Death-Feigning As Defensive Behaviour in Blue-Tailed Microteiid Lizard Micrablepharus Atticolus Rodrigues, 1996
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Modeling and Partitioning the Nucleotide Evolutionary Process for Phylogenetic and Comparative Genomic Inference
University of Central Florida STARS Electronic Theses and Dissertations, 2004-2019 2007 Modeling And Partitioning The Nucleotide Evolutionary Process For Phylogenetic And Comparative Genomic Inference Todd Castoe University of Central Florida Part of the Biology Commons Find similar works at: https://stars.library.ucf.edu/etd University of Central Florida Libraries http://library.ucf.edu This Doctoral Dissertation (Open Access) is brought to you for free and open access by STARS. It has been accepted for inclusion in Electronic Theses and Dissertations, 2004-2019 by an authorized administrator of STARS. For more information, please contact [email protected]. STARS Citation Castoe, Todd, "Modeling And Partitioning The Nucleotide Evolutionary Process For Phylogenetic And Comparative Genomic Inference" (2007). Electronic Theses and Dissertations, 2004-2019. 3111. https://stars.library.ucf.edu/etd/3111 MODELING AND PARTITIONING THE NUCLEOTIDE EVOLUTIONARY PROCESS FOR PHYLOGENETIC AND COMPARATIVE GENOMIC INFERENCE by TODD A. CASTOE B.S. SUNY – College of Environmental Science and Forestry, 1999 M.S. The University of Texas at Arlington, 2001 A dissertation submitted in partial fulfillment of the requirements for the degree of Doctor of Philosophy in Biomolecular Sciences in the Burnett College of Biomedical Sciences at the University of Central Florida Orlando, Florida Spring Term 2007 Major Professor: Christopher L. Parkinson © 2007 Todd A. Castoe ii ABSTRACT The transformation of genomic data into functionally relevant information about the composition of biological systems hinges critically on the field of computational genome biology, at the core of which lies comparative genomics. The aim of comparative genomics is to extract meaningful functional information from the differences and similarities observed across genomes of different organisms. -
De Los Reptiles Del Yasuní
guía dinámica de los reptiles del yasuní omar torres coordinador editorial Lista de especies Número de especies: 113 Amphisbaenia Amphisbaenidae Amphisbaena bassleri, Culebras ciegas Squamata: Serpentes Boidae Boa constrictor, Boas matacaballo Corallus hortulanus, Boas de los jardines Epicrates cenchria, Boas arcoiris Eunectes murinus, Anacondas Colubridae: Dipsadinae Atractus major, Culebras tierreras cafés Atractus collaris, Culebras tierreras de collares Atractus elaps, Falsas corales tierreras Atractus occipitoalbus, Culebras tierreras grises Atractus snethlageae, Culebras tierreras Clelia clelia, Chontas Dipsas catesbyi, Culebras caracoleras de Catesby Dipsas indica, Culebras caracoleras neotropicales Drepanoides anomalus, Culebras hoz Erythrolamprus reginae, Culebras terrestres reales Erythrolamprus typhlus, Culebras terrestres ciegas Erythrolamprus guentheri, Falsas corales de nuca rosa Helicops angulatus, Culebras de agua anguladas Helicops pastazae, Culebras de agua de Pastaza Helicops leopardinus, Culebras de agua leopardo Helicops petersi, Culebras de agua de Peters Hydrops triangularis, Culebras de agua triángulo Hydrops martii, Culebras de agua amazónicas Imantodes lentiferus, Cordoncillos del Amazonas Imantodes cenchoa, Cordoncillos comunes Leptodeira annulata, Serpientes ojos de gato anilladas Oxyrhopus petolarius, Falsas corales amazónicas Oxyrhopus melanogenys, Falsas corales oscuras Oxyrhopus vanidicus, Falsas corales Philodryas argentea, Serpientes liana verdes de banda plateada Philodryas viridissima, Serpientes corredoras -
