A SNARE Complex Containing Syntaxin 3 Is Present in Ribbon Synapses of the Retina
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Antibodies to Snare Complex Proteins
ANTIBODIES TO SNARE COMPLEX PROTEINS Antibodies to SNARE Complex Proteins Synaptophysin VAMP/Synaptobrevin SNAP-25 Syntaxin CDCrel-1 Synaptotagmin-1 Munc18-1 Synapsin-1 INTERNATIONAL VERSION www.cedarlanelabs.com/SNARE CEDARLANE® is an ISO 9001 and ISO 13485 registered company Antibodies to SNARE Complex Proteins SNARE proteins are a large protein superfamily consisting of more than 60 members in yeast and mammals. The primary role of these proteins is to mediate fusion of vesicles with their target membrane-bound compartments (such as lysosomes). The most well studied SNARE proteins are those involved in mediating synaptic vesicle docking at the pre-synaptic membrane of neurons. During this process, syntaxin-1, SNAP-25 and munc18-1 associate and form a complex at the pre-synaptic membrane. This complex interacts with synaptobrevin-2 and synaptotagmin-1 located in synaptic vesicles and initiates docking, priming and fusion at the membrane. This fusion event leads to release of the vesicle's cargo into the synaptic cleft, where it can ultimately interact with the post-synaptic neuron. Antibodies to: Synaptophysin Synaptophysin is a 38 KDa synaptic vesicle (SV) glycoprotein containing four transmembrane domains. It is present in SVs of the neuroendocrine system, brain, spinal cord, retina, adrenal medulla and at neuromuscular junctions. Synaptophysin acts as a marker for neuroendocrine tumours and has been used to study the distribution of synapses within the brain due to its ubiquity at these regions. Although the exact function of synaptophysin is still unknown, several lines of evidence suggest it may have many important roles in SV exo and endocytosis. These include regulation of SNARE assembly, fusion pore formation initiating neurotransmitter release, and activation of SV endocytosis. -
Differential Requirement of NPHP1 for Compartmentalized Protein Localization During
bioRxiv preprint doi: https://doi.org/10.1101/2021.01.20.427412; this version posted January 20, 2021. The copyright holder for this preprint (which was not certified by peer review) is the author/funder, who has granted bioRxiv a license to display the preprint in perpetuity. It is made available under aCC-BY 4.0 International license. 1 Differential requirement of NPHP1 for compartmentalized protein localization during 2 photoreceptor outer segment development and maintenance 3 4 Poppy Dattaa,b,#, J. Thomas Cribbsa,b,#, and Seongjin Seoa,b,* 5 6 aDepartment of Ophthalmology and Visual Sciences, The University of Iowa Carver College of Medicine, Iowa 7 City, IA 52242, U.S.A. 8 bInstitute for Vision Research, The University of Iowa, Iowa City, IA 52242, U.S.A. 9 10 11 #Equally contributed 12 *To whom correspondence should be addressed: 13 Seongjin Seo, PhD 14 Department of Ophthalmology and Visual Sciences 15 University of Iowa College of Medicine 16 375 Newton Rd 17 3181D MERF 18 Iowa City, IA 52242, U.S.A. 19 Phone: 1-319-353-4477 20 Email: [email protected] 21 22 Running title: Roles of NPHP1 in photoreceptors 23 Keywords: cilia; ciliary gate; compartmentalization; inherited retinal degeneration; nonsense-associated altered 24 splicing; protein confinement; transition zone 1 bioRxiv preprint doi: https://doi.org/10.1101/2021.01.20.427412; this version posted January 20, 2021. The copyright holder for this preprint (which was not certified by peer review) is the author/funder, who has granted bioRxiv a license to display the preprint in perpetuity. -
Defining the Kv2.1–Syntaxin Molecular Interaction Identifies a First-In-Class Small Molecule Neuroprotectant
