Direct-Acting Antivirals
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Design and Synthesis of Hepatitis C Virus NS3 Protease Inhibitors
Digital Comprehensive Summaries of Uppsala Dissertations from the Faculty of Pharmacy 197 Design and Synthesis of Hepatitis C Virus NS3 Protease Inhibitors Targeting Different Genotypes and Drug-Resistant Variants ANNA KARIN BELFRAGE ACTA UNIVERSITATIS UPSALIENSIS ISSN 1651-6192 ISBN 978-91-554-9166-6 UPPSALA urn:nbn:se:uu:diva-243317 2015 Dissertation presented at Uppsala University to be publicly examined in B41 BMC, Husargatan 3, Uppsala, Friday, 27 March 2015 at 09:15 for the degree of Doctor of Philosophy (Faculty of Pharmacy). The examination will be conducted in Swedish. Faculty examiner: Ulf Ellervik (Lunds tekniska högskola). Abstract Belfrage, A. K. 2015. Design and Synthesis of Hepatitis C Virus NS3 Protease Inhibitors. Targeting Different Genotypes and Drug-Resistant Variants. Digital Comprehensive Summaries of Uppsala Dissertations from the Faculty of Pharmacy 197. 108 pp. Uppsala: Acta Universitatis Upsaliensis. ISBN 978-91-554-9166-6. Since the first approved hepatitis C virus (HCV) NS3 protease inhibitors in 2011, numerous direct acting antivirals (DAAs) have reached late stages of clinical trials. Today, several combination therapies, based on different DAAs, with or without the need of pegylated interferon-α injection, are available for chronic HCV infections. The chemical foundation of the approved and late-stage HCV NS3 protease inhibitors is markedly similar. This could partly explain the cross-resistance that have emerged under the pressure of NS3 protease inhibitors. The first-generation NS3 protease inhibitors were developed to efficiently inhibit genotype 1 of the virus and were less potent against other genotypes. The main focus in this thesis was to design and synthesize a new class of 2(1H)-pyrazinone based HCV NS3 protease inhibitors, structurally dissimilar to the inhibitors evaluated in clinical trials or approved, potentially with a unique resistance profile and with a broad genotypic coverage. -
Bristol-Myers Setback Another Blow to Hep C Field
August 24, 2012 Bristol-Myers setback another blow to hep C field Joanne Fagg The once-crowded field of candidates jostling to be part of the first all-oral hepatitis C antiviral cocktail got decidedly emptier today with the news that Bristol-Myers Squibb had cancelled development of its $2bn asset BMS-986094. The safety worries that had triggered a clinical hold on the drug turned out too deep to accept – a death in the original heart failure patient, plus nine other hospitalised subjects resulting from heart and kidney toxicity. Excitement around the space has already dissipated with Gilead Sciences’ seemingly uninterrupted march towards the all-oral holy grail and signs that the untreated population might be smaller than was originally believed. Failure of a closely watched candidate – and indeed one validated by a big pharma deal – will do nothing to reinvigorate the interest of investors whose interest may be turning elsewhere. Hefty price tag The news is not necessarily a setback for the nucleoside NS5B polymerase inhibitor class or for Bristol-Myers, which still has a decent pipeline in spite of some failures (see tables). However, it is another knock to sentiment for developers in the hep C space – at least, the ones that are not called Gilead (Signs are growing that the hep C ship is sailing, August 1, 2012). Hepatitis C nucleoside NS5B polymerase inhibitor pipeline Status Product Company Selected trial IDs NCT01497366 NCT01542788 Phase III GS-7977 Gilead Sciences NCT01604850 NCT01641640 NCT00869661 Phase II RG7128 Gilead Sciences/Roche NCT01057667 NCT01278134 IDX184 Idenix Pharmaceuticals Partial clinical hold Phase I RO5303253 Roche NCT01181024 NCT01371162 RO5428029 Roche NCT01345942 ALS-2200 Vertex Pharmaceuticals NCT01590407 ALS-2158 Vertex Pharmaceuticals NCT01554085 As if further confirmation were needed, California-based Gilead is now decisively in the lead to get a much- heralded all-oral hepatitis C combination to the market and address those patients thought to be awaiting a therapy free of interferon and its side effects. -
