Transglutaminases and Obesity in Humans: Association of F13A1 to Adipocyte Hypertrophy and Adipose Tissue Immune Response
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The Genomic Response to Retinal Disease and Injury: Evidence for Endothelin Signaling from Photoreceptors to Glia
4540 • The Journal of Neuroscience, May 4, 2005 • 25(18):4540–4549 Neurobiology of Disease The Genomic Response to Retinal Disease and Injury: Evidence for Endothelin Signaling from Photoreceptors to Glia Amir Rattner1 and Jeremy Nathans1,2 1Department of Molecular Biology and Genetics and 2Departments of Neuroscience and Ophthalmology and Howard Hughes Medical Institute, Johns Hopkins University School of Medicine, Baltimore, Maryland 21205 Regardless of proximal cause, photoreceptor injury or disease almost invariably leads to the activation of Muller cells, the principal glial cells in the retina. This observation implies the existence of signaling systems that inform Muller cells of the health status of photorecep- tors. It further suggests that diverse types of photoreceptor damage elicit a limited range of biochemical responses. Using the mouse retina, we show by microarray, RNA blot, and in situ hybridization that the genomic responses to both light damage and inherited photoreceptor degeneration involve a relatively small number of genes and that the genes activated by these two insults overlap substan- tially with one another and with the genes activated by retinal detachment. Among the induced transcripts, those coding for endothelin2 (Edn2) are unusual in that they are localized to photoreceptors and are also highly induced in all of the tested models of photoreceptor disease or injury. Acute light damage also leads to a Ͼ10-fold increase in endothelin receptor B (Ednrb) in Muller cells 24 h after injury. These observations suggest that photoreceptor-derived EDN2 functions as a general stress signal, that EDN2 signals to Muller cells by binding to EDNRB, and that Muller cells can increase their sensitivity to EDN2 as part of the injury response. -
The Role of the Mtor Pathway in Developmental Reprogramming Of
THE ROLE OF THE MTOR PATHWAY IN DEVELOPMENTAL REPROGRAMMING OF HEPATIC LIPID METABOLISM AND THE HEPATIC TRANSCRIPTOME AFTER EXPOSURE TO 2,2',4,4'- TETRABROMODIPHENYL ETHER (BDE-47) An Honors Thesis Presented By JOSEPH PAUL MCGAUNN Approved as to style and content by: ________________________________________________________** Alexander Suvorov 05/18/20 10:40 ** Chair ________________________________________________________** Laura V Danai 05/18/20 10:51 ** Committee Member ________________________________________________________** Scott C Garman 05/18/20 10:57 ** Honors Program Director ABSTRACT An emerging hypothesis links the epidemic of metabolic diseases, such as non-alcoholic fatty liver disease (NAFLD) and diabetes with chemical exposures during development. Evidence from our lab and others suggests that developmental exposure to environmentally prevalent flame-retardant BDE47 may permanently reprogram hepatic lipid metabolism, resulting in an NAFLD-like phenotype. Additionally, we have demonstrated that BDE-47 alters the activity of both mTOR complexes (mTORC1 and 2) in hepatocytes. The mTOR pathway integrates environmental information from different signaling pathways, and regulates key cellular functions such as lipid metabolism, innate immunity, and ribosome biogenesis. Thus, we hypothesized that the developmental effects of BDE-47 on liver lipid metabolism are mTOR-dependent. To assess this, we generated mice with liver-specific deletions of mTORC1 or mTORC2 and exposed these mice and their respective controls perinatally to -
Supplementary Table S1. Upregulated Genes Differentially
