1 Photophysiological Properties of the Marine

Total Page:16

File Type:pdf, Size:1020Kb

1 Photophysiological Properties of the Marine PHOTOPHYSIOLOGICAL PROPERTIES OF THE MARINE PICOEUKARYOTE PICOCHLORUM RCC 237 (TREBOUXIOPHYCEAE, CHLOROPHYTA)1 Céline Dimier, Federico Corato, Giovanni Saviello and Christophe Brunet2 Stazione Zoologica "Anton Dohrn", Villa Comunale, 80121 Naples, Italy Running title: Photophysiology of Picochlorum 1Received Accepted 2Author for correspondence: email [email protected] 1 Key index words: Fluorescence quantum yield; Non-Photochemical Quenching of fluorescence; Photoacclimation; Picoplankton; Xanthophyll Cycle; Zeaxanthin. Abbreviations: Ax, antheraxanthin; chl a, chlorophyll a; DPS, de-epoxidation state [=(Ax+Zx)/(Vx+Ax+Zx)]; DTT, Dithiotreitol; ETR, electron transport rate; FALS, Forward Angle Light Scatter; Fq'/Fm', operating efficiency of PSII; Fv/Fm, maximum photochemical efficiency of PSII; HL, High Light; LHC, Light-Harvesting Complex; LL, Low Light; ML, Moderate Light; NF, Norflurazon; NPQ, Non-photochemical quenching; PAM, Pulse Amplitude Modulation; PFD, Photon flux density; PSII, Photosystem II; RALS, Right Angle Light Scatter; RLC, Rapid light curve; Vx, violaxanthin; Zx, zeaxanthin. 2 The photophysiological properties of strain RCC 237 belonging to the marine picoplanktonic Picochlorum (Henley et al.) genus were investigated under different photon flux densities (PFD, ranging from 40 to 400 µmol photons·m-2·s-1), mainly focusing on the development of the xanthophyll cycle and its relationship with the non-photochemical quenching of fluorescence (NPQ). The xanthophyll cycle functioning and its photoprotective role was investigated by applying a progressive increase of PFD and using Dithiotreitol and Norflurazon to block specific enzymatic reactions in order to deeply study the relationship between xanthophyll cycle and NPQ. These two processes were significantly related only during the gradually increasing light periods and not during stable light periods, where NPQ and zeaxanthin were decoupled. This result reveals that NPQ is a photoprotective process developed by algae only when cells are experiencing increasing PFD or in response to stressful light variations, for instance after a sudden light shift. Results showed that the photobiological properties of Picochlorum strain RCC 237 seem to be well related to the surface water characteristics, since it is able to maintain its photosynthetic characteristics under different PFDs and to quickly activate the xanthophyll cycle under high light. 3 INTRODUCTION In natural environments, phytoplankton cells continuously experience light variations due to the diel cycle and the vertical displacement of cells within the mixed layer due to hydrodynamics. Since light is crucial for survival and success of algae in aquatic ecosystems, they have to continuously photoacclimate, through biochemical, physiological and/or morphological variations. Photophysiological properties exhibited by algae seemed to be related to the environment where they grow (Stomp et al. 2004, Strzepek and Harrison 2004), converging toward the hypothesis that light is a relevant factor driving competition, exclusion and/or diversity in the algal community (Litchman and Klausmeir 2001, Floder and Burns 2005). An important trait of phytoplankton functional diversity is cell size that is in part responsible for the variety of biological and/or ecological behaviors with respect to the environment, e.g. sinking rate, nutrient consumption, light utilization and packaging effect (Fogg 1991, Raven 1998). Picoplankton (size < 3 µm) are known to be important contributors to autotroph communities in many coastal and oceanic ecosystems (e.g. Raven 1998, Not et al. 2005). The high level of taxonomic biodiversity in the picoeukaryotic fraction (Moon-van der Staay et al. 2001, Diez et al. 2004) reinforces the key role of this group in marine ecosystem structure and functioning. Nevertheless, very few data exist on their photophysiology (e.g. Wilhem et al. 