Australian Lungfish Neurohypophysial Hormone Genes Encode

Total Page:16

File Type:pdf, Size:1020Kb

Australian Lungfish Neurohypophysial Hormone Genes Encode Proc. Natl. Acad. Sci. USA Vol. 94, pp. 13339–13344, November 1997 Physiology Australian lungfish neurohypophysial hormone genes encode vasotocin and [Phe2]mesotocin precursors homologous to tetrapod-type precursors (molecular cloningyprecursor organizationymolecular evolutionyphylogenetic tree) SUSUMU HYODO*†,SUSUMU ISHII‡, AND JEAN M. P. JOSS§ *Department of Biology, Graduate School of Arts and Sciences, University of Tokyo, Komaba, Meguro-ku, Tokyo 153, Japan; ‡Department of Biology, School of Education, Waseda University, Nishi-waseda, Shinjuku-ku, Tokyo 169-50, Japan; and §School of Biological Sciences, Macquarie University, New South Wales 2109, Australia Communicated by Howard A. Bern, University of California, Berkeley, CA, September 15, 1997 (received for review August 8, 1997) ABSTRACT In view of the well-established role of neu- which are much larger than the nonapeptides, gives more rohypophysial hormones in osmoregulation of terrestrial ver- precise and reliable information for estimating the molecular tebrates, lungfishes are a key group for study of the molecular evolutionary relationships than does analysis based on substi- and functional evolution of the hypothalamo-neurohypophy- tutions only in the nine amino acid residues. Using statistical sial system. Here we report on the primary structure of the comparison of gene structures and the predicted amino acid precursors encoding vasotocin (VT) and [Phe2]mesotocin sequences of precursors, Urano and colleagues (3–5) have ([Phe2]MT) of the Australian lungfish, Neoceratodus forsteri. proposed that teleost neurohypophysial hormone genes have Genomic sequence analysis and Northern blot analysis con- their own evolutionary history separate from that of the 2 firmed that [Phe ]MT is a native oxytocin family peptide in tetrapod genes. Their hypothesis is further supported by the the Australian lungfish, although it has been reported that the structural characteristics of neurohypophysial hormone pre- lungfish neurohypophysis contains MT. The VT precursor cursors, including composition and the presence or absence of consists of a signal peptide, VT, that is connected to a posttranslational modification sites (2–5). neurophysin by a Gly-Lys-Arg sequence, and a copeptin Lungfishes are the closest surviving freshwater relatives of moiety that includes a Leu-rich core segment and a glycosyl- 2 the Devonian fish group from which early amphibians are ation site. In contrast, the [Phe ]MT precursor does not assumed to have evolved. Acher and his colleagues (6, 7) contain a copeptin moiety. These structural features of the reported that lungfishes have mesotocin (MT), the non- lungfish precursors are consistent with those in tetrapods, but mammalian tetrapod type hormone, as their OT family hor- different from those in teleosts where both VT and isotocin mone, whereas all teleosts examined have isotocin (IT). They precursors contain a copeptin-like moiety without a glycosyl- have proposed an evolutionary lineage of IT (teleosts)-MT ation site at the carboxyl terminals of their neurophysins. (non-mammalian tetrapods)-OT (mammals) and suggest a Comparison of the exonyintron organization also supports close relationship between lungfishes and amphibians. How- homology of the lungfish [Phe2]MT gene with tetrapod oxy- ever, the data on amino acid substitutions in nonapeptides are tocinyMT genes, rather than with teleost isotocin genes. Moreover, molecular phylogenetic analysis shows that neuro- insufficient to estimate the molecular phylogeny of the whole hypophysial hormone genes of the lungfish are closely related neurohypophysial hormone genes. For their VP family pep- to those of the toad. The present results along with previous tide, lungfishes have vasotocin (VT), which is common to all morphological findings indicate that the hypothalamo- non-mammalian vertebrate species. These previous reports led neurohypophysial system of the lungfish has evolved along the us to study lungfish neurohypophysial hormone precursors and tetrapod lineage, whereas the teleosts form a separate lineage, their genes to further clarify the molecular evolution of both within the class Osteichthyes. neurohypophysial hormone genes. As material, we used the Australian lungfish, Neoceratodus forsteri, which is