515 Million Years of Structural Colour
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Anchialine Cave Biology in the Era of Speleogenomics Jorge L
International Journal of Speleology 45 (2) 149-170 Tampa, FL (USA) May 2016 Available online at scholarcommons.usf.edu/ijs International Journal of Speleology Off icial Journal of Union Internationale de Spéléologie Life in the Underworld: Anchialine cave biology in the era of speleogenomics Jorge L. Pérez-Moreno1*, Thomas M. Iliffe2, and Heather D. Bracken-Grissom1 1Department of Biological Sciences, Florida International University, Biscayne Bay Campus, North Miami FL 33181, USA 2Department of Marine Biology, Texas A&M University at Galveston, Galveston, TX 77553, USA Abstract: Anchialine caves contain haline bodies of water with underground connections to the ocean and limited exposure to open air. Despite being found on islands and peninsular coastlines around the world, the isolation of anchialine systems has facilitated the evolution of high levels of endemism among their inhabitants. The unique characteristics of anchialine caves and of their predominantly crustacean biodiversity nominate them as particularly interesting study subjects for evolutionary biology. However, there is presently a distinct scarcity of modern molecular methods being employed in the study of anchialine cave ecosystems. The use of current and emerging molecular techniques, e.g., next-generation sequencing (NGS), bestows an exceptional opportunity to answer a variety of long-standing questions pertaining to the realms of speciation, biogeography, population genetics, and evolution, as well as the emergence of extraordinary morphological and physiological adaptations to these unique environments. The integration of NGS methodologies with traditional taxonomic and ecological methods will help elucidate the unique characteristics and evolutionary history of anchialine cave fauna, and thus the significance of their conservation in face of current and future anthropogenic threats. -
Diffractive Properties of Blue Morpho Butterfly Wings
Diffractive Properties of Blue Morpho Butterfly Wings Mary Lalak and Paul Brackman Department of Physics and Astronomy, University of Georgia, Athens, Georgia 30602 (Dated: October 24, 2014) Many species of butterflies are known to produce beautiful iridescent colors when exposed to light from different angles. These affects can be attributed to a few different optical phenomena combined, the most prominent being reflective diffraction. Using common household items and with a budget of 50 dollars, we attempt to confirm the theory that the collection of ridges on the individual scales on the wing act as transmission gratings, as well as reflective. These results are quantified by the calculation of the ridge separation and comparing this distance to those observed by a scanning electron microscope photo. I. INTRODUCTION In studying the optical property of iridescence, three distinct mechanisms must be discussed. Thin film inter- ference, structured coloring, and reflective diffraction all contribute to the iridescent qualities of a surface. Thin film interference occurs when light strikes a film, some of it enters the film, and the rest is reflected off. The light transmitted through reflects off the bottom of the film and exits the film to interfere with the light that FIG. 1: Up-Close View of Scales from an Optical Microscope originally reflected off the surface of the film. This inter- ference pattern causes a spectrum of color to be visible from white light. Examples of thin film interference in- clude oil slicks and soap bubbles. Structural coloring oc- curs when the structure of the object itself (with various reflective surfaces) produces an interference resulting in vibrant colors. -
Ostracoda an Introduction.Pdf
