A Guide to Monte Carlo Simulations in Statistical Physics, Third Edition
Total Page:16
File Type:pdf, Size:1020Kb
Load more
Recommended publications
-
University of Cincinnati
UNIVERSITY OF CINCINNATI Date: ___________________8th August 2008 I, ________________________________________________Prashant Rajan _________, hereby submit this work as part of the requirements for the degree of: Master of Science in: Department of Chemical and Materials Engineering It is entitled : Understanding aggregate morphology in colloidal systems through small-angle scattering and reverse Monte Carlo (RMC) simulations This work and its defense approved by: Chair: _______________________________Dale W. Schaefer _______________________________Greg Beaucage _______________________________Jude Iroh _______________________________Steve Clarson _______________________________ Understanding aggregate morphology in colloidal systems through small- angle scattering and reverse Monte Carlo simulations A thesis submitted to the Division of Research and Advanced Studies of the University of Cincinnati in partial fulfillment of the requirements for the degree of Master of Science in the Department of Chemical and Materials Engineering of the College of Engineering 2008 by Prashant Rajan B.E. University of Pune, Pune, India Committee Chair: Professor Dale W. Schaefer Abstract We have studied the three dimensional structure of aggregated colloidal silica at sub- micron length scales. Our efforts are part of an integrated research project[1-3] focused on constructing a verifiable model for reinforcement of elastomers by colloidal fillers using small- angle scattering techniques. Our work is aimed at developing a simulation-based modeling tool that enables us to visualize the microstructure of reinforcing fillers in three dimensions by fitting small-angle scattering data. We have developed a program based on ‘ C’ programming language to describe scattering from a single aggregate. Our simulation creates the aggregate using a particle-cluster aggregation mechanism. The simulation then proceeds to make random moves on the aggregate surface while simultaneously fitting small angle scattering data on the system under study. -
Dr Matt Tucker
Dr Matt Tucker Diffraction Group Leader, Neutron Sciences Directorate, One Bethel Valley Road, MS-6475, Oak Ridge, TN, 37831 Mobile: +1 865 340 5950 E-Mail: [email protected] Current Employer: UT-Battelle Employment and education Diffraction Group Leader Oak Ridge National Lab, USA 2017 – Present Advance Diffraction Group Leader Spallation Neutron Source, USA 2016 – 2017 Joint appointment with Diamond Light Source Ltd, UK 2013 – 2016 Instrument Scientist on Polaris at ISIS spallation source, UK 2013 – 2016 Instrument Scientist on PEARL at ISIS spallation source, UK 2005 – 2013 Postdoctoral Researcher, Earth Sciences, University of Cambridge, UK 1998 – 2005 PhD in Condensed Matter Physics, University of Kent at Canterbury, UK 1995 – 1998 BSc (Hons) Physics with Medical Physics, Cardiff University, UK 1992 – 1995 General Skills Scientific: Powder diffraction, Total scattering, High pressure studies, Chemical synthesis, Rietveld analysis, McStas simulations and Reverse Monte Carlo analysis and software development. Computing: Languages used: Fortran, Python, C, C++, C shell; Operating systems: Windows, Linux, Mac OS, VMS. Communication: I give regular presentations at national and international meetings. I am the co-author of over 155 scientific publications. I have arranged and chaired several scientific meetings, conference sessions and PDF workshops. As described above, I have regular meetings with my group members and external teams to ensure clear and effective communication. International & National presentations (15 talks, 6 countries) -
Modeling the Amorphous Structure of a Mechanically Alloyed
