In-Vitro Antioxidant Potential of Alseodaphne Semecarpifolia Leaf Extract
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Evolutionary Comparisons of the Chloroplast Genome in Lauraceae and Insights Into Loss Events in the Magnoliids
GBE Evolutionary Comparisons of the Chloroplast Genome in Lauraceae and Insights into Loss Events in the Magnoliids Yu Song1,2,†,Wen-BinYu1,2,†, Yunhong Tan1,2,†, Bing Liu3,XinYao1,JianjunJin4, Michael Padmanaba1, Jun-Bo Yang4,*, and Richard T. Corlett1,2,* 1Center for Integrative Conservation, Xishuangbanna Tropical Botanical Garden, Chinese Academy of Sciences, Mengla, China 2Southeast Asia Biodiversity Research Institute, Chinese Academy of Sciences, Yezin, Nay Pyi Taw, Myanmar 3State Key Laboratory of Systematic and Evolutionary Botany, Institute of Botany, Chinese Academy of Sciences, Beijing, China 4Germplasm Bank of Wild Species, Kunming Institute of Botany, Chinese Academy of Sciences, Kunming, China *Corresponding authors: E-mails: [email protected]; [email protected]. †These authors contributed equally to this work. Accepted: September 1, 2017 Data deposition: This project has been deposited at GenBank of NCBI under the accession number MF939337 to MF939351. Abstract Available plastomes of the Lauraceae show similar structure and varied size, but there has been no systematic comparison across the family. In order to understand the variation in plastome size and structure in the Lauraceae and related families of magnoliids, we here compare 47 plastomes, 15 newly sequenced, from 27 representative genera. We reveal that the two shortest plastomes are in the parasitic Lauraceae genus Cassytha, with lengths of 114,623 (C. filiformis) and 114,963 bp (C. capillaris), and that they have lost NADH dehydrogenase (ndh) genes in the large single-copy region and one entire copy of the inverted repeat (IR) region. The plastomes of the core Lauraceae group, with lengths from 150,749 bp (Nectandra angustifolia) to 152,739 bp (Actinodaphne trichocarpa), have lost trnI-CAU, rpl23, rpl2,afragmentofycf2, and their intergenic regions in IRb region, whereas the plastomes of the basal Lauraceae group, with lengths from 157,577 bp (Eusideroxylon zwageri) to 158,530 bp (Beilschmiedia tungfangen- sis), have lost rpl2 in IRa region. -
Arborescent Angiosperms of Mundanthurai Range in The
Check List 8(5): 951–962, 2012 © 2012 Check List and Authors Chec List ISSN 1809-127X (available at www.checklist.org.br) Journal of species lists and distribution Arborescent Angiosperms of Mundanthurai Range in PECIES S the Kalakad-Mundanthurai Tiger Reserve (KMTR) of the OF southern Western Ghats, India ISTS L Paulraj Selva Singh Richard 1* and Selvaraj Abraham Muthukumar 2 1 Madras Christian College, Department of Botany, Chennai – 600 059, Tamil Nadu, India. 2 St. John’s College, Department of Botany, Tirunelveli, 627 002, Tamil Nadu, India. [email protected] * Corresponding author. E-mail: Abstract: The present study was carried out to document the diversity of arborescent angiosperm taxa of Mundanthurai representingRange in the 175Kalakad-Mundanthurai genera in 65 families Tiger were Reserve recorded. (KMTR) The most of the speciose southern families Western are Euphorbiaceae Ghats in India. (27 During spp.), the Rubiaceae floristic survey carried out from January 2008 to December 2010, a total of 247 species and intraspecific taxa of trees and shrubs to this region which includes Agasthiyamalaia pauciflora, Elaeocarpus venustus, Garcinia travancorica, Gluta travancorica, (17Goniothalamus spp.), Myrtaceae rhynchantherus, (14 spp.), Lauraceae Homalium (13 travancoricum, spp.) and Annonaceae Homaium (11 jainii, spp.). OropheaOf the 247 uniflora, taxa, 27 Phlogacanthus species are endemic albiflorus, only Polyalthia shendurunii, Symplocos macrocarpa and Symplocos sessilis . This clearly signifies that this range is relevant to the conservation of the local flora. Introduction India for conserving global biological diversity and also The Western Ghats is one of the biodiversity hotspots declared as Regional Centre of Endemism in the Indian of the world (Myers et al. -