The Ostracoda (from Wikipedia, 5/5/2009: http://en.wikipedia.org/wiki/Ostracod) Ostracoda is a class of the Crustacea, sometimes known as the seed shrimp because of their appearance. Ostracods are small crustaceans, typically around one mm in size, but varying between 0.2 to 30 mm, laterally compressed and protected by a bivalve-like, chitinous or calcareous valve or "shell". The hinge of the two valves is in the upper, dorsal region of the body. Some 65,000 species (13,000 of which are extant taxa) have been identified, grouped into several orders. This group may not be monophyletic. Ostracod taxa are grouped into a Class based on gross morphology. Ecologically, marine ostracods can be part of the zooplankton or (most commonly) they are part of the benthos, living on or inside the upper layer of the sea floor. Many ostracods, especially the Podocopida, are also found in fresh water and some are known from humid continental forest soils. The body consists of a cephalon (head), separated from the thorax by a slight constriction. The segmentation is unclear. The abdomen is regressed or absent whereas the adult gonads are relatively large. There are 5–8 pairs of appendages. The branchial plates are responsible for oxygenation. The epidermal cells may also secrete calcium carbonate after the chitinous layer is formed, resulting in a chalk layer enveloped by chitin. This calcification is not equally pronounced in all orders. During every instar transition, the old carapace (chitinous and calcified) is rejected and a new, larger is formed and calcified. The outer lamella calcifies completely, while the inner lamella calcifies partially, with the rest remaining chitinous. -
Spatial Restriction of Light Adaptation Inactivation in Fly Photoreceptors and Mutation-Induced
The Journal of Neuroscience, April 1991, 7 f(4): 900-909 Spatial Restriction of Light Adaptation and Mutation-Induced Inactivation in Fly Photoreceptors Baruch Minke and Richard Payne” Department of Neuroscience, The Howard Hughes Medical Institute, The Johns Hopkins University School of Medicine, Baltimore, Maryland 21205 The spatial spread within fly photoreceptors of 2 forms of We describe simple preparations of the retinas of the housefly, desensitization by bright light have been investigated: the Musca domestica, and the sheepblowfly, Lucilia cuprina, that natural process of light adaptation in normal Musca photo- allow recording from individual ommatidia in vitro, using a receptors and a receptor-potential inactivation in the no- suction pipette similar to that used to record from rod photo- steady-state (nss) mutant of the sheep blowfly Lucilia. The receptors of the vertebrate retina (Baylor et al., 1979; for a suction-electrode method used for recording from verte- preliminary use of this method, see also Becker et al., 1987). brate rods was applied to fly ommatidia. A single ommatid- The suction-electrode method has 2 advantages when applied ium in vitro was partially sucked into a recording pipette. to fly photoreceptors. First, the method might prove to be more Illumination of the portion of the ommatidium within the pi- convenient than the use of intracellular microelectrodes when pette resulted in a flow of current having a wave form similar recording from small photoreceptors, such as those of Drosoph- to that of the receptor potential and polarity consistent with ila. Recordings from Drosophila are needed to perform func- current flow into the illuminated region of the photorecep- tional tests on mutant flies. -
The North American Ostracod Eusarsiella Zostericola (Cushman, 1906) Arrives in Mainland Europe
BioInvasions Records (2013) Volume 2, Issue 1: 47–50 Open Access doi: http://dx.doi.org/10.3391/bir.2013.2.1.08 © 2013 The Author(s). Journal compilation © 2013 REABIC Short Communication The North American ostracod Eusarsiella zostericola (Cushman, 1906) arrives in mainland Europe Marco Faasse1,2 1 eCOAST Marine Research, PO Box 149, 4330 AC Middelburg, The Netherlands 2 Naturalis Biodiversity Center, Department of Marine Zoology, PO Box 9517, 2300 RA Leiden, The Netherlands E-mail: [email protected] Received: 3 October 2012 / Accepted: 14 November 2012 / Published online: 16 November 2012 Handling editor: Vadim Panov Abstract In sediment samples collected in the Oosterschelde, a marine embayment in the southwest of The Netherlands (southern North Sea), nine specimens of a non-native myodocopid ostracod were found. The ostracods were identifed as the North American species Eusarsiella zostericola (Cushman, 1906), previously introduced to southeastern England, probably with imported American oysters. Key words: introduction; shellfish; Myodocopida; The Netherlands ostracods of the order Myodocopida from The Introduction Netherlands. They do not belong to any of the native species known from the North Sea area. At least three species introduced to southeast Their similarity to a species introduced to England with oysters from North America have England with oysters from North America was subsequently been recorded from The Nether- immediately evident and this was checked with lands. The American slipper limpet Crepidula the pertinent literature. fornicata (L., 1758) and the American piddock Petricolaria pholadiformis (Lamarck, 1818) Material and methods arrived in The Netherlands, possibly with shellfish imports from England (Wolff 2005), Samples were taken in the southwest delta area and the American oyster drill Urosalpinx cinerea of The Netherlands, on the eastern shore of the (Say, 1822) almost certainly did so (Faasse and Southern Bight of the North Sea. -
