Morphological, Cellular and Molecular Characterization of Posterior
Total Page:16
File Type:pdf, Size:1020Kb
Load more
Recommended publications
-
CV Elaine Seaver, Ph.D
ELAINE C. SEAVER, Ph.D. Professor of Biology My research interests are in the areas of developmental biology, evolution of development, and regeneration. I have been trained in the fields of molecular biology, developmental neurobiology and embryology. I am broadly interested in the cellular and molecular control of patterning during development and regeneration. Many of our studies have utilized marine annelids, which exhibit a highly stereotypic early developmental program, and have robust regenerative abilities. My lab has pioneered the use of the annelid Capitella teleta as a model for development and regeneration studies. We have established several cellular, molecular and imaging techniques for this animal including microinjection, laser deletion, and functional manipulations. I am an expert in animal husbandry of C. teleta, and have optimized conditions to maximize reproduction output. I was instrumental in getting a completely sequenced and annotated genome for Capitella by the Joint Genome Institute, which has facilitated our molecular investigations of the development and regeneration of this species. Our current areas of focus include evolution of cell lineages, regeneration of the germline, and investigating the relationship between development and regeneration. Our longterm goals are to understand how developmental programs evolve and how changes in the developmental program lead to the diversity of animals. Education: 1995 Ph.D. in Biology, University of Utah 1986 B.S. in Biology, McGill University Professional Experience: -
Zoosymposia 2: 25–53 (2009) ISSN 1178-9905 (Print Edition) ZOOSYMPOSIA Copyright © 2009 · Magnolia Press ISSN 1178-9913 (Online Edition)
Zoosymposia 2: 25–53 (2009) ISSN 1178-9905 (print edition) www.mapress.com/zoosymposia/ ZOOSYMPOSIA Copyright © 2009 · Magnolia Press ISSN 1178-9913 (online edition) Capitella teleta, a new species designation for the opportunistic and experimental Capitella sp. I, with a review of the literature for confirmed records JAMES A. BLAKE1,4, JUDITH P. GRASSLE2 & KEVIN J. ECKELBARGER3 1Marine & Coastal Center, AECOM Environment, Woods Hole, MA 02543 USA. E-mail: [email protected] 2Institute of Marine & Coastal Sciences, Rutgers University, New Brunswick, NJ 08901 USA. E-mail: [email protected] 3Darling Marine Center, University of Maine, Walpole, ME 04573 USA. E-mail: [email protected] 4Corresponding author Abstract This paper provides a morphological description of Capitella teleta sp. nov., an opportunistic capitellid that is also commonly used as an experimental polychaete under the provisional designation Capitella sp. I. The species is widely distributed along the east and west coasts of North America and also reported from Japan and the Mediterranean. The species belongs to a group having distinct sexual dimorphism, yet with hermaphrodites occurring under certain conditions. Morphologically, C. teleta has a long, narrow body, with all thoracic segments similar except for sexual modifications on setigers 8–9; the prostomium/peristomium combined are long, narrow and about 2.5 times as long as setiger 1. Capillary setae are present in noto- and neuropodia of setigers 1–7; setigers 8–9 have hooded hooks in noto- and neuropodia of females; genital spines replace notopodial hooks in males. A methyl green staining pattern is limited to some thoracic setigers of females; males lack a distinct staining pattern. -
Download Full Article 2.4MB .Pdf File
Memoirs of Museum Victoria 71: 217–236 (2014) Published December 2014 ISSN 1447-2546 (Print) 1447-2554 (On-line) http://museumvictoria.com.au/about/books-and-journals/journals/memoirs-of-museum-victoria/ Original specimens and type localities of early described polychaete species (Annelida) from Norway, with particular attention to species described by O.F. Müller and M. Sars EIVIND OUG1,* (http://zoobank.org/urn:lsid:zoobank.org:author:EF42540F-7A9E-486F-96B7-FCE9F94DC54A), TORKILD BAKKEN2 (http://zoobank.org/urn:lsid:zoobank.org:author:FA79392C-048E-4421-BFF8-71A7D58A54C7) AND JON ANDERS KONGSRUD3 (http://zoobank.org/urn:lsid:zoobank.org:author:4AF3F49E-9406-4387-B282-73FA5982029E) 1 Norwegian