considered to be more closely related to other Neurohypophysial hormones are nonapeptides regulating var- ious physiological events related especially to water and salt freshwater fish than other lungfish species because of the metabolism and reproduction. Twelve distinct nonapeptide well-developed gills on all gill arches. We isolated cDNAs principles have been chemically characterized in a wide variety encoding the neurohypophysial hormone precursors of this of vertebrates, and are classified into two groups: the vaso- species. We report here characteristics of the nucleotide and pressin (VP) and the oxytocin (OT) families. They are believed deduced amino acid sequences of the isolated cDNAs and the to have developed from a common ancestral molecule by gene structural organization of the precursors. These characteris- duplication (1). All vertebrate species, except for the cyclo- tics, together with the molecular phylogenetic analysis, clearly stomes, contain at least one VP family peptide and one OT show that neurohypophysial hormone genes of the Australian family peptide. Several schemes have been proposed as path- lungfish have evolved along the tetrapod lineage, whereas the ways of hormonal molecular evolution based on amino acid teleosts appear to form a separate lineage within the class sequences of nonapeptides and their phyletic distribution (1). Osteichthyes. Furthermore, we present evidence for a peptide, Complementary DNA and genomic analyses have shown [Phe2]MT, as a native neurohypophysial hormone in addition that neurohypophysial nonapeptides are synthesized as large to VT in the Australian lungfish. precursor molecules (2). Analysis of the precursor molecules, Abbreviations: IT, isotocin; MT, mesotocin; OT, oxytocin; VP, vaso- The publication costs of this article were defrayed in part by page charge pressin; VT, vasotocin. Data deposition: The sequences reported in this paper have been payment. This article must therefore be hereby marked ‘‘advertisement’’ in deposited in the GenBank database {accession nos. AB001977 (VT accordance with 18 U.S.C. §1734 solely to indicate this fact. cDNA) and AB001978 ([Phe2]mesotocin cDNA)}. © 1997 by The National Academy of Sciences 0027-8424y97y9413339-6$2.00y0 †To whom reprint requests should be addressed. e-mail: cshyodo@ PNAS is available online at http:yywww.pnas.org. komaba.ecc.u-tokyo.ac.jp. 13339 Downloaded by guest on September 24, 2021 13340 Physiology: Hyodo et al. Proc. Natl. Acad. Sci. USA 94 (1997) MATERIALS AND METHODS which included nucleotide sequences for VT and MT. The cDNAs also included nucleotide sequences for Gly-Lys-Arg Adult lungfish were collected from a tributary of the Mary sequence and the conserved portion of neurophysin, support- River in southeastern Queensland in December 1993. Total ing the notion that the cDNAs encode portions of lungfish RNA was extracted from two hypothalami, weighing 340 and 1 neurohypophysial hormone precursors. By screening the li- 323 mg, with Isogen (Nippon Gene, Tokyo); poly(A) RNA brary with these partial VT and MT cDNAs, 4 VT- and 7 was then prepared by using Oligotex-dT30 (Japan Synthetic MT-positive clones were obtained. One of four VT-positive Rubber, Tokyo). A cDNA library was constructed by using the clones contained a VT-specific sequence. Five of seven MT- cDNA Synthesis System Plus and cDNA Cloning System lgt10 positive clones encoded a MT-like sequence in which the (Amersham). second amino acid residue from the amino terminal was Phe, Complementary DNAs encoding portions of VT and MT- not Tyr. The remaining two MT-positive clones contained no like precursors were amplified by a PCR technique from a sequence encoding neurohypophysial hormone. The MT- mixture of phage DNA prepared from the amplified cDNA positive clones thus encoded a new peptide [Phe2]MT as the library; their sequences were determined and were then used mature OT family hormone instead of MT. Northern blot as screening probes to obtain full-length cDNAs. For PCR analysis revealed one band of 950 bases for the VT probe and amplification, the following three primers were synthesized: one band of 800 bases for the [Phe2]MT probe (data not forward and reverse primers that are complementary to re- shown). gions close to EcoRI ends of the left and right arms of lgt10, VT Precursor. respectively, and a degenerate VTyMT primer that consists of VT precursor is composed of four segments: oligonucleotides predicted from the