Discuss the Use of Oncolytic Viruses As Cancer Therapeutics
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Mitochondrial Metabolism and Cancer
Cell Research (2018) 28:265-280. REVIEW www.nature.com/cr Mitochondrial metabolism and cancer Paolo Ettore Porporato1, *, Nicoletta Filigheddu2, *, José Manuel Bravo-San Pedro3, 4, 5, 6, 7, Guido Kroemer3, 4, 5, 6, 7, 8, 9, Lorenzo Galluzzi3, 10, 11 1Department of Molecular Biotechnology and Health Sciences, Molecular Biotechnology Center, 10124 Torino, Italy; 2Department of Translational Medicine, University of Piemonte Orientale, 28100 Novara, Italy; 3Université Paris Descartes/Paris V, Sorbonne Paris Cité, 75006 Paris, France; 4Université Pierre et Marie Curie/Paris VI, 75006 Paris, France; 5Equipe 11 labellisée par la Ligue contre le Cancer, Centre de Recherche des Cordeliers, 75006 Paris, France; 6INSERM, U1138, 75006 Paris, France; 7Meta- bolomics and Cell Biology Platforms, Gustave Roussy Comprehensive Cancer Institute, 94805 Villejuif, France; 8Pôle de Biologie, Hopitâl Européen George Pompidou, AP-HP, 75015 Paris, France; 9Department of Women’s and Children’s Health, Karolinska University Hospital, 17176 Stockholm, Sweden; 10Department of Radiation Oncology, Weill Cornell Medical College, New York, NY 10065, USA; 11Sandra and Edward Meyer Cancer Center, New York, NY 10065, USA Glycolysis has long been considered as the major metabolic process for energy production and anabolic growth in cancer cells. Although such a view has been instrumental for the development of powerful imaging tools that are still used in the clinics, it is now clear that mitochondria play a key role in oncogenesis. Besides exerting central bioen- ergetic functions, mitochondria provide indeed building blocks for tumor anabolism, control redox and calcium ho- meostasis, participate in transcriptional regulation, and govern cell death. Thus, mitochondria constitute promising targets for the development of novel anticancer agents. -
Promoting the Accumulation of Tumor-Specific T Cells in Tumor
PROTOCOL Promoting the accumulation of tumor-specific T cells in tumor tissues by dendritic cell vaccines and chemokine-modulating agents Nataša Obermajer1 , Julie Urban2, Eva Wieckowski1,2,6, Ravikumar Muthuswamy1, Roshni Ravindranathan1, David L Bartlett1 & Pawel Kalinski1–5 1Department of Surgery, University of Pittsburgh, Pittsburgh, Pennsylvania, USA. 2Immunotransplantation Center, University of Pittsburgh, Pittsburgh, Pennsylvania, USA. 3University of Pittsburgh Cancer Institute, Hillman Cancer Center, University of Pittsburgh, Pittsburgh, Pennsylvania, USA. 4Department of Immunology, University of Pittsburgh, Pittsburgh, Pennsylvania, USA. 5Department of Bioengineering, University of Pittsburgh, Pittsburgh, Pennsylvania, USA. 6Deceased. Correspondence should be addressed to P.K. ([email protected]). Published online 18 January 2018; doi:10.1038/nprot.2017.130 This protocol describes how to induce large numbers of tumor-specific cytotoxic T cells (CTLs) in the spleens and lymph nodes of mice receiving dendritic cell (DC) vaccines and how to modulate tumor microenvironments (TMEs) to ensure effective homing of the vaccination-induced CTLs to tumor tissues. We also describe how to evaluate the numbers of tumor-specific CTLs within tumors. The protocol contains detailed information describing how to generate a specialized DC vaccine with augmented ability to induce tumor-specific CTLs. We also describe methods to modulate the production of chemokines in the TME and show how to quantify tumor-specific CTLs in the lymphoid organs and tumor tissues of mice receiving different treatments. The combined experimental procedure, including tumor implantation, DC vaccine generation, chemokine-modulating (CKM) approaches, and the analyses of tumor-specific systemic and intratumoral immunity is performed over 30–40 d. The presented ELISpot-based ex vivo CTL assay takes 6 h to set up and 5 h to develop. -