Institute for Water Research, Region South, Jon Lilletuns vei 3, NO-4879 Grimstad, Norway ([email protected]) 2 Norwegian University of Science and Technology, University Museum, NO-7491 Trondheim, Norway ([email protected]) 3 University Museum of Bergen, University of Bergen, PO Box 7800, NO-5020 Bergen, Norway ([email protected]) * To whom correspondence and reprint requests should be addressed. E-mail: [email protected] Abstract Oug, E., Bakken, T. and Kongsrud, J.A. 2014. Original specimens and type localities of early described polychaete species (Annelida) from Norway, with particular attention to species described by O.F. Müller and M. Sars. Memoirs of Museum Victoria 71: 217–236. Early descriptions of species from Norwegian waters are reviewed, with a focus on the basic requirements for re- assessing their characteristics, in particular, by clarifying the status of the original material and locating sampling sites. A large number of polychaete species from the North Atlantic were described in the early period of zoological studies in the 18th and 19th centuries. -
The Effects of Temperature on Hemoglobin in Capitella Teleta
THE EFFECTS OF TEMPERATURE ON HEMOGLOBIN IN CAPITELLA TELETA by Alexander M. Barclay A thesis submitted to the Faculty of the University of Delaware in partial fulfillment of the requirements for the degree of Master of Science in Marine Studies Summer 2013 c 2013 Alexander M. Barclay All Rights Reserved THE EFFECTS OF TEMPERATURE ON HEMOGLOBIN IN CAPITELLA TELETA by Alexander M. Barclay Approved: Adam G. Marsh, Ph.D. Professor in charge of thesis on behalf of the Advisory Committee Approved: Mark A. Moline, Ph.D. Director of the School of Marine Science and Policy Approved: Nancy M. Targett, Ph.D. Dean of the College of Earth, Ocean, and Environment Approved: James G. Richards, Ph.D. Vice Provost for Graduate and Professional Education ACKNOWLEDGMENTS I extend my sincere gratitude to the individuals that either contributed to the execution of my thesis project or to my experience here at the University of Delaware. I would like to give special thanks to my adviser, Adam Marsh, who afforded me an opportunity that exceeded all of my prior expectations. Adam will say that I worked very independently and did not require much guidance, but he served as an inspiration and a role model for me during my studies. Adam sincerely cares for each of his students and takes the time and thought to tailor his research program to fit each person's interests. The reason that I initially chose to work in Adam's lab was that he expressed a genuine excitement for science and for his lifes work. His enthusiasm resonated with me and helped me to find my own exciting path in science. -
Molecular Phylogeny of the Family Capitellidae (Annelida)
Title Molecular Phylogeny of the Family Capitellidae (Annelida) Author(s) Tomioka, Shinri; Kakui, Keiichi; Kajihara, Hiroshi Zoological Science, 35(5), 436-445 Citation https://doi.org/10.2108/zs180009 Issue Date 2018-10 Doc URL http://hdl.handle.net/2115/75605 Type article File Information Zoological Science35-5_436‒445(2018).pdf Instructions for use Hokkaido University Collection of Scholarly and Academic Papers : HUSCAP ZOOLOGICAL436 SCIENCE 35: 436–445 (2018) S. Tomioka et al. © 2018 Zoological Society of Japan Molecular Phylogeny of the Family Capitellidae (Annelida) Shinri Tomioka1*, Keiichi Kakui2, and Hiroshi Kajihara2 1Rishiri Town Museum, Senhoshi, Rishiri Is., Hokkaido 097-0311, Japan 2Department of Biological Sciences, Faculty of Science, Hokkaido University, N10 W8, Sapporo, Hokkaido 060-0810, Japan Capitellids have emerged as monophyletic in most but not all recent molecular phylogenies, indi- cating that more extensive taxon sampling is necessary. In addition, monophyly of most or all capitellid genera was questionable, as some diagnostic characters vary ontogenetically within individuals. We tested the monophyly of Capitellidae and eight capitellid genera using phyloge- netic analyses of combined 18S, 28S, H3, and COI gene sequences from 36 putative capitellid spe- cies. In our trees, Capitellidae formed a monophyletic sister group to Echiura, and Capitella was also monophyletic, separated by a long branch from other capitellids. Well-supported clades each containing representatives of different genera, or containing a subset of species within a genus, indicated that Barantolla, Heteromastus, and Notomastus are likely not monophyletic. We mapped three morphological characters traditionally used to define capitellid genera (head width relative to width of first segment, number of thoracic segments, and number of segments with capillary chae- tae) onto our tree. -