amino acid sequence of a signal peptide, VT, a neurophysin and a copeptin (Figs. 1–3). VT and MT (residues 1–7). The amplification was performed VT is connected to its neurophysin by the Gly-Lys-Arg se- with the VTyMT primer and either the forward or the reverse quence which serves as a signal for proteolytic processing and primer in the presence of Ampli Taq DNA polymerase (Perkin– carboxyl-terminal amidation (Fig. 1). All Cys residues in the Elmer) using a Program Temp Control System, PC-700 (Astec, neurophysin, which are considered to be important for its Fukuoka). After electrophoresis, major bands were excised conformation, are completely conserved (Fig. 2). Lungfish and ligated into pBluescript II SK1 vector (Stratagene). The copeptin includes a Leu-rich core segment and a glycosylation
Recommended publications
  • RESPIRATORY CONTROL in the LUNGFISH, NEOCERATODUS FORSTERI (KREFT) KJELL JOHANSEN, CLAUDE LENFANT and GORDON C
    Comp. Biochem. Physiol., 1967, Vol. 20, pp. 835-854 RESPIRATORY CONTROL IN THE LUNGFISH, NEOCERATODUS FORSTERI (KREFT) KJELL JOHANSEN, CLAUDE LENFANT and GORDON C. GRIGG Abstract-1. Respiratory control has been studied in the lungfish, Neoceratodus forsteri by measuring ventilation (Ve), oxygen uptake (VO2), per cent O2 extraction from water, breathing rates of branchial and aerial respiration and changes in blood gas and pulmonary gas composition during exposure to hypoxia and hypercarbia. 2. Hypoxic water represents a strong stimulus for compensatory increase in both branchial and aerial respiration. Water ventilation increases by a factor of 3 or 4 primarily as a result of increased depth of breathing. 3. The ventilation perfusion ratio decreased during hypoxia because of a marked increase in cardiac output. Hypoxia also increased the fraction of total blood flow perfusing the lung. Injection of nitrogen into the lung evoked no compensatory changes. 4. It is concluded that the chemoreceptors eliciting the compensatory changes are located on the external side facing the ambient water or in the efferent branchial blood vessels. 5. Elevated pCO2 in the ambient water depressed the branchial respiration but stimulated aerial respiration. 6. It is suggested that the primary regulatory effect of the response to increased ambient pCO2 is to prevent CO2 from entering the animal, while the secondary stimulation of air breathing is caused by hypoxic stimulation of chemoreceptors located in the efferent branchial vessels. INTRODUCTION I t i s generally accepted that vertebrates acquired functional lungs before they possessed a locomotor apparatus for invasion of a terrestrial environment. Shortage of oxygen in the environment is thought to have been the primary driving force behind the development of auxiliary air breathing.
    [Show full text]
  • Sight for Sore Eyes: Ancient Fish See Colour 19 September 2005
    Sight for sore eyes: ancient fish see colour 19 September 2005 The Australian lungfish - one of the world’s oldest pigments, are bigger in lungfish than for any other fishes and related to our ancient ancestors - may animal with a backbone. This probably makes them have been viewing rivers in technicolour long more sensitive to light. before dinosaurs roamed the Earth. “We keep discovering ways in which these animals Recent work by postgraduate student Helena are quite different from other fish,” Helena says. Bailes at the University of Queensland Australia, “Their eyes seem designed to optimise both has found these unusual fish have genes for five sensitivity and colour vision with large cells different forms of visual pigment in their eyes. containing different visual pigments.” Humans only have three. She now is hoping that behavioural research can Helena is one of 13 early-career researchers who find out how these fish are using their eyes for have presented their work to the public and the colour vision in the wild. media for the first time as part of the national program Fresh Science. “We may then learn what Queensland rivers look like to some of their oldest inhabitants, before those Night and day (colour) vision are controlled by inhabitants are wiped out,” Bailes says. different light sensing cells known respectively as rods and cones. Humans have a single type of rod and three types of cone, each containing a different pigment gene tuned to red, green and blue wavelengths. Lungfish possess two additional pigments that were lost in mammals, Bailes says.