CATALOG NUMBER: AKR-213 STORAGE: Liquid Nitrogen Note
CATALOG NUMBER: AKR-213 STORAGE: Liquid nitrogen Note: For best results begin culture of cells immediately upon receipt. If this is not possible, store at -80ºC until first culture. Store subsequent cultured cells long term in liquid nitrogen. QUANTITY & CONCENTRATION: 1 mL, 1 x 106 cells/mL in 70% DMEM, 20% FBS, 10% DMSO Background HeLa cells are the most widely used cancer cell lines in the world. These cells were taken from a lady called Henrietta Lacks from her cancerous cervical tumor in 1951 which today is known as the HeLa cells. These were the very first cell lines to survive outside the human body and grow. Both GFP and blasticidin-resistant genes are introduced into parental HeLa cells using lentivirus. Figure 1. HeLa/GFP Cell Line. Left: GFP Fluorescence; Right: Phase Contrast. Quality Control This cryovial contains at least 1.0 × 106 HeLa/GFP cells as determined by morphology, trypan-blue dye exclusion, and viable cell count. The HeLa/GFP cells are tested free of microbial contamination. Medium 1. Culture Medium: D-MEM (high glucose), 10% fetal bovine serum (FBS), 0.1 mM MEM Non- Essential Amino Acids (NEAA), 2 mM L-glutamine, 1% Pen-Strep, (optional) 10 µg/mL Blasticidin. 2. Freeze Medium: 70% DMEM, 20% FBS, 10% DMSO. Methods Establishing HeLa/GFP Cultures from Frozen Cells 1. Place 10 mL of complete DMEM growth medium in a 50-mL conical tube. Thaw the frozen cryovial of cells within 1–2 minutes by gentle agitation in a 37°C water bath. Decontaminate the cryovial by wiping the surface of the vial with 70% (v/v) ethanol. -
How Accurate Are Cancer Cell Lines? Some Argue That Tumour Cells Obtained Directly from Patients Are the Best Way to Study Cancer Genomics
NEWS NATURE|Vol 463|18 February 2010 How accurate are cancer cell lines? Some argue that tumour cells obtained directly from patients are the best way to study cancer genomics. For decades, cancer cell cultures grown in Petri dishes have been the foundation of can- cer biology and the quest for drug treatments. But now that biologists are exploring cancer genomes, some are asking whether they should pursue a more expensive, less proven strategy RF.COM/SPL MEDICAL that may give a truer picture of key muta- tions: sequencing cells from tumours plucked directly from patients. Of the first six cancer genome sequences to be published, three have come from estab- lished cell lines and three from primary tumours. Hundreds more sequences are expected soon, both from individual labs and from major efforts such as the Cancer Genome Atlas in Bethesda, Maryland. And although most researchers continue to have a foot in both camps, the atlas project excludes work on cell lines. The major criticism of cell lines is that not all cancer types can be grown indefinitely in the laboratory. Those that do grow differ genetically from primary tissue, accumulating new mutations as they adapt to their artificial Cultured cancer cells might have different genetic characteristics from in situ tumours. environment. When implanted in rodents, brain-cancer cell lines tend to form a ‘bowling the University of California, Los Angeles, it in the cancer genome, says Stratton. His group ball’ mass of cells rather than infiltrating the will take thousands of comparisons between can then distinguish between segments of the brain like a spider web, as they do in humans, tumour sequences and normal DNA to equal genome that are lost as a result of breakage says Howard Fine, head of neuro-oncology at the benefit of sequencing the top 100 cell lines, from those in which a tumour-suppressing the National Institutes of Health in Bethesda. -
Pharmacological Improvement of Oncolytic Virotherapy
