Porcine rotavirus strain JL94 inner capsid protein VP6 (VP6) mRNA, complete cds GenBank: AY538664.1 FASTA Graphics
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LOCUS AY538664 1356 bp mRNA linear VRL 25-OCT-2004
DEFINITION Porcine rotavirus strain JL94 inner capsid protein VP6 (VP6) mRNA,
complete cds.
ACCESSION AY538664
VERSION AY538664.1
KEYWORDS .
SOURCE Porcine rotavirus
ORGANISM Porcine rotavirus
Viruses; Riboviria; Orthornavirae; Duplornaviricota;
Resentoviricetes; Reovirales; Reoviridae; Sedoreovirinae;
Rotavirus.
REFERENCE 1 (bases 1 to 1356)
AUTHORS Chen,S., Li,Y. and Song,Y.
TITLE Porcine rotavirus JL94 inner capsid protein VP6 mRNA
JOURNAL Unpublished
REFERENCE 2 (bases 1 to 1356)
AUTHORS Chen,S., Li,Y., Shi,D. and Song,Y.
TITLE Direct Submission
JOURNAL Submitted (02-FEB-2004) Molecular Virology & Microbiology,
Veterinary Medicine College, Northeast Agricultural University,
Mucai Street, Harbin, Heilongjiang 150030, ChinaFEATURES Location/Qualifiers source 1..1356
/organism="Porcine rotavirus"
/mol_type="mRNA"
/strain="JL94"
/db_xref="taxon:10913" gene 1..1356
/gene="VP6" CDS 24..1217
/gene="VP6"
/codon_start=1 /product="inner capsid protein VP6"
/protein_id="AAS46764.1"
/translation="MEVLYSLSKTLKDARDKIVEGTLYSNISDLIQQFNQMIVTMNGN
DFQTGGIGNLPIRNWNFDFGLLGTTLLNIDANYVENARTTIEYFIDFIDNVCMDEMAR
ESQRNGIAPQSEALRKLSGIKFKGINFDNSSDYIENWNLQNRRQRTGFVFHKPNILPY
SASFTLNRSQPAHDNLMGTMWINAGSEIQVAGFDYSCAFNAPANIQQFEHVVPLRRAL
TTATITLLPDAERFSFPRVINSADGATTWYFNPVIIRPSNVEVEFLLNGQIINTYQAR
FGTIIARNFDTIRLSFQLVRPPNMTPAVANLFPQAPPFIFHATVGLTLRIESAVCESV
LADASETLLANVTAVRQEYAIPVGPVFPPGMNWTELITNYSPSREDNLQRVFTVASIR
SMLIK"ORIGIN
1 ggcttttaaa cgaagtcttc gacatggagg ttctgtactc attgtcaaaa accttgaaag
61 atgctagaga taaaattgtt gaaggtacat tatactcaaa tataagtgat ttaattcaac
121 aattcaatca aatgatagtt accatgaatg gaaatgattt tcaaacggga ggaataggaa
181 atttgccaat cagaaactgg aattttgatt tcggattact tggcactact ttacttaata
241 tagatgcaaa ttatgttgaa aatgctagaa ctaccattga atatttcatt gattttatag
301 ataatgtgtg tatggatgaa atggctagag agtcgcaacg aaacggaata gctccacaat
361 ctgaagcact gagaaagctg tcaggtatta agtttaaggg aattaatttt gacaattcat
421 ctgattacat tgagaattgg aatttacaaa atagacgaca gcgtactgga ttcgtgttcc
481 ataagccaaa tatacttcca tactcagcat cattcacttt gaatagatca cagccggcac
541 atgataattt aatggggact atgtggatta acgctggatc agaaattcag gtggctggat
601 ttgattattc gtgtgctttt aatgcaccgg caaatattca gcagtttgaa catgtcgtgc
661 cattaagacg tgcacttacg acagctacaa ttactttgct accagatgct gagaggttca
721 gtttcccaag agtgattaat tcagctgatg gcgctactac atggtacttc aatccagtta
781 tcataagacc aagtaatgtt gaagttgaat ttttgttgaa tgggcaaata attaatacgt
841 accaagcgcg atttggaacc atcatagcta gaaattttga tactattcgg ttatcatttc
901 aattagtacg accaccgaat atgacaccag cagttgcaaa cctatttccg caagcaccac
961 catttatatt tcatgctaca gttggactca cactacgaat tgaatctgca gtttgtgaat
1021 ctgtgcttgc ggacgcttcc gaaactttat tggcaaatgt gactgcagtt cgtcaagagt
1081 atgctatacc ggtagggcca gtgttcccac caggtatgaa ttggacagaa ttgattacca
1141 attattcacc ttcaagagaa gataacttgc aacgtgtttt cacagtagct tccattagaa
1201 gcatgttgat taagtgagga ctaggctaac tacctggtat ccgatcttaa tcaacatgta
1261 gctatgtcaa gtcaatcaga ctctgcaagt aagggtatga tttcatactc gctacgtaga
1321 gtaactgttt gaatgacata gtgagaggat gtgacc //