    [Show full text]
  • BMC Ecology Biomed Central
    BMC Ecology BioMed Central Research article Open Access Visual ecology of the Australian lungfish (Neoceratodus forsteri) Nathan S Hart*1, Helena J Bailes1,2, Misha Vorobyev1,3, N Justin Marshall1 and Shaun P Collin1 Address: 1School of Biomedical Sciences, The University of Queensland, Brisbane, QLD 4072, Australia, 2Faculty of Life Sciences, The University of Manchester, Oxford Road, Manchester, M13 9PL, UK and 3Department of Optometry and Vision Science, The University of Auckland, Private Bag 92019, Auckland, New Zealand Email: Nathan S Hart* - [email protected]; Helena J Bailes - [email protected]; Misha Vorobyev - [email protected]; N Justin Marshall - [email protected]; Shaun P Collin - [email protected] * Corresponding author Published: 18 December 2008 Received: 27 August 2008 Accepted: 18 December 2008 BMC Ecology 2008, 8:21 doi:10.1186/1472-6785-8-21 This article is available from: http://www.biomedcentral.com/1472-6785/8/21 © 2008 Hart et al; licensee BioMed Central Ltd. This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/2.0), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited. Abstract Background: The transition from water to land was a key event in the evolution of vertebrates that occurred over a period of 15–20 million years towards the end of the Devonian. Tetrapods, including all land-living vertebrates, are thought to have evolved from lobe-finned (sarcopterygian) fish that developed adaptations for an amphibious existence.
    [Show full text]
  • Tetrapod Limb and Sarcopterygian Fin Regeneration Share a Core Genetic
    ARTICLE Received 28 Apr 2016 | Accepted 27 Sep 2016 | Published 2 Nov 2016 DOI: 10.1038/ncomms13364 OPEN Tetrapod limb and sarcopterygian fin regeneration share a core genetic programme Acacio F. Nogueira1,*, Carinne M. Costa1,*, Jamily Lorena1, Rodrigo N. Moreira1, Gabriela N. Frota-Lima1, Carolina Furtado2, Mark Robinson3, Chris T. Amemiya3,4, Sylvain Darnet1 & Igor Schneider1 Salamanders are the only living tetrapods capable of fully regenerating limbs. The discovery of salamander lineage-specific genes (LSGs) expressed during limb regeneration suggests that this capacity is a salamander novelty. Conversely, recent paleontological evidence supports a deeper evolutionary origin, before the occurrence of salamanders in the fossil record. Here we show that lungfishes, the sister group of tetrapods, regenerate their fins through morphological steps equivalent to those seen in salamanders. Lungfish de novo transcriptome assembly and differential gene expression analysis reveal notable parallels between lungfish and salamander appendage regeneration, including strong downregulation of muscle proteins and upregulation of oncogenes, developmental genes and lungfish LSGs. MARCKS-like protein (MLP), recently discovered as a regeneration-initiating molecule in salamander, is likewise upregulated during early stages of lungfish fin regeneration. Taken together, our results lend strong support for the hypothesis that tetrapods inherited a bona fide limb regeneration programme concomitant with the fin-to-limb transition. 1 Instituto de Cieˆncias Biolo´gicas, Universidade Federal do Para´, Rua Augusto Correa, 01, Bele´m66075-110,Brazil.2 Unidade Genoˆmica, Programa de Gene´tica, Instituto Nacional do Caˆncer, Rio de Janeiro 20230-240, Brazil. 3 Benaroya Research Institute at Virginia Mason, 1201 Ninth Avenue, Seattle, Washington 98101, USA. 4 Department of Biology, University of Washington 106 Kincaid, Seattle, Washington 98195, USA.
    [Show full text]
  • Bichir External Gills Arise Via Heterochronic Shift That Accelerates
    RESEARCH ARTICLE Bichir external gills arise via heterochronic shift that accelerates hyoid arch development Jan Stundl1,2, Anna Pospisilova1, David Jandzik1,3, Peter Fabian1†, Barbora Dobiasova1‡, Martin Minarik1§, Brian D Metscher4, Vladimir Soukup1*, Robert Cerny1* 1Department of Zoology, Faculty of Science, Charles University in Prague, Prague, Czech Republic; 2National Museum, Prague, Czech Republic; 3Department of Zoology, Faculty of Natural Sciences, Comenius University in Bratislava, Bratislava, Slovakia; 4Department of Theoretical Biology, University of Vienna, Vienna, Austria *For correspondence: Abstract In most vertebrates, pharyngeal arches form in a stereotypic anterior-to-posterior [email protected] progression. To gain insight into the mechanisms underlying evolutionary changes in pharyngeal (VS); arch development, here we investigate embryos and larvae of bichirs. Bichirs represent the earliest [email protected] (RC) diverged living group of ray-finned fishes, and possess intriguing traits otherwise typical for lobe- Present address: †Eli and Edythe finned fishes such as ventral paired lungs and larval external gills. In bichir embryos, we find that Broad CIRM Center for the anteroposterior way of formation of cranial segments is modified by the unique acceleration of Regenerative Medicine and Stem the entire hyoid arch segment, with earlier and orchestrated development of the endodermal, Cell Research, University of mesodermal, and neural crest tissues. This major heterochronic shift in the anteroposterior Southern California, Los Angeles, developmental sequence enables early appearance of the external gills that represent key ‡ United States; The Prague breathing organs of bichir free-living embryos and early larvae. Bichirs thus stay as unique models Zoological Garden, Prague, for understanding developmental mechanisms facilitating increased breathing capacity.