“Relações Evolutivas Entre Ecologia E Morfologia Serpentiforme Em Espécies De Lagartos
UNIVERSIDADE DE SÃO PAULO FFCLRP - DEPARTAMENTO DE BIOLOGIA PROGRAMA DE PÓS-GRADUAÇÃO EM BIOLOGIA COMPARADA “Relações evolutivas entre ecologia e morfologia serpentiforme em espécies de lagartos microteiídeos (Sauria: Gymnophthalmidae)”. Mariana Bortoletto Grizante Dissertação apresentada à Faculdade de Filosofia, Ciências e Letras de Ribeirão Preto da USP, como parte das exigências para a obtenção do título de Mestre em Ciências, Área: Biologia Comparada. Ribeirão Preto 2009 UNIVERSIDADE DE SÃO PAULO FFCLRP - DEPARTAMENTO DE BIOLOGIA PROGRAMA DE PÓS-GRADUAÇÃO EM BIOLOGIA COMPARADA “Relações evolutivas entre ecologia e morfologia serpentiforme em espécies de lagartos microteiídeos (Sauria: Gymnophthalmidae)”. Mariana Bortoletto Grizante Dissertação apresentada à Faculdade de Filosofia, Ciências e Letras de Ribeirão Preto da USP, como parte das exigências para a obtenção do título de Mestre em Ciências, Área: Biologia Comparada. Orientadora: Profª. Drª. Tiana Kohlsdorf Ribeirão Preto 2009 “Relações evolutivas entre ecologia e morfologia serpentiforme em espécies de lagartos microteiídeos (Sauria: Gymnophthalmidae)”. Mariana Bortoletto Grizante Ribeirão Preto, _______________________________ de 2009. _________________________________ _________________________________ Prof(a). Dr(a). Prof(a). Dr(a). _________________________________ _________________________________ Prof(a). Dr(a). Prof(a). Dr(a). _________________________________ Prof ª. Drª. Tiana Kohlsdorf (Orientadora) Dedicado a Antonio Bortoletto e Vainer Grisante, exemplos de curiosidade e perseverança diante dos desafios. AGRADECIMENTOS Realizar esse trabalho só se tornou possível graças à colaboração e ao incentivo de muitas pessoas. A elas, agradeço e com elas, divido a alegria de concluir este trabalho. À Tiana, pela orientação, entusiasmo e confiança, pelas oportunidades, pela amizade, e pelo que ainda virá. Por fazer as histórias terem pé e cabeça! À FAPESP, pelo financiamento desse projeto (processo 2007/52204-8). -
A New Computing Environment for Modeling Species Distribution
EXPLORATORY RESEARCH RECOGNIZED WORLDWIDE Botany, ecology, zoology, plant and animal genetics. In these and other sub-areas of Biological Sciences, Brazilian scientists contributed with results recognized worldwide. FAPESP,São Paulo Research Foundation, is one of the main Brazilian agencies for the promotion of research.The foundation supports the training of human resources and the consolidation and expansion of research in the state of São Paulo. Thematic Projects are research projects that aim at world class results, usually gathering multidisciplinary teams around a major theme. Because of their exploratory nature, the projects can have a duration of up to five years. SCIENTIFIC OPPORTUNITIES IN SÃO PAULO,BRAZIL Brazil is one of the four main emerging nations. More than ten thousand doctorate level scientists are formed yearly and the country ranks 13th in the number of scientific papers published. The State of São Paulo, with 40 million people and 34% of Brazil’s GNP responds for 52% of the science created in Brazil.The state hosts important universities like the University of São Paulo (USP) and the State University of Campinas (Unicamp), the growing São Paulo State University (UNESP), Federal University of São Paulo (UNIFESP), Federal University of ABC (ABC is a metropolitan region in São Paulo), Federal University of São Carlos, the Aeronautics Technology Institute (ITA) and the National Space Research Institute (INPE). Universities in the state of São Paulo have strong graduate programs: the University of São Paulo forms two thousand doctorates every year, the State University of Campinas forms eight hundred and the University of the State of São Paulo six hundred. -