PHARMACOLOGICAL IMPROVEMENT OF ONCOLYTIC VIROTHERAPY Mohammed Selman Thesis submitted to the Faculty of Graduate and Postdoctoral Studies in partial fulfillment of the requirements for the Doctorate of Philosophy in Biochemistry Department of Biochemistry, Microbiology & Immunology Faculty of Medicine University of Ottawa © Mohammed Selman, Ottawa, Canada, 2018 Abstract Oncolytic viruses (OV) are an emerging class of anticancer bio-therapeutics that induce antitumor immunity through selective replication in cancer cells. However, the efficacy of OVs as single agents remains limited. We postulate that resistance to oncolytic virotherapy results in part from the failure of tumor cells to be sufficiently infected. In this study, we provide evidence that in the context of sarcoma, a highly heterogeneous malignancy, the infection of tumors by different oncolytic viruses varies greatly. Similarly, for a given oncolytic virus, productive infection of tumors across patient samples varies by many orders of magnitude. To overcome this issue, we hypothesize that the infection of resistant tumors can be achieved through the use of selected small molecules. Here, we have identified two novel drug classes with the ability to improve the efficacy of OV therapy: fumaric and maleic acid esters (FMAEs) and vanadium compounds. FMAEs are enhancing infection of cancer cells by several oncolytic viruses in cancer cell lines and human tumor biopsies. The ability of FMAEs to enhance viral spread is due to their ability to inhibit type I IFN production and response, which is associated with their ability to block nuclear translocation of transcription factor NF-κB. Vanadium-based phosphatase inhibitors enhance OV infection of RNA viruses in vitro and ex vivo, in resistant cancer cell lines. -
Molecular Evolutionary Analysis of Plastid Genomes in Nonphotosynthetic Angiosperms and Cancer Cell Lines
The Pennsylvania State University The Graduate School Department or Biology MOLECULAR EVOLUTIONARY ANALYSIS OF PLASTID GENOMES IN NONPHOTOSYNTHETIC ANGIOSPERMS AND CANCER CELL LINES A Dissertation in Biology by Yan Zhang 2012 Yan Zhang Submitted in Partial Fulfillment of the Requirements for the Degree of Doctor of Philosophy Dec 2012 The Dissertation of Yan Zhang was reviewed and approved* by the following: Schaeffer, Stephen W. Professor of Biology Chair of Committee Ma, Hong Professor of Biology Altman, Naomi Professor of Statistics dePamphilis, Claude W Professor of Biology Dissertation Adviser Douglas Cavener Professor of Biology Head of Department of Biology *Signatures are on file in the Graduate School iii ABSTRACT This thesis explores the application of evolutionary theory and methods in understanding the plastid genome of nonphotosynthetic parasitic plants and role of mutations in tumor proliferations. We explore plastid genome evolution in parasitic angiosperms lineages that have given up the primary function of plastid genome – photosynthesis. Genome structure, gene contents, and evolutionary dynamics were analyzed and compared in both independent and related parasitic plant lineages. Our studies revealed striking similarities in changes of gene content and evolutionary dynamics with the loss of photosynthetic ability in independent nonphotosynthetic plant lineages. Evolutionary analysis suggests accelerated evolution in the plastid genome of the nonphotosynthetic plants. This thesis also explores the application of phylogenetic and evolutionary analysis in cancer biology. Although cancer has often been likened to Darwinian process, very little application of molecular evolutionary analysis has been seen in cancer biology research. In our study, phylogenetic approaches were used to explore the relationship of several hundred established cancer cell lines based on multiple sequence alignments constructed with variant codons and residues across 494 and 523 genes. -