Pessimism Infects Achillion As FDA Sustains Clinical Hold
September 30, 2013 Pessimism infects Achillion as FDA sustains clinical hold Jonathan Gardner Another disappointment for the hepatitis C project sovaprevir may have Achillion Pharmaceuticals feeling like it is starting all over again. At a time when the Connecticut-based group could be riding the bio-runup heading into the AASLD liver meeting in November, executives disclosed that the FDA would not lift the clinical hold imposed after liver enzyme elevations were detected in a drug interaction study (Another hep C safety worry buffets Achillion’s lead, July 2, 2013). Shares crashed 55% to a four-year low of $3.28 in early trading today on the news, released after Friday’s market close. Acknowledging the setback, executives signalled that they were prepared to move on, with phase II testing of alternative treatment regimens imminent; while that may be an attempt to reassure, it adds months if not years to investors’ assumptions about when Achillion will start generating a royalty stream. Just like starting over With first approval decisions for Gilead Sciences’ expected $11bn drug sofosbuvir due by December and combinations from Bristol-Myers Squibb and AbbVie making strides forward, the all-oral market looks to be well served by 2017. This year is the likely earliest point that any of Achillion’s assets could begin generating sales; in 2017, Gilead’s sofosbuvir-centred franchise is expected to yield $8.2bn in sales, according to EvaluatePharma's consensus. However, Achillion executives sought to portray the company's hep C activities as broader than sovaprevir, a protease inhibitor, highlighting the NS5A inhibitor ACH-3102, a second protease inhibitor, ACH-2684, which will report combination tests with ‘3102 next year, and a uridine-analog nucleotide, ACH-3422, which could be in the clinic next year. -
Meeting Report: 26Th International Conference on Antiviral Research Q
Antiviral Research 100 (2013) 276–285 Contents lists available at ScienceDirect Antiviral Research journal homepage: www.elsevier.com/locate/antiviral Review Meeting report: 26th International Conference on Antiviral Research q R. Anthony Vere Hodge Vere Hodge Antivirals Ltd, Old Denshott, Leigh, Reigate, Surrey, UK article info abstract Article history: The 26th International Conference on Antiviral Research (ICAR) was held in San Francisco, California from Received 2 August 2013 May 11 to 15, 2013. This article summarizes the principal invited lectures at the meeting. The opening Accepted 8 August 2013 symposium on the legacy of the late Antonín Holy´ included presentations on his pioneering work with Available online 21 August 2013 nucleotide analogs, which led to the development of several antiviral drugs including tenofovir. This drug has transformed the treatment of HIV infection and has recently become the first-line therapy for chronic Keywords: hepatitis B. The Gertrude Elion Award lecturer described the anti-HIV activities of the CCR5 inhibitor Human immunodeficiency virus cenicriviroc and the reverse transcriptase inhibitor festinavirÒ, and also reviewed the evaluation of bio- Hepatitis B degradable nanoparticles with adjuvant activity. The William Prusoff Award winner reported on the cre- Hepatitis C Herpesviruses ation of NAOMI, a computer model with 21 enzymes to predict the activity of nucleoside analogs against Antiviral therapy hepatitis C virus (HCV). Other invited lecturers discussed the development of countermeasures against severe dengue and the potential of RNA virus capping and repair enzymes as drug targets. Topics in the clinical symposium included the current status of the anti-HCV compounds sovaprevir, ACH-3102, miravirsen and ALS-2200; the evaluation of single-tablet regimens for HIV infection; and the investiga- tion of cytomegalovirus resistance to CMX001. -