Supplementary Table S1. Upregulated genes differentially expressed in athletes (p < 0.05 and 1.3-fold change) Gene Symbol p Value Fold Change 221051_s_at NMRK2 0.01 2.38 236518_at CCDC183 0.00 2.05 218804_at ANO1 0.00 2.05 234675_x_at 0.01 2.02 207076_s_at ASS1 0.00 1.85 209135_at ASPH 0.02 1.81 228434_at BTNL9 0.03 1.81 229985_at BTNL9 0.01 1.79 215795_at MYH7B 0.01 1.78 217979_at TSPAN13 0.01 1.77 230992_at BTNL9 0.01 1.75 226884_at LRRN1 0.03 1.74 220039_s_at CDKAL1 0.01 1.73 236520_at 0.02 1.72 219895_at TMEM255A 0.04 1.72 201030_x_at LDHB 0.00 1.69 233824_at 0.00 1.69 232257_s_at 0.05 1.67 236359_at SCN4B 0.04 1.64 242868_at 0.00 1.63 1557286_at 0.01 1.63 202780_at OXCT1 0.01 1.63 1556542_a_at 0.04 1.63 209992_at PFKFB2 0.04 1.63 205247_at NOTCH4 0.01 1.62 1554182_at TRIM73///TRIM74 0.00 1.61 232892_at MIR1-1HG 0.02 1.61 204726_at CDH13 0.01 1.6 1561167_at 0.01 1.6 1565821_at 0.01 1.6 210169_at SEC14L5 0.01 1.6 236963_at 0.02 1.6 1552880_at SEC16B 0.02 1.6 235228_at CCDC85A 0.02 1.6 1568623_a_at SLC35E4 0.00 1.59 204844_at ENPEP 0.00 1.59 1552256_a_at SCARB1 0.02 1.59 1557283_a_at ZNF519 0.02 1.59 1557293_at LINC00969 0.03 1.59 231644_at 0.01 1.58 228115_at GAREM1 0.01 1.58 223687_s_at LY6K 0.02 1.58 231779_at IRAK2 0.03 1.58 243332_at LOC105379610 0.04 1.58 232118_at 0.01 1.57 203423_at RBP1 0.02 1.57 AMY1A///AMY1B///AMY1C///AMY2A///AMY2B// 208498_s_at 0.03 1.57 /AMYP1 237154_at LOC101930114 0.00 1.56 1559691_at 0.01 1.56 243481_at RHOJ 0.03 1.56 238834_at MYLK3 0.01 1.55 213438_at NFASC 0.02 1.55 242290_at TACC1 0.04 1.55 ANKRD20A1///ANKRD20A12P///ANKRD20A2/// -
Adipose Derived Mesenchymal Stem Cell Differentiation Into Adipogenic and Osteogenic Stem Cells
vv ISSN: 2641-3000 DOI: https://dx.doi.org/10.17352/sscrt LIFE SCIENCES GROUP Hassan IH El Sayyad1*, Mohamed A Sobh2, Soad A Khalifa1 and Omnia KR Research Article 3 El-Sayyad Adipose Derived Mesenchymal Stem 1Zoology Department, Faculty of Science, Egypt 2Urology & Nephrology Center, Research Center, Egypt Cell Differentiation into Adipogenic 3Pediatric Mansoura University Hospital, Mansoura University, Egypt and Osteogenic Stem Cells Dates: Received: 08 December, 2016; Accepted: 23 December, 2016; Published: 29 December, 2016 *Corresponding author: Hassan IH El-Sayyad, Depart- Abstract ment of Zoology, Faculty of Science, Mansoura University, Mansoura, Egypt, Tel: 0020502254850; Objective: Lipoaspiration of human breast fats are important source of adipocyte stem cells E-mail: (hAMSCs) which play a great role in regenerative medicine. The present study illustrates its capability of its transformation and characterization of adipocyte, osteogenic or chondrogenic cells. https://www.peertechz.com Methods and results: The hAMSCs were positive for CD13, CD29, CD105 and CD90 and negative CD34 and CD 14. The hAMSCs were cultured in adipogenic or osteogenic culture for 4,7,14 & 21 days. Gene expression for adipogenic (PCR of leptin, peroxisome proliferator-activated receptor-γ and lipoprotein lipase) and osteogenic (osteocalcin) cells were carried out. Biochemical assessments of adipogenic (lipoprotein lipase enzyme and glycerol-3-phosphate dehydrogenase) and osteogenic (alkaline phosphatase, B-galactosidase and calcium content) markers. Also, light and transmission electron microscopic investigation of adipocyte stem cell culture were investigated at 4,7,14 & 21 days in both two models. Adipocyte derived from hAMSCs displayed fi broblastic morphology and confl uency at 7 days and fl at-shape with positive oil red staining at 14 &21 days. -
Regulatory Micrornas in Brown, Brite and White Adipose Tissue