Oncolytic Herpes Simplex Virus-Based Therapies for Cancer
cells Review Oncolytic Herpes Simplex Virus-Based Therapies for Cancer Norah Aldrak 1 , Sarah Alsaab 1,2, Aliyah Algethami 1, Deepak Bhere 3,4,5 , Hiroaki Wakimoto 3,4,5,6 , Khalid Shah 3,4,5,7, Mohammad N. Alomary 1,2,* and Nada Zaidan 1,2,* 1 Center of Excellence for Biomedicine, Joint Centers of Excellence Program, King Abdulaziz City for Science and Technology, P.O. Box 6086, Riyadh 11451, Saudi Arabia; [email protected] (N.A.); [email protected] (S.A.); [email protected] (A.A.) 2 National Center for Biotechnology, Life Science and Environmental Research Institute, King Abdulaziz City for Science and Technology, P.O. Box 6086, Riyadh 11451, Saudi Arabia 3 Center for Stem Cell Therapeutics and Imaging (CSTI), Brigham and Women’s Hospital, Harvard Medical School, Boston, MA 02115, USA; [email protected] (D.B.); [email protected] (H.W.); [email protected] (K.S.) 4 Department of Neurosurgery, Brigham and Women’s Hospital, Harvard Medical School, Boston, MA 02115, USA 5 BWH Center of Excellence for Biomedicine, Brigham and Women’s Hospital, Harvard Medical School, Boston, MA 02115, USA 6 Department of Neurosurgery, Massachusetts General Hospital, Harvard Medical School, Boston, MA 02114, USA 7 Harvard Stem Cell Institute, Harvard University, Cambridge, MA 02138, USA * Correspondence: [email protected] (M.N.A.); [email protected] (N.Z.) Abstract: With the increased worldwide burden of cancer, including aggressive and resistant cancers, oncolytic virotherapy has emerged as a viable therapeutic option. Oncolytic herpes simplex virus (oHSV) can be genetically engineered to target cancer cells while sparing normal cells. -
Mitochondrial Metabolism in Carcinogenesis and Cancer Therapy
cancers Review Mitochondrial Metabolism in Carcinogenesis and Cancer Therapy Hadia Moindjie 1,2, Sylvie Rodrigues-Ferreira 1,2,3 and Clara Nahmias 1,2,* 1 Inserm, Institut Gustave Roussy, UMR981 Biomarqueurs Prédictifs et Nouvelles Stratégies Thérapeutiques en Oncologie, 94800 Villejuif, France; [email protected] (H.M.); [email protected] (S.R.-F.) 2 LabEx LERMIT, Université Paris-Saclay, 92296 Châtenay-Malabry, France 3 Inovarion SAS, 75005 Paris, France * Correspondence: [email protected]; Tel.: +33-142-113-885 Simple Summary: Reprogramming metabolism is a hallmark of cancer. Warburg’s effect, defined as increased aerobic glycolysis at the expense of mitochondrial respiration in cancer cells, opened new avenues of research in the field of cancer. Later findings, however, have revealed that mitochondria remain functional and that they actively contribute to metabolic plasticity of cancer cells. Understand- ing the mechanisms by which mitochondrial metabolism controls tumor initiation and progression is necessary to better characterize the onset of carcinogenesis. These studies may ultimately lead to the design of novel anti-cancer strategies targeting mitochondrial functions. Abstract: Carcinogenesis is a multi-step process that refers to transformation of a normal cell into a tumoral neoplastic cell. The mechanisms that promote tumor initiation, promotion and progression are varied, complex and remain to be understood. Studies have highlighted the involvement of onco- genic mutations, genomic instability and epigenetic alterations as well as metabolic reprogramming, Citation: Moindjie, H.; in different processes of oncogenesis. However, the underlying mechanisms still have to be clarified. Rodrigues-Ferreira, S.; Nahmias, C. Mitochondria are central organelles at the crossroad of various energetic metabolisms. -
IL-6 Signaling Blockade During CD40-Mediated Immune Activation Favors Antitumor Factors by Reducing TGF-Β, Collagen Type I