Defining the Kv2.1–syntaxin molecular interaction identifies a first-in-class small molecule neuroprotectant Chung-Yang Yeha,b,1, Zhaofeng Yec,d,1, Aubin Moutale, Shivani Gaura,b, Amanda M. Hentonf,g, Stylianos Kouvarosf,g, Jami L. Salomana, Karen A. Hartnett-Scotta,b, Thanos Tzounopoulosa,f,g, Rajesh Khannae, Elias Aizenmana,b,g,2, and Carlos J. Camachoc,2 aDepartment of Neurobiology, University of Pittsburgh School of Medicine, Pittsburgh, PA 15261; bPittsburgh Institute for Neurodegenerative Diseases, University of Pittsburgh School of Medicine, Pittsburgh, PA 15261; cDepartment of Computational and Systems Biology, University of Pittsburgh School of Medicine, Pittsburgh, PA 15261; dSchool of Medicine, Tsinghua University, Beijing 100871, China; eDepartment of Pharmacology, College of Medicine, University of Arizona, Tucson, AZ 85724; fDepartment of Otolaryngology, University of Pittsburgh School of Medicine, Pittsburgh, PA 15261; and gPittsburgh Hearing Research Center, University of Pittsburgh School of Medicine, Pittsburgh, PA 15261 Edited by Lily Yeh Jan, University of California, San Francisco, CA, and approved June 19, 2019 (received for review February 27, 2019) + The neuronal cell death-promoting loss of cytoplasmic K follow- (13). The Kv2.1-dependent cell death pathway is normally initiated ing injury is mediated by an increase in Kv2.1 potassium channels in by the oxidative liberation of zinc from intracellular metal-binding the plasma membrane. This phenomenon relies on Kv2.1 binding to proteins (14), leading to the sequential phosphorylation of syntaxin 1A via 9 amino acids within the channel intrinsically disor- Kv2.1 residues Y124 and S800 by Src and p38 kinases, respectively dered C terminus. Preventing this interaction with a cell and blood- (15–17). -
Identification of Synaptic Proteins and Their Isoform Mrnas In
Proc. Natl. Acad. Sci. USA Vol. 91, pp. 12487-12491, December 1994 Cell Biology Identification of synaptic proteins and their isoform mRNAs in compartments of pancreatic endocrine cells (exocytosis/secretion/insulin/diabetes) GUNILLA JACOBSSON*, ANDREW J. BEANt, RICHARD H. SCHELLERt, LISA JUNTTI-BERGGRENt, JUDE T. DEENEYt, PER-OLOF BERGGRENt AND BJORN MEISTER*§ *Department of Neuroscience and tRolf Luft's Center for Diabetes Research, Department of Molecular Medicine, Karolinska Institute, S-171 77 Stockholm, Sweden; and tDepartment of Molecular and Cellular Physiology, Howard Hughes Medical Institute, Beckman Center, Stanford University, Stanford, CA 94305 Communicated by Tomas Hokfelt, August 30, 1994 ABSTRACT Several proteins that are of importance for clostridial neurotoxins, including tetanus toxin and botuli- membrane trafficking in the nerve terminal have recently been num neurotoxin B, whereas botulinum neurotoxins D and F characterized. We have used Western blot and immunohis- are capable of cleaving both forms of VAMP (10-12). tochemistry to show that synaptotagmin, synaptobrevin/VAMP VAMP-1 and VAMP-2 are encoded by two distinct genes (13) (vesicle-associated membrane protein), SNAP-25 (synaptosom- and are differentially expressed in the nervous system (14). al-associated protein of 25 kDa), and syntaxin proteins are Cellubrevin is a homologue of VAMP, which is present in a present in cells of the islets of Langerhans in the endocrine wide variety of tissues and may be a membrane trafficking pancreas. Synaptotagmin-like immunoreactivity (-LI) was lo- protein of a constitutively recycling pathway (15). calized to granules within the cytoplasm of a few endocrine cells In contrast to synaptotagmin and VAMP, the synaptoso- located in the periphery of the islets, identified as somatostatin- mal-associated protein of 25 kDa (SNAP-25) is located at the containing cells, and in many nerve fibers within the islets. -