cells Review Regulatory microRNAs in Brown, Brite and White Adipose Tissue Seley Gharanei 1,2, Kiran Shabir 3 , James E. Brown 3,4, Martin O. Weickert 1,2,5 , 1,2 1,2,3, 1,2,3, , Thomas M. Barber , Ioannis Kyrou y and Harpal S. Randeva * y 1 Warwickshire Institute for the Study of Diabetes, Endocrinology and Metabolism (WISDEM), University Hospitals Coventry and Warwickshire NHS Trust, Coventry CV2 2DX, UK; [email protected] (S.G.); [email protected] (M.O.W.); [email protected] (T.M.B.); [email protected] (I.K.) 2 Warwick Medical School, University of Warwick, Coventry CV4 7AL, UK 3 Aston Medical Research Institute, Aston Medical School, College of Health and Life Sciences, Aston University, Birmingham B4 7ET, UK; [email protected] (K.S.); [email protected] (J.E.B.) 4 School of Biosciences, College of Health and Life Sciences, Aston University, Birmingham B4 7ET, UK 5 Centre of Applied Biological & Exercise Sciences, Faculty of Health & Life Sciences, Coventry University, Coventry CV1 5FB, UK * Correspondence: [email protected] Joint senior authors; contributed equally to the manuscript. y Received: 30 September 2020; Accepted: 13 November 2020; Published: 16 November 2020 Abstract: MicroRNAs (miRNAs) constitute a class of short noncoding RNAs which regulate gene expression by targeting messenger RNA, inducing translational repression and messenger RNA degradation. This regulation of gene expression by miRNAs in adipose tissue (AT) can impact on the regulation of metabolism and energy homeostasis, particularly considering the different types of adipocytes which exist in mammals, i.e., white adipocytes (white AT; WAT), brown adipocytes (brown AT; BAT), and inducible brown adipocytes in WAT (beige or brite or brown-in-white adipocytes). -
The RNA-Binding Protein SERBP1 Functions As a Novel Oncogenic
Kosti et al. Genome Biology (2020) 21:195 https://doi.org/10.1186/s13059-020-02115-y RESEARCH Open Access The RNA-binding protein SERBP1 functions as a novel oncogenic factor in glioblastoma by bridging cancer metabolism and epigenetic regulation Adam Kosti1,2†, Patricia Rosa de Araujo1,2†, Wei-Qing Li1,3†, Gabriela D. A. Guardia4†, Jennifer Chiou5†, Caihong Yi1, Debashish Ray6, Fabiana Meliso4, Yi-Ming Li3, Talia Delambre1, Mei Qiao1, Suzanne S. Burns1ˆ, Franziska K. Lorbeer1, Fanny Georgi1, Markus Flosbach1, Sarah Klinnert1, Anne Jenseit1, Xiufen Lei1, Carolina Romero Sandoval1, Kevin Ha6, Hong Zheng6, Renu Pandey1, Aleksandra Gruslova7, Yogesh K. Gupta1, Andrew Brenner8, Erzsebet Kokovay2, Timothy R. Hughes6,9,10, Quaid D. Morris6,9,11, Pedro A. F. Galante4*, Stefano Tiziani5* and Luiz O. F. Penalva1,2* * Correspondence: pgalante@ mochsl.org.br; [email protected]. Abstract edu; [email protected] ˆSuzanne S. Burns is deceased. Background: RNA-binding proteins (RBPs) function as master regulators of gene 4Centro de Oncologia Molecular, expression. Alterations in RBP expression and function are often observed in cancer Hospital Sírio-Libanês, São Paulo, and influence critical pathways implicated in tumor initiation and growth. São Paulo 01309-060, Brazil 5Department of Nutritional Identification and characterization of oncogenic RBPs and their regulatory networks Sciences, Dell Pediatric Research provide new opportunities for targeted therapy. Institute, Dell Medical School, The University of Texas at Austin, Austin, Results: We identify the RNA-binding protein SERBP1 as a novel regulator of TX 78712, USA glioblastoma (GBM) development. High SERBP1 expression is prevalent in GBMs and 1Children’s Cancer Research correlates with poor patient survival and poor response to chemo- and radiotherapy. -
Human Skeletal Muscles Replaced to a High Degree by White Adipose Tissue