Modeling the amorphous structure of a mechanically alloyed Ti50Ni25Cu25 alloy using anomalous wide-angle x-ray scattering and reverse Monte Carlo simulations J.C. de Limaa,*, C.M. Poffob, S.M. Souzac, K.D. Machadod, D.M. Trichêsc, T.A. Grandia, R.S. de Biasie aDepartamento de Física, Universidade Federal de Santa Catarina, Campus Universitário Trindade, S/N, C.P. 476, 88040-900 Florianópolis, Santa Catarina, Brazil bDepartamento de Engenharia Mecânica, Universidade Federal de Santa Catarina, Campus Universitário Trindade, S/N, C.P. 476, 88040-900 Florianópolis, Santa Catarina, Brazil cDepartamento de Física, Universidade Federal do Amazonas, 3000 Japiim, 69077-000 Manaus, Amazonas, Brazil. dDepartamento de Física, Centro Politécnico, Universidade Federal do Paraná, 81531- 990, Curitiba, Paraná, Brazil eSeção de Engenharia Mecânica e de Materiais, Instituto Militar de Engenharia, 22290-270 Rio de Janeiro, RJ, Brazil A B S T R A C T An amorphous Ti50Ni25Cu25 alloy was produced by 19 h of mechanical alloying. Anomalous wide angle x-ray scattering data were collected at six energies and six total scattering factors were obtained. By considering the data collected at two energies close to the Ni and Cu K edges, two differential anomalous scattering factors around the Ni and Cu atoms were obtained, showing the chemical environments around these atoms are different. The eight factors were used as input data to the reverse Monte Carlo method used to compute the partial structure factors STi-Ti(K), STi-Cu(K), STi-Ni(K), SCu- Cu(K), SCu-Ni(K) and SNi-Ni(K). From their Fourier transformation, the partial pair distribution functions GTi-Ti(r), GTi-Cu(r), GTi-Ni(r), GCu-Cu(r), GCu-Ni(r) and GNi-Ni(r) were obtained, and the coordination numbers and interatomic atomic distances for the first neighbors were determined. -
Structure Modeling with X-Ray Absorption and Reverse Monte Carlo: Applications to Water
Mikael Leetmaa Mikael Structure Modeling with X-ray Absorption and Reverse Monte Carlo: Applications to Water Mikael Leetmaa Reverse Monte Carlo: Applications to Water to Applications Monte Carlo: Reverse Absorption and Structure Modeling with X-ray ISBN 978-91-7155-972-2 Physics Department Doctoral Thesis in Chemical Physics at Stockholm University, Sweden 2009 Abstract Water is an important substance. It is part of us, of our environment, and is a fundamental prerequisite for the existence of life as we know it. The structure of water is still, after over 100 years of research on the subject, however under debate. In this thesis x-ray absorption spectroscopy (XAS) and reverse Monte Carlo (RMC) modeling are used to search for structural solutions of water consistent with many different experimental data sets, with emphasis on the combination of different ex- perimental techniques for a reliable structure determination. Neutron and x-ray diffraction are analyzed in combination with the more recent synchrotron radiation based XAS. Geometrical criteria for H-bonding are implemented in RMC to drive the fits and allow to evaluate differently H-bonded structure models against the data. It is shown that the available diffraction data put little constraints on the type of H-bond topology or O-O-O tetrahedrality for the structure of liquid water. It is also demonstrated that classical MD simulations, using some of the most common interaction potentials for water, give rise to O-O and O-H pair-correlation functions with too sharp first peaks at too short distances to be in agreement with diffraction, and furthermore that requiring a large fraction of broken H-bonds is not in itself enough for a structure model to reproduce the experimental XAS. -
Kurt Binder Biography December 24, 2020
Kurt Binder Biography December 24, 2020. Patrick Charbonneau Kurt Binder (February 10, 1944-), was born in Austria, the son of Eduard Binder, a technical engineer, and Anna Binder, née Eppel. He spent his childhood in Vienna, where he attended public schools. Binder studied technical physics at Technical University of Vienna (1962-1969), obtaining a Diploma in Physics in 1967, and a PhD in Technical Sciences in 1969, for a thesis entitled “Berechnung der Spinkorrelationsfunktionen von Ferromagnetika” (Calculation of the spin correlation functions in ferromagnets), under the supervision of Helmut Rauch. He was then staff scientist at the Technical University of Munich (1969-1974), taking leaves of absence for an IBM postdoctoral fellowship at the IBM Zürich Research Laboratory (1972-1973), and for a six-month visit of Pierre Hohenberg at Bell Laboratories, in New Jersey (1974). Binder then became Professor of Theoretical Physics at the University of Saarland in Saarbrücken (1974-1977). He subsequently took a Full Professor position at the University of Cologne with a joint appointment at the Kernforschungsanlage (KFA) Jülich (1977-1983), and then a Full Professor of Theoretical Physics