Complexin Suppresses Spontaneous Exocytosis by Capturing the Membrane- Proximal Regions of VAMP2 and SNAP25
bioRxiv preprint doi: https://doi.org/10.1101/849885; this version posted November 21, 2019. The copyright holder for this preprint (which was not certified by peer review) is the author/funder. All rights reserved. No reuse allowed without permission. Complexin suppresses spontaneous exocytosis by capturing the membrane- proximal regions of VAMP2 and SNAP25 Authors: J. Malsam1,6, S. Bärfuss1,6, T. Trimbuch2, F. Zarebidaki2, A.F.-P. Sonnen3,5, K. Wild1, A. Scheutzow1, I. Sinning1, J.A.G. Briggs3,4, C. Rosenmund2, and T.H. Söllner1,7,* Author Affiliations: 1Heidelberg University Biochemistry Center, Im Neuenheimer Feld 328, 69120 Heidelberg, Germany. 2Neuroscience Research Center, Charité Universitätsmedizin Berlin, Chariteplatz 1, 10117 Berlin, Germany. 3European Molecular Biology Laboratory, Meyerhofstraße 1, 69117 Heidelberg, Germany. 4MRC Laboratory of Molecular Biology, Francis Crick Avenue, Cambridge Biomedical Campus, Cambridge CB2 0QH, UK. 5Present address: Department of Pathology, University Medical Centre Utrecht, Heidelberglaan 100, 3584 CX Utrecht, The Netherlands 6These authors contributed equally 7Lead Contact *Correspondence: [email protected]. Summary The neuronal protein complexin contains multiple domains that exert both clamping and facilitatory functions to tune spontaneous and action potential triggered synaptic release. We address the clamping mechanism and show that the accessory helix of complexin arrests the assembly of the soluble N-ethylmaleimide-sensitive factor attachment protein receptor -
Mechanisms of Synaptic Plasticity Mediated by Clathrin Adaptor-Protein Complexes 1 and 2 in Mice
Mechanisms of synaptic plasticity mediated by Clathrin Adaptor-protein complexes 1 and 2 in mice Dissertation for the award of the degree “Doctor rerum naturalium” at the Georg-August-University Göttingen within the doctoral program “Molecular Biology of Cells” of the Georg-August University School of Science (GAUSS) Submitted by Ratnakar Mishra Born in Birpur, Bihar, India Göttingen, Germany 2019 1 Members of the Thesis Committee Prof. Dr. Peter Schu Institute for Cellular Biochemistry, (Supervisor and first referee) University Medical Center Göttingen, Germany Dr. Hans Dieter Schmitt Neurobiology, Max Planck Institute (Second referee) for Biophysical Chemistry, Göttingen, Germany Prof. Dr. med. Thomas A. Bayer Division of Molecular Psychiatry, University Medical Center, Göttingen, Germany Additional Members of the Examination Board Prof. Dr. Silvio O. Rizzoli Department of Neuro-and Sensory Physiology, University Medical Center Göttingen, Germany Dr. Roland Dosch Institute of Developmental Biochemistry, University Medical Center Göttingen, Germany Prof. Dr. med. Martin Oppermann Institute of Cellular and Molecular Immunology, University Medical Center, Göttingen, Germany Date of oral examination: 14th may 2019 2 Table of Contents List of abbreviations ................................................................................. 5 Abstract ................................................................................................... 7 Chapter 1: Introduction ............................................................................ -
SNAP-24, a Novel Drosophila SNARE Protein 4057 Proteins Were Purified on Glutathione Beads and Cleaved from the GST Fig