    [Show full text]
  • Prospects and Potential of the African Lungfish (Protopterus Spp): an Alternative Source of Fishing and Fish Farming Livelihoods in Uganda and Kenya
    FINAL REPORTS: INVESTIGATIONS 2009–2011 Prospects and Potential of the African Lungfish (Protopterus spp): An Alternative Source of Fishing and Fish Farming Livelihoods in Uganda and Kenya Indigenous Species Development/Study/09IND07AU John Walakira and Gertrude Atukunda National Fisheries Resources Research Institute Jinja, Uganda Joseph J. Molnar Auburn University Auburn, Alabama, USA ABSTRACT Culture of species resilient to drought and stressed water quality conditions may be a significant part of the future of African aquaculture. Air breathing fishes potentially have a role in low-management culture systems for small farms because dissolved oxygen does not threaten the fish crop. The African lungfish (Protopterus spp) is advantageous because it is: an indigenous fish with good quality flesh, an air- breather, and a biocontrol agent against schistosome vector snails. African lungfish wild stocks in Uganda are falling, while no clear, sustainable strategies have been formulated to replenish the diminishing natural populations. Little is known about indigenous practices of culture, harvest, and marketing of Protopterus spp from farm ponds and water bodies. Lungfish is highly valued as a food item in eastern of Uganda, and now is becoming more broadly accepted in the central region. Certain health or nutraceutical benefits are also attributed to the species. Most lungfish is consumed fresh but smoked products are also marketed. The fish is increasingly found alongside tilapia and Nile perch in some rural and urban markets. Nonetheless, there also seems to be some countervailing sociocultural beliefs that continue deter consumers from eating lungfish. This study assesses the status and potential of lungfish aquaculture in Uganda in seven districts in Kampala, Wakiso, Kumi, Busia, Soroti, Pallisa and Jinja.
    [Show full text]
  • The Salmon, the Lungfish (Or the Coelacanth) and the Cow: a Revival?
    Zootaxa 3750 (3): 265–276 ISSN 1175-5326 (print edition) www.mapress.com/zootaxa/ Editorial ZOOTAXA Copyright © 2013 Magnolia Press ISSN 1175-5334 (online edition) http://dx.doi.org/10.11646/zootaxa.3750.3.6 http://zoobank.org/urn:lsid:zoobank.org:pub:0B8E53D4-9832-4672-9180-CE979AEBDA76 The salmon, the lungfish (or the coelacanth) and the cow: a revival? FLÁVIO A. BOCKMANN1,3, MARCELO R. DE CARVALHO2 & MURILO DE CARVALHO2 1Dept. Biologia, Faculdade de Filosofia, Ciências e Letras de Ribeirão Preto, Universidade de São Paulo. Av. dos Bandeirantes 3900, 14040-901 Ribeirão Preto, SP. Brazil. E-mail: [email protected] 2Dept. Zoologia, Instituto de Biociências, Universidade de São Paulo. R. Matão 14, Travessa 14, no. 101, 05508-900 São Paulo, SP. Brazil. E-mails: [email protected] (MRC); [email protected] (MC) 3Programa de Pós-Graduação em Biologia Comparada, FFCLRP, Universidade de São Paul. Av. dos Bandeirantes 3900, 14040-901 Ribeirão Preto, SP. Brazil. In the late 1970s, intense and sometimes acrimonious discussions between the recently established phylogeneticists/cladists and the proponents of the long-standing ‘gradistic’ school of systematics transcended specialized periodicals to reach a significantly wider audience through the journal Nature (Halstead, 1978, 1981; Gardiner et al., 1979; Halstead et al., 1979). As is well known, cladistis ‘won’ the debate by showing convincingly that mere similarity or ‘adaptive levels’ were not decisive measures to establish kinship. The essay ‘The salmon, the lungfish and the cow: a reply’ by Gardiner et al. (1979) epitomized that debate, deliberating to a wider audience the foundations of the cladistic paradigm, advocating that shared derived characters (homologies) support a sister- group relationship between the lungfish and cow exclusive of the salmon (see also Rosen et al., 1981; Forey et al., 1991).