Sobre a BIOTA NEOTROPICA
Biota Neotrop. vol. 9, no. 1, jan./mar. 2009 ISSN 1678-6424 ISSN 1678-6424 vol. 9, no. 1, jan./mar. 2009 jan./mar. 1, no. 9, vol. Sumário Artigos Uma revisão da distribuição de Ocotea curucutuensis J.B. Baitello na região sudeste do Brasil vol. 9, no. 1, jan./mar. 2009 Frederico Alexandre Roccia Dal Pozzo Arzolla, João Batista Baitello, George John Shepherd, Gláucia Cortez Ramos de Paula & Ricardo Bertoncello ...............................................21 Novos registros, sinonímia e descrição do macho de Culicoides horticola Lutz (Diptera: Ceratopogonidae) Maria Luiza Felippe-Bauer & Gustavo Ricardo Spinelli .....................................................................................................................................................................................................27 Os pequenos mamíferos da altamente impactada Floresta Atlântica do Nordeste do Brasil, Centro de Endemismo Pernambuco Paulo Henrique Asfora & Antonio Rossano Mendes Pontes ..............................................................................................................................................................................................31 Ácaros associados ao cafeeiro (Coffea spp.) no estado de São Paulo, Brasil. Parte I. Mesostigmata Jeferson Luiz de Carvalho Mineiro, Adalton Raga, Mario Eidi Sato & Antonio Carlos Lofego ...........................................................................................................................................37 Relações entre diversidade íctia e fatores hidrodinâmicos -
Literature Cited in Lizards Natural History Database
Literature Cited in Lizards Natural History database Abdala, C. S., A. S. Quinteros, and R. E. Espinoza. 2008. Two new species of Liolaemus (Iguania: Liolaemidae) from the puna of northwestern Argentina. Herpetologica 64:458-471. Abdala, C. S., D. Baldo, R. A. Juárez, and R. E. Espinoza. 2016. The first parthenogenetic pleurodont Iguanian: a new all-female Liolaemus (Squamata: Liolaemidae) from western Argentina. Copeia 104:487-497. Abdala, C. S., J. C. Acosta, M. R. Cabrera, H. J. Villaviciencio, and J. Marinero. 2009. A new Andean Liolaemus of the L. montanus series (Squamata: Iguania: Liolaemidae) from western Argentina. South American Journal of Herpetology 4:91-102. Abdala, C. S., J. L. Acosta, J. C. Acosta, B. B. Alvarez, F. Arias, L. J. Avila, . S. M. Zalba. 2012. Categorización del estado de conservación de las lagartijas y anfisbenas de la República Argentina. Cuadernos de Herpetologia 26 (Suppl. 1):215-248. Abell, A. J. 1999. Male-female spacing patterns in the lizard, Sceloporus virgatus. Amphibia-Reptilia 20:185-194. Abts, M. L. 1987. Environment and variation in life history traits of the Chuckwalla, Sauromalus obesus. Ecological Monographs 57:215-232. Achaval, F., and A. Olmos. 2003. Anfibios y reptiles del Uruguay. Montevideo, Uruguay: Facultad de Ciencias. Achaval, F., and A. Olmos. 2007. Anfibio y reptiles del Uruguay, 3rd edn. Montevideo, Uruguay: Serie Fauna 1. Ackermann, T. 2006. Schreibers Glatkopfleguan Leiocephalus schreibersii. Munich, Germany: Natur und Tier. Ackley, J. W., P. J. Muelleman, R. E. Carter, R. W. Henderson, and R. Powell. 2009. A rapid assessment of herpetofaunal diversity in variously altered habitats on Dominica. -
