1 Comparison of Myoglobin, Hemoglobin, and Cytochrome C
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Myoglobin Expression Under Hypoxic Condtions In
THESIS IN THE FACE OF HYPOXIA: MYOGLOBIN EXPRESSION UNDER HYPOXIC CONDTIONS IN CULTURED WEDDELL SEAL SKELETAL MUSCLE CELLS Submitted by Michael Anthony De Miranda Jr. Department of Biology In partial fulfillment of the requirements For the degree of Master of Science Colorado State University Fort Collins, Colorado Spring 2012 Master’s Committee: Advisor: Shane Kanatous Gregory Florant Scott Earley Copyright by Michael A. De Miranda Jr. 2012 All Rights Reserved ABSTRACT IN THE FACE OF HYPOXIA: MYOGLOBIN EXPRESSION UNDER HYPOXIC CONDITIONS IN CULTURED WEDDELL SEAL SKELETAL MUSCLE CELLS The hallmark adaptation to breath-hold diving in Weddell seals (Leptonychotes weddellii) is enhanced concentrations of myoglobin in their skeletal muscles. Myoglobin is a cytoplasmic hemoprotein that stores oxygen for use in aerobic metabolism throughout the dive duration. In addition, throughout the duration of the dive, Weddell seals rely on oxygen stored in myoglobin to sustain aerobic metabolism in which lipid is the primary contributor of acetyl CoA for the citric acid cycle. Together, enhanced myoglobin concentrations and a lipid-based aerobic metabolism represent some of the unique adaptations to diving found in skeletal muscle of Weddell seals. This thesis presents data that suggests cultured Weddell seal skeletal muscle cells inherently possess adaptations to diving such as increased myoglobin concentrations, and rely on lipids to fuel aerobic metabolism. I developed the optimum culture media for this unique primary cell line based on myoblast confluence, myoblast growth rates, myotube counts, and myotube widths. Once the culture media was established, I then determined the de novo expression of myoglobin under normoxic and hypoxic oxygen conditions and the metabolic profile of the myotubes under each oxygen condition. -
SUPPLEMENTARY DATA Data Supplement To
SUPPLEMENTARY DATA Data supplement to Perivascular adipose tissue controls insulin-stimulated perfusion, mitochondrial protein expression and glucose uptake in muscle through adipomuscular microvascular anastomoses Surname first author Turaihi Authors & Affiliations Turaihi, Alexander H MD1; Serné, Erik H, MD PhD2; Molthoff, Carla FM PhD3; Koning, Jasper J PhD4; Knol, Jaco PhD6; Niessen, Hans W MD PhD5; Goumans, Marie Jose TH PhD7; van Poelgeest, Erik M MD1; Yudkin, John S MD PhD8; Smulders, Yvo M MD PhD2; Connie R Jimenez, PhD6; van Hinsbergh, Victor WM PhD1; Eringa, Etto C PhD1 ©2020 American Diabetes Association. Published online at http://diabetes.diabetesjournals.org/lookup/suppl/doi:10.2337/db18-1066/-/DC1 SUPPLEMENTARY DATA Western immunoblotting Skeletal muscle samples were lysed up in 1D‐sample buffer (10% glycerol, 62.5 mmol/L Tris (pH 6.8), 2% w/v LDS, 2% w/v DTT) and protein concentration was determined using Pierce 660‐nm protein assay (Thermo scientific, Waltham, MA USA 02 451; 22 660) according to the manufacturer's instructions. Heat shock protein 90 immunoblotting was performed by application of samples (5 µg protein) on 4‐15% Criterion TGX gels (Biorad, Veenendaal, the Netherlands, 5 671 084) and semi‐dry blotting onto PVDF membranes (GE Healthcare‐Fisher, RPN1416F), incubated overnight with rat monoclonal HSP90 antibody (1:1000 dilution) after blocking with 5% milk in TBS‐T (137 mM NaCl, 20 mmol/L Tris pH 7.0 and 0.1% (v/v) Tween [Sigma‐Aldrich, P7949]). After 2 hours incubation with anti-rat, horse radish peroxidase-coupled secondary antibody (Thermo Fisher 62-9520), the blot was stained using ECL‐prime (Fisher scientific, 10 308 449) and analysed on an AI‐600 imaging system (GE Healthcare, Life Sciences). -
The Role of Methemoglobin and Carboxyhemoglobin in COVID-19: a Review