    [Show full text]
  • Fish Diversity
    Fish Diversity Department of Biology, Faculty of Mathematics and Natural Sciences, Universitas Indonesia Outline • Ancestry and relationships of major groups of fishes. • Living jawless fishes. • Chondrichtyes fishes. • Osteichthyes fishes. An Overview of Fish • Fish can be roughly defined (and there are a few exceptions) as cold- blooded creatures that have backbones, live in water, and have gills. • The gills enable fish to “breathe” underwater, without drawing oxygen from the atmosphere. • No other vertebrate but the fish is able to live without breathing air. One family of fish, the lungfish, is able to breathe air when mature and actually loses its functional gills. Another family of fish, the tuna, is considered warm-blooded by many people, but the tuna is an exception. Types of Scales Fins and Locomotion • Fish are propelled through the water by fins, body movement, or both. • A fish can swim even if its fins are removed, though it generally has difficulty with direction and balance. • Many kinds of fish jump regularly. Those that take to the air when hooked give anglers the greatest thrills. The jump is made to dislodge a hook or to escape a predator in close pursuit, or the fish may try to shake its body free of plaguing parasites. Types of Caudal Fins Fishes propel themselves through water in two very different ways, 1. The median and paired fins (MPF) 2. The body and/or caudal fins (BCF) Nutrition and The Digestive System • Many fish are strictly herbivores, eating only plant life. Many are purely plankton eaters. Most are carnivorous (in the sense of eating the flesh of other fish, as well as crustaceans, mollusks, and insects) or at least piscivorous (eating fish).
    [Show full text]
  • West African Lungfish a Living Fossil’S Biological and Behavioral Adaptations
    VideoMedia Spotlight West African Lungfish A living fossil’s biological and behavioral adaptations For the complete video with media resources, visit: http://education.nationalgeographic.org/media/west-african-lungfish/ Funder West African lungfish are prehistoric animals. They have survived unchanged for so long (nearly 400 million years) that they are sometimes nicknamed “living fossils.” West African lungfish have remarkable adaptations that have helped them survive: a primitive lung and the ability to survive in a state of estivation, which is similar to hibernation. A lungfish’s lung is a biological adaptation. A biological adaptation is a physical change in an organism that develops over time. Like all fish, lungfish have organs known as gills to extract oxygen from water. The biological adaptation of the lung allows lungfish to also extract oxygen from the air. A lungfish’s estivation also involves a number of biological adaptations, including the excretion of a mucus “cocoon” and digestion of the fish’s own muscle tissue to obtain nutrients. A lungfish’s estivation also includes a behavioral adaptation. A behavioral adaptation describes a way an organism acts. Prior to estivation, lungfish furiously burrow into the muddy ground. The behavioral adaptation of burrowing allows lungfish to create a protected habitat where they can survive during a long period of dormancy. Watch this video, from the Nat Geo WILD series “Destination Wild,” and use our glossary to help answer questions in the Questions tab. Learn more about these fascinating fish with our Fast Facts. Questions How has the West African lungfish’s primitive lung helped the species survive for more than 300 million years? 1 of 5 During the dry season, the West African lungfish can breathe (extract oxygen from the air) as lakes and ponds turn to mud and cracked earth.