Journal of Cell Science 113, 4055-4064 (2000) 4055 Printed in Great Britain © The Company of Biologists Limited 2000 JCS1894 SNAP-24, a Drosophila SNAP-25 homologue on granule membranes, is a putative mediator of secretion and granule-granule fusion in salivary glands Barbara A. Niemeyer*,‡ and Thomas L. Schwarz§ Department of Molecular and Cellular Physiology, Stanford Medical School, Stanford, CA 94305, USA *Present address: Department of Pharmacology and Toxicology, School of Medicine, University of Saarland, D-66421 Homburg, Germany ‡Author for correspondence (e-mail: [email protected]) §Present address: Harvard Medical School, Division of Neuroscience, The Children’s Hospital, 300 Longwood Avenue, Boston, MA 02115, USA Accepted 16 September; published on WWW 31 October 2000 SUMMARY Fusion of vesicles with target membranes is dependent is not concentrated in synaptic regions. In vitro studies, on the interaction of target (t) and vesicle (v) SNARE however, show that SNAP-24 can form core complexes with (soluble NSF (N-ethylmaleimide-sensitive fusion protein) syntaxin and both synaptic and non-synaptic v-SNAREs. attachment protein receptor) proteins located on opposing High levels of SNAP-24 are found in larval salivary glands, membranes. For fusion at the plasma membrane, the t- where SNAP-24 localizes mainly to granule membranes SNARE SNAP-25 is essential. In Drosophila, the only rather than the plasma membrane. During glue secretion, known SNAP-25 isoform is specific to neuronal axons and the massive exocytotic event of these glands, SNAP-24 synapses and additional t-SNAREs must exist that mediate containing granules fuse with one another and the apical both non-synaptic fusion in neurons and constitutive and membrane, suggesting that glue secretion utilizes regulated fusion in other cells. -
C-Terminal Domain of Mammalian Complexin-1 Localizes to Highly Curved Membranes
C-terminal domain of mammalian complexin-1 localizes to highly curved membranes Jihong Gonga,b,c,d,1, Ying Laie,1, Xiaohong Lia,b,c,d, Mengxian Wanga,b,c,d, Jeremy Leitze,f, Yachong Hug, Yunxiang Zhange,UcheorB.Choie, Daniel Ciprianoe,f, Richard A. Pfuetznere,f, Thomas C. Südhofe,f, Xiaofei Yanga,b,c,d,2, Axel T. Brungere,f,h,i,j,2, and Jiajie Diaoe,f,2,3 aKey Laboratory of Cognitive Science, College of Biomedical Engineering, South-Central University for Nationalities, Wuhan 430074, China; bHubei Key Laboratory of Medical Information Analysis and Tumor Diagnosis & Treatment, College of Biomedical Engineering, South-Central University for Nationalities, Wuhan 430074, China; cLaboratory of Membrane Ion Channels and Medicine, College of Biomedical Engineering, South-Central University for Nationalities, Wuhan 430074, China; dCollege of Life Science, South-Central University for Nationalities, Wuhan 430074, China; eDepartment of Molecular and Cellular Physiology, Stanford University, Stanford, CA 94305; fHoward Hughes Medical Institute, Stanford University, Stanford, CA 94305; gCenter for Mitochondrial Biology and Medicine, The Key Laboratory of Biomedical Information Engineering of Ministry of Education, School of Life Science and Technology, Xi’an Jiaotong University, Xi’an 710049, China; hDepartment of Neurology and Neurological Sciences, Stanford University, Stanford, CA 94305; iDepartment of Structural Biology, Stanford University, Stanford, CA 94305; and jDepartment of Photon Science, Stanford University, Stanford, CA 94305 Contributed by Axel T. Brunger, August 25, 2016 (sent for review June 21, 2016; reviewed by Jeremy S. Dittman and Erdem Karatekin) In presynaptic nerve terminals, complexin regulates spontaneous membranes via a membrane-binding motif (20, 21). -
Is Synaptotagmin the Calcium Sensor? Motojiro Yoshihara, Bill Adolfsen and J Troy Littleton