1989; Timmermans et al. 2005), in contrast to prokaryotes (e.g. Bibby et al. 2003 and references therein, Stomp et al. 2004) and to the larger cell size eukaryotic community (e.g. Casper- Lindley and Bjorkman 1998, Lavaud et al. 2004). An important photoprotective mechanism active at short temporal scales is the dissipation of excess energy, through the non-photochemical quenching of chl a fluorescence that is catalyzed 4 by the xanthophyll cycle (Finazzi et al. 2006). This process involves enzymatic conversion from violaxanthin to antheraxanthin and zeaxanthin in plants and green algae (Gilmore et al. 1994, Masojidek et al. 1999) and from diadinoxanthin to diatoxanthin in chromophyte alge (Lavaud et al. 2002). Accumulation of zeaxanthin or diatoxanthin is triggered by the formation of a pH gradient across the thylakoid membrane (Demmig-Adams and Adams 2000). Much attention has been paid to the photoprotection mechanism in chromophyte algae (e.g Lavaud et al. 2004 and references therein, Harris et al. 2005), while few studies have dealt with marine green micro- algae (e.g. Gilmore and Yamamoto 2001, Garcia-Mendoza et al. 2002). The presumed minor contribution of green algae into the phytoplankton community, as well as the similarity of their xanthophyll cycle to the well-documented one found in terrestrial plants, (e.g. Havaux and Niyogi 1999, Demmig-Adams and Adams 2000) make the study of photoregulation in this group of low ecological interest. Recently, it has been shown that these algae are among the main picoeukaryote contributors in many ecosystems (Diez et al. 2004, Not et al. 2005), highlighting their capacity to adapt to different ecosystem characteristics and their probably relevant role in ecosystem structure and functioning. This study investigates the photophysiological properties of the strain RCC 237 belonging to the picoeukaryotic genus Picochlorum (Chlorophyta, Trebouxiophyceae). The short-term photoacclimative process is dissected in order to test the presence of an efficient acclimation to high photon flux density, through rapid xanthophyll cycle activation. Our assumption is based on the biological peculiarities of picoeukaryotes, e.g. low sinking rate and packaging effect (Raven 1998), that may lead this group to be more sensitive to light than large cells. This could be the case of the strain RCC 237 that was isolated from Mediterranean surface waters. Pigments, quenching of fluorescence and PSII efficiency were used as photoacclimative 5 indices during different light treatments and in presence or absence of enzymatic inhibitors linked to xanthophyll cycle activity. MATERIALS AND METHODS Algal model and culture conditions. The strain RCC 237 of Picochlorum (Chlorophyta, Trebouxiophyceae), isolated by Dr. D. Vaulot from the surface layer (20 m depth) of the Mediterranean Sea, was provided by the Roscoff Culture Collection (France; Vaulot et al. 2004). This small non-flagellated coccoid strain (diameter 1.5 µm) was cultivated non-axenically at 20° -2 -1 C under 40 µmol photons·m ·s (measured by a 4 π QSL-2100, Biospherical instruments INC, San Diego, USA) provided by one lamp (OSRAM, Decostar 51, 50 W; Munich, Germany) with a 12:12 light:dark photoperiod. Algae were grown in Keller medium (Keller et al. 1987) in 3-L glass cylinders and the cultures were continuously aerated and maintained in exponential phase by daily dilution of half of the culture with fresh medium during more than 10 days before the experiments. The pH and temperature were estimated daily with a HI- 9214-Stick pHmeter (Hanna Instruments, Woonsocket, USA) while cell concentration was controlled by flow cytometry (see below). Experimental design and sampling. The four experiments were conducted in triplicate aerated cultures at 20° C. Each culture flask was illuminated by one lamp (OSRAM, Decostar 51, 50 W; Munich, Germany), and the three lamps were mounted on a prototype device, called “PLIS” (“Progressive Light Increase System”) allowing gradual changes of PFD on the culture flasks, controlled by a BASIC