Micrablepharus Atticolus (SQUAMATA, GYMNOPHTHALMIDAE)
Universidade do Estado de Mato Grosso Campus de Nova Xavantina Programa de Pós-Graduação em Ecologia e Conservação NAIANE ARANTES SILVA EFEITOS DA AUTOTOMIA CAUDAL NO DESEMPENHO LOCOMOTOR DE Micrablepharus atticolus (SQUAMATA, GYMNOPHTHALMIDAE) Nova Xavantina-MT Março de 2019 i Universidade do Estado de Mato Grosso Campus de Nova Xavantina Programa de Pós-Graduação em Ecologia e Conservação EFEITOS DA AUTOTOMIA CAUDAL NO DESEMPENHO LOCOMOTOR DE Micrablepharus atticolus (SQUAMATA, GYMNOPHTHALMIDAE NAIANE ARANTES SILVA Dissertação para exame final de Mestrado apresentada ao Programa de Pós-Graduação em Ecologia e Conservação da Universidade do Estado de Mato Grosso, Campus de Nova Xavantina, para obtenção do título de mestre. Orientador: Prof. Dr. Guarino Rinaldi Colli Nova Xavantina-MT Março de 2019 ii Ficha catalográfica iii EFEITOS DA AUTOTOMIA CAUDAL NO DESEMPENHO LOCOMOTOR DE Micrablepharus atticolus (SQUAMATA, GYMNOPHTHALMIDAE) NAIANE ARANTES SILVA DISSERTAÇÃO APRESENTADA AO PROGRAMA DE PÓS-GRADUAÇÃO EM ECOLOGIA E CONSERVAÇÃO DA UNIVERSIDADE DO ESTADO DE MATO GROSSO COMO REQUISITO PARCIAL À OBTENÇÃO DO TÍTULO DE “MESTRE”. APROVADA EM 15 DE MARÇO DE 2019, PELA BANCA EXAMINADORA: ____________________________________ GUARINO RINALDI COLLI UNIVERSIDADE DE BRASÍLIA (UNB) ORIENTADOR ___________________________________ EDDIE LENZA DE OLIVEIRA UNIVERSIDADE DO ESTADO DE MATO GROSSO (UNEMAT) MEMBRO TITULAR ___________________________________ RICARDO RODRIGUES DA SILVA FILHO UNIVERSIDADE FEDERAL DO RIO GRANDE DO NORTE (UFRN) MEMBRO TITULAR ___________________________________ -
Redalyc.Comparative Studies of Supraocular Lepidosis in Squamata
Multequina ISSN: 0327-9375 [email protected] Instituto Argentino de Investigaciones de las Zonas Áridas Argentina Cei, José M. Comparative studies of supraocular lepidosis in squamata (reptilia) and its relationships with an evolutionary taxonomy Multequina, núm. 16, 2007, pp. 1-52 Instituto Argentino de Investigaciones de las Zonas Áridas Mendoza, Argentina Disponible en: http://www.redalyc.org/articulo.oa?id=42801601 Cómo citar el artículo Número completo Sistema de Información Científica Más información del artículo Red de Revistas Científicas de América Latina, el Caribe, España y Portugal Página de la revista en redalyc.org Proyecto académico sin fines de lucro, desarrollado bajo la iniciativa de acceso abierto ISSN 0327-9375 COMPARATIVE STUDIES OF SUPRAOCULAR LEPIDOSIS IN SQUAMATA (REPTILIA) AND ITS RELATIONSHIPS WITH AN EVOLUTIONARY TAXONOMY ESTUDIOS COMPARATIVOS DE LA LEPIDOSIS SUPRA-OCULAR EN SQUAMATA (REPTILIA) Y SU RELACIÓN CON LA TAXONOMÍA EVOLUCIONARIA JOSÉ M. CEI † las subfamilias Leiosaurinae y RESUMEN Enyaliinae. Siempre en Iguania Observaciones morfológicas Pleurodonta se evidencian ejemplos previas sobre un gran número de como los inconfundibles patrones de especies permiten establecer una escamas supraoculares de correspondencia entre la Opluridae, Leucocephalidae, peculiaridad de los patrones Polychrotidae, Tropiduridae. A nivel sistemáticos de las escamas específico la interdependencia en supraoculares de Squamata y la Iguanidae de los géneros Iguana, posición evolutiva de cada taxón Cercosaura, Brachylophus, -
Diet of the Lizard Ecpleopus Gaudichaudii (Gymnophthalmidae) in Atlantic Rainforest, State of Rio De Janeiro, Brazil