IL-6 Signaling Blockade during CD40-Mediated Immune Activation Favors Antitumor Factors by Reducing TGF-β, Collagen Type I, and PD-L1/PD-1 This information is current as of September 26, 2021. Emma Eriksson, Ioanna Milenova, Jessica Wenthe, Rafael Moreno, Ramon Alemany and Angelica Loskog J Immunol 2019; 202:787-798; Prepublished online 7 January 2019; doi: 10.4049/jimmunol.1800717 Downloaded from http://www.jimmunol.org/content/202/3/787 References This article cites 50 articles, 12 of which you can access for free at: http://www.jimmunol.org/ http://www.jimmunol.org/content/202/3/787.full#ref-list-1 Why The JI? Submit online. • Rapid Reviews! 30 days* from submission to initial decision • No Triage! Every submission reviewed by practicing scientists by guest on September 26, 2021 • Fast Publication! 4 weeks from acceptance to publication *average Subscription Information about subscribing to The Journal of Immunology is online at: http://jimmunol.org/subscription Permissions Submit copyright permission requests at: http://www.aai.org/About/Publications/JI/copyright.html Email Alerts Receive free email-alerts when new articles cite this article. Sign up at: http://jimmunol.org/alerts The Journal of Immunology is published twice each month by The American Association of Immunologists, Inc., 1451 Rockville Pike, Suite 650, Rockville, MD 20852 Copyright © 2019 by The American Association of Immunologists, Inc. All rights reserved. Print ISSN: 0022-1767 Online ISSN: 1550-6606. The Journal of Immunology IL-6 Signaling Blockade during CD40-Mediated Immune Activation Favors Antitumor Factors by Reducing TGF-b, Collagen Type I, and PD-L1/PD-1 Emma Eriksson,* Ioanna Milenova,* Jessica Wenthe,* Rafael Moreno,† Ramon Alemany,† and Angelica Loskog*,‡ IL-6 plays a role in cancer pathogenesis via its connection to proteins involved in the formation of desmoplastic stroma and to immunosuppression by driving differentiation of myeloid suppressor cells together with TGF-b. -
Human Mitochondrial Peptide Deformylase, a New Anticancer Target of Actinonin-Based Antibiotics Mona D
Research article Human mitochondrial peptide deformylase, a new anticancer target of actinonin-based antibiotics Mona D. Lee,1,2 Yuhong She,1 Michael J. Soskis,3 Christopher P. Borella,4 Jeffrey R. Gardner,1 Paula A. Hayes,1 Benzon M. Dy,1 Mark L. Heaney,5 Mark R. Philips,3 William G. Bornmann,4 Francis M. Sirotnak,1,2 and David A. Scheinberg1,2,5 1Department of Molecular Pharmacology and Chemistry, Memorial Sloan-Kettering Cancer Center, New York, New York, USA. 2Department of Pharmacology, Weill Graduate School of Medical Sciences of Cornell University, New York, New York, USA. 3Department of Medicine, New York University School of Medicine, New York, New York, USA. 4Organic Synthesis Core Facility, and 5Department of Medicine, Memorial Sloan-Kettering Cancer Center, New York, New York, USA. Peptide deformylase activity was thought to be limited to ribosomal protein synthesis in prokaryotes, where new peptides are initiated with an N-formylated methionine. We describe here a new human peptide defor- mylase (Homo sapiens PDF, or HsPDF) that is localized to the mitochondria. HsPDF is capable of removing formyl groups from N-terminal methionines of newly synthesized mitochondrial proteins, an activity previ- ously not thought to be necessary in mammalian cells. We show that actinonin, a peptidomimetic antibiotic that inhibits HsPDF, also inhibits the proliferation of 16 human cancer cell lines. We designed and synthesized 33 chemical analogs of actinonin; all of the molecules with potent activity against HsPDF also inhibited tumor cell growth, and vice versa, confirming target specificity. Small interfering RNA inhibition of HsPDF protein expression was also antiproliferative. -
Development of a New Hyaluronic Acid Based Redox-Responsive Nanohydrogel for the Encapsulation of Oncolytic Viruses for Cancer Immunotherapy