position at the Johannes Gutenberg-University in Mainz, where he became emeritus in 2012. From his initial introduction of Monte Carlo simulations to the study of critical phenomena, during his PhD thesis, Binder became a leader developing and applying computer simulations to various problems in condensed matter and soft matter physics. Starting in the mid-‘70s, this effort included the study of disordered systems, such as spin glasses, quadrupolar glasses, and structural glasses. His early computational studies of the Edwards-Anderson model, in particular, seeded a numerical effort that is ongoing to this day, and eventually led him to co-author (with Peter Young) a seminal review on spin glasses for Review of Modern Physics (1986). -
Nikolaos Fytas – Curriculum Vitae
Nikolaos Fytas – Curriculum Vitae Coventry University Phone: +44 - 2477 659244 Department of Mathematics and Physics Email: [email protected] Centre for Fluid and Complex Systems Homepage: http://users.complexity-coventry.org/ fytas/index.html Coventry CV1 5FB https://pureportal.coventry.ac.uk/en/persons/nikolaos-fytas United Kingdom Personal Greek Citizen. Born on October 24, 1980 (Athens, Greece). Military Service: Fulfilled (2/2011 – 11/2011). Academic Positions Department of Mathematics and Physics & Centre for Fluid and Complex Systems Coventry University, UK Assistant Professor (2014 – Present). Lecturer (2013 – 2014). Postdoctoral Research Positions Biomolecular Physics Laboratory, National Centre of Scientific Research Demokritos, Athens, Greece (2012 – 2013). Department of Theoretical Physics, Complutense University, Madrid, Spain (2011 – 2012). Department of Materials Science, University of Patras, Greece (2010 – 2011). Department of Physics, University of Athens, Greece (2009 – 2010). Education PhD in Condensed Matter Physics, Summa Cum Laude, Department of Physics, University of Athens, Greece (2009). Nikolaos Fytas – Curriculum Vitae 2 Thesis Title: Statistical Physics of Lattice Models of Complex and Disordered Systems. Advisor: Assoc. Prof. Anastasios Malakis. MSc in Condensed Matter Physics, Excellent (9.67/10), Department of Physics, University of Athens, Greece (2005). BSc in Physics, Excellent (8.88/10), Department of Physics, University of Athens, Greece (2003). Teaching Experience (≈ 1,300 Lecturing Hours) -
2016 Neutron Experiment Descriptions
2016 Neutron Experiment descriptions: N1: Triple-Axis Spectrometers, HFIR HB-1A & HB-3 Spin wave and phonon dispersion in Fe-Ga solid solutions Fe-Ga alloys with appropriate composition and heat treatment, exhibit giant magnetostriction in a polycrystalline and ductile form. The tetragonal magnetostriction coefficient, λ100, of Fe-Ga can be up to 15 times that of pure Fe. This makes these materials of tremendous scientific and technological interest for use in devices such as actuators, transducers and sensors. Elastic constant measurements show that the shear elastic constant 1/2(C11-C12) decreases with increasing gallium concentration and extrapolates to zero at approximately 26 at.% Ga. The slope of the phonon dispersion curve at low-q of the T2[110] branch is a measure of that elastic constant and hence the interest in measuring phonons in these materials. With the large magnetoelastic interactions in such a material, it is also of interest to measure the spin wave dispersion. The triple-axis spectrometers HB-1A and HB-3 will be used to measure both phonon and spin waves of two compositions of Fe-Ga alloys. N2: Powder Diffractometer, HFIR HB-2A Magnetic structure of NiO Neutron diffraction measurements will be performed to investigate the onset of long- range magnetic order in NiO. Data will be collected at various temperatures, ranging from 600K to 288K, using the Neutron Powder Diffractometer at the HFIR. Rietveld analysis of the crystal and low-temperature magnetic structure will be carried out using FullProf Suite software. The results obtained will be discussed and compared with those reported in earlier studies. -
Binder K, Ed. Monte Carlo Methods in Statistical Physics. Berlin, FRG: Springer-Verlag, 1979