315 Is synaptotagmin the calcium sensor? Motojiro Yoshihara, Bill Adolfsen and J Troy Littletonà After much debate, recent progress indicates that the synaptic synaptotagmins, which are transmembrane proteins con- vesicle protein synaptotagmin I probably functions as the taining tandem calcium-binding C2 domains (C2A and calcium sensor for synchronous neurotransmitter release. C2B) (Figure 1a). Synaptotagmin I is an abundant cal- Following calcium influx into presynaptic terminals, cium-binding synaptic vesicle protein [8,9] that has been synaptotagmin I rapidly triggers the fusion of synaptic vesicles demonstrated via genetic studies to be important for with the plasma membrane and underlies the fourth-order efficient synaptic transmission in vivo [10–13]. The C2 calcium cooperativity of release. Biochemical and genetic domains of synaptotagmin I bind negatively-charged studies suggest that lipid and SNARE interactions underlie phospholipids in a calcium-dependent manner [9,14,15, synaptotagmin’s ability to mediate the incredible speed of 16–18]. There is compelling evidence that phospholipid vesicle fusion that is the hallmark of fast synaptic transmission. binding is an effector interaction in vesicle fusion, as the calcium dependence of this process ( 74 mM) and its Addresses rapid kinetics (on a millisecond scale) (Figure 1b) fit Picower Center for Learning and Memory, Department of Biology and reasonably well with the predicted requirements of Department of Brain and Cognitive Sciences, Massachusetts synaptic transmission [15]. In addition to phospholipid Institute of Technology, Cambridge, MA 02139, USA Ãe-mail: [email protected] binding, the calcium-stimulated interaction between synaptotagmin and the t-SNAREs syntaxin and SNAP- 25 [15,19–23] provides a direct link between calcium and Current Opinion in Neurobiology 2003, 13:315–323 the fusion complex. -
Sorting Nexin-21 Is a Scaffold for the Endosomal Recruitment of Huntingtin
Danson, C. , Pearson, N., Heesom, K., & Cullen, P. (2018). Sorting nexin-21 is a scaffold for the endosomal recruitment of huntingtin. Journal of Cell Science. https://doi.org/10.1242/jcs.211672 Publisher's PDF, also known as Version of record Link to published version (if available): 10.1242/jcs.211672 Link to publication record in Explore Bristol Research PDF-document This is the final published version of the article (version of record). It first appeared online via Company of Biologists at http://jcs.biologists.org/content/131/17/jcs211672 . Please refer to any applicable terms of use of the publisher. University of Bristol - Explore Bristol Research General rights This document is made available in accordance with publisher policies. Please cite only the published version using the reference above. Full terms of use are available: http://www.bristol.ac.uk/red/research-policy/pure/user-guides/ebr-terms/ © 2018. Published by The Company of Biologists Ltd | Journal of Cell Science (2018) 131, jcs211672. doi:10.1242/jcs.211672 RESEARCH ARTICLE Sorting nexin-21 is a scaffold for the endosomal recruitment of huntingtin Chris M. Danson1, Neil Pearson1, Kate J. Heesom2 and Peter J. Cullen1,* ABSTRACT transport from the trans-Golgi network (TGN) (Maxfield and The endo-lysosomal network serves an essential role in determining McGraw, 2004; Johannes and Popoff, 2008; Grant and Donaldson, the fate of endocytosed transmembrane proteins and their associated 2009; Huotari and Helenius, 2011; Johannes and Wunder, 2011; proteins and lipids. Sorting nexins (SNXs) play a central role in the Hsu et al., 2012). These pathways converge at the sorting endosome, functional organisation of this network. -
Fluorescence Lifetime Imaging Microscopy Reveals Rerouting Of