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REINWARDTIA A JOURNAL ON TAXONOMIC BOTANY, PLANT SOCIOLOGY AND ECOLOGY Vol. 14(1): 1-248, December 23, 2014 Chief Editor Kartini Kramadibrata (Mycologist, Herbarium Bogoriense, Indonesia) Editors Dedy Darnaedi (Taxonomist, Herbarium Bogoriense, Indonesia) Tukirin Partomihardjo (Ecologist, Herbarium Bogoriense, Indonesia) Joeni Setijo Rahajoe (Ecologist, Herbarium Bogoriense, Indonesia) Marlina Ardiyani (Taxonomist, Herbarium Bogoriense, Indonesia) Topik Hidayat (Taxonomist, Indonesia University of Education, Indonesia) Eizi Suzuki (Ecologist, Kagoshima University, Japan) Jun Wen (Taxonomist, Smithsonian Natural History Museum, USA) Managing Editor Himmah Rustiami (Taxonomist, Herbarium Bogoriense, Indonesia) Lulut Dwi Sulistyaningsih (Taxonomist, Herbarium Bogoriense, Indonesia) Secretary Endang Tri Utami Layout Editor Deden Sumirat Hidayat Medi Sutiyatno Illustrators Subari Wahyudi Santoso Anne Kusumawaty Correspondence on editorial matters and subscriptions for Reinwardtia should be addressed to: HERBARIUM BOGORIENSE, BOTANY DIVISION, RESEARCH CENTER FOR BIOLOGY- INDONESIAN INSTITUTE OF SCIENCES CIBINONG SCIENCE CENTER, JLN. RAYA JAKARTA - BOGOR KM 46, CIBINONG 16911, P.O. Box 25 Cibinong INDONESIA PHONE (+62) 21 8765066; Fax (+62) 21 8765062 E-MAIL: [email protected] 1 1 Cover images: 1. Begonia holosericeoides (female flower and habit) (Begoniaceae; Ardi et al.); 2. Abaxial cuticles of Alseodaphne rhododendropsis (Lauraceae; Nishida & van der Werff); 3. Dipo- 2 3 3 4 dium puspitae, Dipodium purpureum (Orchidaceae; O'Byrne); 4. Agalmyla exannulata, Cyrtandra 4 4 coccinea var. celebica, Codonoboea kjellbergii (Gesneriaceae; Kartonegoro & Potter). The Editors would like to thanks all reviewers of volume 14(1): Abdulrokhman Kartonegoro - Herbarium Bogoriense, Bogor, Indonesia Altafhusain B. Nadaf - University of Pune, Pune, India Amy Y. Rossman - Systematic Mycology & Microbiology Laboratory USDA-ARS, Beltsville, USA Andre Schuiteman - Royal Botanic Gardens, Kew, UK Ary P. -
Plastome Phylogenomics, Systematics, and Divergence Time Estimation of the Beilschmiedia Group (Lauraceae) T ⁎ ⁎ Haiwen Lia,C, Bing Liua, Charles C
Molecular Phylogenetics and Evolution 151 (2020) 106901 Contents lists available at ScienceDirect Molecular Phylogenetics and Evolution journal homepage: www.elsevier.com/locate/ympev Plastome phylogenomics, systematics, and divergence time estimation of the Beilschmiedia group (Lauraceae) T ⁎ ⁎ Haiwen Lia,c, Bing Liua, Charles C. Davisb, , Yong Yanga, a State Key Laboratory of Systematic and Evolutionary Botany, Institute of Botany, the Chinese Academy of Sciences, Beijing 100093, China b Department of Organismic and Evolutionary Biology, Harvard University Herbaria, 22 Divinity Avenue, Cambridge, MA 02138, USA c University of the Chinese Academy of Sciences, Beijing, China ARTICLE INFO ABSTRACT Keywords: Intergeneric relationships of the Beilschmiedia group (Lauraceae) remain unresolved, hindering our under- Beilschmiedia group standing of their classification and evolutionary diversification. To remedy this, we sequenced and assembled Lauraceae complete plastid genomes (plastomes) from 25 species representing five genera spanning most major clades of Molecular clock Beilschmiedia and close relatives. Our inferred phylogeny is robust and includes two major clades. The first Plastome includes a monophyletic Endiandra nested within a paraphyletic Australasian Beilschmiedia group. The second Phylogenomics includes (i) a subclade of African Beilschmiedia plus Malagasy Potameia, (ii) a subclade of Asian species including Systematics Syndiclis and Sinopora, (iii) the lone Neotropical species B. immersinervis, (iv) a subclade of core Asian Beilschmiedia, sister to the Neotropical species B. brenesii, and v) two Asian species including B. turbinata and B. glauca. The rampant non-monophyly of Beilschmiedia we identify necessitates a major taxonomic realignment of the genus, including but not limited to the mergers of Brassiodendron and Sinopora into the genera Endiandra and Syndiclis, respectively. -
Problem in the Generic Delimitation Between Alseodaphne, Dehaasia and Nothaphoebe (Lauraceae) in Borneo
Blumea 54, 2009: 192–197 www.ingentaconnect.com/content/nhn/blumea RESEARCH ARTICLE doi:10.3767/000651909X476148 Problem in the generic delimitation between Alseodaphne, Dehaasia and Nothaphoebe (Lauraceae) in Borneo S. Julia1, E. Soepadmo2, W. Yahud1 Key words Abstract Alseodaphne, Dehaasia and Nothaphoebe are, morphologically, three closely related genera belong- ing to the Persea subgroup of the Lauraceae. A total of 214 binomials of the three genera have been published Alseodaphne by various authors (International Plant Names Index, March 2007), of which 44 have been attributed to species Dehaasia occurring in Borneo. In revising the Lauraceae for the Tree Flora of Sabah and Sarawak Project, we recognize 40 generic delimitation distinct species (i.e., Alseodaphne 11; Dehaasia 16; and Nothaphoebe 13) for Sabah and Sarawak. These include Nothaphoebe 34 previously known and 6 undescribed species. Despite many attempts by various authors (Rohwer 1993, 2000, Sabah and Sarawak Van der Werff & Richter 1996, Van der Werff 2001) to clarify the generic delimitation between these three genera, to date there remains to be no satisfactory solution. In the absence of a well-accepted generic delimitation and classification within the Lauraceae as a whole, and for the purpose of preparing revision of the Lauraceae for the Tree Flora of Sabah and Sarawak, we have opted for recognising Alseodaphne, Dehaasia and Nothaphoebe as distinct genera. The distinguishing morphological characters of these three genera, based on specimens from Borneo (Sabah and Sarawak, in particular) are presented. Published on 30 October 2009 INTRODUCTION Gamble (1912), Ridley (1924) and Kostermans (1973a) recog- nised Alseodaphne and Persea as two distinct genera. -
Inflorescence Structure in Laurales—Stable and Flexible Patterns
Zurich Open Repository and Archive University of Zurich Main Library Strickhofstrasse 39 CH-8057 Zurich www.zora.uzh.ch Year: 2020 Inflorescence structure in Laurales - stable and flexible patterns Endress, Peter K ; Lorence, David H Abstract: Premise of research. This is the first comparative study of inflorescence morphology through all seven families of the order Laurales (Atherospermataceae, Calycanthaceae, Gomortegaceae, Hernandi- aceae, Lauraceae, Monimiaceae, and Siparunaceae) and the larger subclades of these families. Methodol- ogy. We studied 89 species of 39 genera from herbarium specimens and partly from liquid-fixed material, focusing on the branching patterns in the reproductive region. In addition, we used the information from the literature. Pivotal results. There are recurrent branching patterns. Botryoids, thyrsoids, and compound botryoids and thyrsoids are the most common forms. Panicles, racemes, and thyrses are rare. Panicles and racemes occur in some highly nested Lauraceae and thyrses in Hernandiaceae. Thus, the presence of thyrso-paniculate inflorescences is not characteristic for Laurales, in contrast to the statement by Weberling. Conclusions. An evolutionary interpretation is still difficult because the existing molecular phylogenetic analyses are not fine grained enough and also