Trophic Upgrading of Long-Chain Polyunsaturated Fatty Acids By
Marine Biology (2021) 168:67 https://doi.org/10.1007/s00227-021-03874-3 ORIGINAL PAPER Trophic upgrading of long‑chain polyunsaturated fatty acids by polychaetes: a stable isotope approach using Alitta virens Supanut Pairohakul1,3 · Peter J. W. Olive1 · Matthew G. Bentley2 · Gary S. Caldwell1 Received: 5 August 2019 / Accepted: 4 April 2021 © The Author(s) 2021 Abstract Polychaete worms are rich sources of polyunsaturated fatty acids (PUFA) and are increasingly incorporated into aquaculture broodstock diets. Conventionally, the build-up of PUFA in polychaetes was considered passive, with direct accumulation along the food web, originating with microalgae and other primary producers. However, it has been argued that polychaetes (and other multicellular eukaryotes) are capable of PUFA biosynthesis through the elongation and desaturation of precur- sor lipids. We further test this hypothesis in the ecologically and economically important nereid polychaete Alitta virens by adopting a stable isotope labelling approach. Worms were fed a 13C-1-palmitic acid (C16:0) enriched diet with the resulting isotopically enriched lipid products identifed over a 7-day period. The data showed strong evidence of lipid elongation and desaturation, but with a high rate of PUFA turnover. A putative biosynthetic pathway is proposed, terminating with doco- sahexaenoic acid (DHA) via arachidonic (AA) and eicosapentaenoic acids (EPA) and involving a Δ8 desaturase. Introduction bacteria, protists and even by desaturation and chain elonga- tion in many animals (Nichols 2003; Alhazzaa et al. 2011; Long-chain polyunsaturated fatty acids (PUFA) are essential Hughes et al. 2011; De Troch et al. 2012; Galloway et al. components in human and animal nutrition. -
A New Cryptic Species of Neanthes (Annelida: Phyllodocida: Nereididae)
RAFFLES BULLETIN OF ZOOLOGY 2015 RAFFLES BULLETIN OF ZOOLOGY Supplement No. 31: 75–95 Date of publication: 10 July 2015 http://zoobank.org/urn:lsid:zoobank.org:pub:A039A3A6-C05B-4F36-8D7F-D295FA236C6B A new cryptic species of Neanthes (Annelida: Phyllodocida: Nereididae) from Singapore confused with Neanthes glandicincta Southern, 1921 and Ceratonereis (Composetia) burmensis (Monro, 1937) Yen-Ling Lee1* & Christopher J. Glasby2 Abstract. A new cryptic species of Neanthes (Nereididae), N. wilsonchani, new species, is described from intertidal mudflats of eastern Singapore. The new species was confused with both Ceratonereis (Composetia) burmensis (Monro, 1937) and Neanthes glandicincta Southern, 1921, which were found to be conspecific with the latter name having priority. Neanthes glandicincta is newly recorded from Singapore, its reproductive forms (epitokes) are redescribed, and Singapore specimens are compared with topotype material from India. The new species can be distinguished from N. glandicincta by slight body colour differences and by having fewer pharyngeal paragnaths in Areas II (4–8 vs 7–21), III (11–28 vs 30–63) and IV (1–9 vs 7–20), and in the total number of paragnaths for all Areas (16–41 vs 70–113). No significant differences were found in the morphology of the epitokes between the two species. The two species have largely non-overlapping distributions in Singapore; the new species is restricted to Pleistocene coastal alluvium in eastern Singapore, while N. glandicinta occurs in western Singapore as well as in Malaysia and westward to India. Key words. polychaete, new species, taxonomy, ragworm INTRODUCTION Both species are atypical members of their respective nominative genera: N. -
Family Nereididae Marine Sediment Monitoring
