Topics in Geobiology
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GTL PI Meeting 2003 Presentation Nealson
USCUSC Geobiology Astrobiology Ken Nealson Wrigley Professor of Geobiology USC SHEWANELLA and Genomes to Life !! THE FUTURE!! WHERE ARE WE GOING? HOW WILL WE GET THERE? WHAT ARE THE CHALLENGES AND TRAPS? USCUSC Geobiology Astrobiology Genomes to Life: Shewanella and the future !! Genomes & Genomics: For sake of this discussion, I include Genome composition, gene expression, & metabolism Genomics Physiology Ecophsyiology Ecology Predictable Community Behavior Successful Manipulation of Natural Communities USCUSC Geobiology Astrobiology Shewanella in the future: Short Term: Genomic/Proteomic/Metabolic Connections Linkage of physiology to genomic information Mid Term: Ecophysiology Questions regarding regulation of MR-1 How does the cell”work”? Linkage of laboratory to microcosm and field data Long Term: Community structure and activities Genetic variability and use of genomic approaches Predictable community ecology The “old view” of Shewanella oneidensis Gamma Purple proteobacteria MR-1; when Isolated was One of ~10, Now >50 ! USCUSC Geobiology Astrobiology The “new view” of Shewanella Now MR-1 is again one of 1, although a strain of S. benthica is almost finished by a Japanese group (JAMSTEC) USCUSC Geobiology Astrobiology Excitement of the “new view”: May be able to use this information to dissect specific aspects of both ecology and evolution: Ecology: Involved in many different redox processes Aerobic and anaerobic niches Metal cycling connected with carbon cycling Potential for dealing with many toxic metals and radionuclides Can we understand Shewanella well enough to begin to use it? what it does how it does it how it regulates how it interacts with other organisms All of this well enough to make predictions that work. -
50 Anni Di Friuli a Roma
Prima di copertina (dal basso in alto): Carnelutti, Desio, Moselli, Rubbia, Afro, Mirko, Angeli, Pasolini, Turoldo, Astaldi. Retro di copertina (dall’alto in basso): Tondo, Tessitori, Valerio, Toros, Leicht, Sartogo, Galanti, Zucchet, Girolami, Degano. Mostra Cinquant’anni di Friuli a Roma Una presenza dal 1945 Sotto l’Alto Patronato del Presidente della Repubblica ed il Patrocinio di: Senato della Repubblica Regione Autonoma Friuli Venezia Giulia Regione Lazio Comune di Roma Galleria “L’Agostiniana” Roma, piazza del Popolo, 12 11 aprile - 5 maggio 2002 Regione Autonoma Friuli Venezia Giulia Fogolâr Furlàn di Roma Friuli nel Mondo Realizzazione e stampa Arti Grafiche Friulane SpA Tavagnacco, Udine Regione Friuli Venezia Giulia Regione Lazio Comune di Roma Astaldi S.p.A. - Roma Generali - Assicurazioni Generali Banca Intesa - Milano Camera di Commercio, Industria, Artigianato e Agricoltura - Udine Cassa di Risparmio di Udine e Pordenone (CRUP) Faber S.p.A. - Cividale del Friuli Dal Fari - azienda agricola - Cividale del Friuli Telit Mobile Terminals S.p.A. - Trieste Consorzio Latterie Friulane Prosciutto di San Daniele Mostra “Cinquant’anni di Friuli a Roma” Comitato scientifico: Giovan Battista Altan, storico; Ugo Bari, generale; Giuseppe Bergamini, dir. Civici Musei Udine; Ferruccio Clavora, dir. Friuli nel Mondo; Antonio Clemente, giornalista; Fausto Corrubolo, maestro; Damiano Damiani, regista; Licio Damiani, critico; Ermes Disint, giornalista; Piero Fortuna, giornalista; Rodolfo Grasso, architetto; Luciano Pettoello Mantovani, docente; Bruno Martinis, Accademico dei Lincei; Carlo Mattiussi, ingegnere; Franco Mistretta, ministro; Carlo Mittoni, generale; Giuliana Morandini, scrittrice; Stanislao Nievo, scrittore; Piero Nigris, magistrato; Mario Padovan, critico; Leonardo Pascoletti, architetto; Gian Luigi Pezza, avvocato; Alberto Picotti, scrittore; Gianfranco Plenizio, maestro; Claudio Pighin, docente; Francesco Pittoni, ingegnere; Mario Quargnolo, critico; Isabella Reale, dir. -