Okajimas Folia Anat. Jpn.,Replacement 87(4): 165–170, of muscle February, by fat 2011165 Human skeletal muscles replaced to a high degree by white adipose tissue By Keisuke INA1, Hirokazu KITAMURA1, Takayuki MASAKI2, Shuji TATSUKAWA1, Hironobu YOSHIMATSU2 and Yoshihisa FUJIKURA1 1 Department of Molecular Anatomy, Faculty of Medicine, Oita University 2 Department of Internal Medicine 1, Faculty of Medicine, Oita University, 1-1, Idaigaoka, Hasama-machi, Yufu, Oita, 879-5593, Japan –Received for Publication, August 28, 2010– Key Words: fatty degeneration, skeletal muscle, diabetes mellitus, renal failure, hypothyroidism Summary: Extreme replacement of skeletal muscles by adipose tissue was found in an 86-year old Japanese male cadaver during dissection practice for medical students at Oita University School of Medicine. Especially, the bilateral sartorius muscles looked overall like adipose tissue. The man had suffered from diabetes mellitus, renal failure, hypertension and hy- pothyroidism before his death. He was also an alcohol drinker. He had been bedridden late in life. The cause of death was renal failure. In microscopy, the adipose tissue-like sartorius muscle was shown to consist of leptin-positive adipocytes with a small number of degenerated muscle fibers. Fatty replacement, or fatty degeneration, appears to result from endocrine and metabolic disorders, and being bedridden leads to muscle atrophy and damage, although the origin of the adipocytes which emerged in the degenerated muscles is unknown. Introduction tally denerved muscle atrophy (Dulor et al., 19984)). A recent report has demonstrated that, when a muscle There are two distinct types of fat accumulation in is injured, the event which subsequently occurs is either skeletal muscles: intramyocellular fat deposits and extra- myocyte regeneration or fatty degeneration, depending myocellular adipocyte accumulation. -
Analysis of the Indacaterol-Regulated Transcriptome in Human Airway
Supplemental material to this article can be found at: http://jpet.aspetjournals.org/content/suppl/2018/04/13/jpet.118.249292.DC1 1521-0103/366/1/220–236$35.00 https://doi.org/10.1124/jpet.118.249292 THE JOURNAL OF PHARMACOLOGY AND EXPERIMENTAL THERAPEUTICS J Pharmacol Exp Ther 366:220–236, July 2018 Copyright ª 2018 by The American Society for Pharmacology and Experimental Therapeutics Analysis of the Indacaterol-Regulated Transcriptome in Human Airway Epithelial Cells Implicates Gene Expression Changes in the s Adverse and Therapeutic Effects of b2-Adrenoceptor Agonists Dong Yan, Omar Hamed, Taruna Joshi,1 Mahmoud M. Mostafa, Kyla C. Jamieson, Radhika Joshi, Robert Newton, and Mark A. Giembycz Departments of Physiology and Pharmacology (D.Y., O.H., T.J., K.C.J., R.J., M.A.G.) and Cell Biology and Anatomy (M.M.M., R.N.), Snyder Institute for Chronic Diseases, Cumming School of Medicine, University of Calgary, Calgary, Alberta, Canada Received March 22, 2018; accepted April 11, 2018 Downloaded from ABSTRACT The contribution of gene expression changes to the adverse and activity, and positive regulation of neutrophil chemotaxis. The therapeutic effects of b2-adrenoceptor agonists in asthma was general enriched GO term extracellular space was also associ- investigated using human airway epithelial cells as a therapeu- ated with indacaterol-induced genes, and many of those, in- tically relevant target. Operational model-fitting established that cluding CRISPLD2, DMBT1, GAS1, and SOCS3, have putative jpet.aspetjournals.org the long-acting b2-adrenoceptor agonists (LABA) indacaterol, anti-inflammatory, antibacterial, and/or antiviral activity. Numer- salmeterol, formoterol, and picumeterol were full agonists on ous indacaterol-regulated genes were also induced or repressed BEAS-2B cells transfected with a cAMP-response element in BEAS-2B cells and human primary bronchial epithelial cells by reporter but differed in efficacy (indacaterol $ formoterol . -
Altered Adipose Tissue and Adipocyte Function in the Pathogenesis of Metabolic Syndrome