Tuesday 6 June
Tuesday 6 June 14:00- Registration at the Conference Venue 18:00 19:00- Opening ceremony, welcome reception and dinner 22:00 Wednesday 7 June 08:00- Registration 08:45 08:45- Welcome and Introduction 09:00 09:00- Benefit-risk profile of medicinal Chair: Oscar 10:30 products Della Pasqua Overview and implementation of multi criteria 09:00- Praveen decision analysis (MCDA) for benefit-risk 09:30 Thokala assessment European regulatory views on benefit-risk 09:30- Andreas assessment methodologies - role of MCDA and 10:00 Kouroumalis other model-based approaches Current practices and gaps in benefit-risk 10:00- Kevin Marsh assessment: opportunities for combining MCDA 10:30 with model-based approaches 10:30- Coffee break, Poster and Software session I 12:00 Page | 1 Posters in Group I (with poster numbers starting with I-) are accompanied by their presenter 12:00- Benefit-risk profile of medicinal Chair: Mats 12:40 products, continued Karlsson 12:00- Neeraj Model-Informed Drug Development (MIDD) for 12:20 Gupta ixazomib, an oral proteasome inhibitor Simulation analysis of absolute lymphocytes 12:20- Nadia counts (ALC) and relapse rate (RR) following 12:40 Terranova cladribine (re-)treatment rules in subjects with relapsing-remitting multiple sclerosis (RRMS) 12:40- Announcement for ACoP8 (2017) Jin Jin 12:45 12:45- Lunch 14:10 14:10- Chair: Lutz Scaling of PD in paediatrics 15:10 Harnisch Scaling pharmacodynamics in children: Lessons 14:10- Joseph from immunology, infectious diseases and 14:50 Standing critical care Scaling renal function in -
HCV Treatment • Characteristics of DAA Classes
HCV UPDATE Treatment: The Next Wave Access: Myths & Facts NASTAD National Technical Assistance Meeting October 2015 Tracy Swan HCV Treatment • Characteristics of DAA Classes • Next-generation: FDCs • Trends: 3somes and Quickies • HCV Treatment in HIV/HCV DAA CLASSES NON-NUCLEOSIDE POLYMERASE INHIBITORS (Dasabuvir): G1 only, further development/need?? PROTEASE INHIBITORS (Paritaprevir/r, Olysio): Usually G1 and G4, tendency for DDIs, possibly more side effects, resistance may not always be persistent—next generation might be pan-genotypic DAA CLASSES NS5A INHIBITORS (Daclatasvir, Ledipasvir, Ombitasvir, Velpatasvir) : pan/multi-genotypic (less information in G4, G5 and G6)—some DDIs, resistance can persist for >2 years stop them from working--next generation more potent, active against resistance? NUCLEOSIDE/TIDE POLYMERASE INHIBITORS (Sofosbuvir): pan/multi-genotypic (less information in G4, G5 and G6), few DDIs, resistance does not seem to be a major problem; a few more are finally in development Fixed-Dose Combinations (FDCs) WHAT’S HERE NOW…. Sofosbuvir + Ledipasvir Paritaprevir/r + Ombitasvir, w/ Dasabuvir WHAT’S COMING in 2016…. Grazoprevir + Elbasvir Sofosbuvir+ Velpatasvir What’s Coming in 2016 once daily DAA fixed-dose combinations, 12 weeks* Grazoprevir/Elbasvir adults w/ G 1,4 and 6 (TX- naive or -experienced, HIV/HCV; in people w/ cirrhosis or ESRD, and w/OST) ---cure rates generally >90% Sofosbuvir/Velpatasvir adults with all HCV genotypes (TX-naive or -experienced, people with cirrhosis) ---cure rates generally >90% *some -
HCV Eradication with Direct Acting Antivirals (Daas)?