Thoughts in Geobiology
Journal of Geology and Mining Research Vol. 1(8), October, 2009 Available online http://www.academicjournals.org/jgmr ISSN 2006 – 9766 © 2009 Academic Journals Editorial Thoughts in Geobiology One of the possible ways to make connection between geologists and biologists is through studying subjects related to the newly established trend “Geobiology”. In the year 1972, Sylvester-Bradley stated that the Earth sciences include not only geology, but the hybrid-sciences geophysics, geochemistry and geobiology, of which the most complex and least rigorous is geobiology. Kump (2008) simply defined geobiology as the field that has recently energized the life and Earth sciences as geologists and biologists bring new tools to collaborations addressing fundamental problems that transcend the disciplines. The book edited by Xiao and Kaufman (2007) includes a set of multidisciplinary reviews on the Neoproterozoic fossil record (animals, algae, acritarchs, protists, and trace fossils), evolutionary developmental biology of animals, molecular clock estimates of phylogenetic divergences, and Neoproterozoic chemostratigraphy and sedimentary geology. The editors of this book believe that these topics are of continuing interest to geoscientists and bioscientists who are intrigued by the deep history of the Earth and its inhabitants. Yildirim et al. (2008) believe that microbial systems in extreme environments and in the deep biosphere may be analogous to potential life on other planetary bodies and hence may be used to investigate the possibilities of extraterrestrial life. I would add that astrobiologists are working on this point through studying materials from Mars. Through geobiology we search for origins and evolution of life, atmosphere, hydrosphere, lithosphere and biosphere, reasons of mass extinctions, interactions between microbes and minerals, global changes, and other subjects of interest. -
Rowan C. Martindale Curriculum Vitae Associate Professor (Invertebrate Paleontology) at the University of Texas at Austin
ROWAN C. MARTINDALE CURRICULUM VITAE ASSOCIATE PROFESSOR (INVERTEBRATE PALEONTOLOGY) AT THE UNIVERSITY OF TEXAS AT AUSTIN Department of Geological Sciences E-mail: [email protected] Jackson School of Geosciences Website: www.jsg.utexas.edu/martindale/ 2275 Speedway Stop C9000 Orchid ID: 0000-0003-2681-083X Austin, TX 78712-1722 Phone: 512-475-6439 Office: JSG 3.216A RESEARCH INTERESTS The overarching theme of my work is the connection between Earth and life through time, more precisely, understanding ancient (Mesozoic and Cenozoic) ocean ecosystems and the evolutionary and environmental events that shaped them. My research is interdisciplinary, (paleontology, sedimentology, biology, geochemistry, and oceanography) and focuses on: extinctions and carbon cycle perturbation events (e.g., Oceanic Anoxic Events, acidification events); marine (paleo)ecology and reef systems; the evolution of reef builders (e.g., coral photosymbiosis); and exceptionally preserved fossil deposits (Lagerstätten). ACADEMIC APPOINTMENTS Associate Professor, University of Texas at Austin September 2020 to Present Assistant Professor, University of Texas at Austin August 2014 to August 2020 Postdoctoral Researcher, Harvard University August 2012 to July 2014 Department of Organismic and Evolutionary Biology; Mentor: Dr. Andrew H. Knoll. EDUCATION Doctorate, University of Southern California 2007 to 2012 Dissertation: “Paleoecology of Upper Triassic reef ecosystems and their demise at the Triassic-Jurassic extinction, a potential ocean acidification event”. Advisor: Dr. David J. Bottjer, degree conferred August 7th, 2012. Bachelor of Science Honors Degree, Queen’s University 2003 to 2007 Geology major with a general concentration in Biology (Geological Sciences Medal Winner). AWARDS AND RECOGNITION Awards During Tenure at UT Austin • 2019 National Science Foundation CAREER Award: Awarded to candidates who are judged to have the potential to serve as academic role models in research and education. -