Family Nereididae Marine Sediment Monitoring Puget Sound Polychaetes: Nereididae Family Nereididae Family-level characters (from Hilbig, 1994) Prostomium piriform (pear-shaped) or rounded, bearing 2 antennae, two biarticulate palps, and 2 pairs of eyes. Eversible pharynx with 2 sections, the proximal oral ring and the distal maxillary ring which possesses 2 fang-shaped, often serrated terminal jaws; both the oral and maxillary rings may bear groups of papillae or hardened paragnaths of various sizes, numbers, and distribution patterns. Peristomium without parapodia, with 4 pairs of tentacular cirri. Parapodia uniramous in the first 2 setigers and biramous thereafter; parapodia possess several ligules (strap-like lobes) and both a dorsal cirrus and ventral cirrus. Shape, size, location of ligules is distinctive. They are more developed posteriorly, so often need to see ones from median to posterior setigers. Setae generally compound in both noto- and neuropodia; some genera have simple falcigers (blunt-tipped setae)(e.g., Hediste and Platynereis); completely lacking simple capillary setae. Genus and species-level characters The kind and the distribution of the setae distinguish the genera and species. The number and distribution of paragnaths on the pharynx. Unique terminology for this family Setae (see Hilbig, 1994, page 294, for pictures of setae) o Homogomph – two prongs of even length where the two articles of the compound setae connect. o Heterogomph – two prongs of uneven length where the two articles of the compound setae connect. o Spinigers - long articles in the compound setae. o Falcigers – short articles in the compound setae. o So, there can be homogomph falcigers and homogomph spinigers, and heterogomph falcigers and heterogomph spinigers. -
Non-Collinear Hox Gene Expression in Bivalves and the Evolution
www.nature.com/scientificreports OPEN Non‑collinear Hox gene expression in bivalves and the evolution of morphological novelties in mollusks David A. Salamanca‑Díaz1, Andrew D. Calcino1, André L. de Oliveira2 & Andreas Wanninger 1* Hox genes are key developmental regulators that are involved in establishing morphological features during animal ontogeny. They are commonly expressed along the anterior–posterior axis in a staggered, or collinear, fashion. In mollusks, the repertoire of body plans is widely diverse and current data suggest their involvement during development of landmark morphological traits in Conchifera, one of the two major lineages that comprises those taxa that originated from a uni‑shelled ancestor (Monoplacophora, Gastropoda, Cephalopoda, Scaphopoda, Bivalvia). For most clades, and bivalves in particular, data on Hox gene expression throughout ontogeny are scarce. We thus investigated Hox expression during development of the quagga mussel, Dreissena rostriformis, to elucidate to which degree they might contribute to specifc phenotypic traits as in other conchiferans. The Hox/ParaHox complement of Mollusca typically comprises 14 genes, 13 of which are present in bivalve genomes including Dreissena. We describe here expression of 9 Hox genes and the ParaHox gene Xlox during Dreissena development. Hox expression in Dreissena is frst detected in the gastrula stage with widely overlapping expression domains of most genes. In the trochophore stage, Hox gene expression shifts towards more compact, largely mesodermal domains. Only few of these domains can be assigned to specifc developing morphological structures such as Hox1 in the shell feld and Xlox in the hindgut. We did not fnd traces of spatial or temporal staggered expression of Hox genes in Dreissena. -
A Note from the Chair... Newsletter Contents in These Unprecedented Times, It Is with a » Letter from Dept Chair Rob Drewell Pg
Newsletter Fall 2020 A Note from the Chair... Newsletter Contents In these unprecedented times, it is with a » Letter from Dept Chair Rob Drewell Pg. 1 sense of pride that I have the opportunity to write the opening note for the inaugu- » Thank you Drs. Foster & Baker Pg. 2 ral Biology Department newsletter. The » Undergraduate News Pg. 3 new bi-annual Newsletter will highlight » Graduate Student News Pg. 4 the recent events and achievements in » Alumni Spotlight Pg. 5 our community. The intention is to help » connect all our various stakeholders to Faculty News Pg. 6 the Department, including current under- » Post Doc News Pg. 7 graduate and graduate students, alumni, » Staff News Pg. 8 and past and present staff and faculty. As might be expected, 2020 has been a significant and challenging year for faculty members are detailed later in this newsletter. Needless to say, the