nanomaterials Article Development of a New Hyaluronic Acid Based Redox-Responsive Nanohydrogel for the Encapsulation of Oncolytic Viruses for Cancer Immunotherapy Siyuan Deng 1, Alessandra Iscaro 2, Giorgia Zambito 3,4, Yimin Mijiti 5 , Marco Minicucci 5 , Magnus Essand 6, Clemens Lowik 3,4 , Munitta Muthana 2, Roberta Censi 1, Laura Mezzanotte 3,4 and Piera Di Martino 1,* 1 School of Pharmacy, University of Camerino, Via S. Agostino 1, 62032 Camerino, Italy; [email protected] (S.D.); [email protected] (R.C.) 2 Medical School, University of Sheffield, Beech Hill Road, Sheffield S10 2RX, UK; [email protected] (A.I.); m.muthana@sheffield.ac.uk (M.M.) 3 Department of Radiology and Nuclear Medicine, Erasmus Medical Center, 3015 GD Rotterdam, The Netherlands; [email protected] (G.Z.); [email protected] (C.L.); [email protected] (L.M.) 4 Department of Molecular Genetics, Erasmus Medical Center, 3015 GD Rotterdam, The Netherlands 5 Physics Division, School of Science and Technology, University of Camerino, Via Madonna delle Carceri 9, 62032 Camerino, Italy; [email protected] (Y.M.); [email protected] (M.M.) 6 Department of Immunology, Genetics and Pathology, Uppsala University, SE-751 85 Uppsala, Sweden; [email protected] * Correspondence: [email protected]; Tel.: +39-0737-40-2215 Abstract: Oncolytic viruses (OVs) are emerging as promising and potential anti-cancer thera- peutic agents, not only able to kill cancer cells directly by selective intracellular viral replication, Citation: Deng, S.; Iscaro, A.; but also to promote an immune response against tumor. Unfortunately, the bioavailability Zambito, G.; Mijiti, Y.; Minicucci, M.; under systemic administration of OVs is limited because of undesired inactivation caused by Essand, M.; Lowik, C.; Muthana, M.; host immune system and neutralizing antibodies in the bloodstream. -
Effect of Erufosine on Membrane Lipid Order in Breast Cancer Cell Models
biomolecules Article Effect of Erufosine on Membrane Lipid Order in Breast Cancer Cell Models 1, 1, 2 1 Rumiana Tzoneva y, Tihomira Stoyanova y, Annett Petrich , Desislava Popova , Veselina Uzunova 1 , Albena Momchilova 1 and Salvatore Chiantia 2,* 1 Bulgarian Academy of Sciences, Institute of Biophysics and Biomedical Engineering, 1113 Sofia, Bulgaria; [email protected] (R.T.); [email protected] (T.S.); [email protected] (D.P.); [email protected] (V.U.); [email protected] (A.M.) 2 Institute of Biochemistry and Biology, University of Potsdam, Karl-Liebknecht-Street 24-25, 14476 Potsdam, Germany; [email protected] * Correspondence: [email protected]; Tel.: +49-331-9775872 These author contribute equally to this work. y Received: 2 April 2020; Accepted: 19 May 2020; Published: 22 May 2020 Abstract: Alkylphospholipids are a novel class of antineoplastic drugs showing remarkable therapeutic potential. Among them, erufosine (EPC3) is a promising drug for the treatment of several types of tumors. While EPC3 is supposed to exert its function by interacting with lipid membranes, the exact molecular mechanisms involved are not known yet. In this work, we applied a combination of several fluorescence microscopy and analytical chemistry approaches (i.e., scanning fluorescence correlation spectroscopy, line-scan fluorescence correlation spectroscopy, generalized polarization imaging, as well as thin layer and gas chromatography) to quantify the effect of EPC3 in biophysical models of the plasma membrane, as well as in cancer cell lines. Our results indicate that EPC3 affects lipid–lipid interactions in cellular membranes by decreasing lipid packing and increasing membrane disorder and fluidity. As a consequence of these alterations in the lateral organization of lipid bilayers, the diffusive dynamics of membrane proteins are also significantly increased.