because the previous phylogenetic results are not robust enough to make firm conclusions within the order. However, the present structural results show that there are trends of occurrence of certain patterns in families or subclades within families, and these may be useful in a morphological matrix of magnoliids (see work by Doyle and Endress for basal angiosperms). DOI: https://doi.org/10.1086/706449 Posted at the Zurich Open Repository and Archive, University of Zurich ZORA URL: https://doi.org/10.5167/uzh-181311 Journal Article Published Version Originally published at: Endress, Peter K; Lorence, David H (2020). -
A New Genus of Lauraceae Based on Molecular and Morphological Evidence
RESEARCH ARTICLE Alseodaphnopsis: A new genus of Lauraceae based on molecular and morphological evidence Yue-qing Mo1,2☯, Lang Li1☯, Jian-wu Li3☯, Jens G. Rohwer4, Hsi-wen Li5, Jie Li1* 1 Plant Phylogenetics & Conservation Group, Center for Integrative Conservation, Xishuangbanna Tropical Botanical Garden, Chinese Academy of Sciences, Kunming, P. R. China, 2 University of Chinese Academy of Sciences, Beijing, P. R. China, 3 Herbarium (HITBC), Xishuangbanna Tropical Botanical Garden, Chinese Academy of Sciences, Menglun, Yunnan, P. R. China, 4 Biozentrum Klein Flottbek, UniversitaÈt Hamburg, Hamburg, Germany, 5 Herbarium (KUN), Kunming Institute of Botany, Chinese Academy of Sciences, a1111111111 Kunming, Yunnan, P. R. China a1111111111 ☯ These authors contributed equally to this work. a1111111111 * [email protected] a1111111111 a1111111111 Abstract An investigation of a questionable species of the genus Alseodaphne led to the discovery of OPEN ACCESS a new genus Alseodaphnopsis H. W. Li & J. Li, gen. nov., separated from Alseodaphne Citation: Mo Y-q, Li L, Li J-w, Rohwer JG, Li H-w, Nees, and a new species Alseodaphnopsis ximengensis H. W. Li & J. Li, sp. nov., endemic Li J (2017) Alseodaphnopsis: A new genus of to Yunnan province, China. This new species is characterized by having big, axillary, panic- Lauraceae based on molecular and morphological ulate inflorescences, as well as large, subglobose fruits. Based on DNA sequence data from evidence. PLoS ONE 12(10): e0186545. https://doi. two gene regions (nuclear ribosomal ITS and LEAFY intron II), we investigate its phyloge- org/10.1371/journal.pone.0186545 netic position within the Persea group. Phylogenies using maximum parsimony (MP) and Editor: Zhong-Jian Liu, The National Orchid Bayesian inference (BI) support the recognition of Alseodaphnopsis as a distinct genus but Conservation Center of China; The Orchid Conservation & Research Center of Shenzhen, do not resolve well its relationship within the Persea group. -
<I>Dehaasia</I> (<I>Lauraceae</I>) in Sumatra
Blumea 65, 2020: 167–175 www.ingentaconnect.com/content/nhn/blumea RESEARCH ARTICLE https://doi.org/10.3767/blumea.2020.65.02.08 Taxonomic revision of Dehaasia (Lauraceae) in Sumatra I.A. Fijridiyanto1,2,*, E. Smets2,3,4, D. Arifiani5 Key words Abstract A revision of Dehaasia (Lauraceae) in Sumatra is presented. Eight species are recognized, including two newly described species (D. bandaharense and D. pilosa). A key to the eight species, descriptions and distribu- Dehaasia tion maps of each species and illustrations of newly described species are provided. A neotype for D. incrassata Lauraceae is designated. revision Sumatra taxonomy Citation: Fijridiyanto IA, Smets E, Arifiani D. 2020. Taxonomic revision of Dehaasia (Lauraceae) in Sumatra. Blumea 65 (2): 167–175. https://doi.org/10.3767/ blumea.2020.65.02.08. Effectively published online: 28 October 2020. INTRODUCTION Nothaphoebe are morphologically closely similar (Julia et al. 2009). Dehaasia differs from Alseodaphne only by 2-thecate vs Dehaasia Blume belongs to the Lauraceae and consists of 4-thecate anthers, respectively (Rohwer 