Evidential Critieria of Homology for Comparative Psychology Abstract
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State of Connecticut Department of Public Health
STATE OF CONNECTICUT DEPARTMENT OF PUBLIC HEALTH VERIFICATION OF DOCTORAL PROGRAM Applicant: Please complete the top portion of this form and forward it to the university where you received your doctoral degree. Name: _______________________________ Student identification number: __________________ University name and location: ________________________________________________________ TO BE COMPLETED BY EDUCATIONAL INSTITUTION ONLY The University must complete the remainder of this form for the above referenced applicant and return the form directly to the address listed below. The applicant completed a doctoral program of study within the Department of __________________ Please specify type of psychology program: clinical psychology counseling psychology school psychology other: ___________________________________________________ Was the candidate's program of study APA accredited at the time of the applicant’s completion? YES NO Did this applicant complete a course of studies encompassing a minimum of three academic years of full- time graduate study, of which a minimum of one academic year of full-time academic graduate study in psychology in residence at the institution granting the doctoral degree? YES NO Did this applicant complete coursework in scientific methods as follows (Check all that apply and indicate number of credit hours): Coursework No. of Credit Hours Research design and methodology Statistics and psychometrics Biological bases of behavior, for example, physiological psychology, comparative psychology, neuro-psychology, -
Transformations of Lamarckism Vienna Series in Theoretical Biology Gerd B
Transformations of Lamarckism Vienna Series in Theoretical Biology Gerd B. M ü ller, G ü nter P. Wagner, and Werner Callebaut, editors The Evolution of Cognition , edited by Cecilia Heyes and Ludwig Huber, 2000 Origination of Organismal Form: Beyond the Gene in Development and Evolutionary Biology , edited by Gerd B. M ü ller and Stuart A. Newman, 2003 Environment, Development, and Evolution: Toward a Synthesis , edited by Brian K. Hall, Roy D. Pearson, and Gerd B. M ü ller, 2004 Evolution of Communication Systems: A Comparative Approach , edited by D. Kimbrough Oller and Ulrike Griebel, 2004 Modularity: Understanding the Development and Evolution of Natural Complex Systems , edited by Werner Callebaut and Diego Rasskin-Gutman, 2005 Compositional Evolution: The Impact of Sex, Symbiosis, and Modularity on the Gradualist Framework of Evolution , by Richard A. Watson, 2006 Biological Emergences: Evolution by Natural Experiment , by Robert G. B. Reid, 2007 Modeling Biology: Structure, Behaviors, Evolution , edited by Manfred D. Laubichler and Gerd B. M ü ller, 2007 Evolution of Communicative Flexibility: Complexity, Creativity, and Adaptability in Human and Animal Communication , edited by Kimbrough D. Oller and Ulrike Griebel, 2008 Functions in Biological and Artifi cial Worlds: Comparative Philosophical Perspectives , edited by Ulrich Krohs and Peter Kroes, 2009 Cognitive Biology: Evolutionary and Developmental Perspectives on Mind, Brain, and Behavior , edited by Luca Tommasi, Mary A. Peterson, and Lynn Nadel, 2009 Innovation in Cultural Systems: Contributions from Evolutionary Anthropology , edited by Michael J. O ’ Brien and Stephen J. Shennan, 2010 The Major Transitions in Evolution Revisited , edited by Brett Calcott and Kim Sterelny, 2011 Transformations of Lamarckism: From Subtle Fluids to Molecular Biology , edited by Snait B. -
Evolution by Natural Selection, Formulated Independently by Charles Darwin and Alfred Russel Wallace
UNIT 4 EVOLUTIONARY PATT EVOLUTIONARY E RNS AND PROC E SS E Evolution by Natural S 22 Selection Natural selection In this chapter you will learn that explains how Evolution is one of the most populations become important ideas in modern biology well suited to their environments over time. The shape and by reviewing by asking by applying coloration of leafy sea The rise of What is the evidence for evolution? Evolution in action: dragons (a fish closely evolutionary thought two case studies related to seahorses) 22.1 22.4 are heritable traits that with regard to help them to hide from predators. The pattern of evolution: The process of species have changed evolution by natural and