Journal of Clinical Medicine Review The Role of Methemoglobin and Carboxyhemoglobin in COVID-19: A Review Felix Scholkmann 1,2,*, Tanja Restin 2, Marco Ferrari 3 and Valentina Quaresima 3 1 Biomedical Optics Research Laboratory, Department of Neonatology, University Hospital Zurich, University of Zurich, 8091 Zurich, Switzerland 2 Newborn Research Zurich, Department of Neonatology, University Hospital Zurich, University of Zurich, 8091 Zurich, Switzerland; [email protected] 3 Department of Life, Health and Environmental Sciences, University of L’Aquila, 67100 L’Aquila, Italy; [email protected] (M.F.); [email protected] (V.Q.) * Correspondence: [email protected]; Tel.: +41-4-4255-9326 Abstract: Following the outbreak of a novel coronavirus (SARS-CoV-2) associated with pneumonia in China (Corona Virus Disease 2019, COVID-19) at the end of 2019, the world is currently facing a global pandemic of infections with SARS-CoV-2 and cases of COVID-19. Since severely ill patients often show elevated methemoglobin (MetHb) and carboxyhemoglobin (COHb) concentrations in their blood as a marker of disease severity, we aimed to summarize the currently available published study results (case reports and cross-sectional studies) on MetHb and COHb concentrations in the blood of COVID-19 patients. To this end, a systematic literature research was performed. For the case of MetHb, seven publications were identified (five case reports and two cross-sectional studies), and for the case of COHb, three studies were found (two cross-sectional studies and one case report). The findings reported in the publications show that an increase in MetHb and COHb can happen in COVID-19 patients, especially in critically ill ones, and that MetHb and COHb can increase to dangerously high levels during the course of the disease in some patients. -
Realizing the Allosteric Potential of the Tetrameric Protein Kinase a RIΑ Holoenzyme
Structure Article Realizing the Allosteric Potential of the Tetrameric Protein Kinase A RIa Holoenzyme Angela J. Boettcher,1,6 Jian Wu,1,6 Choel Kim,2 Jie Yang,1 Jessica Bruystens,1 Nikki Cheung,1 Juniper K. Pennypacker,1,3 Donald A. Blumenthal,4 Alexandr P. Kornev,3,5 and Susan S. Taylor1,3,5,* 1Department of Chemistry and Biochemistry, University of California at San Diego, La Jolla, CA 92093, USA 2Department of Pharmacology, Baylor College of Medicine, Houston, TX 77030, USA 3Department of Pharmacology, University of California at San Diego, La Jolla, CA 92093, USA 4Department of Pharmacology and Toxicology, University of Utah, Salt Lake City, UT 84112, USA 5Howard Hughes Medical Institute, University of California at San Diego, La Jolla, CA 92093, USA 6These authors contributed equally to this work *Correspondence: [email protected] DOI 10.1016/j.str.2010.12.005 SUMMARY the active site cleft in the C subunit in the inactive holoenzyme but is disordered in the dissociated free R subunits (Li et al., PKA holoenzymes containing two catalytic (C) 2000). The linker, as summarized in Figure 1, can be divided subunits and a regulatory (R) subunit dimer are acti- into three segments, the consensus inhibitor site (P-3 to P+1), vated cooperatively by cAMP. While cooperativity the N-linker that joins the inhibitor site to the D/D domain, and involves the two tandem cAMP binding domains in the C-linker that becomes ordered in the heterodimeric holoen- each R-subunit, additional cooperativity is associ- zyme complex. While much has been learned from the structures ated with the tetramer. -
A Perspective on Mechanisms of Protein Tetramer Formation
Biophysical Journal Volume 85 December 2003 3587–3599 3587 A Perspective on Mechanisms of Protein Tetramer Formation Evan T. Powers* and David L. Powersy *Department of Chemistry, The Scripps Research Institute, La Jolla, California 92037; and yDepartment of Mathematics and Computer Science, Clarkson University, Potsdam, New York 13699 ABSTRACT Homotetrameric proteins can assemble by several different pathways, but have only been observed to use one, in which two monomers associate to form a homodimer, and then two homodimers associate to form a homotetramer. To determine why this pathway should be so uniformly dominant, we have modeled the kinetics of tetramerization for the possible pathways as a function of the rate constants for each step. We have found that competition with the other pathways, in which homotetramers can be formed either by the association of two different types of homodimers or by the successive addition of monomers to homodimers and homotrimers, can cause substantial amounts of protein to be trapped as intermediates of the assembly pathway. We propose that