HCV eradication with direct acting antivirals (DAAs)? Emilie Estrabaud Service d’Hépatologie et INSERM UMR1149, AP-HP Hôpital Beaujon, Paris, France. [email protected] HCV eradication with direct acting antivirals (DAAs)? HCV replication HCV genome and DAAs targets NS3 inhibitors NS5A inhibitors NS5B inhibitors Take home messages HCV viral cycle Asselah et al. Liver Int. 2015;35 S1:56-64. Direct acting antivirals 5’NTR Structural proteins Nonstructural proteins 3’NTR Metalloprotease Envelope Serine protease Glycoproteins RNA Capsid RNA helicase Cofactors Polymerase C E1 E2 NS1 NS2 NS3 NS4A NS4B NS5A NS5B Protease Inhibitors NS5A Inhibitors Polymerase Inhibitors Telaprevir Daclatasvir Nucs Non-Nucs Boceprevir Ledipasvir Simeprevir ABT-267 Sofosbuvir ABT-333 Faldaprevir GS-5816 VX-135 Deleobuvir Asunaprevir Direct Acting Antivirals: 2015 Asselah et al. Liver Int. 2015;35 S1:56-64. Genetic barrier for HCV direct acting antivirals High Nucleos(t)ide 1 mutation= high cost to Analog Inhibitors fitness, 2-3 additional mutations to increase fitness 2 st generation Protease Inhibitors n Non Nucleos(t)ide Analog Inhibitors : NS5 A Inhibitors 1 st generation Protease Inhibitors 1 mutation= low cost to fitness Low Halfon et al. J Hepatol 2011. Vol 55(1):192-206. HCV protease inhibitors (PI) Inhibit NS3/NS4A serine protease responsible for the processing of the polyprotein 1st generation 1st generation, 2nd wave 2nd generation Resistance low low high barrier Genotype activity 1: 1 a< 1b All except 3 all Drug drug Important Less Less interaction Drugs Boceprevir Simeprevir (Janssen) MK-5172 Telaprevir Faldaprevir (BI) ACH-2684 Paritaprevir (ABT-450)/r (AbbVie) Vedroprevir (Gilead) Vaniprevir (Merck) Sovaprevir (Achillion) Asunaprevir (BMS) NS3/NS4A structure Repositioning of helicase domain Self cleavage Lipid Bilayer Inactive Insertion of the Active carboxy-terminal tail Bartenschlager et al. -
Supplementary Table 1. Available Resistance Fold Change Data
Supplementary Table 1. Available resistance fold change data through literature search for the mutations/polymorphisms identified in the present study Target Mutationa Resistance fold change (compared with wild type of specific genotype)b GT 1a GT 1b GT 2a GT 3a GT 4a GT 5a GT 6a NS3 V36I protease V36L 2ASU [1] 1ASU [1] ≤1.3SIM [2] 1.3SIM [2] ≤1.3SIM [2] 2PAR [3] 1.7SIM [4] V36M 2ASU [1] 2ASU [1] 1.4GLE [5] <2DAN [6] 1.9GRA [5] 2SIM [4] 2PAR [3] >2.5VOX [7] 1.5SIM [8] 0.9VOX [8] Q41H T54A 0.4ASU [1] 0.4ASU [1] 0.8GRA [8] 1.3DAN [4] 0.5PAR [8] 1GLE [5] 0.4SIM [8] 1PAR [3] 0.6VOX [8] 0.6SIM [4] T54G T54S 1ASU [1] 1.2SIM [4] ≤1.3SIM [2] 1GLE [5] 1.1GRA [9] 0.4PAR [3] V55A 1ASU [1] 0.4GLE [5] 1PAR [3] V55G V55I 3ASU [1] 0.2GLE [5] 0.7GRA [5] 1PAR [3] V55P Y56F Q80D Q80G 9.8DAN [4] 1.8SIM [4] Q80K 3ASU [1] 6.5ASU [1] >2.5VOX [7] 8SIM [2] 8SIM [2] 0.9GLE [5] 2.3DAN [4] 1.1GRA [9] 7.7SIM [4] 3PAR [3] 11SIM [10] 0.8VOX [8] Q80L 1ASU [1] 1ASU [1] 2PAR [3] 1.9GRA [8] 1PAR [8] 2.1SIM [4] 1.3VOX [8] Q80M Q80N Q80R 2PAR [3] 4ASU [1] 0.4ASU [8] 3.5DAN [4] 0.1GRA [8] 6.9SIM [4] 0.2PAR [8] 0.5SIM [8] 0.8VOX [8] V107I S122G 1ASU [1] 0.5SIM [10] ≤1SIM [2] S122K S122N 1ASU [1] 1ASU [1] ≤1.3SIM [2] S122R 3ASU [1] 21SIM [10] 1.8GRA [9] S122T 1ASU [1] <1SIM [2] ≤1SIM [2] I132L I132V R155K 21ASU [1] 27ASU [1] 1ASU [8] 22ASU [8] 0.5GLE [5] 410DAN [11] 0.5GLE [5] 2.2GRA [8] 3GRA [9] 0.6GLE [5] 0.1GRA [5] 9.3PAR [8] 37PAR [3] 2.2GRA [12] 5.2PAR [5] 113SIM [8] 86SIM [10] 40PAR [3] >2.8SIM [8] 0.6VOX [8] 0.7VOX [8] 30SIM [4] 0.4VOX [8] 1.5VOX [8] R155P A156V NRASU -