are related 22.2 selection 22.3 keeping in mind Common myths about natural selection and adaptation 22.5 his chapter is about one of the great ideas in science: the theory of evolution by natural selection, formulated independently by Charles Darwin and Alfred Russel Wallace. The theory explains how T populations—individuals of the same species that live in the same area at the same time—have come to be adapted to environments ranging from arctic tundra to tropical wet forest. It revealed one of the five key attributes of life: Populations of organisms evolve. In other words, the heritable characteris- This chapter is part of the tics of populations change over time (Chapter 1). Big Picture. See how on Evolution by natural selection is one of the best supported and most important theories in the history pages 516–517. of scientific research. -
Many but Not All Lineage-Specific Genes Can Be Explained by Homology Detection Failure
bioRxiv preprint doi: https://doi.org/10.1101/2020.02.27.968420; this version posted April 14, 2020. The copyright holder for this preprint (which was not certified by peer review) is the author/funder, who has granted bioRxiv a license to display the preprint in perpetuity. It is made available under aCC-BY 4.0 International license. Many but not all lineage-specific genes can be explained by homology detection failure Caroline M. Weisman1, Andrew W. Murray1, Sean R. Eddy1,2,3 1 Department of Molecular & Cellular Biology, 2 Howard Hughes Medical Institute, 3 John A. Paulson School of Engineering and Applied Sciences, Harvard University, Cambridge MA, USA Abstract Genes for which homologs can be detected only in a limited group of evolutionarily related species, called “lineage-specific genes,” are pervasive: essentially every lineage has them, and they often comprise a sizable fraction of the group’s total genes. Lineage-specific genes are often interpreted as “novel” genes, representing genetic novelty born anew within that lineage. Here, we develop a simple method to test an alternative null hypothesis: that lineage-specific genes do have homologs outside of the lineage that, even while evolving at a constant rate in a novelty-free manner, have merely become undetectable by search algorithms used to infer homology. We show that this null hypothesis is sufficient to explain the lack of detected homologs of a large number of lineage-specific genes in fungi and insects. However, we also find that a minority of lineage-specific genes in both clades are not well-explained by this novelty- free model. -
International Journal of Comparative Psychology
eScholarship International Journal of Comparative Psychology Title The State of Comparative Psychology Today: An Introduction to the Special Issue Permalink https://escholarship.org/uc/item/0mn8n8bc Journal International Journal of Comparative Psychology, 31(0) ISSN 0889-3675 Authors Abramson, Charles I. Hill, Heather M. Publication Date 2018 License https://creativecommons.org/licenses/by/4.0/ 4.0 Peer reviewed eScholarship.org Powered by the California Digital Library University of California 2018, 31 Charles Abramson Special Issue Editor Peer-reviewed* The State of Comparative Psychology Today: An Introduction to the Special Issue Charles I. Abramson 1 and Heather M. Hill 2 1 Oklahoma State University, U.S.A. 2 St. Mary’s University, U.S.A. Comparative psychology has long held an illustrious position in the pantheon of psychology. Depending on who you speak with, comparative psychology is as strong as ever or in deep decline. To try and get a handle on this the International Journal of Comparative Psychology has commissioned a special issue on the State of Comparative Psychology Today. Many of the articles in this issue were contributed by emanate comparative psychologists. The topics are wide ranging and include the importance of incorporating comparative psychology into the classroom, advances in automating, comparative cognition, philosophical perspectives surrounding comparative psychology, and issues related to comparative methodology. Of special interest is that the issue contains a listing of comparative psychological laboratories and a list of comparative psychologists who are willing to serve as professional mentors to students interested in comparative psychology. We hope that this issue can serve as a teaching resource for anyone interested in comparative psychology whether as part of a formal course in comparative psychology or as independent readings. -