program. A 3-L glass culture flask was maintained under the 6 initial conditions as an experimental control. During the four experiments, 30 mL of culture was sampled (see below) for HPLC-analyzed pigments, absorption spectrum on a filter by a spectrophotometer, cellular parameters by flow cytometry, quantum yield of fluorescence and rapid light curves (RLCs) by Phyto-Pam. Low light to high light experiment. The “PLIS” was setup as follows: after 30 minutes at 40 µmol photons·m-2·s-1, light was gradually increased to 200 µmol photons·m-2·s-1, over 60 min. -2 -1 For the following three hours, light remained constant at 200 µmol photons·m ·s and then -2 -1 increased to 400 µmol photons·m ·s over 30 min, remaining constant at this high light value for 2 hours. Frequency of sampling was high, especially during the two increasing light periods, with a total of 23 sampling points (Fig. 1a) High light to low light experiment. This experiment was conducted on cells acclimated at -2 -1 400 µmol photons·m ·s during 6 hours (i.e. the duration of the previous experiment) in order to study the relaxation of the photosynthetic apparatus under low light (40 µmol photons·m-2·s-1) during 3 hours. DTT addition experiment. After one hour of illumination at 40 µmol photons·m-2·s-1, the -1 DTT was injected in aqueous solution into the culture to a final concentration of 500 µmol·L (Lohr and Wilhelm 2001). Cells were incubated for 10 minutes with the inhibitor before the shift to high light (400 µmol photons·m-2·s-1). The control culture with no-addition of DTT followed the same light change as the three other flasks. 7 NF addition experiment. A methanolic solution of NF was injected into the culture flask -1 to a final concentration of 10 µmol·L methanol (2.5% v/v methanol; Garcia-Plazaola et al. 2002). Cells were incubated for 10 minutes with the inhibitor before being shifted to 400 µmol photons·m-2·s-1. It was previously verified that methanol (without NF) at this concentration has no effect on the algal photophysiology (data not shown). Pigment analysis. Samples of 10 mL were filtered onto GF/F glass-fiber filters (Whatman, Maidstone, UK) and immediately stored in liquid nitrogen until analysis. Using the method outlined in Casotti et al.
Recommended publications
  • The Arctic Picoeukaryote Micromonas Pusilla Benefits
    Biogeosciences Discuss., https://doi.org/10.5194/bg-2018-28 Manuscript under review for journal Biogeosciences Discussion started: 5 February 2018 c Author(s) 2018. CC BY 4.0 License. 1 The Arctic picoeukaryote Micromonas pusilla benefits 2 synergistically from warming and ocean acidification 3 4 Clara J. M. Hoppe1,2*, Clara M. Flintrop1,3 and Björn Rost1 5 6 1 Marine Biogeosciences, Alfred Wegener Institute – Helmholtz Centre for Polar and Marine 7 Research, 27570 Bremerhaven, Germany 8 2 Norwegian Polar Institute, 9296 Tromsø, Norway 9 3 MARUM, 28359 Bremen, Germany 10 11 *Correspondence to: Clara J. M. Hoppe ([email protected] 12 13 14 15 Abstract 16 In the Arctic Ocean, climate change effects such as warming and ocean acidification (OA) are 17 manifesting faster than in other regions. Yet, we are lacking a mechanistic understanding of the 18 interactive effects of these drivers on Arctic primary producers. In the current study, one of the 19 most abundant species of the Arctic Ocean, the prasinophyte Micromonas pusilla, was exposed 20 to a range of different pCO2 levels at two temperatures representing realistic scenarios for 21 current and future conditions. We observed that warming and OA synergistically increased 22 growth rates at intermediate to high pCO2 levels. Furthermore, elevated temperatures shifted 23 the pCO2-optimum of biomass production to higher levels. Based on changes in cellular 24 composition and photophysiology, we hypothesise that the observed synergies can be explained 25 by beneficial effects of warming on carbon fixation in combination with facilitated carbon 26 acquisition under OA. Our findings help to understand the higher abundances of picoeukaryotes 27 such as M.
