System for Classification of Structurally Related Carbohydrates 1
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MM# Modeling of Aldopentose Pyranose Rings Michael K
Chemical and Biological Engineering Publications Chemical and Biological Engineering 2002 MM# Modeling of Aldopentose Pyranose Rings Michael K. Dowd United States Department of Agriculture William M. Rockey Iowa State University Alfred D. French United States Department of Agriculture See next page for additional authors Follow this and additional works at: http://lib.dr.iastate.edu/cbe_pubs Part of the Biochemical and Biomolecular Engineering Commons, and the Biological Engineering Commons The ompc lete bibliographic information for this item can be found at http://lib.dr.iastate.edu/ cbe_pubs/31. For information on how to cite this item, please visit http://lib.dr.iastate.edu/ howtocite.html. This Article is brought to you for free and open access by the Chemical and Biological Engineering at Iowa State University Digital Repository. It has been accepted for inclusion in Chemical and Biological Engineering Publications by an authorized administrator of Iowa State University Digital Repository. For more information, please contact [email protected]. MM# Modeling of Aldopentose Pyranose Rings Abstract MM3 (version 1992, ϵ=3.0) was used to study the ring conformations of d-xylopyranose, d-lyxopyranose and d-arabinopyranose. The nee rgy surfaces exhibit low-energy regions corresponding to chair and skew forms with high-energy barriers between these regions corresponding to envelope and half-chair forms. The lowest 4 energy conformer is C 1 for α- and β-xylopyranose and α- and β-lyxopyranose, and the lowest energy 1 conformer is C 4 for α- and β-arabinopyranose. Only α-lyxopyranose exhibits a secondary low-energy region 1 ( C 4) within 1 kcal/mol of its global minimum. -
Hexose Oxidase from Chondrus Crispus Expressed in Hansenula Polymorpha
Chemical and Technical Assessment 63rdJECFA Hexose Oxidase from Chondrus Crispus expressed in Hansenula Polymorpha CHEMICAL AND TECHNICAL ASSESSMENT (CTA) Prepared by Jim Smith and Zofia Olempska-Beer © FAO 2004 1 Summary Hexose oxidase (HOX) is an enzyme that catalyses the oxidation of C6-sugars to their corresponding lactones. A hexose oxidase enzyme produced from a nonpathogenic and nontoxigenic genetically engineered strain of the yeast Hansenula polymorpha has been developed for use in several food applications. It is encoded by the hexose oxidase gene from the red alga Chondrus crispus that is not known to be pathogenic or toxigenic. C. crispus has a long history of use in food in Asia and is a source of carrageenan used in food as a stabilizer. As this alga is not feasible as a production organism for HOX, Danisco has inserted the HOX gene into the yeast Hansenula polymorpha. The information about this enzyme is provided in a dossier submitted to JECFA by Danisco, Inc. (Danisco, 2003). Based on the hexose oxidase cDNA from C. crispus, a synthetic gene was constructed that is more suitable for expression in yeast. The synthetic gene encodes hexose oxidase with the same amino acid sequence as that of the native C. crispus enzyme. The synthetic gene was combined with regulatory sequences, promoter and terminator derived from H. polymorpha, and inserted into the well-known plasmid pBR322. The URA3 gene from Saccharomyces cerevisiae (Baker’s yeast) and the HARS1 sequence from H. polymorpha were also inserted into the plasmid. The URA3 gene serves as a selectable marker to identify cells containing the transformation vector. -
Analysis of Intact Glycosidic Aroma Precursors in Grapes by High-Performance Liquid Chromatography with a Diode Array Detector