Evolutionary Biology and Ecology of Ostracoda
Evolutionary Biology and Ecology of Ostracoda ~1997 Developments in Hydrobiology 148 Series editor H. J. Dumont Fifteen papers presented under Theme 3 of the 13th International Symposium on Ostracoda (IS097), held at the University of Greenwich, Medway Campus, U.K., from 27 to 31 July, 1997. The conference organizers were David J. Horne and Ian Slipper (University of Greenwich), Alan Lord (University Col lege London), Ian Boomer (University of East Anglia1) and Jonathan Holmes (Kingston University). 1 Present address: University of Newcastle. Evolutionary Biology and Ecology of Ostracoda Theme 3 of the 13th International Symposium on Ostracoda (18097) Edited by David J. Horne & Koen Martens Reprinted from Hydrobio/ogia, volume 419 (2000) Springer-Science+Business Media, B.V. Library of Congress Cataloging-in-Publication Data A C.I.P. Catalogue record for this book is available from the Library of Congress. ISBN 978-90-481-5499-9 ISBN 978-94-017-1508-9 (eBook) DOI 10.1007/978-94-017-1508-9 Printed an acid-free paper AII Rights reserved © 2000 Springer Science+Business Media Dordrecht Originally published by Kluwer Academic Publishers in 2000 Softcover reprint of the hardcover 1st edition 2000 No part of the material protected by this copyright notice may be reproduced or utilized in any form or by any means, electronic or mechanical, including photocopying, record ing or by any information storage and retrieval system, without written permission from the copyright owner. v Contents Preface Ostracoda and the four pillars of evolutionary wisdom K. Martens, D. J. Home Vll-Xl Keynote Paper Open qm~stions in evolutionary ecology: do ostracods have the answers? R.K. -
Syncarid Crustaceans from the Montceau Lagersta¨Tte
[Palaeontology, Vol. 49, Part 3, 2006, pp. 647–672] SYNCARID CRUSTACEANS FROM THE MONTCEAU LAGERSTA¨ TTE (UPPER CARBONIFEROUS; FRANCE) by VINCENT PERRIER*, JEAN VANNIER*, PATRICK R. RACHEBOEUF , SYLVAIN CHARBONNIER*, DOMINIQUE CHABARDà and DANIEL SOTTYà *Universite´ Claude Bernard Lyon 1, UMR 5125 PEPS ‘Pale´oenvironnements et Pale´obiosphe`re’, Campus scientifique de la Doua, Baˆtiment Ge´ode, 2 rue Raphae¨l Dubois, 69622 Villeurbanne, France; e-mails: [email protected]; [email protected] Universite´ de Bretagne Occidentale, UMR 6538 ‘Domaines Oce´aniques’ – Pale´ontologie, UFR Sciences et Techniques, 6 avenue Le Gorgeu, CS 93837, F-29238 Brest cedex 3, France; e-mail: [email protected] àMuse´e d’Histoire Naturelle d’Autun, 14 rue St-Antoine, 71400 Autun, France Typescript received 28 September 2004; accepted in revised form 17 May 2005 Abstract: Key aspects of the morphology, autecology, sys- suggest a relatively low level of locomotory activity. The tematics and taphonomy of the crustacean syncarids from field of vision may have been large and panoramic (stalked the Montceau Lagersta¨tte (Upper Carboniferous, Stephanian eyes). Rows of pores on 12 trunk segments are interpreted B; France) are presented. Palaeocaris secretanae is the most as possible sensory organs used for current detection. abundant faunal element of the Montceau biota and shows Females were brooding eggs (clusters of eggs preserved striking morphological similarities with Palaeocaris typus along anteroventral trunk). Microprobe analysis indicates from the Mazon Creek Lagersta¨tte (Westphalian D; Illinois, that siderite is the major component of the nodules. Four USA). Palaeocaris secretanae was a shrimp-like animal with events played a key-role in the three-dimensional preserva- a short head (no head shield), large mandibles, 14 trunk tion of syncarids: (1) rapid burial, (2) minimal decomposi- segments (the first one being reduced) and a fan-like caudal tion, (3) phosphatic mineralization shortly after the termination. -
Iridescence in Cooked Venison – an Optical Phenomenon