    [Show full text]
  • 2018 Strassert JFH, Hehenberger E, Del Campo J, Okamoto N, Kolisko M
    2018 Strassert JFH, Hehenberger E, del Campo J, Okamoto N, Kolisko M, Richards TA, Worden AZ, Santoro AE & PJ Keeling. Phylogeny, evidence for a cryptic plastid, and distribution of Chytriodinium parasites (Dinophyceae) infecting copepods. Journal of Eukaryotic Microbiology. https://doi.org/10.1111/jeu.12701 Joo S, Wang MH, Lui G, Lee J, Barnas A, Kim E, Sudek S, Worden AZ & JH Lee. Common ancestry of heterodimerizing TALE homeobox transcription factors across Metazoa and Archaeplastida. BMC Biology. 16:136. doi: 10.1186/s12915-018-0605-5 Bachy C, Charlesworth CJ, Chan AM, Finke JF, Wong C-H, Wei C-L, Sudek S, Coleman ML, Suttle CA & AZ Worden. Transcriptional responses of the marine green alga Micromonas pusilla and an infecting prasinovirus under different phosphate conditions. Environmental Microbiology. Vol 20:2898-2912. Guo J, Wilken S, Jimenez V, Choi CJ, Ansong CK, Dannebaum R, Sudek L, Milner D, Bachy C, Reistetter EN, Elrod VA, Klimov D, Purvine SO, Wei C-L, Kunde-Ramamoorthy G, Richards TA, Goodenough U, Smith RD, Callister SJ & AZ Worden. Specialized proteomic responses and an ancient photoprotection mechanism sustain marine green algal growth during phosphate limitation. Nature Microbiology. Vol 3:781–790. Okamoto N, Gawryluk RMR, del Campo J, Strassert JFH, Lukeš J, Richards TA, Worden AZ, Santoro AE & PJ Keeling. A revised taxonomy of diplonemids Including the Eupelagonemidae n. fam. and a Type Species, Eupelagonema oceanica n. gen. & sp. The Journal of Eukaryotic Microbiology. https://doi.org/10.1111/jeu.12679 Orsi WD, Wilken S, del Campo J, Heger T, James E, Richards TA, Keeling PJ, Worden AZ & AE.
    [Show full text]
  • Spatial Variability of Picoeukaryotic Communities in the Mariana Trench Hongmei Jing1, Yue Zhang1,2, Yingdong Li3, Wenda Zhu1,2 & Hongbin Liu 3
    www.nature.com/scientificreports OPEN Spatial Variability of Picoeukaryotic Communities in the Mariana Trench Hongmei Jing1, Yue Zhang1,2, Yingdong Li3, Wenda Zhu1,2 & Hongbin Liu 3 Picoeukaryotes play prominent roles in the biogeochemical cycles in marine ecosystems. However, their Received: 14 June 2018 molecular diversity studies have been confned in marine surface waters or shallow coastal sediments. Accepted: 5 October 2018 Here, we investigated the diversity and metabolic activity of picoeukaryotic communities at depths Published: xx xx xxxx ranging from the surface to the abyssopelagic zone in the western Pacifc Ocean above the north and south slopes of the Mariana Trench. This was achieved by amplifying and sequencing the V4 region of both 18S ribosomal DNA and cDNA using Illumina HiSeq sequencing. Our study revealed: (1) Four super-groups (i.e., Alveolata, Opisthokonta, Rhizaria and Stramenopiles) dominated the picoeukaryote assemblages through the water column, although they accounted for diferent proportions at DNA and cDNA levels. Our data expand the deep-sea assemblages from current bathypelagic to abyssopelagic zones. (2) Using the cDNA-DNA ratio as a proxy of relative metabolic activity, the highest activity for most subgroups was usually found in the mesopelagic zone; and (3) Population shift along the vertical scale was more prominent than that on the horizontal diferences, which might be explained by the sharp physicochemical gradients along the water depths. Overall, our study provides a better understanding of the diversity and metabolic activity of picoeukaryotes in water columns of the deep ocean in response to varying environmental conditions. Marine picoeukaryotes, (i.e., picoplanktonic eukaryotes of <2 μm in size), are capable of photosynthetic, hetero- trophic and mixotrophic metabolisms1.