Department. The ongoing impact of the Covid-19 pandemic has been they will be sorely missed. felt in our teaching and research activities in a way that most of us couldn’t have imagined just a year ago. I have been incredibly impressed by the ability We had the opportunity to welcome two new tenure-track faculty to of students and faculty alike to adapt to the new normal of hybrid teaching our department at the start of the fall semester. Jackie Dresch joins us as modalities, whether operating in online classrooms or with reduced capacity an Associate Professor of Mathematical Biology after previous appoint- in-person courses and labs. I believe this admirable and energetic response ments in Mathematics and Computer Science at Clark and Amherst is indicative of the strength of our Department and the unifying sense of College. -
Hox Gene Expression During Postlarval Development of The
Bakalenko et al. EvoDevo 2013, 4:13 http://www.evodevojournal.com/content/4/1/13 RESEARCH Open Access Hox gene expression during postlarval development of the polychaete Alitta virens Nadezhda I Bakalenko*†, Elena L Novikova†, Alexander Y Nesterenko and Milana A Kulakova Abstract Background: Hox genes are the family of transcription factors that play a key role in the patterning of the anterior- posterior axis of all bilaterian animals. These genes display clustered organization and colinear expression. Expression boundaries of individual Hox genes usually correspond with morphological boundaries of the body. Previously, we studied Hox gene expression during larval development of the polychaete Alitta virens (formerly Nereis virens) and discovered that Hox genes are expressed in nereid larva according to the spatial colinearity principle. Adult Alitta virens consist of multiple morphologically similar segments, which are formed sequentially in the growth zone. Since the worm grows for most of its life, postlarval segments constantly change their position along the anterior-posterior axis. Results: We studied the expression dynamics of the Hox cluster during postlarval development of the nereid Alitta virens and found that 8 out of 11 Hox genes are transcribed as wide gene-specific gradients in the ventral nerve cord, ectoderm, and mesoderm. The expression domains constantly shift in accordance with the changing proportions of the growing worm, so expression domains of most Hox genes do not have stable anterior or/and posterior boundaries. In the course of our study, we revealed long antisense RNA (asRNA) for some Hox genes. Expression patterns of two of these genes were analyzed using whole-mount in-situ hybridization. -
Determination of the Biologically Relevant Sampling Depth for Terrestrial and Aquatic Ecological Risk Assessments
EPA/600/R-15/176 ERASC-015F October 2015 DETERMINATION OF THE BIOLOGICALLY RELEVANT SAMPLING DEPTH FOR TERRESTRIAL AND AQUATIC ECOLOGICAL RISK ASSESSMENTS Ecological Risk Assessment Support Center National Center for Environmental Assessment Office of Research and Development U.S. Environmental Protection Agency Cincinnati, OH NOTICE This document has been subjected to the Agency’s peer and administrative review and has been approved for publication as an EPA document. Mention of trade names or commercial products does not constitute endorsement or recommendation for use. Cover art on left-hand side is an adaptation of illustrations in two Soil Quality Information Sheets published by the USDA, Natural Resources Conservation Service in May 2001: 1) Rangeland Sheet 6, Rangeland Soil Quality—Organic Matter, and 2) Rangeland Sheet 8, Rangeland Soil Quality—Soil Biota. Cover art on right-hand side is an adaptation of an illustration from Life in the Chesapeake Bay, by Alice Jane Lippson and Robert L. Lippson, published by Johns Hopkins University Press, 2715 North Charles Street, Baltimore, MD 21218. Preferred Citation: U.S. EPA (U.S. Environmental Protection Agency). 2015. Determination of the Biologically Relevant Sampling Depth for Terrestrial and Aquatic Ecological Risk Assessments. National Center for Environmental Assessment, Ecological Risk Assessment Support Center, Cincinnati, OH. EPA/600/R-15/176. ii TABLE OF CONTENTS LIST OF TABLES ........................................................................................................................