this could lead to undesirable consequences for an organism, and that selective pressure may have caused homotetrameric proteins to evolve to assemble by a single pathway. INTRODUCTION Many proteins must be homotetrameric to be functional. ‘‘MDT’’ stands for monomer-dimer-tetramer and ‘‘a’’ and Prominent examples include transcription factors (e.g., p53) ‘‘b’’ indicate the type of homodimer formed. The pathways (Friedman et al., 1993), transport proteins (e.g., trans- that include monomers, homodimers, homotrimers, and thyretin) (Blake et al., 1974), potassium channels (Deutsch, homotetramers will be denoted MDRT, which stands for 2002; Miller, 2000), water channels (Fujiyoshi et al., 2002), monomer-dimer-trimer-tetramer. -
Mitochondrial Cytochrome C Oxidase As a Target Site for Daunomycin in K-562 Cells and Heart Tissue1
[CANCER RESEARCH 53. 1072-1078. March I. 1993] Mitochondrial Cytochrome c Oxidase as a Target Site for Daunomycin in K-562 Cells and Heart Tissue1 Lefkothea C. Papadopoulou and Asterios S. Tsiftsoglou2 iMhoratory of Pharmacology, Department of Pharmaceutical Sciences. Aristotle University' of Thesstiloniki. Thesstiloniki 540 (Ì6,Greece ABSTRACT cells like ADR (20); (/;) DAU interacts selectively with mitochondrial COX; these interactions appear to be specific in nature and may occur Daunomycin and other structurally related anthracyclines can cause in part via the prosthetic group of heme located in two of the several myelosuppression and cardiomyopathy. We explored the possible mecha- nism(s) by which daunomycin (DAU) interacts with target sites in neo- subunits of this enzyme; (c) DAU and ADR inhibited COX activity in plastic hemopoietic cells and heart tissue. We observed that | 'lli(. i|l) VI a dose-dependent fashion that was prevented by exogenously added interacts selectively with mitochondria! hemoproteins isolated from K-562 hemin. In light of these observations, we propose that mitochondrial cells and rat and bovine heart and forms relatively stable protein com COX may serve as a target site for DAU and presumably other plexes. Isolation, purification, and Chromatographie analysis of the mito anthracyclines on highly proliferating neoplastic cells and heart tissue. chondria! components complexed with [JH(G)]DAU revealed that one of the major components involved is cytochrome c oxidase (COX). Both DAU and ADR caused a dose-dependent inhibition of COX activity in vitro, an MATERIALS AND METHODS event prevented by exogenous hemin. The interaction of DAL with COX Chemicals and Biologicals. Hemin was purchased from Eastman Kodak appears to occur via more than one site, one of which at least appears to (Rochester. -
Diabetes-Induced Mitochondrial Dysfunction in the Retina
Diabetes-Induced Mitochondrial Dysfunction in the Retina Renu A. Kowluru and Saiyeda Noor Abbas 4–9 PURPOSE. Oxidative stress is increased in the retina in diabetes, tase are downregulated. We have reported that the long- and antioxidants inhibit activation of caspase-3 and the devel- term administration of antioxidants inhibits the development opment of retinopathy. The purpose of this study was to of retinopathy in diabetic rats and in galactose-fed rats (another investigate the effect of diabetes on the release of cytochrome model of diabetic retinopathy),3 suggesting an important role c from mitochondria and translocation of Bax into mitochon- for oxidative stress in the development of retinopathy in dia- dria in the rat retina and in the isolated retinal capillary cells. betes. Oxidative stress is involved directly in the upregulation ETHODS of vascular endothelial growth factor in the retina during early M . Mitochondria and cytosol fractions were prepared 10 from retina of rats with streptozotocin-induced diabetes and diabetes. Recent studies from our laboratory have shown that from the isolated retinal endothelial cells and pericytes incu- oxidative stress plays an important role, not only in the devel- opment of retinopathy in diabetes, but also in the resistance of bated in 5 or 20 mM glucose medium for up to 10 days in the 11 presence of superoxide dismutase (SOD) or a synthetic mi- retinopathy to arrest after good glycemic control is initiated. metic of SOD (MnTBAP). The release of cytochrome c into the Capillary cells and neurons are lost in the retina before other histopathology is detectable, and apoptosis has been cytosol and translocation of the proapoptotic protein Bax into 12–15 the mitochondria were determined by the Western blot tech- implicated as one of the mechanism(s). -