Genotype 1A – Not Recommended for Decompensated Cirrhosis Paritaprevir/Ritonavir + Ombitasvir + Dasabuvir ± Ribavirin for Genotype 1 HCV 100 97 99 94 99 100 89
HCV Therapies: State of the Art Elizabeth Verna, MD, MSc Assistant Professor of Medicine Director of Clinical Research, Transplant Initiative Center for Liver Disease and Transplantation Columbia University Learning Objectives • Evaluate the current treatment options for the management of treatment-naive patients with HCV genotype 1 infection • Assess the current treatment options for the management of treatment-experienced patients with HCV genotype 1 infection • Outline the major issues in the current treatment of HCV infection Evolving Landscape of HCV Therapy HCV Approval Approval Approval Antibody pegIFN- alfa- Ledipasvir/Sofosbuvir Approval Telaprevir Testing 2b OBV/PTV/r + DAS Grazoprevir/Elbasvir Boceprevir Genotype-Specific Sofosbuvir/Velpatasvir Discovery of Approval RGT Approval Approval HCV Ribavirin Simeprevir (Chiron) Daclatasvir Sofosbuvir OBV/PTV/r 1989 1992 1998 2001 2005 2011 2013 2014 2015 2016 Current Benchmark >95% SVR: 6% 12% 20% 40% 54% 65–75% >90% pegIFN-alfa 2b = peg-interferon alfa-2b; RGT = response-guided therapy; OBV/PTV/r + DAS = ombitasvir/paritaprevir and ritonavir + dasabuvir (or 3D). Houghton M. Liver Int. 2009;29(Suppl 1):82-88; Carithers RL, et al. Hepatology. 1997;26(3 Suppl 1):S83-S88; Zeuzem S, et al. N Engl J Med. 2000;343(23):1666-1672; Poynard T, et al. Lancet. 1998;352(9138):1426- 1432; McHutchison JG, et al. N Engl J Med. 1998;339(21):1485-1492; Lindsay KL, et al. Hepatology. 2001;34(2):395-403; Fried MW, et al. N Engl J Med. 2002;347(13):975-982; Manns MP, et al. Lancet. 2001;58(9286):958-965; Poordad F, et al. N Engl J Med. -
Hepatitis C Virus Treatment in the Real World: Optimising Treatment and Access to Therapies
Recent advances in clinical practice Hepatitis C virus treatment in the real world: optimising treatment and access to therapies 1 2 3 4 Editor’s choice Fabien Zoulim, T Jake Liang, Alexander L Gerbes, Alessio Aghemo, Scan to access more 5,6,7,8 9 10 11 free content Sylvie Deuffic-Burban, Geoffrey Dusheiko, Michael W Fried, Stanislas Pol, Jürgen Kurt Rockstroh,12 Norah A Terrault,13 Stefan Wiktor14 For numbered affiliations see ABSTRACT treatments—how can we improve access to diagno- end of article. Chronic HCV infections represent a major worldwide sis and treatment for those patients who need them Correspondence to public health problem and are responsible for a large most? Professor Fabien Zoulim, proportion of liver related deaths, mostly because of Gut brought together some of the leading global Université Lyon 1, Cancer HCV-associated hepatocellular carcinoma and cirrhosis. experts in HCV to discuss these questions and Research Center of Lyon The treatment of HCV has undergone a rapid and point a way forward. The round table, held during (CRCL), INSERM U1052, spectacular revolution. In the past 5 years, the launch of the European Association for the Study of the Hospices Civils de Lyon 69003, ’ France; direct acting antiviral drugs has seen sustained Liver s International Liver Congress 2015, brought [email protected] virological response rates reach 90% and above for clarity to some of these issues and looked into the many patient groups. The new treatments are effective, future pipeline of HCV treatment. This article aims Received 21 July 2015 well tolerated, allow for shorter treatment regimens and to summarise that shared knowledge. -
Direct-Acting Antivirals with Excellent Efficacy and Favourable Safety, Represent a Unique Opportunity to Achieve HCV Elimination