    [Show full text]
  • Rhythmicity of Coastal Marine Picoeukaryotes, Bacteria and Archaea Despite Irregular Environmental Perturbations
    Rhythmicity of coastal marine picoeukaryotes, bacteria and archaea despite irregular environmental perturbations Stefan Lambert, Margot Tragin, Jean-Claude Lozano, Jean-François Ghiglione, Daniel Vaulot, François-Yves Bouget, Pierre Galand To cite this version: Stefan Lambert, Margot Tragin, Jean-Claude Lozano, Jean-François Ghiglione, Daniel Vaulot, et al.. Rhythmicity of coastal marine picoeukaryotes, bacteria and archaea despite irregular environmental perturbations. ISME Journal, Nature Publishing Group, 2019, 13 (2), pp.388-401. 10.1038/s41396- 018-0281-z. hal-02326251 HAL Id: hal-02326251 https://hal.archives-ouvertes.fr/hal-02326251 Submitted on 19 Nov 2020 HAL is a multi-disciplinary open access L’archive ouverte pluridisciplinaire HAL, est archive for the deposit and dissemination of sci- destinée au dépôt et à la diffusion de documents entific research documents, whether they are pub- scientifiques de niveau recherche, publiés ou non, lished or not. The documents may come from émanant des établissements d’enseignement et de teaching and research institutions in France or recherche français ou étrangers, des laboratoires abroad, or from public or private research centers. publics ou privés. Rhythmicity of coastal marine picoeukaryotes, bacteria and archaea despite irregular environmental perturbations Stefan Lambert, Margot Tragin, Jean-Claude Lozano, Jean-François Ghiglione, Daniel Vaulot, François-Yves Bouget, Pierre Galand To cite this version: Stefan Lambert, Margot Tragin, Jean-Claude Lozano, Jean-François Ghiglione, Daniel
    [Show full text]
  • Assessing the Role of Dust Deposition on Phytoplankton Ecophysiology
    Discussion Paper | Discussion Paper | Discussion Paper | Discussion Paper | Biogeosciences Discuss., 9, 19199–19243, 2012 www.biogeosciences-discuss.net/9/19199/2012/ Biogeosciences doi:10.5194/bgd-9-19199-2012 Discussions BGD © Author(s) 2012. CC Attribution 3.0 License. 9, 19199–19243, 2012 This discussion paper is/has been under review for the journal Biogeosciences (BG). Assessing the role of Please refer to the corresponding final paper in BG if available. dust deposition on phytoplankton Assessing the role of dust deposition on ecophysiology phytoplankton ecophysiology and V. Giovagnetti et al. succession in a low-nutrient Title Page low-chlorophyll ecosystem: a mesocosm Abstract Introduction experiment in the Mediterranean Sea Conclusions References Tables Figures V. Giovagnetti1, C. Brunet1, F. Conversano1, F. Tramontano1, I. Obernosterer2,3, C. Ridame4, and C. Guieu5,6 J I 1Stazione Zoologica Anton Dohrn, Villa Comunale, 80121, Naples, Italy 2Universite´ Pierre et Marie Curie-Paris 6, UMR 7621, LOMIC, Observatoire Oceanologique,´ J I F-66650 Banyuls/Mer, France Back Close 3CNRS, UMR 7621, LOMIC, Observatoire Oceanologique,´ 66650 Banyuls/Mer, France 4Laboratoire d’Oceanographie´ et du Climat: Experimentations´ et Approches Numeriques´ Full Screen / Esc (LOCEAN), CNRS-Universite´ Paris VI, Campus Jussieu, Paris, France 5 Laboratoire d’Oceanographie´ de Villefranche/Mer, CNRS-INSU, UMR7093, Observatoire Printer-friendly Version Oceanologique,´ 06230, Villefranche/Mer, France 6 Universite´ Pierre et Marie Curie-Paris 6, UMR 7093, LOV, Observatoire Oceanologique,´ Interactive Discussion 06230, Villefranche/Mer, France 19199 Discussion Paper | Discussion Paper | Discussion Paper | Discussion Paper | Received: 30 November 2012 – Accepted: 5 December 2012 – Published: 21 December 2012 Correspondence to: C. Brunet ([email protected]) BGD Published by Copernicus Publications on behalf of the European Geosciences Union.