    [Show full text]
  • Chordates 1 Echinodermata
    2/24/13 Chordates Chordates 1 Echinodermata ANCESTRAL Cephalochordata Chordates • Origin of Chordates DEUTEROSTOME Urochordata Notochord • Tunicates etc Craniates Common Myxini ancestor of • Sharks etc chordates Petromyzontida Vertebrates Head Chondrichthyes Gnathostomes • Bony “fish” Vertebral column Actinopterygii Osteichthyans – Osteichthans Jaws, mineralized skeleton Actinistia Lobe-fins – Lobe fins and lungfish Lungs or lung derivatives Dipnoi Lobed fins Amphibia Tetrapods Amniotes Limbs with digits Reptilia Amniotic egg Mammalia Milk All Chordates have a notochord and a Feb 25, 2013 dorsal, hollow nerve cord Figure 34.2a Derived features of Chordates Echinodermata 2. Dorsal, Muscle hollow ANCESTRAL Cephalochordata segments nerve cord DEUTEROSTOME Urochordata 1.Notochord Notochord Common Myxini ancestor of chordates Petromyzontida Head Chondrichthyes Mouth Vertebral column Anus 3. Pharyngeal Jaws, mineralized skeleton 4. Muscular, slits or clefts Osteichthyes Bony fish & post-anal tail tetrapods Figure 34.4 Cephalochordata- Lancets Cirri Urochordata Myxini Mouth Petromyzontida Pharyngeal slits Atrium Chondrichthyes Digestive tract Actinopterygii Notochord Actinistia Atriopore Dorsal, 1 cm Segmental hollow Dipnoi muscles nerve cord Amphibia Anus Reptilia Tail Mammalia 1 2/24/13 Figure 34.5 Cephalochordata Urochordata Tunicates Incurrent Water flow Notochord siphon Myxini to mouth Dorsal, hollow Excurrent Petromyzontida nerve cord siphon Tail Excurrent Chondrichthyes siphon Excurrent siphon Atrium Incurrent Muscle Actinopterygii siphon
    [Show full text]
  • On the Histology of the Skin of the Lungfish Protopterus Annectens After Experi- Mentally Induced Aestivation
    On the Histology of the Skin of the Lungfish Protopterus annectens after experi- mentally induced Aestivation. By G. M. Smith and C. W. Coatcs, Department of Anatomy, Yale University School of Medicine and New York Aquarium. With 4 Text-figures. DUBING the past year observations have been made on the histological structure of the skin of two lungfishes (Proto- pterus annectens Owen) kept for a period of almost six months under conditions of aestivation induced experimentally at the New York Aquarium. Both lungfishes had been caught in the fresh-water marshes near Beira, East Africa, and shipped directly to New York. They were adult fishes and measured approximately 14 inches in length. On July 8, 1935, each fish was placed in a separate battery jar containing a mixture of clay, loam, grass roots, and swamp plants, with enough water added to permit the fish to swim. After a few days of accommodation, the surface water was drained off slowly, so that at the end of three weeks the fish was compelled to live in soft mud at the bottom of the jar. No more water was added, with the result that the muddy contents of the jar began to dry. In the course of this drying of the mud, the lungfish made a burrow, forcing its body up to the free surface to breathe at about the rate of once an hour. Soon afterwards the surface of the mud became so hard as to prevent the extrusion of the nose for breathing. It was noticed that the fish then formed at the surface of the mud a small hole about a quarter of an inch in diameter.
    [Show full text]
  • 43 Genes Support the Lungfish-Coelacanth Grouping
    Shan and Gras BMC Research Notes 2011, 4:49 http://www.biomedcentral.com/1756-0500/4/49 SHORTREPORT Open Access 43 genes support the lungfish-coelacanth grouping related to the closest living relative of tetrapods with the Bayesian method under the coalescence model Yunfeng Shan1*, Robin Gras1,2 Abstract Background: Since the discovery of the “living fossil” in 1938, the coelacanth (Latimeria chalumnae) has generally been considered to be the closest living relative of the land vertebrates, and this is still the prevailing opinion in most general biology textbooks. However, the origin of tetrapods has not been resolved for decades. Three principal hypotheses (lungfish-tetrapod, coelacanth-tetrapod, or lungfish-coelacanth sister group) have been proposed. Findings: We used the Bayesian method under the coalescence model with the latest published program (Bayesian Estimation of Species Trees, or BEST) to perform a phylogenetic analysis for seven relevant taxa and 43 nuclear protein-coding genes with the jackknife method for taxon sub-sampling. The lungfish-coelacanth sister group was consistently reconstructed with the Bayesian method under the coalescence model in 17 out of 21 taxon sets with a Bayesian posterior probability as high as 99%. Lungfish-tetrapod was only inferred from BCLS and BACLS. Neither coelacanth-tetrapod nor lungfish-coelacanth-tetrapod was recovered out of all 21 taxon sets. Conclusions: Our results provide strong evidence in favor of accepting the hypothesis that lungfishes and coelacanths form a monophyletic sister-group that is the closest living relative of tetrapods. This clade was supported by high Bayesian posterior probabilities of the branch (a lungfish-coelacanth clade) and high taxon jackknife supports.
    [Show full text]