foods Article Analysis of Intact Glycosidic Aroma Precursors in Grapes by High-Performance Liquid Chromatography with a Diode Array Detector Cristina Cebrián-Tarancón 1 , José Oliva 2, Miguel Ángel Cámara 2, Gonzalo L. Alonso 1 and M. Rosario Salinas 1,* 1 Cátedra de Química Agrícola, E.T.S.I. Agrónomos y Montes, Departamento de Ciencia y Tecnología Agroforestal y Genética, Universidad de Castilla-La Mancha, Avda. de España s/n, 02071 Albacete, Spain; [email protected] (C.C.-T.); [email protected] (G.L.A.) 2 Departamento de Química Agrícola, Geología y Edafología, Facultad de Química, Universidad de Murcia, Campus de Espinardo s/n, 30100 Murcia, Spain; [email protected] (J.O.); [email protected] (M.Á.C.) * Correspondence: [email protected]; Tel.: +34-967-599210; Fax: +34-967-599238 Abstract: Nowadays, the techniques for the analysis of glycosidic precursors in grapes involve changes in the glycoside structure or it is necessary the use of very expensive analytical techniques. In this study, we describe for the first time an approach to analyse intact glycosidic aroma precursors in grapes by high-performance liquid chromatography with a diode array detector (HPLC-DAD), a simple and cheap analytical technique that could be used in wineries. Briefly, the skin of Muscat of Alexandria grapes was extracted using a microwave and purified using solid-phase extraction combining Oasis MCX and LiChrolut EN cartridges. In total, 20 compounds were selected by HPLC-DAD at 195 nm and taking as a reference the spectrum of phenyl β-D-glucopyranoside, whose DAD spectrum showed a first shoulder from 190 to 230 nm and a second around 200–360 nm. -
Low Fructose Diet
Low Fructose Diet What is Fructose? Fructose is a naturally occurring simple sugar found in fruit, vegetables, and honey. Fructose intolerance can occur in people with irritable bowel syndrome and other GI disorders. Fruits and fruit juices with higher levels of fructose may cause gas, bloating, abdominal cramping, and diarrhea. Glucose is also a naturally occurring sugar. The more glucose than fructose in a product, the more “intestinal friendly” the fruit or fruit juice may be. High Fructose Corn Syrup (HFCS) **** HFCS is made up of almost half glucose and half fructose and may be absorbed just as well as sucrose (regular table sugar). Therefore, items with HFCS such as soft drinks, may be tolerated well when limited to 12 oz per day and with a meal. HFCS can also be found in canned, baked, or processed foods. **** In some patients, even a small amount of processed fruit juice or even foods with HFCS may cause as much malabsorption, and/or intestinal discomfort, as eating large quantities of fruit. Sorbitol Sorbitol or Sorbose is a sugar alcohol used as an artificial sweetener and found naturally in fruits and fruit juices. It can also be found in many “diet foods” such as diet soft drinks, sugarless gum, sugar-free jelly/jam, and liquid medications. Sorbitol often creates similar symptoms as fructose – especially when fructose and sorbitol are ingested together. General Guidelines • Eliminate products with ingredients that list fructose, crystalline fructose (not HFCS), honey, and sorbitol on the label. • Avoid sugar alcohols which include sorbitol, isomalt, lactitol, maltitol, mannitol, xylitol, erythrytol, and lactatol. -
Carbohydrates: Structure and Function
CARBOHYDRATES: STRUCTURE AND FUNCTION Color index: . Very important . Extra Information. “ STOP SAYING I WISH, START SAYING I WILL” 435 Biochemistry Team *هذا العمل ﻻ يغني عن المصدر المذاكرة الرئيسي • The structure of carbohydrates of physiological significance. • The main role of carbohydrates in providing and storing of energy. • The structure and function of glycosaminoglycans. OBJECTIVES: 435 Biochemistry Team extra information that might help you 1-synovial fluid: - It is a viscous, non-Newtonian fluid found in the cavities of synovial joints. - the principal role of synovial fluid is to reduce friction between the articular cartilage of synovial joints during movement O 2- aldehyde = terminal carbonyl group (RCHO) R H 3- ketone = carbonyl group within (inside) the compound (RCOR’) 435 Biochemistry Team the most abundant organic molecules in nature (CH2O)n Carbohydrates Formula *hydrate of carbon* Function 1-provides important part of energy Diseases caused by disorders of in diet . 2-Acts as the storage form of energy carbohydrate metabolism in the body 3-structural component of cell membrane. 