, Lakes Albert [Thys van den Audenaerde 1964] and Turkana, Nile system and Jordan system [Teugels and Thys van den Audenaerde 1991].” Froese and Pauly (2019a) list the following countries as part of the native range of Coptodon zillii: Algeria, Benin, Cameroon, Central African Republic, Chad, Democratic Republic of the Congo, Egypt, Ghana, Guinea, Guinea-Bissau, Israel, Ivory Coast, Jordan, Kenya, Lebanon, Liberia, Mali, Mauritania, Morocco, Niger, Nigeria, Senegal, Sierra Leone, Sudan, Togo, Tunisia, Uganda, and Western Sahara. Status in the United States From NatureServe (2019): “Introduced and established in ponds and other waters in Maricopa County, Arizona; irrigation canals in Coachella, Imperial, and Palo Verde valleys, California; and headwater springs of San Antonio River, Bexar County, Texas; common (Page and Burr 1991). Established also in the Carolinas, Hawaii, and possibly in Florida and Nevada (Robins et al. -
Depth Segregation and Diet Disparity Revealed by Stable Isotope Analyses
Hata et al. Zoological Letters (2015) 1:15 DOI 10.1186/s40851-015-0016-1 RESEARCH ARTICLE Open Access Depth segregation and diet disparity revealed by stable isotope analyses in sympatric herbivorous cichlids in Lake Tanganyika Hiroki Hata1*, Jyunya Shibata2,3, Koji Omori2, Masanori Kohda4 and Michio Hori5 Abstract Background: Lake Tanganyika in the African Great Rift Valley is known as a site of adaptive radiation in cichlid fishes. Diverse herbivorous fishes coexist on a rocky littoral of the lake. Herbivorous cichlids have acquired multiple feeding ecomorphs, including grazer, browser, scraper, and scooper, and are segregated by dietary niche. Within each ecomorph, however, multiple species apparently coexist sympatrically on a rocky slope. Previous observations of their behavior show that these cichlid species inhabit discrete depths separated by only a few meters. In this paper, using carbon (C) and nitrogen (N) stable isotope ratios as markers, we followed the nutritional uptake of cichlid fishes from periphyton in their feeding territories at various depths. Results: δ15N of fish muscles varied among cichlid ecomorphs; this was significantly lower in grazers than in browsers and scoopers, although δ15N levels in periphyton within territories did not differ among territorial species. This suggests that grazers depend more directly on primary production of periphyton, while others ingest animal matter from higher trophic levels. With respect to δ13C, only plankton eaters exhibited lower values, suggesting that these fishes depend on production of phytoplankton, while the others depend on production of periphyton. Irrespective of cichlid ecomorph, δ13C of periphyton correlated significantly with habitat depth, and decreased as habitat depth became deeper. -
New Fossils of Cichlids from the Miocene of Kenya and Clupeids from the Miocene of Greece (Teleostei)
The importance of articulated skeletons in the identification of extinct taxa: new fossils of cichlids from the Miocene of Kenya and clupeids from the Miocene of Greece (Teleostei) Dissertation zur Erlangung des Doktorgrades an der Fakultät für Geowissenschaften der Ludwig-Maximilians-Universität München Vorgelegt von Charalampos Kevrekidis München, 28. September 2020 Erstgutacher: Prof. Dr. Bettina Reichenbacher Zweitgutacher: PD Dr. Gertrud Rößner Tag der mündlichen Prüfung: 08.02.2021 2 Statutory declaration and statement I hereby confirm that my Thesis entitled “Fossil fishes from terrestrial sediments of the Miocene of Africa and Europe”, is the result of my own original work. Furthermore, I certify that this work contains no material which has been accepted for the award of any other degree or diploma in my name, in any university and, to the best of my knowledge and belief, contains no material previously published or written by another person, except where due reference has been made in the text. In addition, I certify that no part of this work will, in the future, be used in a submission in my name, for any other degree or diploma in any university or other tertiary institution without the prior approval of the Ludwig-Maximilians-Universität München. München, 21.09.2020 Charalampos Kevrekidis 3 Abstract Fishes are important components of aquatic faunas, but our knowledge on the fossil record of some taxa, relative to their present diversity, remains poor. This can be due to a rarity of such fossils, as is the case for the family Cichlidae (cichlids). Another impediment is the rarity of well-preserved skeletons of fossil fishes.