Journal of Nutritional Health & Food Engineering Research Article Open Access Iridescence in cooked venison – an optical phenomenon Abstract Volume 8 Issue 2 - 2018 Iridescence in single myofibers from roast venison resembled multilayer interference in having multiple spectral peaks that were easily visible under water. The relationship HJ Swatland of iridescence to light scattering in roast venison was explored using the weighted- University of Guelph, Canada ordinate method of colorimetry. In iridescent myofibers, a reflectance ratio (400/700 nm) showing wavelength-dependent light scattering was correlated with HJ Swatland, Designation Professor CIE (Commission International de l’Éclairage) Y%, a measure of overall paleness Correspondence: Emeritus, University of Guelph, 33 Robinson Ave, Guelph, (r=0.48, P< 0.01). Hence, meat iridescence is an optical phenomenon. The underlying Ontario N1H 2Y8, Canada, Tel 519-821-7513, mechanism, subsurface multilayer interference, may be important for meat colorimetry. Email [email protected] venison, iridescence, interference, reflectance, meat color Keywords: Received: August 23, 2017 | Published: March 14, 2018 Introduction balanced pixel hues that have tricked your eyes to appear white; and when we perceive interference colors, complex interference spectra Iridescence is an enigmatic aspect of meat color with some practical trick our eyes again. As the order of interference increases, the colors 1–4 importance for consumers concerned about green colors in meat. appear to change from metallic -
Seeing Through Moving Eyes
bioRxiv preprint doi: https://doi.org/10.1101/083691; this version posted June 1, 2017. The copyright holder for this preprint (which was not certified by peer review) is the author/funder. All rights reserved. No reuse allowed without permission. 1 Seeing through moving eyes - microsaccadic information sampling provides 2 Drosophila hyperacute vision 3 4 Mikko Juusola1,2*‡, An Dau2‡, Zhuoyi Song2‡, Narendra Solanki2, Diana Rien1,2, David Jaciuch2, 5 Sidhartha Dongre2, Florence Blanchard2, Gonzalo G. de Polavieja3, Roger C. Hardie4 and Jouni 6 Takalo2 7 8 1National Key laboratory of Cognitive Neuroscience and Learning, Beijing, Beijing Normal 9 University, Beijing 100875, China 10 2Department of Biomedical Science, University of Sheffield, Sheffield S10 T2N, UK 11 3Champalimaud Neuroscience Programme, Champalimaud Center for the Unknown, Lisbon, 12 Portugal 13 4Department of Physiology Development and Neuroscience, Cambridge University, Cambridge CB2 14 3EG, UK 15 16 *Correspondence to: [email protected] 17 ‡ Equal contribution 18 19 Small fly eyes should not see fine image details. Because flies exhibit saccadic visual behaviors 20 and their compound eyes have relatively few ommatidia (sampling points), their photoreceptors 21 would be expected to generate blurry and coarse retinal images of the world. Here we 22 demonstrate that Drosophila see the world far better than predicted from the classic theories. 23 By using electrophysiological, optical and behavioral assays, we found that R1-R6 24 photoreceptors’ encoding capacity in time is maximized to fast high-contrast bursts, which 25 resemble their light input during saccadic behaviors. Whilst over space, R1-R6s resolve moving 26 objects at saccadic speeds beyond the predicted motion-blur-limit. -
Octopus Consciousness: the Role of Perceptual Richness
Review Octopus Consciousness: The Role of Perceptual Richness Jennifer Mather Department of Psychology, University of Lethbridge, Lethbridge, AB T1K 3M4, Canada; [email protected] Abstract: It is always difficult to even advance possible dimensions of consciousness, but Birch et al., 2020 have suggested four possible dimensions and this review discusses the first, perceptual richness, with relation to octopuses. They advance acuity, bandwidth, and categorization power as possible components. It is first necessary to realize that sensory richness does not automatically lead to perceptual richness and this capacity may not be accessed by consciousness. Octopuses do not discriminate light wavelength frequency (color) but rather its plane of polarization, a dimension that we do not understand. Their eyes are laterally placed on the head, leading to monocular vision and head movements that give a sequential rather than simultaneous view of items, possibly consciously planned. Details of control of the rich sensorimotor system of the arms, with 3/5 of the neurons of the nervous system, may normally not be accessed to the brain and