Journal of Comparative Psychology Inaccessibility of Reinforcement Increases Persistence and Signaling Behavior in the Fox Squirrel (Sciurus Niger) Mikel M
Journal of Comparative Psychology Inaccessibility of Reinforcement Increases Persistence and Signaling Behavior in the Fox Squirrel (Sciurus niger) Mikel M. Delgado and Lucia F. Jacobs Online First Publication, April 14, 2016. http://dx.doi.org/10.1037/com0000021 CITATION Delgado, M. M., & Jacobs, L. F. (2016, April 14). Inaccessibility of Reinforcement Increases Persistence and Signaling Behavior in the Fox Squirrel (Sciurus niger). Journal of Comparative Psychology. Advance online publication. http://dx.doi.org/10.1037/com0000021 Journal of Comparative Psychology © 2016 American Psychological Association 2016, Vol. 130, No. 3, 000 0735-7036/16/$12.00 http://dx.doi.org/10.1037/com0000021 Inaccessibility of Reinforcement Increases Persistence and Signaling Behavior in the Fox Squirrel (Sciurus niger) Mikel M. Delgado and Lucia F. Jacobs University of California, Berkeley Under natural conditions, wild animals encounter situations where previously rewarded actions do not lead to reinforcement. In the laboratory, a surprising omission of reinforcement induces behavioral and emotional responses described as frustration. Frustration can lead to aggressive behaviors and to the persistence of noneffective responses, but it may also lead to new behavioral responses to a problem, a potential adaptation. We assessed the responses to inaccessible reinforcement in free-ranging fox squirrels (Sciurus niger). We trained squirrels to open a box to obtain food reinforcement, a piece of walnut. After 9 training trials, squirrels were tested in 1 of 4 conditions: a control condition with the expected reward, an alternative reinforcement (a piece of dried corn), an empty box, or a locked box. We measured the presence of signals suggesting arousal (e.g., tail flags and tail twitches) and found that squirrels performed fewer of these behaviors in the control condition and increased certain behaviors (tail flags, biting box) in the locked box condition, compared to other experimental conditions. -
The Behavioral Neuroscientist and Comparative Psychologist
BUSINESS NAME The Behavioral Neuroscientist and Comparative Psychologist Division 6, American Volume 25, Issue 2 Fall/Winter, 2010 Psychological Association Editor A Message From Division 6 President Gordon Burghardt David J. Bucci, PhD Dartmouth College As incoming president of Division 6 I was not totally aware of what would be entailed. Now that I am in the thick of helping plan the APA convention program, facilitating the operation of our various Division President committees such as Membership, Fellows, Awards, Gordon Burghhardt, PhD Students, and others, I see that I, along with many other Div. 6 members, take for granted the ‗gift‘ we have as one of the oldest APA divisions and the sup- port and resources available to us from APA. None- theless, there are problems that we need to discuss both within and across the many APA Divisions. In Inside this issue: this and future newsletter essays I want to raise is- sues, present proposals, and try to elicit some feed- back and dialogue that can be discussed within our Message from 1, 4- division listserv [email protected] or through President 5 personal exchanges at [email protected]. In any event, vigorous conversations seem to be needed. Membership Crisis & the Scientific Imperative APA council, but only one seat due to our small Division 6 2-3 The Division Services office of APA is concerned membership. Still, our impact on the field, as Officers about the health of all divisions, as many APA mem- shown by articles and research blurbs in the APA bers are not affiliating with any division and those Monitor and the flagship American Psychologist, belie remaining in divisions are rapidly aging and member- our small numbers. -
Regulations of Connecticut State Agencies Psychologist Educational and Work Experience Requirements