RESEARCH ARTICLE Fluorescence Lifetime Imaging Microscopy reveals rerouting of SNARE trafficking driving dendritic cell activation Danie¨ lle Rianne Jose´ Verboogen, Natalia Gonza´ lez Mancha, Martin ter Beest, Geert van den Bogaart* Department of Tumor Immunology, Radboud Institute for Molecular Life Sciences, Radboud University Medical Center, Nijmegen, Netherlands Abstract SNARE proteins play a crucial role in intracellular trafficking by catalyzing membrane fusion, but assigning SNAREs to specific intracellular transport routes is challenging with current techniques. We developed a novel Fo¨ rster resonance energy transfer-fluorescence lifetime imaging microscopy (FRET-FLIM)-based technique allowing visualization of real-time local interactions of fluorescently tagged SNARE proteins in live cells. We used FRET-FLIM to delineate the trafficking steps underlying the release of the inflammatory cytokine interleukin-6 (IL-6) from human blood- derived dendritic cells. We found that activation of dendritic cells by bacterial lipopolysaccharide leads to increased FRET of fluorescently labeled syntaxin 4 with VAMP3 specifically at the plasma membrane, indicating increased SNARE complex formation, whereas FRET with other tested SNAREs was unaltered. Our results revealed that SNARE complexing is a key regulatory step for cytokine production by immune cells and prove the applicability of FRET-FLIM for visualizing SNARE complexes in live cells with subcellular spatial resolution. DOI: 10.7554/eLife.23525.001 *For correspondence: geert. [email protected] Introduction Competing interests: The One of the central paradigms in cell biology is that all intracellular membrane fusion, except for authors declare that no mitochondrial fusion, is catalyzed by soluble NSF (N-ethylmaleimide-sensitive fusion protein) attach- competing interests exist. ment protein receptor (SNARE) proteins (Hong, 2005; Jahn and Scheller, 2006). -
Syntaxin 2 Acts As Inhibitory SNARE for Insulin Granule Exocytosis
Page 1 of 37 Diabetes Syntaxin 2 Acts as Inhibitory SNARE for Insulin Granule Exocytosis Dan Zhu1,4, Li Xie1,4, Youhou Kang1,4, Subhankar Dolai1,4, Jakob Bondo Hansen1, Tairan Qin1, Huanli Xie1, Tao Liang1, Deborah C Rubin3, Lucy Osborne1,2, Herbert Y. Gaisano1 Affiliations: 1Departments of Medicine and 2Molecular Genetics, University of Toronto, Toronto, ON, Canada 3Departments of Medicine and Developmental Biology, Washington University School of Medicine, St. Louis, MO, USA 4Equal contributors Running Title: Syntaxin 2 deletion increases secretion Correspondence to: Herbert Y. Gaisano University of Toronto, 1 King’s College Circle, Rm. 7368 Toronto, ON, Canada, M5S 1A8, Tel.: (416)978-1526 Email: [email protected] 1 Diabetes Publish Ahead of Print, published online January 23, 2017 Diabetes Page 2 of 37 ABSTRACT Of the four syntaxins (Syns) specialized for exocytosis, syntaxin-2 is the least understood. Here, we employed syntaxin-2/epimorphin knockout (KO) mice to examine the role of syntaxin-2 in insulin secretory granule (SG) exocytosis. Unexpectedly, syntaxin-2 KO mice exhibited paradoxical superior glucose homeostasis resulting from an enhanced insulin secretion. This was confirmed in vitro by pancreatic islet perifusion showing an amplified biphasic glucose- stimulated insulin secretion (GSIS) arising from an increase in size of the readily-releasable pool of insulin SGs and enhanced SG pool refilling. The increase in insulin exocytosis was attributed mainly from an enhanced recruitment of the larger pool of newcomer SGs that undergoes no residence time on plasma membrane before fusion, and to lesser extent also the predocked SGs. Consistently, syntaxin-2 depletion resulted in stimulation-induced increase in abundance of exocytotic complexes we previous demonstrated to mediate the fusion of newcomer SGs (Syn- 3/VAMP8/SNAP25/Munc18b) and predocked SGs (Syn-1A/VAMP2/SNAP25/Muncn18a).