    [Show full text]
  • Genetic Tool Development in Marine Protists: Emerging Model Organisms for Experimental Cell Biology
    RESOURCE https://doi.org/10.1038/s41592-020-0796-x Genetic tool development in marine protists: emerging model organisms for experimental cell biology Diverse microbial ecosystems underpin life in the sea. Among these microbes are many unicellular eukaryotes that span the diversity of the eukaryotic tree of life. However, genetic tractability has been limited to a few species, which do not represent eukaryotic diversity or environmentally relevant taxa. Here, we report on the development of genetic tools in a range of pro- tists primarily from marine environments. We present evidence for foreign DNA delivery and expression in 13 species never before transformed and for advancement of tools for eight other species, as well as potential reasons for why transformation of yet another 17 species tested was not achieved. Our resource in genetic manipulation will provide insights into the ancestral eukaryotic lifeforms, general eukaryote cell biology, protein diversification and the evolution of cellular pathways. he ocean represents the largest continuous planetary ecosys- Results tem, hosting an enormous variety of organisms, which include Overview of taxa in the EMS initiative. Taxa were selected from Tmicroscopic biota such as unicellular eukaryotes (protists). multiple eukaryotic supergroups1,7 to maximize the potential of cel- Despite their small size, protists play key roles in marine biogeo- lular biology and to evaluate the numerous unigenes with unknown chemical cycles and harbor tremendous evolutionary diversity1,2. functions found in marine protists (Fig. 1). Before the EMS initia- Notwithstanding their significance for understanding the evolution tive, reproducible transformation of marine protists was limited to of life on Earth and their role in marine food webs, as well as driv- only a few species such as Thalassiosira pseudonana, Phaeodactylum ing biogeochemical cycles to maintain habitability, little is known tricornutum and Ostreococcus tauri (Supplementary Table 1).
    [Show full text]
  • Factors Controlling the Community Structure of Picoplankton in Contrasting Marine Environments
    Biogeosciences, 15, 6199–6220, 2018 https://doi.org/10.5194/bg-15-6199-2018 © Author(s) 2018. This work is distributed under the Creative Commons Attribution 4.0 License. Factors controlling the community structure of picoplankton in contrasting marine environments Jose Luis Otero-Ferrer1, Pedro Cermeño2, Antonio Bode6, Bieito Fernández-Castro1,3, Josep M. Gasol2,5, Xosé Anxelu G. Morán4, Emilio Marañon1, Victor Moreira-Coello1, Marta M. Varela6, Marina Villamaña1, and Beatriz Mouriño-Carballido1 1Departamento de Ecoloxía e Bioloxía Animal, Universidade de Vigo, Vigo, Spain 2Institut de Ciències del Mar, Consejo Superior de Investigaciones Científicas, Barcelona, Spain 3Departamento de Oceanografía, Instituto de investigacións Mariñas (IIM-CSIC), Vigo, Spain 4King Abdullah University of Science and Technology (KAUST), Read Sea Research Center, Biological and Environmental Sciences and Engineering Division, Thuwal, Saudi Arabia 5Centre for Marine Ecosystem Research, School of Sciences, Edith Cowan University, WA, Perth, Australia 6Centro Oceanográfico de A Coruña, Instituto Español de Oceanografía (IEO), A Coruña, Spain Correspondence: Jose Luis Otero-Ferrer ([email protected]) Received: 27 April 2018 – Discussion started: 4 June 2018 Revised: 4 October 2018 – Accepted: 10 October 2018 – Published: 26 October 2018 Abstract. The effect of inorganic nutrients on planktonic as- played a significant role. Nitrate supply was the only fac- semblages has traditionally relied on concentrations rather tor that allowed the distinction among the ecological
    [Show full text]
  • Spacial Variability in Plankton Size Structure and Community Composition Along Biogeochemical Gradients in the Pacific Ocean
    UNIVERSITY OF HAWAII LIBRARY SPACIAL VARIABILITY IN PLANKTON SIZE STRUCTURE AND COMMUNITY COMPOSITION ALONG BIOGEOCHEMICAL GRADIENTS IN THE PACIFIC OCEAN A TIIESIS SUBMIITED TO THE GRADUATE DIVISION OF THE UNIVERSITY OF HAWAI'! IN PARTIAL FULFILLMENT OF THE REQUIREMENTS FOR THE DEGREE OF MASTER OF SCIENCE IN OCEANOGRAPHY AUGUST 2007 By Tara M. Clemente Thesis Committee: David M. Karl, Chairperson Matthew J. Church Karin M. Bjorkman We certify that we have read this thesis and that, in our opinion, it is satisfactory in scope and quality as a thesis for the degree of Master of Science in Oceanography. ACKNOWLEDGEMENTS I would like to thank my committee members for their time, encouragement, support and advice. My primary advisor, Dave Karl, who has challenged me to think critically and guided me throughout this study; Matt Church, for always leaving his door open and for giving me insight throughout this project; and Karin BjOrkman, who has been instrumental throughout this entire project especially in both the field and lab. I would like to thank the members of the HOT team for all their support and for their friendships. I'd like to thank the officers and crew of the RfV Kilo Moana for providing a safe and comfortable work place. Thanks to all the BEACH-BASH participants for their hard work and assistance with sample collection and data analysis, in particular Chief Scientist Karin BjOrkman, Eric Grabowski and Dan Sadler. For help in analysis I wish to acknowledge Bob Bidigare and Stephanie Christensen for HPLC, Karin BjOrkman, Susan Curless and Claire Mahaffey for dissolved nutrients and Karen Selph for flow cytometry.