Regulations of Connecticut State Agencies Psychologist Educational and Work Experience Requirements Sec. 20-188-1. Definitions (a) "Accreditation by the American Psychological Association" shall mean that: (1) the program held provisional accreditation status or full accreditation status throughout the period of the applicant's enrollment, provided said provisional status subsequently progressed without interruption to full accreditation; or (2) the program held probationary accreditation status during the applicant's enrollment and, upon termination of said probationary status, subsequently achieved full accreditation. (b) "Recognized regional accrediting body" shall mean one of the following accrediting bodies: New England Association of Schools and Colleges; Middle States Commission on Higher Education; North Central Association of Colleges and Schools; Northwest Association of Colleges and Universities; Southern Association of Colleges and Schools; and Western Association of Schools and Colleges. (c) "Accreditation by a recognized regional accrediting body" shall mean that: (1) the institution held accreditation status or candidacy for accreditation throughout the period of the applicant's enrollment, provided said candidacy status subsequently progressed without interruption to full accreditation; or (2) the institution held accreditation status under probation or show-cause order during the applicant's enrollment and, upon termination of said probation or show-cause order, accreditation status was maintained without interruption. -
Convergent Evolution
Exploring the KU Natural History Museum Convergent Evolution Target Audience: Middle school and above Differentiated Instruction Summary Strategy Levels Content/Process/Product Grouping(s) Learning modalities Whole group • Level 1 – Visual (spatial) Small groups Process Cubing Level 2 – Kinesthetic (physical) Peer partners • Product • Level 3 – Verbal (linguistic) Homogeneous Heterogeneous * Varied grouping options can be used for this activity, depending on student needs and chaperone ability. Objectives: Explore examples of convergent evolution in vertebrates. Pre-assessment/Prior Knowledge: Prior to their visit, students should be familiar with the idea of convergent evolution, overall evolutionary relationships/classification of vertebrate groups and basic anatomy of those groups. Activity Description: Students explore the idea of convergent evolution through museum exhibits through different learning modalities. Materials Needed: • Student o Cubes (three levels, see attached) o Paper and pencils (alternatively you could use flipchart paper and markers, whiteboards and dry erase markers) o Optional (cell phones or other recording device for visual or kinesthetic levels) Note: Format to record/present findings determined by individual teacher. Provide clear instructions about expectations for documenting participation, particularly for verbal/spatial and body/kinesthetic levels (e.g. stage direction, audio/video recording). • Teacher o Content Outline o Cube labels o Cube template Content: Convergence Overview Convergent evolution refers to the similarities in biological traits that arise independently in organisms that are not closely related, e.g. wings in birds, bats and insects. Similarity among organisms and their structures that was not inherited from a common ancestor is considered to be homoplasy. This can be contrasted with homology, which refers to similarity of traits due to common ancestry. -
Systematic Morphology of Fishes in the Early 21St Century
Copeia 103, No. 4, 2015, 858–873 When Tradition Meets Technology: Systematic Morphology of Fishes in the Early 21st Century Eric J. Hilton1, Nalani K. Schnell2, and Peter Konstantinidis1 Many of the primary groups of fishes currently recognized have been established through an iterative process of anatomical study and comparison of fishes that has spanned a time period approaching 500 years. In this paper we give a brief history of the systematic morphology of fishes, focusing on some of the individuals and their works from which we derive our own inspiration. We further discuss what is possible at this point in history in the anatomical study of fishes and speculate on the future of morphology used in the systematics of fishes. Beyond the collection of facts about the anatomy of fishes, morphology remains extremely relevant in the age of molecular data for at least three broad reasons: 1) new techniques for the preparation of specimens allow new data sources to be broadly compared; 2) past morphological analyses, as well as new ideas about interrelationships of fishes (based on both morphological and molecular data) provide rich sources of hypotheses to test with new morphological investigations; and 3) the use of morphological data is not limited to understanding phylogeny and evolution of fishes, but rather is of broad utility to understanding the general biology (including phenotypic adaptation, evolution, ecology, and conservation biology) of fishes. Although in some ways morphology struggles to compete with the lure of molecular data for systematic research, we see the anatomical study of fishes entering into a new and exciting phase of its history because of recent technological and methodological innovations. -