ZOOLOGIA 28 (5): 587–592, October, 2011 doi: 10.1590/S1984-46702011000500006 Diet of the lizard Ecpleopus gaudichaudii (Gymnophthalmidae) in Atlantic Rainforest, state of Rio de Janeiro, Brazil Thiago Maia1, 5; Mauricio Almeida-Gomes1; Carla C. Siqueira2; Davor Vrcibradic3; Mara C. Kiefer4 & Carlos Frederico D. Rocha1 1 Departamento de Ecologia, Universidade do Estado do Rio de Janeiro. Rua São Francisco Xavier 524, 20550-019 Rio de Janeiro, RJ, Brazil. 2 Programa de Pós-Graduação em Ecologia, Instituto de Biologia, Universidade Federal do Rio de Janeiro. Avenida Carlos Chagas Filho 373, Bloco A, Cidade Universitária, 21941-902 Rio de Janeiro, RJ, Brazil. 3 Departamento de Zoologia, Universidade Federal do Estado do Rio de Janeiro. Avenida Pasteur 458, Urca, 22240-290 Rio de Janeiro, RJ, Brazil. 4 Departamento de Biologia Geral, Instituto de Biologia, Universidade Federal Fluminense. Caixa Postal 100436, Centro, 24020-971 Niterói, RJ, Brazil. 5 Corresponding author. E-mail: [email protected] ABSTRACT. In this study we analyzed the diet of the gymnophthalmid lizard Ecpleopus gaudichaudii Duméril & Bibron, 1839, a typical inhabitant of the forest-floor leaf litter, in an Atlantic Forest area in the state of Rio de Janeiro, southeast- ern Brazil. The 26 individuals sampled during the study had a mean snout-vent length (SVL) of 36.2 ± 4.2 mm and a mean jaw width (JW) of 4.1 ± 0.5 mm. We did not find differences in SVL between males and females, though the sexes differed in JW when the effect of body size was factored out, with females presenting higher values. The diet of the lizards was composed exclusively of arthropods, especially isopods and orthopterans. -
Effects of Abandoned Eucalyptus Plantations on Lizard Communities in the Brazilian Cerrado
Biodivers Conserv (2014) 23:3155–3170 DOI 10.1007/s10531-014-0771-x ORIGINAL PAPER Effects of abandoned Eucalyptus plantations on lizard communities in the Brazilian Cerrado Alison M. Gainsbury • Guarino R. Colli Received: 4 November 2013 / Revised: 11 July 2014 / Accepted: 29 July 2014 / Published online: 8 August 2014 Ó Springer Science+Business Media Dordrecht 2014 Abstract The rapid expansion of human altered landscapes affects biodiversity on every continent. A fundamental goal of conservation biologists is to understand why certain species are at risk of extinction while others are able to persist in human altered landscapes. Afforestation, the conversion of unforested lands to planted forest, is rapidly altering many natural landscapes worldwide. In the Cerrado (Brazilian savanna), a global biodiversity hotspot, a shortage of government incentives has the landscape riddled with abandoned plantation forests that are not subject to active restoration projects. Studies investigating the impacts of abandoned plantations on biodiversity are strikingly limited. We examine the effects of abandoned Eucalyptus plantations on the structure of Cerrado lizard com- munities. We assessed changes in lizard capture, richness and equitability along cerrado sensu stricto—Eucalyptus transects. Our results indicate abandoned Eucalyptus plantations have subsets of Cerrado species persisting with a great loss of endemic species. The cerrado sensu stricto—Eucalyptus linear transect analysis demonstrated distance from native habitat is positively correlated with loss of biodiversity. We performed corre- spondence analyses to summarize the variation in species captures across different sites, habitats and pitfall array positions. These analyses depicted strong species associations between habitats and their pitfall array positions. This study is the first to show the negative impacts of abandoned Eucalyptus plantations on Cerrado lizard communities, serving as a cautionary tale of Cerrado biodiversity non-resilience in abandoned Eucalyptus planta- tions. -