® CC/NUMBER 12 This Week’s Citation Classic MARCH 20, Binder K, ed. Monte Carlo methods in statistical physics. Berlin, FRG: Springer-Verlag, 1979. 376 p. (Chapters by Binder K, Ceperley D M, Landau D P, Levesque D, and Muller-Krumbhaar H, as first authors.) [Institut für Festkdrperforscttung der Kernforschungsanlage Jiilich GmbH, Federal Republic of Germanyl This book deals with the computer simulation ofther- of master equations, which formthe basis for studies modynamic properties 05 many-body systems. Both of critical dynamics, of diffusion and unmixing phe- the theoretical background and practical realization nomena, and so on. With 0. Stauffer I started to of simulations using random numbers are described, explore “clusters” in the Ising model in an attempt and the rich information gained on static and dynamic to elucidate nucleation theory, while since 1975 I phenomena in various systems is reviewed. [The SC/a have interacted with 0.1’. Landau on the Monte indicates that this book has been cited in over 670 Carlo simulation of mutticritical phenomena and of publications.l adsorbed surface layers. All these very successful studies showed clearly that the Monte Carlo method is a powerful tool for all kinds of interacting many- body systems, and thus this work found more and more attention. Computer Simulation— After I had presented several aspects of this work A Third Branch of Physics in invited talks at various conferences, ft Lotsch from Springer-Verlag asked me in 1977 whether Kurt Binder there was a need for a book describing these meth- Institute of Physics ods. 4Since I had already written an extensive re- University of Mainz view, I knew that the applications of Monte Carlo D-6500 Mainz methods in statistical physics were too diverse to be Federal Republic of Germany discussed by a single person. -
Lecture Notes in Physics
Lecture Notes in Physics Editorial Board R. Beig, Vienna, Austria J. Ehlers, Potsdam, Germany U. Frisch, Nice, France K. Hepp, Ziirich, Switzerland R. L. ]affe, Cambridge, MA, USA R. Kippenhahn, G6ttingen, Germany I. Ojima, Kyoto, Japan H. A. Weidenmfiller, Heidelberg, Germany J. Wess, Miinchen, Germany ]. Zittartz, K61n, Germany Managing Editor W. Beiglb6ck Assisted by Mrs. Edwina Pfendbach c/o Springer-Verlag, Physics Editorial Department II Tiergartenstrasse 17, D-69121 Heidelberg, Germany Springer Berlin Heidelberg New York Barcelona Hong Kong London Milan Paris Singapore Tokyo The Editorial Policy for Proceedings The series Lecture Notes in Physics reports new developments in physical research and teaching - quickly, informally, and at a high level. The proceedings to be considered for publication in this series should be limited to only a few areas of research, and these should be closely related to each other. The contributions should be of a high standard and should avoid lengthy redraftings of papers already published or about to be published elsewhere. As a whole, the proceedings should aim for a balanced presentation of the theme of the conference including a description of the techniques used and enough motivation for a broad readership. It should not be assumed that the published proceedings must reflect the conference in its entirety. (A listing or abstracts of papers presented at the meeting but not included in the proceedings could be added as an appendix.) When applying for publication in the series Lecture Notes in Physics the volume's editor(s) should submit sufficient material to enable the series editors and their referees to make a fairly accurate evaluation (e.g. -
A Guide to Monte Carlo Simulations in Statistical Physics, Second Edition David P
Cambridge University Press 0521842387 - A Guide to Monte Carlo Simulations in Statistical Physics, Second Edition David P. Landau and Kurt Binder Frontmatter More information A Guide to Monte Carlo Simulations in Statistical Physics, Second Edition This new and updated deals with all aspects of Monte Carlo simulation of complex physical systems encountered in condensed-matter physics and sta- tistical mechanics as well as in related fields, for example polymer science, lattice gauge theory and protein folding. After briefly recalling essential background in statistical mechanics and prob- ability theory, the authors give a succinct overview of simple sampling meth- ods. The next several chapters develop the importance sampling method, both for lattice models and for systems in continuum space. The concepts behind the various simulation algorithms are explained in a comprehensive fashion, as are the techniques for efficient evaluation of system configurations generated by simulation (histogram