    [Show full text]
  • Dynamics and Functional Diversity of the Smallest
    Dynamics and functional diversity of the smallest phytoplankton on the Northeast US Shelf Bethany L. Fowlera,1 , Michael G. Neuberta,b , Kristen R. Hunter-Ceverac , Robert J. Olsona, Alexi Shalapyonoka, Andrew R. Solowb , and Heidi M. Sosika,1 aBiology Department, Woods Hole Oceanographic Institution, Woods Hole, MA 02543; bMarine Policy Center, Woods Hole Oceanographic Institution, Woods Hole, MA 02543; and cJosephine Bay Paul Center, Marine Biological Laboratory, Woods Hole, MA 02543 Edited by Tom M. Fenchel, University of Copenhagen, Helsingor, Denmark, and approved April 9, 2020 (received for review October 22, 2019) Picophytoplankton are the most abundant primary producers We adapted the model described in Hunter-Cevera et al. in the ocean. Knowledge of their community dynamics is key (6) in order to apply it to the assemblage of small eukary- to understanding their role in marine food webs and global otes present at the Martha’s Vineyard Coastal Observatory biogeochemical cycles. To this end, we analyzed a 16-y time (MVCO; 41◦ 19.5000 N, 70◦ 34.00 W). These eukaryotes can series of observations of a phytoplankton community at a be identified with flow cytometry based on their individual nearshore site on the Northeast US Shelf. We used a size- cell traits, including pigmentation and size. Traditionally, only structured population model to estimate in situ division rates cells with diameters less than 2 µm are considered picoplank- for the picoeukaryote assemblage and compared the dynamics ton. Imposing this arbitrary threshold on our data, however, with those of the picocyanobacteria Synechococcus at the same would exclude the tail of the observed size distribution at times location.
    [Show full text]
  • Ecotype Diversity in the Marine Picoeukaryote Ostreococcus (Chlorophyta, Prasinophyceae)
    Blackwell Science, LtdOxford, UKEMIEnvironmental Microbiology 1462-2912Blackwell Publishing Ltd, 200476853859Original ArticleEcotype diversity in the picoeukaryote OstreococusF. Rodríguez et al. Environmental Microbiology (2005) 7(6), 853–859 doi:10.1111/j.1462-2920.2005.00758.x Ecotype diversity in the marine picoeukaryote Ostreococcus (Chlorophyta, Prasinophyceae) Francisco Rodríguez,1 Evelyne Derelle,2 significant role in biogeochemical processes, primary Laure Guillou,1 Florence Le Gall,1 Daniel Vaulot1 and productivity and food webs especially in oligotrophic Hervé Moreau2* areas, where it accounts typically for up to 80% of the 1Station Biologique, UMR 7127 CNRS/INSU/UPMC, BP autotrophic biomass (Campbell et al., 1994; Li, 1994; 74, 29682 Roscoff, France. Rocap et al., 2002). Over the past two decades, a large 2Laboratoire Arago, UMR 7628 CNRS/UPMC, BP44, body of knowledge has accumulated on the diversity and 66651, Banyuls-sur-mer, France. ecophysiology of the cyanobacterium Prochlorococcus (Partensky et al., 1999; Rocap et al., 2003). In particular, part of its global success has been attributed to the exist- Summary ence of distinct low- and high-light ecotypes, occupying The importance of the cyanobacteria Prochlorococ- different niches and exploiting different resources (Rocap cus and Synechococcus in marine ecosystems in et al., 2003). terms of abundance and primary production can be Picoeukaryotic cells have been initially detected by their partially explained by ecotypic differentiation. Despite characteristic flow cytometry and pigment signatures over the dominance of eukaryotes within photosynthetic large geographical and vertical scales (Andersen et al., picoplankton in many areas a similar differentiation 1996). However, the genetic and physiological traits that has never been evidenced for these organisms.