1993, Van der Werff approximately 35 species distributed from South China to 2001). Recently, molecular studies (Rohwer et al. 2009, Li et al. New Guinea, with a centre of diversity in Malesia (Rohwer 2011) showed that the species of the genus Dehaasia are scat- 1993). Haasia Blume (Nees 1836) was published earlier than tered throughout the Alseodaphne-Dehaasia clade. The genus Dehaasia and comprised six species: Haasia cuneata Blume, Nothaphoebe is also nested in this clade. These molecular data H. elongata Blume, H. incrassata (Jack) Nees, H. media Blume, supported Dehaasia, Alseodaphne and Nothaphoebe as closely H. -
Research Progress in Plant Molecular Systematics of Lauraceae
biology Review Research Progress in Plant Molecular Systematics of Lauraceae Yongjing Tian 1 , Jingbo Zhou 1 , Yunyan Zhang 1, Shuang Wang 1 , Ying Wang 1 , Hong Liu 2,3,* and Zhongsheng Wang 1,* 1 School of Life Sciences, Nanjing University, Nanjing 210023, China; [email protected] (Y.T.); [email protected] (J.Z.); [email protected] (Y.Z.); [email protected] (S.W.); [email protected] (Y.W.) 2 Center for Tropical Plant Conservation, Fairchild Tropical Botanic Garden, Coral Gables, Miami, FL 33156, USA 3 Department of Earth and Environment, Florida International University, Miami, FL 33199, USA * Correspondence: hliu@fiu.edu (H.L.); [email protected] (Z.W.) Simple Summary: Lauraceae, as an angiosperm group with high ecological and economic value, has been widely studied. With the development of science and technology, the research of Lauraceae has changed from morphology to molecular systematics. Our paper reviewed the molecular phylogeny of Lauraceae in recent years. From the aspects of gene fragments, chloroplast genome and DNA barcodes, we mainly discussed the establishment of Cinnamomeae in the ‘Core Lauraceae’ and the tribal controversial genera (Actinodaphne, Sassafras, Caryodaphnopsis, Neocinnamomum and Cassytha). We think that the whole genome and inflorescence characteristics are the breakthrough to solve the tribal problem of Lauraceae. Using reliable molecular and morphological evidence to reconstruct the phylogenetic relationship of Lauraceae will provide an important theoretical basis for the rational utilization of Lauraceae resources, the development of potential resources and the protection of rare plants. Citation: Tian, Y.; Zhou, J.; Zhang, Y.; Abstract: Lauraceae is a large family of woody plants with high ecological and economic value. -
Evaluation of the Relationship of Aiouea with Cinnamomum, Ocotea and Mocinnodaphne (Lauraceae) Using Epidermal Leaf Characters
University of Missouri, St. Louis IRL @ UMSL Theses UMSL Graduate Works 7-15-2010 Evaluation of the relationship of Aiouea with Cinnamomum, Ocotea and Mocinnodaphne (Lauraceae) using epidermal leaf characters Juan Carlos Penagos Zuluaga University of Missouri-St. Louis, [email protected] Follow this and additional works at: https://irl.umsl.edu/thesis Recommended Citation Penagos Zuluaga, Juan Carlos, "Evaluation of the relationship of Aiouea with Cinnamomum, Ocotea and Mocinnodaphne (Lauraceae) using epidermal leaf characters" (2010). Theses. 22. https://irl.umsl.edu/thesis/22 This Thesis is brought to you for free and open access by the UMSL Graduate Works at IRL @ UMSL. It has been accepted for inclusion in Theses by an authorized administrator of IRL @ UMSL. For more information, please contact [email protected]. Evaluation of the relationship of Aiouea with Cinnamomum, Ocotea and Mocinnodaphne (Lauraceae) using epidermal leaf characters Juan Carlos Penagos Zuluaga A Thesis Submitted to The Graduate School at the University of Missouri – St. Louis in a partial fulfillment of the requirements for the degree of Master of Science in Biology August 2010 Advisory committee Dr. Peter F. Stevens Chairperson Dr. Henk van der Werff Dr. Richard C. Keating University of Missouri Department of Biology Contents List of tables ……………………………………………………………………………iii List of figures……………………………………………………………………………iv List of appendices……………………………………………………………………….v Abstract………………………………………………………………………………….vi Acknowledgements…………………………………………………………………….vii Introduction -