Digit Evolution in Gymnophthalmid Lizards JULIANA G
Int. J. Dev. Biol. 58: 895-908 (2014) doi: 10.1387/ijdb.140255jg www.intjdevbiol.com Digit evolution in gymnophthalmid lizards JULIANA G. ROSCITO*,1, PEDRO M.S. NUNES2 and MIGUEL T. RODRIGUES1 1Departamento de Zoologia, Instituto de Biociências, Universidade de São Paulo-SP and 2Departamento de Zoologia, Centro de Ciências Biológicas, Universidade Federal de Pernambuco, Brazil ABSTRACT The tetrapod limb is a highly diverse structure, and reduction or loss of this structure accounts for many of the limb phenotypes observed within species. Squamate reptiles are one of the many tetrapod lineages in which the limbs have been greatly modified from the pentadactyl generalized pattern, including different degrees of reduction in the number of limb elements to complete limblessness. Even though limb reduction is widespread, the evolutionary and develop- mental mechanisms involved in the formation of reduced limb morphologies remains unclear. In this study, we present an overview of limb morphology within the microteiid lizard group Gymn- ophthalmidae, focusing on digit arrangement. We show that there are two major groups of limb- reduced gymnophthalmids. The first group is formed by lizard-like (and frequently pentadactyl) species, in which minor reductions (such as the loss of 1-2 phalanges mainly in digits I and V) are the rule; these morphologies generally correspond to those seen in other squamates. The second group is formed by species showing more drastic losses, which can include the absence of an ex- ternally distinct limb in adults. We also present the expression patterns of Sonic Hedgehog (Shh) in the greatly reduced fore and hindlimb of a serpentiform gymnophthalmid. -
From Four Sites in Southern Amazonia, with A
Bol. Mus. Para. Emílio Goeldi. Cienc. Nat., Belém, v. 4, n. 2, p. 99-118, maio-ago. 2009 Squamata (Reptilia) from four sites in southern Amazonia, with a biogeographic analysis of Amazonian lizards Squamata (Reptilia) de quatro localidades da Amazônia meridional, com uma análise biogeográfica dos lagartos amazônicos Teresa Cristina Sauer Avila-PiresI Laurie Joseph VittII Shawn Scott SartoriusIII Peter Andrew ZaniIV Abstract: We studied the squamate fauna from four sites in southern Amazonia of Brazil. We also summarized data on lizard faunas for nine other well-studied areas in Amazonia to make pairwise comparisons among sites. The Biogeographic Similarity Coefficient for each pair of sites was calculated and plotted against the geographic distance between the sites. A Parsimony Analysis of Endemicity was performed comparing all sites. A total of 114 species has been recorded in the four studied sites, of which 45 are lizards, three amphisbaenians, and 66 snakes. The two sites between the Xingu and Madeira rivers were the poorest in number of species, those in western Amazonia, between the Madeira and Juruá Rivers, were the richest. Biogeographic analyses corroborated the existence of a well-defined separation between a western and an eastern lizard fauna. The western fauna contains two groups, which occupy respectively the areas of endemism known as Napo (west) and Inambari (southwest). Relationships among these western localities varied, except between the two northernmost localities, Iquitos and Santa Cecilia, which grouped together in all five area cladograms obtained. No variation existed in the area cladogram between eastern Amazonia sites. The easternmost localities grouped with Guianan localities, and they all grouped with localities more to the west, south of the Amazon River.