Dornbos.Web.CV
Stephen Quinn Dornbos Associate Professor and Department Chair Department of Geosciences University of Wisconsin-Milwaukee Milwaukee, WI 53201-0413 Phone: (414) 229-6630 Fax: (414) 229-5452 E-mail: [email protected] http://uwm.edu/geosciences/people/dornbos-stephen/ EDUCATION 2003 Ph.D., Geological Sciences, University of Southern California, Los Angeles, CA. 1999 M.S., Geological Sciences, University of Southern California, Los Angeles, CA. 1997 B.A., Geology, The College of Wooster, Wooster, OH. ADDITIONAL EDUCATION 2002 University of Washington, Summer Marine Invertebrate Zoology Course, Friday Harbor Laboratories. 1997 Louisiana State University, Summer Field Geology Course. PROFESSIONAL EXPERIENCE 2017-Present Department Chair, Department of Geosciences, University of Wisconsin-Milwaukee. 2010-Present Associate Professor, Department of Geosciences, University of Wisconsin-Milwaukee. 2004-2010 Assistant Professor, Department of Geosciences, University of Wisconsin-Milwaukee. 2012-Present Adjunct Curator, Geology Department, Milwaukee Public Museum. 2004-Present Curator, Greene Geological Museum, University of Wisconsin- Milwaukee. 2003-2004 Postdoctoral Research Fellow, Department of Earth Sciences, University of Southern California. 2002 Research Assistant, Invertebrate Paleontology Department, Natural History Museum of Los Angeles County. EDITORIAL POSITIONS 2017-Present Editorial Board, Heliyon. 2015-Present Board of Directors, Coquina Press. 2014-Present Commentaries Editor, Palaeontologia Electronica. 2006-Present Associate Editor, Palaeontologia Electronica. Curriculum Vitae – Stephen Q. Dornbos 2 RESEARCH INTERESTS 1) Evolution and preservation of early life on Earth. 2) Evolutionary paleoecology of early animals during the Cambrian radiation. 3) Geobiology of microbial structures in Precambrian–Cambrian sedimentary rocks. 4) Cambrian reef evolution, paleoecology, and extinction. 5) Exceptional fossil preservation. HONORS AND AWARDS 2013 UWM Authors Recognition Ceremony. 2011 Full Member, Sigma Xi. -
Bibliografia Di Ardito Desio
Bibliografia Di Ardito Desio 1 - La «Buse dal Diaul» presso Castel del Monte. "Mondo Sotterraneo", anno X, pag 95, Udine 1914. 2 - La Grotta del Paciuh (Stazione Neolitica nelle Prealpi Giulie). Ibid., anni XV-XVI (1919-20), pp. 25-30, 4 fig., Udine 1920. 3 - Fenomeni carsici sul M. Musi e sul M. Sarto Ibid., pp. 64-65, Udine 1920. 4 - Il turbine atmosferico del 30 agosto 1919 in Friuli. 'In Alto ", anno XXX/, pp. 8-14,2 fig., 1 tav., Udine agosto-dicembre 1920. 5 - Il Ghiacciaio del Montasio.Ibidem, anno XXXI, pp. 21-22, Udine agosto- dicembre 1920. 6 - La Creta del Bacino di Firenze. "Paleont. Italica", vol. XXXVI, pp. 189- 234,8 tav., 10 fig., Pisa 1920. 7 - Risultati sommari di uno studio sul Glaciale del Bacino della Fella e dell'Isonzo. Boll. Soc. Geol. Ital", vol. XXXIX (1920), fasc. 3, pp. CIX-CXII, Roma 1921. 8 - Osservazioni glaciologiche nelle Alpi Camiche e Giulie. "In Alto", anno XXXII, n. 1-3, pp. 1-10, Udine 1921. 9 - I Ghiacciai del Canin e del Montasio. (Osservazioni del 1921). Ibidem, anno XXXII, n. 4-6, pp. 54-69, 1 tav., Udine 1921. 10 - Su di una particolare forma di ghiacciai delle Alpi Venete. “Atti dell'VIII Congresso Geografico Italiano”, vol. II, pp. 42-46, 2 tav., 2 fig., Firenze 1921. 11- Carta della distribuzione delle industrie del Paleolitico inferiore e medio in Europa. Ibidem, vol. II, pp. 184-185, 1 fig., Firenze 1921. 12 - Su di una grotta della Val Saisera. "Mondo Sotterraneo", anni XVII-XVIII (1921-22), pp. -