Strategies for Increasing Oxidative Stability of (Fresh) Meat Color
O X I D A T I V E P R O C E S S E S I N M E A T Strategies for Increasing Oxidative Stability of (Fresh) Meat Color CAMERON FAUSTMAN*, W.K.M. CHAN, M.P. LYNCH and S.T. JOO Introduction moglobin and myoglobin) and for electron transport during respiration (cytochromes) in the living animal. Skeletal Fresh meat color is determined by the oxidation status muscles which obtain energy primarily by aerobic means of myoglobin. Several reviews of myoglobin chemistry and contain relatively high concentrations of heme proteins when meat color stability, including cured and/or cooked meat compared to those which depend primarily on anaerobic color, have been published (Livingston and Brown, 1981; glycolysis. Giddings, 1977; Faustman and Cassens, 1990a; Renerre, Of the heme proteins found in post-mortem skeletal 1990; Cornforth, 1994). The purpose of this presentation is muscle, myoglobin is the most important for considerations to emphasize recent research findings which impact the oxi- of meat color. The majority of hemoglobin found in the liv- dative stability of myoglobin in fresh meat. Specific atten- ing animal is lost during slaughter as a result of exsan- tion is given to metmyoglobin reduction and antioxidant ap- guination. Some blood is retained in meat (Fleming et al., proaches for minimizing oxymyoglobin oxidation. 1960) and Warriss and Rhodes (1977) estimated the aver- Maintenance of oxymyoglobin and thus a desirable age residual blood content of butcher’s meat to be 0.3%. appearance in fresh meat has significant economic impact. Han et al. (1994) recently published a procedure for deter- Liu et al. -
HOOK™ Maleimide Activated Streptavidin for Conjugation of Streptavidin to Sulfhydryl Groups Containing Proteins, Peptides and Ligands
G-Biosciences 1-800-628-7730 1-314-991-6034 [email protected] A Geno Technology, Inc. (USA) brand name HOOK™ Maleimide Activated Streptavidin For conjugation of Streptavidin to sulfhydryl groups containing proteins, peptides and ligands (Cat. #786-1653, 786-1654) think proteins! think G-Biosciences www.GBiosciences.com INTRODUCTION ................................................................................................................. 3 ITEMS SUPPLIED ................................................................................................................ 4 STORAGE CONDITIONS ...................................................................................................... 4 ADDITIONAL ITEMS NEEDED .............................................................................................. 4 IMPORTANT INFORMATION .............................................................................................. 4 PROTOCOL ......................................................................................................................... 4 PREPARATION OF PROTEIN FOR CONJUGATION TO MALEIMIDE ACTIVATED PROTEIN 4 CONJUGATION REACTION ............................................................................................. 5 STORAGE OF CONJUGATED ANTIBODIES/PROTEINS ......................................................... 5 RELATED PRODUCTS .......................................................................................................... 5 Page 2 of 6 INTRODUCTION Streptavidin is a non-glycosylated -
Relationship Between Beef Colour and Myoglobin