BOTANICAL ILLUSTRATION WORKSHOP 1-2 September 2013
CONTENT CONTENT WELCOME MESSAGE ............................................................................................... 1 ORGANIZING COMMITTEE ...................................................................................... 2 GENERAL INFORMATION ....................................................................................... 5 CONFERENCE PROGRAM OVERVIEW ............................................................ 12 KEYNOTE LECTURE ................................................................................................. 16 ORAL PRESENTATION DAY 1: SESSION 1 – 2 ........................................................................................ 19 DAY 2: SESSION 3 – 6 ........................................................................................ 54 DAY 4: SESSION 7 – 9 ........................................................................................ 126 DAY 5: SESSION 10 – 12 .................................................................................... 178 POSTER PRESENTATION ......................................................................................... 217 MISCELLANEOUS ....................................................................................................... 295 LIST OF PARTICIPANTS .......................................................................................... 304 AUTHOR INDEX ........................................................................................................ 329 9th International Flora Malesiana Symposium i WELCOME MESSAGE -
Incidence of Extra-Floral Nectaries and Their Effect on the Growth and Survival of Lowland Tropical Rain Forest Trees
View metadata, citation and similar papers at core.ac.uk brought to you by CORE provided by KnowledgeBank at OSU Incidence of Extra-Floral Nectaries and their Effect on the Growth and Survival of Lowland Tropical Rain Forest Trees Honors Research Thesis Presented in Partial Fulfillment of the Requirements for graduation “with Honors Research Distinction in Evolution and Ecology” in the undergraduate colleges of The Ohio State University by Andrew Muehleisen The Ohio State University May 2013 Project Advisor: Dr. Simon Queenborough, Department of Evolution, Ecology and Organismal Biology Incidence of Extra-Floral Nectaries and their Effect on the Growth and Survival of Lowland Tropical Rain Forest Trees Andrew Muehleisen Evolution, Ecology & Organismal Biology, The Ohio State University, OH 43210, USA Summary Mutualistic relationships between organisms have long captivated biologists, and extra-floral nectaries (EFNs), or nectar-producing glands, found on many plants are a good example. The nectar produced from these glands serves as food for ants which attack intruders that may threaten their free meal, preventing herbivory. However, relatively little is known about their impact on the long-term growth and survival of plants. To better understand the ecological significance of EFNs, I examined their incidence on lowland tropical rain forest trees in Yasuni National Park in Amazonian Ecuador. Of those 896 species that were observed in the field, EFNs were found on 96 species (11.2%), widely distributed between different angiosperm families. This rate of incidence is high but consistent with other locations in tropical regions. Furthermore, this study adds 13 new genera and 2 new families (Urticaceae and Caricaceae) to the list of taxa exhibiting EFNs.