Grotte DI INTERESSE PALEONTOLOGICO E PALETNOLOGICO in Friuli: Stato Delle Conoscenze E Risultati Preliminari Della Revisione Di Alcuni Materiali
GORTANIA. Geologia,GORTANIA Paleontologia, Paletnologia 38 (2016) Geologia, Paleontologia, Paletnologia 38 (2016) 85-120 Udine, 30.XI.2017 ISSN: 2038-0410 Paolo Maddaleni GROTTE DI INTERESSE PALEONTOLOGICO E PALETNOLOGICO IN FRIULI: STATO DELLE CONOSCENZE E RISULTATI PRELIMinaRI DELLA REVISIONE DI alcUni MATERIALI In ricordo di Adriano Del Fabbro CAVES OF PALEONTOLOgical and PALETNOLOgical (1936-2017), appassionato studioso INTEREST IN FRIULI (NE ITALY): STATE OF KNOWLEDGE and della preistoria delle grotte friulane PRELIMinaRY RESULTS OF THE REVISION OF SOME MATERials Riassunto breve - Grotte e ripari sotto roccia sono stati utilizzati dall’uomo sia come ricoveri di tipo stabile o temporaneo che come luoghi di difesa o di “culto”. Ambienti “chiusi”, per loro natura conservativi, essi appaiono caratterizzati da un elevato potenziale informativo ai fini della ricostruzione del popolamento, in senso diacronico, di un territorio. Il Friuli, per la sua conformazione e costituzione geologica, è ricco di fenomeni carsici: alcuni di questi, soprattutto nell’area prealpina, hanno dato vita a contesti insediativi di notevole interesse, variamente abitati almeno dal Paleolitico medio. I dati disponibili per tali contesti, spesso inediti, sono nella maggior parte dei casi frutto di ricerche datate compiute a partire dagli inizi del secolo scorso. Il loro inquadramento cronologico e culturale, in assenza di dati contestuali, può oggi basarsi sulla sola analisi tipolo- gica dei reperti recuperati, in particolare quelli ceramici e litici. Fanno eccezione il Riparo di Biarzo e la Grotta di Cladrecis (oggetto di scavo negli anni ’80 del secolo scorso) ed alcune cavità della pedemontana Pordenonese (ultimi decenni - in corso: Grotte del Rio Secco e del Clusantin), gli unici ad essere stati oggetto di scavo e studi post-scavo sistematici. -
Spontaneous Generation & Origin of Life Concepts from Antiquity to The
SIMB News News magazine of the Society for Industrial Microbiology and Biotechnology April/May/June 2019 V.69 N.2 • www.simbhq.org Spontaneous Generation & Origin of Life Concepts from Antiquity to the Present :ŽƵƌŶĂůŽĨ/ŶĚƵƐƚƌŝĂůDŝĐƌŽďŝŽůŽŐLJΘŝŽƚĞĐŚŶŽůŽŐLJ Impact Factor 3.103 The Journal of Industrial Microbiology and Biotechnology is an international journal which publishes papers in metabolic engineering & synthetic biology; biocatalysis; fermentation & cell culture; natural products discovery & biosynthesis; bioenergy/biofuels/biochemicals; environmental microbiology; biotechnology methods; applied genomics & systems biotechnology; and food biotechnology & probiotics Editor-in-Chief Ramon Gonzalez, University of South Florida, Tampa FL, USA Editors Special Issue ^LJŶƚŚĞƚŝĐŝŽůŽŐLJ; July 2018 S. Bagley, Michigan Tech, Houghton, MI, USA R. H. Baltz, CognoGen Biotech. Consult., Sarasota, FL, USA Impact Factor 3.500 T. W. Jeffries, University of Wisconsin, Madison, WI, USA 3.000 T. D. Leathers, USDA ARS, Peoria, IL, USA 2.500 M. J. López López, University of Almeria, Almeria, Spain C. D. Maranas, Pennsylvania State Univ., Univ. Park, PA, USA 2.000 2.505 2.439 2.745 2.810 3.103 S. Park, UNIST, Ulsan, Korea 1.500 J. L. Revuelta, University of Salamanca, Salamanca, Spain 1.000 B. Shen, Scripps Research Institute, Jupiter, FL, USA 500 D. K. Solaiman, USDA ARS, Wyndmoor, PA, USA Y. Tang, University of California, Los Angeles, CA, USA E. J. Vandamme, Ghent University, Ghent, Belgium H. Zhao, University of Illinois, Urbana, IL, USA 10 Most Cited Articles Published in 2016 (Data from Web of Science: October 15, 2018) Senior Author(s) Title Citations L. Katz, R. Baltz Natural product discovery: past, present, and future 103 Genetic manipulation of secondary metabolite biosynthesis for improved production in Streptomyces and R. -