Thinking Pigs: Cognition, Emotion, and Personality
WellBeing International WBI Studies Repository 2016 Thinking Pigs: Cognition, Emotion, and Personality Lori Marino The Kimmela Center for Animal Advocacy Christina M. Colvin Emory University Follow this and additional works at: https://www.wellbeingintlstudiesrepository.org/mammal Part of the Animals Commons, Animal Studies Commons, and the Zoology Commons Recommended Citation Marino, Lori and Colvin, Christina M., "Thinking Pigs: Cognition, Emotion, and Personality" (2016). Mammalogy Collection. 1. https://www.wellbeingintlstudiesrepository.org/mammal/1 This material is brought to you for free and open access by WellBeing International. It has been accepted for inclusion by an authorized administrator of the WBI Studies Repository. For more information, please contact [email protected]. THINKING PIGS: Cognition, Emotion, and Personality © Farm Sanctuary AN EXPLORATION OF THE COGNITIVE COMPLEXITY OF SUS DOMESTICUS, THE DOMESTIC PIG By Lori Marino and Christina M. Colvin Based on: Marino L & Colvin CM (2015). Thinking pigs: A comparative review of cognition, emotion and personality in Sus domes- ticus. International Journal of Comparative Psychology, 28: uclapsych_ijcp_23859. Retrieved from: https://escholarship.org/uc/ item/8sx4s79c © Kimmela Center for Animal Advocacy Thinking Pigs: Cognition, Emotion, and Personality AN EXPLORATION OF THE COGNITIVE COMPLEXITY OF SUS DOMESTICUS, THE DOMESTIC PIG he pig of our imagination is the Tom Sawyer, the Scarlett O’Hara, the TABLE OF CONTENTS TFalstaff of the farm animal world: clever, charismatic, mischievous, and gluttonous. References to road hogs, going whole hog or hog wild, 3 A Pig’s World pigging out, and casting pearls before swine pepper our everyday language. In the Chinese zodiac and literature, the pig characterizes strong 4 Object Discrimination emotions, lack of restraint, and virility. -
Fins, Limbs, and Tails: Outgrowths and Axial Patterning in Vertebrate Evolution Michael I
Review articles Fins, limbs, and tails: outgrowths and axial patterning in vertebrate evolution Michael I. Coates1* and Martin J. Cohn2 Summary Current phylogenies show that paired fins and limbs are unique to jawed verte- brates and their immediate ancestry. Such fins evolved first as a single pair extending from an anterior location, and later stabilized as two pairs at pectoral and pelvic levels. Fin number, identity, and position are therefore key issues in vertebrate developmental evolution. Localization of the AP levels at which develop- mental signals initiate outgrowth from the body wall may be determined by Hox gene expression patterns along the lateral plate mesoderm. This regionalization appears to be regulated independently of that in the paraxial mesoderm and axial skeleton. When combined with current hypotheses of Hox gene phylogenetic and functional diversity, these data suggest a new model of fin/limb developmental evolution. This coordinates body wall regions of outgrowth with primitive bound- aries established in the gut, as well as the fundamental nonequivalence of pectoral and pelvic structures. BioEssays 20:371–381, 1998. 1998 John Wiley & Sons, Inc. Introduction over and again to exemplify fundamental concepts in biological Vertebrate appendages include an amazing diversity of form, theory. The striking uniformity of teleost pectoral fin skeletons from the huge wing-like fins of manta rays or the stumpy limbs of illustrated Geoffroy Saint-Hilair’s discussion of ‘‘special analo- frogfishes, to ichthyosaur paddles, the extraordinary fingers of gies,’’1 while tetrapod limbs exemplified Owen’s2 related concept aye-ayes, and the fin-like wings of penguins. The functional of ‘‘homology’’; Darwin3 then employed precisely the same ex- diversity of these appendages is similarly vast and, in addition to ample as evidence of evolutionary descent from common ances- various modes of locomotion, fins and limbs are also used for try.