1-Diabetesmellitus. 2-Galactosemia. 3-Glycogen storage disease. 4-Lactoseintolerance. 435 Biochemistry Team Classification of carbohydrates monosaccharides disaccharides oligosaccharides polysaccharides simple sugar Two monosaccharides 3-10 sugar units units more than 10 sugar units Joining of 2 monosaccharides No. of carbon atoms Type of carbonyl by O-glycosidic bond: they contain group they contain - Maltose (α-1, 4)= glucose + glucose -Sucrose (α-1,2)= glucose + fructose - Lactose (β-1,4)= glucose+ galactose Homopolysaccharides Heteropolysaccharides Ketone or aldehyde Homo= same type of sugars Hetero= different types Ketose aldose of sugars branched unBranched -Example: - Contains: - Contains: Examples: aldehyde group glycosaminoglycans ketone group. -
Evidence for Two Asymmetric Conformational States in the Human Erythrocyte Sugar-Transport System by JOHN E
Biochem. J. (1975) 145, 417429 417 Printed in Great Britain Evidence for Two Asymmetric Conformational States in the Human Erythrocyte Sugar-Transport System By JOHN E. G. BARNETT, GEOFFREY D. HOLMAN, R. ALAN CHALKLEY and KENNETH A. MUNDAY Department ofPhysiology and Biochlemistry, University ofSouthampton, Southampton S09 3TU, U.K. (Received 4 June 1974) 6-0-Methyl-, 6-0-propyl-, 6-0-pentyl- and 6-0-benzyl-D-galactose, and 6-0-methyl-, 6-0-propyl- and 6-0-pentyl-D-glucose inhibit the glucose-transport system of the human erythrocyte when added to the external medium. Penetration of 6-0-methyl-D-galactose is inhibited by D-glucose, suggesting that it is transported by the glucose-transport system, but the longer-chain 6-0-alkyl-D-galactoses penetrate by a slower D-glucose- insensitive route at rates proportional to their olive oil/water partition coefficients. 6-0-n-Propyl-D-glucose and 6-0-n-propyl-D-galactose do not significantly inhibit L-sorbose entry or D-glucose exit when present only on the inside of the cells whereas propyl-f6-D-glucopyranoside, which also penetrates the membrane slowly by a glucose- insensitive route, only inhibits L-sorbose entry or D-glucose exit when present inside the cells, and not when on the outside. The 6-0-alkyl-D-galactoses, like the other non- transported C4 and C-6 derivatives, maltose and 4,6-0-ethylidene-D-glucose, protect against fluorodinitrobenzene inactivation, whereas propyl ,B-D-glucopyranoside stimulates the inactivation. Of the transported sugars tested, those modified at C-1, C-2 and C-3 enhance fluorodinitrobenzene inactivation, where those modified at C-4 and C-6 do not, but are inert or protect against inactivation. -
Structural Features
1 Structural features As defined by the International Union of Pure and Applied Chemistry gly- cans are structures of multiple monosaccharides linked through glycosidic bonds. The terms sugar and saccharide are synonyms, depending on your preference for Arabic (“sukkar”) or Greek (“sakkēaron”). Saccharide is the root for monosaccha- rides (a single carbohydrate unit), oligosaccharides (3 to 20 units) and polysac- charides (large polymers of more than 20 units). Carbohydrates follow the basic formula (CH2O)N>2. Glycolaldehyde (CH2O)2 would be the simplest member of the family if molecules of two C-atoms were not excluded from the biochemical repertoire. Glycolaldehyde has been found in space in cosmic dust surrounding star-forming regions of the Milky Way galaxy. Glycolaldehyde is a precursor of several organic molecules. For example, reaction of glycolaldehyde with propenal, another interstellar molecule, yields ribose, a carbohydrate that is also the backbone of nucleic acids. Figure 1 – The Rho Ophiuchi star-forming region is shown in infrared light as captured by NASA’s Wide-field Infrared Explorer. Glycolaldehyde was identified in the gas surrounding the star-forming region IRAS 16293-2422, which is is the red object in the centre of the marked square. This star-forming region is 26’000 light-years away from Earth. Glycolaldehyde can react with propenal to form ribose. Image source: www.eso.org/public/images/eso1234a/ Beginning the count at three carbon atoms, glyceraldehyde and dihydroxy- acetone share the common chemical formula (CH2O)3 and represent the smallest carbohydrates. As their names imply, glyceraldehyde has an aldehyde group (at C1) and dihydoxyacetone a carbonyl group (at C2). -