Twelve Testable Hypotheses on the Geobiology of Weathering S
Geobiology (2011) DOI: 10.1111/j.1472-4669.2010.00264.x Twelve testable hypotheses on the geobiology of weathering S. L. BRANTLEY,1 J. P. MEGONIGAL,2 F. N. SCATENA,3 Z. BALOGH-BRUNSTAD,4 R. T. BARNES,5 M. A. BRUNS,6 P. VAN CAPPELLEN,7 K. DONTSOVA,8 H. E. HARTNETT,9 A. S. HARTSHORN,10 A. HEIMSATH,11 E. HERNDON,1 L. JIN,1 C. K. KELLER,12 J. R. LEAKE,13 W. H. MCDOWELL,14 F. C. MEINZER,15 T. J. MOZDZER,2 S. PETSCH,16 J. PETT-RIDGE,17 K. S. PREGITZER,18 P. A. RAYMOND,19 C. S. RIEBE,20 K. SHUMAKER,21 A. SUTTON-GRIER,2 R. WALTER22 AND K. YOO23 1Earth and Environmental Systems Institute, Pennsylvania State University, University Park, PA, USA 2Smithsonian Environmental Research Center, Edgewater, MD, USA 3Department of Earth and Environmental Science, University of Pennsylvania, Philadelphia, PA, USA 4Departments of Geology, Environmental Sciences and Chemistry, Hartwick College, Oneonta, NY, USA 5Department of Geological Sciences, University of Colorado, Boulder, CO, USA 6Department of Crop and Soil Sciences, Pennsylvania State University, University Park, PA, USA 7School of Earth and Atmospheric Sciences, Georgia Institute of Technology, Atlanta, GA, USA 8Biosphere 2 Earthscience, University of Arizona, Tucson, AZ, USA 9School of Earth and Space Exploration, and Department of Chemistry and Biochemistry, Arizona State University, Tempe, AZ, USA 10Department of Geology and Environmental Science, James Madison University, Harrisonburg, VA, USA 11School of Earth and Space Exploration, Arizona State University, Tempe, AZ, USA 12School of Earth and -
CURRENT TECHNOLOGY and RESOURCE NEEDS the Specific and Primary Agouronpurposes Are to Perform Research in the Sciences
The Agouron Institute GEOBIOLOGY CURRENT TECHNOLOGY and RESOURCE NEEDS The specific and primary AGOURONpurposes are to perform research in the sciences INSTITUTEand in mathematics, to disseminate the results obtained therefrom, all to benefit mankind. Cover photo: Phototrophic sulfur and non-sulfur bacteria in an enrichment from a microbial mat reveal part of the enormous diversity of microorganisms. © 2001 The Agouron Institute 45 GEOBIOLOGY CURRENT TECHNOLOGY and RESOURCE NEEDS The Agouron Institute INTRODUCTION 3 GEOBIOLOGY: 5 Current Research General Overview 5 Advances in Probing The Rock Record 6 Advances in Molecular Biology and Genomics 9 Current Research Directions 11 Questions of What and When: Detecting Life in the Geologic Record 12 Molecular Fossils 12 Morphological Fossils 14 Isotopic Signatures 16 Question of Who and How: Deciphering the Mechanisms of Evolution 18 Genetic Diversity 18 Microbial Physiology 20 Eukaryotic Systems 23 Experimental Paleogenetics 25 GEOBIOLOGY: Resource Needs 29 An Intensive Training Course in Geobiology 30 A Postdoctoral Fellowship Program in Geobiology 31 Support for Specific Research Projects 32 REFERENCES 34 2 Agouron Institute had expanded considerably and had obtained additional funding from the NSF and the NIH. A group of molecular biologists and chemists were collaborating to exploit new technology in which synthetic oligonucleotides were used to direct specific mutations in genes. A crystallography group had been INTRODUCTION formed and they were collaborating with the molecular biologists to study the properties of the altered proteins. These were among the very first applications of the new technology to form what is now the very ith the discovery of recombi- large field of protein engineering. -