The French and European Approach Towards Hepatitis C Virus Elimination HEPDART 2017 USA December 3rd, 2017 Tarik Asselah (MD, PhD) Professor of Medicine Hepatology, Chief INSERM UMR 1149, Hôpital Beaujon, Clichy, France. Disclosures • Employee of Paris Public University Hospitals (AP-H P, Beaujon’s Hospital) and University of Paris • Principal investigator for research grants : Funds paid to Hospital (AP-HP) • Consultant, expert and speaker for: Abbvie, Bristol-Myers Squibb, Gilead, Janssen, Merck Sharp Dohme, Roche. • Grants from : ANR, CNRS , INSERM , University of Paris, ANRS 2 The French and European Approach Towards Hepatitis C Virus Elimination The goal of this lecture will be to present the situation of HCV in Europe and in France. Direct-acting antivirals with excellent efficacy and favourable safety, represent a unique opportunity to achieve HCV elimination. We will discuss the European & French approach towards Hepatitis Programs and to identify models to achieve Elimination. The French and European Approach Towards Hepatitis C Virus Elimination 1 Great Drugs (Direct-acting antivirals) 2 Epidemiology : Europe & France 3 HCV management : Europe & France 4 Remaining Challenges 5 Take home messages Direct-acting antivirals : a Revolution 5’NTR Structural proteins Nonstructural proteins 3’NTR Metalloprotease Envelope Serine protease RNA Capsid glycoproteins RNA helicase Cofactors polymerase C E1 E2 NS1 NS2 NS3 NS4A NS4B NS5A NS5B Protease Inhibitors NS5A Inhibitors Polymerase Inhibitors « …previr » « ….asvir » « …..buvir » Telaprevir Daclatasvir Nucs Non-Nucs Boceprevir Ledipasvir Simeprevir Velpatasvir (GS-5816) Sofosbuvir Dasabuvir Paritaprevir Ombitasvir MK 3682 GS-9669 Glecaprevir Pibrentasvir ACH-3422 MK-8876 Grazoprevir Elbasvir ALS-335 Voxilaprevir MK-8408 Sovaprevir Samatasvir ACH-2684 Odalasvir (ACH-3102) Asselah et al. -
A Randomized, Double-Blind, Multiple-Dose Study of the Pan-Genotypic NS5A Inhibitor Samatasvir in Patients Infected with Hepatitis C Virus Genotype 1, 2, 3 Or 4
Accepted Manuscript A randomized, double-blind, multiple-dose study of the pan-genotypic NS5A inhibitor samatasvir in patients infected with hepatitis C virus genotype 1, 2, 3 or 4 Bradley Vince, John M. Hill, Eric J. Lawitz, William O’Riordan, Lynn R. Webster, Daniel M. Gruener, Ricky S. Mofsen, Abel Murillo, Eileen Donovan, Jie Chen, Joseph F. McCarville, John Z. Sullivan-Bólyai, Douglas Mayers, Xiao-Jian Zhou PII: S0168-8278(14)00014-2 DOI: http://dx.doi.org/10.1016/j.jhep.2014.01.003 Reference: JHEPAT 4997 To appear in: Journal of Hepatology Received Date: 8 October 2013 Revised Date: 29 December 2013 Accepted Date: 6 January 2014 Please cite this article as: Vince, B., Hill, J.M., Lawitz, E.J., O’Riordan, W., Webster, L.R., Gruener, D.M., Mofsen, R.S., Murillo, A., Donovan, E., Chen, J., McCarville, J.F., Sullivan-Bólyai, J.Z., Mayers, D., Zhou, X-J., A randomized, double-blind, multiple-dose study of the pan-genotypic NS5A inhibitor samatasvir in patients infected with hepatitis C virus genotype 1, 2, 3 or 4, Journal of Hepatology (2014), doi: http://dx.doi.org/10.1016/j.jhep. 2014.01.003 This is a PDF file of an unedited manuscript that has been accepted for publication. As a service to our customers we are providing this early version of the manuscript. The manuscript will undergo copyediting, typesetting, and review of the resulting proof before it is published in its final form. Please note that during the production process errors may be discovered which could affect the content, and all legal disclaimers that apply to the journal pertain.