thus to consciousness. The chromatophore-based skin appearance system is likely open loop, and not available to the octopus’ vision. Conversely, in a laboratory situation that is not ecologically valid for the octopus, learning about shapes and extents of visual figures was extensive and flexible, likely consciously planned. Similarly, octopuses’ local place in and navigation around space can be guided by light polarization plane and visual landmark location and is learned and monitored. The complex array of chemical cues delivered by water and on surfaces does not fit neatly into the components above and has barely been tested but might easily be described as perceptually rich. -
Vertical Distribution and Population Structure of the Three Dominant Planktonic Ostracods (Discoconchoecia Pseudodiscophora
Plankton Biol. Ecol. 49 (2): 66-74, 2002 plankton biology & ecology K> The Plankton Society of Japan 2002 Vertical distribution and population structure of the three dominant planktonic ostracods (Discoconchoecia pseudodiscophora, Orthoconchoecia haddoni and Metaconchoecia skogsbergi) in the Oyashio region, western North Pacific Hideki Kaeriyama & Tsutomu Ikeda Marine Biodiversity Laboratory, Graduate School of Fisheries Sciences, Hokkaido University, 3-1-1, Minato-cho, Hakodate, Hokkaido 041-0821, Japan Received 19 November 2001; accepted 4 April 2002 Abstract: Diel and seasonal vertical distribution and population structure of Discoconchoecia pseu- dodiscophora (Rudjakov), Orthoconchoecia haddoni (Brady & Norman) and Metaconchoecia skogs bergi (lies) were investigated in the Oyashio region during September 1996 through October 1997. Monthly samples were collected with 0.1 mm mesh closing nets hauled vertically through five con tiguous discrete depths between the surface and ~2000 m. D. pseudodiscophora occurred predomi nantly from the base of the thermocline to a depth of 500 m. O. haddoni and M. skogsbergi occurred somewhat deeper at depths of 250 to 1000 m, but were also moderately abundant below 1000 m. Sampling was undertaken both by day and by night during December 1996, April and October 1997 to assess diel vertical migration activity, but revealed no appreciable day/night differences in the ver tical distributions of the ostracods. All the instars sampled [instars II through VIII (adults) of D. pseu dodiscophora and O. haddoni, and instars III through VIII (adults) of M. skogsbergi] were collected throughout the entire period of the study. All three species showed evidence of ontogenetic vertical migration—the ranges of these migrations being from 300-1000 m in D. -
Proceedings Biological Society of Washington
Vol. 81, pp. 439-472 30 December 1968 PROCEEDINGS OF THE BIOLOGICAL SOCIETY OF WASHINGTON BATHYAL MYODOCOPID OSTRACODA FROM THE NORTHEASTERN GULF OF MEXICO BY LOUIS S. KORNJCKEB Smithsonian Institution, Washington, D. C. Myodocopid ostracods of the deeper waters of the Gulf of Mexico are virtually unknown . only 1 species, Cypridina fla- tus Tressler, 1949, having been previously reported from 1200 meters near Tortugas (Tressler, 1949, p. 336, p. 431). There- fore, I was quite pleased to receive from Dr. Willis E. Pequeg- nat and Mr. Thomas J. Bright a small collection containing myodocopid ostracods collected in a mid-water trawl that acci- dentally dragged along the bottom at a depth of 1000-1200 meters for 1.5 hours during the Texas A&M University cruise 66-A-9 of the R/V Alaminos on July 11, 1966. The Myodo- copida are described in the systematic part of this paper. Os- tracods in the sample are listed below: Order Myodocopida Suborder Myodocopina Superfamily Cypridinacea Tetragonodon rhamphodes new species 19 Paramekodon poidseni new species 19 Bathyvargula optilus new species 299,1 juv. Suborder Halocypridina Superfamily Halocypridacea Conchoecia atlantica (Lubbock) 2 9 9 Conchoecia valdimae Muller 2 9 9 Conchoecia macrocheira Muller 1 9 45—PROC. BIOL. SOC. WASH., VOL. 81, 1968 (439) 440 Proceedings of the Biological Society of Washington Order Poclocopida (ident. by Drs. R. H. Benson and R. F. Maddocks) Suborder Podocopina Bairdoppilata ?hirsuta (Brady) 19,4 MT shells Bairdia new species 29 9,9 MT shells. 2 single valves Echinocythereis echinata (Sars) 1 single valve Four specimens of bottom fish collected in the trawl con- tained ostracods in their stomachs or intestines: Nezumia hildebrandi (2 specimens), Dicrolene intronigra (1 specimen), and Dicromita agassizii (1 specimen).