Altered adipose tissue and adipocyte function in the pathogenesis of metabolic syndrome C. Ronald Kahn, … , Guoxiao Wang, Kevin Y. Lee J Clin Invest. 2019;129(10):3990-4000. https://doi.org/10.1172/JCI129187. Review Series Over the past decade, great progress has been made in understanding the complexity of adipose tissue biology and its role in metabolism. This includes new insights into the multiple layers of adipose tissue heterogeneity, not only differences between white and brown adipocytes, but also differences in white adipose tissue at the depot level and even heterogeneity of white adipocytes within a single depot. These inter- and intra-depot differences in adipocytes are developmentally programmed and contribute to the wide range of effects observed in disorders with fat excess (overweight/obesity) or fat loss (lipodystrophy). Recent studies also highlight the underappreciated dynamic nature of adipose tissue, including potential to undergo rapid turnover and dedifferentiation and as a source of stem cells. Finally, we explore the rapidly expanding field of adipose tissue as an endocrine organ, and how adipose tissue communicates with other tissues to regulate systemic metabolism both centrally and peripherally through secretion of adipocyte-derived peptide hormones, inflammatory mediators, signaling lipids, and miRNAs packaged in exosomes. Together these attributes and complexities create a robust, multidimensional signaling network that is central to metabolic homeostasis. Find the latest version: https://jci.me/129187/pdf REVIEW SERIES: MECHANISMS UNDERLYING THE METABOLIC SYNDROME The Journal of Clinical Investigation Series Editor: Philipp E. Scherer Altered adipose tissue and adipocyte function in the pathogenesis of metabolic syndrome C. Ronald Kahn,1 Guoxiao Wang,1 and Kevin Y. -
The Role of Adipose Tissue Mitochondria: Regulation of Mitochondrial Function for the Treatment of Metabolic Diseases
International Journal of Molecular Sciences Review The Role of Adipose Tissue Mitochondria: Regulation of Mitochondrial Function for the Treatment of Metabolic Diseases 1, 1, 1,2 1,2 1,2, Jae Ho Lee y, Anna Park y, Kyoung-Jin Oh , Sang Chul Lee , Won Kon Kim * and Kwang-Hee Bae 1,2,* 1 Metabolic Regulation Research Center, Korea Research Institute of Bioscience and Biotechnology (KRIBB), Daejeon 34141, Korea 2 Department of Functional Genomics, KRIBB School of Bioscience, Korea University of Science and Technology (UST), Daejeon 34141, Korea * Correspondence: [email protected] (W.K.K.); [email protected] (K.-H.B.) These authors contributed equally to this work. y Received: 28 August 2019; Accepted: 30 September 2019; Published: 4 October 2019 Abstract: Mitochondria play a key role in maintaining energy homeostasis in metabolic tissues, including adipose tissues. The two main types of adipose tissues are the white adipose tissue (WAT) and the brown adipose tissue (BAT). WAT primarily stores excess energy, whereas BAT is predominantly responsible for energy expenditure by non-shivering thermogenesis through the mitochondria. WAT in response to appropriate stimuli such as cold exposure and β-adrenergic agonist undergoes browning wherein it acts as BAT, which is characterized by the presence of a higher number of mitochondria. Mitochondrial dysfunction in adipocytes has been reported to have strong correlation with metabolic diseases, including obesity and type 2 diabetes. Dysfunction of mitochondria results in detrimental effects on adipocyte differentiation, lipid metabolism, insulin sensitivity, oxidative capacity, and thermogenesis, which consequently lead to metabolic diseases. Recent studies have shown that mitochondrial function can be improved by using thiazolidinedione, mitochondria-targeted antioxidants, and dietary natural compounds; by performing exercise; and by controlling caloric restriction, thereby maintaining the metabolic homeostasis by inducing adaptive thermogenesis of BAT and browning of WAT. -