Minor in Paleobiology
Minor in Paleobiology The minor in paleobiology is sponsored by the Department of Biology and is designed to provide students a solid foundation in the evolution and ecology of life in deep geologic time. In addition to classwork in paleontology, geobiology, astrobiology, and paleoanthropology, the minor provides opportunities for fieldwork and independent research. This is an excellent minor to accompany an Earth and Space Sciences, Biological Anthropology, or Biology major as a way of adding additional dimensions to your coursework and academic experience. Required courswork ____/30 cr 18 credits in the minor must be from outside your major. At least 15 credits must be completed at UW. ____ 3 cr. BIOL 354 (AUT and SPR) – Foundations in Evolution and Systematics ____ 1 cr. BIOL 483 – Senior Seminar in Paleobiology Choose one: ____ 5 cr. BIO A 388 - Human Fossils and Evolution ____ 5 cr. BIO A 488 - Primate Evolution ____ 5 cr. ARCHY 470 – The Archaeology of Extinction Complete at least two from this list: ____ 5 cr. BIOL 438 – Quant. Appr. to Paleobio, Morphology, and Systematics ____ 5 cr. BIOL 443 - Evolution of Mammals and Their Ancestors ____ 3/5 cr. BIOL 447 - Greening the Earth ____ 5 cr. BIOL 450/ESS 452 - Vertebrate Paleontology ____ 5 cr. BIOL/ESS 451 - Invertebrate Paleontology Complete at least one from this list: ____ 2 cr. ESS 100 - Dinosaurs ____ 3 cr. ESS 104 - Prehistoric Life ____ 5 cr. ESS 115 – Astrobiology: Life in the Universe ____ 5 cr. ESS 204 – Paleobiology and Geobiology of Mass Extinctions ____ 5 cr. ESS 213 – Evolution of the Earth Complete at least one from this list: ____ 5 cr. -
Muttoni+Kent-2019 RIPS Copy
Rivista Italiana di Paleontologia e Stratigrafa (Research in Paleontology and Stratigraphy) vol. 125(1): 249-269. March 2019 ADRIA AS PROMONTORY OF AFRICA AND ITS CONCEPTUAL ROLE IN THE TETHYS TWIST AND PANGEA B TO PANGEA A TRANSFORMATION IN THE PERMIAN GIOVANNI MUTTONI1* & DENNIS V. KENT2 1 *Corresponding author. Dipartimento di Scienze della Terra 'Ardito Desio', Università degli Studi di Milano, via Mangiagalli 34, I-20133 Milan, Italy. 2Earth and Planetary Sciences, Rutgers University, Piscataway, NJ 08854, USA, and Lamont-Doherty Earth Observatory of Columbia University, Palisades, NY 10964, USA.. To cite this article: Muttoni G. & Kent D.V. (2019) - Adria as promontory of Africa and its conceptual role in the Tethys Twist and Pangea B to Pangea A Transformation in the Permian. Riv. It. Paleontol. Strat., 125(1): 249-269. Keywords: Paleomagnetism; Adria; Pangea B; Pangea A. Abstract. It has been almost 60 years since the frst results from the Early Permian Bolzano Quartz Porphyries from the Trento Plateau of northern Italy (Southern Alps) showed paleomagnetic inclinations steeper than inclina- tions from broadly coeval units from central Europe. This experimental discrepancy, confrmed ever since at varying levels of magnitude and certitude, implied that northern Italy had paleolatitudes too northerly relative to Europe to be considered part of the European continent. On the other hand, it became progressively more apparent that paleo- magnetic data from northern Italy were more compatible with data from Africa than with data from Europe, and this observation revived and complemented Argand’s original concept of Adria as a promontory of Africa. But if Adria was part of Africa, then the paleolatitude anomaly of Adria relative to Europe translated into a huge crustal misft of Gondwana relative to Laurasia when these landmasses were forced into a classic Wegenerian Pangea as typifed by the Bullard ft of the circum-Atlantic continents.