    [Show full text]
  • Analysis of Photosynthetic Picoeukaryote Community Structure Along an Extended Ellett Line Transect in the Northern North Atlant
    Deep-Sea Research I 58 (2011) 733–744 Contents lists available at ScienceDirect Deep-Sea Research I journal homepage: www.elsevier.com/locate/dsri Analysis of photosynthetic picoeukaryote community structure along an extended Ellett Line transect in the northern North Atlantic reveals a dominance of novel prymnesiophyte and prasinophyte phylotypes Amy R. Kirkham a,1, Ludwig E. Jardillier a,b, Ross Holland c, Mikhail V. Zubkov c, Dave J. Scanlan a,n a School of Life Sciences, University of Warwick, Coventry CV4 7AL, UK b Unite´ d’Ecologie, Syste´matique et Evolution, UMR CNRS 8079, Univ. Paris-Sud, France c National Oceanography Centre, Southampton, Hampshire SO14 3ZH, UK article info abstract Article history: Photosynthetic picoeukaryotes (PPEs) of a size o3 mm can contribute significantly to primary Received 6 December 2010 production. Here, PPE community structure was analysed along an extended Ellett Line transect, an Received in revised form area in the North Atlantic well studied by physical oceanographers but largely neglected in the field of 3 May 2011 microalgal ecology. Distribution patterns of specific PPE classes were determined using dot-blot Accepted 10 May 2011 hybridization analysis, while the taxonomic composition of specific PPE classes was revealed by Available online 20 May 2011 phylogenetic analysis of plastid 16S rRNA gene sequences. In addition, we performed fluorescent Keywords: in situ hybridization (FISH) analysis of seawater samples collected along the transect to provide a Photosynthetic picoeukaryotes PCR-independent survey of class level PPE distribution patterns. We found the PPE community was Community structure dominated by members of the Prymnesiophyceae, Prasinophyceae and Mamiellophyceae.
    [Show full text]
  • Marine Primary Producers
    Marine Primary Producers Macroalage & Phytoplankton Photo: C. Schvarcz (Steward Lab, UH Manoa) OCN 201 Biology Lecture 4 http://video.conncoll.edu/f/pasiv/lucid/Cyanophora-900.html Thursday, November 13, 2014 Primary production • The production of organic compounds from atmospheric or aquatic carbon dioxide, principally through the process of photosynthesis (or chemosynthesis) • Carried out by autotrophs • On land primary producers are mostly macroscopic • In the sea nearly all primary production is due to microscopic phytoplankton Thursday, November 13, 2014 Terrestrial Primary Producers Large Marine Primary Producers Macroalgae & Seagrasses Thursday, November 13, 2014 Kelp Forest Locations Macroalgae mostly limited to coastal areas Exception: Sargassum, a planktonic macroalga Thursday, November 13, 2014 BUT: most life in the sea is microscopic including the primary producers and consumers Picoeukaryote Bacterium Large Flagellate Diatom Thursday, November 13, 2014 How many phytoplankton in a liter of seawater? Bigger Diatoms 1,000 Dinoflagellates 10,000 Coccolithophores 20,000 Nanoflagellates 1,000,000 Smaller Cyanobacteria 100,000,000 very rough numbers; they vary a lot! Thursday, November 13, 2014 Prokaryotic Phytoplankton (Cyanobacteria) • Prochlorococcus • Synechococcus (and others) Responsible for a lot of the primary productivity in the open ocean Thursday, November 13, 2014 Eukaryotic Phytoplankton have Plastids that originated as symbiotic cyanobacteria Thursday, November 13, 2014 Some Eukaryotes Steal Plastids from Others This
    [Show full text]