Adipose Tissue: SHH and Dermal Adipogenesis
RESEARCH HIGHLIGHTS Nature Reviews Endocrinology | Published online 18 Nov 2016; doi:10.1038/nrendo.2016.192 ADIPOSE TISSUE SHH and dermal adipogenesis In the dermis, adipose tissue adipogenesis. SHH is secreted from overexpression increased skin thick- expands in sync with the growth of HF-TACs; by knocking out this ness, which was also associated with hair follicles, but the mechanism that protein specifically in HF-TACs of increased Pparg expression. couples the growth of the two tissues mice, the dermal adipose layer failed Hsu and his colleagues hope is unclear. In new research, investiga- to expand. that their findings will eventually tors have found that sonic hedgehog This effect was specific to SHH help to mitigate the adverse effects (SHH) secreted from hair follicle secreted from HF-TACs and not of chemotherapy, such as thinning transit-amplifying cells (HF-TACs) from hair follicles, as in mice with of the skin, hair loss and increased is required for expansion of both hair follicles lacking smoothened susceptibility to infections. “Some dermal adipocytes and hair follicles. (Smo), a protein that mediates the of these symptoms might be a con- “TACs are stem cell progeny downstream effect of SHH, dermal sequence of a compromised ability responsible for generating a large adipogenesis was unaffected but of HF-TACs to direct changes amount of downstream cell types the follicles are shorter. Moreover, in dermal adipocytes, which are directly,” explains Ya-Chieh Hsu by deleting Smo in different skin important for skin thickening and who led the study. “TACs might be cell types, Hsu and his colleagues innate immunity,” concludes Hsu. -
Metabolism and Secretory Function of White Adipose Tissue: Effect of Dietary Fat
“main” — 2009/7/27 — 14:26 — page 453 — #1 Anais da Academia Brasileira de Ciências (2009) 81(3): 453-466 (Annals of the Brazilian Academy of Sciences) ISSN 0001-3765 www.scielo.br/aabc Metabolism and secretory function of white adipose tissue: effect of dietary fat CLÁUDIA M. OLLER DO NASCIMENTO1, ELIANE B. RIBEIRO1 and LILA M. OYAMA2 1Departamento de Fisiologia, Universidade Federal de São Paulo, Campus São Paulo Rua Botucatu, 862, 2◦ andar, 04023-060 São Paulo, SP, Brasil 2Departamento de Biociências, Universidade Federal de São Paulo, Campus Baixada Santista Av. Ana Costa, 95, 11060-001 Santos, SP, Brasil Manuscript received on August 21, 2008; accepted for publication on February 2, 2009; presented by LUIZ R. TRAVASSOS ABSTRACT Approximately 40% of the total energy consumed by western populations is represented by lipids, most of them being ingested as triacylglycerols and phospholipids. The focus of this review is to analyze the effect of the type of dietary fat on white adipose tissue metabolism and secretory function, particularly on haptoglobin, TNF-α, plasminogen activator inhibitor-1 and adiponectin secretion. Previous studies have demonstrated that the duration of the exposure to the high-fat feeding, amount of fatty acid present in the diet and the type of fatty acid may or may not have a significant effect on adipose tissue metabolism. However, the long-term or short-term high fat diets, especially rich in saturated fatty acids, probably by activation of toll-like receptors, stimulated the expression of proinflammatory adipokines and inhibited adiponectin expression. Further studies are needed to investigate the cellular mechanisms by which dietary fatty acids affect white adipose tissue metabolism and secretory functions.