extrapolation, multicanonical sampling, Wang-Landau sampling, thermodynamic integration and so forth). The fact that simulations deal with small systems is emphasized. The text incorporates various finite size scaling concepts to show how a careful analysis of finite size effects can be a useful tool for the analysis of simulation results. Other chapters also provide introductions to quantum Monte Carlo methods, aspects of simulations of growth phenomena and other systems far from equilibrium, and the Monte Carlo Renormalization Group approach to cri- tical phenomena. A brief overview of other methods of computer simulation is given, as is an outlook for the use of Monte Carlo simulations in disciplines outside of physics. Many applications, examples and exercises are provided throughout the book. -
A Guide to Monte Carlo Simulations in Statistical Physics - David P
Cambridge University Press 0521653142 - A Guide to Monte Carlo Simulations in Statistical Physics - David P. Landau and Kurt Binder Frontmatter/Prelims More information A Guide to Monte Carlo Simulations in Statistical Physics This book deals with all aspects of Monte Carlo simulation of complex physical systems encountered in condensed-matter physics and statistical mechanics as well as in related fields, for example polymer science and lattice gauge theory. After briefly recalling essential background in statistical mechanics and prob- ability theory, the authors give a succinct overview of simple sampling meth- ods. The next several chapters develop the importance sampling method, both for lattice models and for systems in continuum space. The concepts behind the various simulation algorithms are explained in a comprehensive fashion, as are the techniques for efficient evaluation of system configurations generated by simulation (histogram extrapolation, multicanonical sampling, thermodynamic integration and so forth). The fact that simulations deal with small systems is emphasized, and the text incorporates various finite size scaling concepts to show how a careful analysis of finite size effects can be a useful tool for the analysis of simulation results. Other chapters also provide introductions to quantum Monte Carlo methods, aspects of simulations of growth phenomena and other systems far from equilibrium, and the Monte Carlo renormalization group approach to critical phenomena. Throughout the book there are many applications, examples, and exercises to help the reader in a thorough study of this book; furthermore, many up-to-date refer- ences to more specialized literature are also provided. This book will be bought by graduate students who have to deal with com- puter simulations in their research, as well as by postdoctoral researchers, in both physics and physical chemistry. -
Rmcprofile User Manual
RMCProfile User Manual Code version 6.7.4 Matt Tucker, Martin Dove, Andrew Goodwin, Anthony Phillips, David Keen, Helen Playford, Wojciech A. Slawinski, Igor Levin, Victor Krayzman, Maksim Eremenko, Yuanpeng Zhang February 21, 2019 RMCProfile Manual v6.7.4 CONTENTS Contents 1 Introduction 3 1.1 We know you don’t read manuals!3 1.2 What and why of RMC4 1.3 RMCProfile introduction6 2 Capabilities 9 2.1 Fitting neutron and X-ray total scattering data9 2.2 Fitting PDF data 10 2.3 Fitting the Bragg profile 11 2.4 Distance-window constraints 12 2.5 Interatomic potentials 13 2.6 Bond valence constraints 13 2.7 Modelling atomic site disorder through atom-swap moves 14 2.8 Coordination Constraints 14 2.9 Polyhedral restraints 14 2.10 Magnetic structure modelling 15 2.11 Fitting EXAFS data 23 2.12 Producing starting configurations 23 2.13 XML output files 24 3 Installing and Running RMCProfile 28 3.1 Installation 28 3.2 Setting up the files for an RMCProfile calculation 29 3.3 Running RMCProfile 30 3.4 Output files 31 4 Input Files 33 4.1 RMCProfile main data file 33 4.2 Neutron and X-ray coefficients 62 4.3 Using experimental data 63 4.4 Using magnetism 67 4.5 Using the Bragg profile 69 4.6 Using EXAFS data 70 4.7 Using potentials 70 4.8 Using Bond valence sum 80 4.9 Using constraints and restraints 81 4.10 Polyhedral restraints 81 4.11 RMC Version 6 format configuration files 87 4.12 Experimental data files 90 4.13 Bragg scattering 92 4.14 RMCProfile version 3 files 94 4.15 Upgrade to v6 98 1/176 RMCProfile Manual v6.7.4 CONTENTS 5 Examples 100 5.1 Using scattering