406-3 Wood Sugars.Pdf
Wood Chemistry Wood Chemistry Wood Carbohydrates l Major Components Wood Chemistry » Hexoses – D-Glucose, D-Galactose, D-Mannose PSE 406/Chem E 470 » Pentoses – D-Xylose, L-Arabinose Lecture 3 » Uronic Acids Wood Sugars – D-glucuronic Acid, D Galacturonic Acid l Minor Components » 2 Deoxy Sugars – L-Rhamnose, L-Fucose PSE 406 - Lecture 3 1 PSE 406 - Lecture 3 2 Wood Chemistry Wood Sugars: L Arabinose Wood Chemistry Wood Sugars: D Xylose l Pentose (5 carbons) CHO l Pentose CHO l Of the big 5 wood sugars, l Xylose is the major constituent of H OH arabinose is the only one xylans (a class of hemicelluloses). H OH found in the L form. » 3-8% of softwoods HO H HO H l Arabinose is a minor wood » 15-25% of hardwoods sugar (0.5-1.5% of wood). HO H H OH CH OH 2 CH2OH PSE 406 - Lecture 3 3 PSE 406 - Lecture 3 4 1 1 Wood Chemistry Wood Sugars: D Mannose Wood Chemistry Wood Sugars: D Glucose CHO l Hexose (6 carbons) CHO l Hexose (6 carbons) l Glucose is the by far the most H OH l Mannose is the major HO H constituent of Mannans (a abundant wood monosaccharide (cellulose). A small amount can HO H class of hemicelluloses). HO H also be found in the » 7-13% of softwoods hemicelluloses (glucomannans) H OH » 1-4% of hardwoods H OH H OH H OH CH2OH CH2OH PSE 406 - Lecture 3 5 PSE 406 - Lecture 3 6 Wood Chemistry Wood Sugars: D Galactose Wood Chemistry Wood Sugars CHO CHO l Hexose (6 carbons) CHO H OH H OH l Galactose is a minor wood D Xylose L Arabinose HO H HO H monosaccharide found in H OH HO H H OH certain hemicelluloses CH2OH HO H CHO CH2OH CHO CHO » 1-6% of softwoods HO H H OH H OH » 1-1.5% of hardwoods HO H HO H HO H HO H HO H H OH H OH H OH H OH H OH H OH CH2OH CH2OH CH2OH CH2OH D Mannose D Glucose D Galactose PSE 406 - Lecture 3 7 PSE 406 - Lecture 3 8 2 2 Wood Chemistry Sugar Numbering System Wood Chemistry Uronic Acids CHO 1 CHO l Aldoses are numbered l Uronic acids are with the structure drawn HO H 2 polyhydroxy carboxylic H OH vertically starting from the aldehydes. -
The Food Lawyers® Respectfully Request That FDA Implements the Following
December 7, 2020 Dockets Management Staff (HFA-305) Filed Electronically Food and Drug Administration https://www.regulations.gov Re: Sugars Metabolized Differently than Traditional Sugars (FDA-2020-N-1359) Ladies and Gentlemen: One Page Executive Summary FDA’s seeks information to “… promote the public health and help consumers make informed dietary decisions” regarding sugars that are metabolized differently than traditional sugars. Given the nation’s battles with diabetes and obesity, and the benefits that non-traditional sugars can offer in these battles, the Agency’s stated public policy goal goes to the very heart of American consumers’ health. This laudatory public policy’s realization is complicated by a lack of consumer awareness of how some sugars are metabolized differently than others. In an effort to answer the questions posed by the Agency regarding the treatment of Sugars that Are Metabolized Differently Than Traditional Sugars, we suggest that the Agency adapt a mechanism that will seek to harmonize the public policy of promoting public health with consumers’ lack of awareness of sugars that are metabolized differently than sucrose. In particular, we suggest that FDA should consider the following: 1. Establish a new category of sugars called Rare Sugars that exhibit the following characteristics: a. Are naturally occurring b. Impart a sweet taste that is at least 50% the sweetness of sucrose c. 2.0 kcal/g or less. d. Resulting pH of 6.0 or greater of dental plaque after consumption. e. No or low glycemic response. f. No or low insulinemic response. 2. Exclude Rare Sugars from “Total Sugars” and “Added Sugars” declarations to stimulate their deployment by industry and consumption by the public. -