Relationship between beef colour and myoglobin Author: S.H.J.M . Dobbelstein Registration number: 790608185120 Subject code: P052-754 (24 stp) P052-274 (1 stp) Supervisors: Dr. Ir. E.U. Thoden van Velzen (A&F) Dr. Ir.J.P.H . Linssen (WUR) Examiner: Prof. Dr. Ir. M.A.J.S. van Boekel Report 474 Preface This thesis is part of my Master in Food Technology at Wageningen UR. This subject was carried out at the Quality in Chains department of Agrotechnology & Food Innovations (A&F) in co opération with the Product Design and Quality Management Group of Wageningen UR. I worked on this thesis from January till August 2005 at A&F. During my study I became interested in Meat Science and the subject of this thesis fits perfecdy to my interests. During my stay at A&F I had all freedom and responsibility to conduct my research. This made I really enjoyed working on this thesis. Moreover, it increased my knowledge of Meat Science very much. I would like to thank Ulphard Thoden van Velzen, my supervisor at A&F, and Jozef Linssen, my supervisor at the University, for their help during this study. I also want to thank Ronald Holtmaat from ProMessa (Deventer, NL) who kindly provided the meat for this study. Furthermore I would like to thank Aart Zegveld, Dianne Somhorst and Janny Slotboom who helped me with my practical work at A&F. ©Agrotechnology &Foo d Innovations B.V .Membe r of Wageningen UR Abstract The most important quality attribute of fresh beef is its colour. -
Concentration of NADH-Cytochrome B5 Reductase in Erythrocytes of Normal and Methemoglobinemic Individuals Measured with a Quantitative Radioimmunoblotting Assay
Concentration of NADH-cytochrome b5 reductase in erythrocytes of normal and methemoglobinemic individuals measured with a quantitative radioimmunoblotting assay. N Borgese, … , G Pietrini, S Gaetani J Clin Invest. 1987;80(5):1296-1302. https://doi.org/10.1172/JCI113205. Research Article The activity of NADH-cytochrome b5 reductase (NADH-methemoglobin reductase) is generally reduced in red cells of patients with recessive hereditary methemoglobinemia. To determine whether this lower activity is due to reduced concentration of an enzyme with normal catalytic properties or to reduced activity of an enzyme present at normal concentration, we measured erythrocyte reductase concentrations with a quantitative radioimmunoblotting method, using affinity-purified polyclonal antibodies against rat liver microsomal reductase as probe. In five patients with the "mild" form of recessive hereditary methemoglobinemia, in which the activity of erythrocyte reductase was 4-13% of controls, concentrations of the enzyme, measured as antigen, were also reduced to 7-20% of the control values. The concentration of membrane-bound reductase antigen, measured in the ghost fraction, was similarly reduced. Thus, in these patients, the reductase deficit is caused mainly by a reduction in NADH-cytochrome b5 reductase concentration, although altered catalytic properties of the enzyme may also contribute to the reduced enzyme activity. Find the latest version: https://jci.me/113205/pdf Concentration of NADH-Cytochrome b5 Reductase in Erythrocytes of Normal and Methemoglobinemic -
Myoglobin from Equine Skeletal Muscle
Myoglobin from equine skeletal muscle Catalog Number M0630 Storage Temperature –20 C CAS RN 100684-32-0 Precautions and Disclaimer This product is for R&D use only, not for drug, Product Description household, or other uses. Please consult the Safety Molecular mass:1 17.6 kDa Data Sheet for information regarding hazards and safe Extinction coefficient:2 EmM = 12.92 (555 nm) handling practices. pI:3 7.3 (major component) and 6.8 (minor component) Preparation Instructions Myoglobin from horse skeletal muscle is a single chain This protein is soluble in water (10 mg/ml), yielding a heme protein containing 153 amino acid residues. It clear, red brown solution. posesses no disulfide bridges or free -SH groups. Myoglobin contains 8 variously sized right-handed References helical regions, joined by non-ordered or random coil 1. Darbre, P.D. et al., Comparison of the myoglobin of regions. These 8 helices (A, B, C, D, E, F, G, and H) the zebra (Equus burchelli) with that of the horse are folded back on top of one another, and the heme is (Equus cabalus). Biochim. Biophys. Acta, 393(1), situated between helices E and F. The heme is almost 201-204 (1975). totally buried. Only the edge carrying the two 2. Bowen, W.J., The absorption spectra and extinction hydrophylic propionic acid groups is exposed. The coefficients of myoglobin. J. Biol. Chem., 179, 235- heme is held in position by a coordinating complex 245 (1949). between the central Fe(II) atom and 2 histidine residues 3. Radola, B.J., Isoelectric focusing in layers of (on helices E and F, respectively).