Microbial Extracellular Polymeric Substances: Production, Isolation and Applications
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A Plasmid Vector with a Selectable Marker for Halophilic Archaebacteria MELISSA L
JOURNAL OF BACTERIOLOGY, Feb. 1990, p. 756-761 Vol. 172, No. 2 0021-9193/90/020756-06$02.00/0 Copyright © 1990, American Society for Microbiology A Plasmid Vector with a Selectable Marker for Halophilic Archaebacteria MELISSA L. HOLMES* AND MICHAEL L. DYALL-SMITH Department of Microbiology, University of Melbourne, Parkville, Victoria 3052, Australia Received 25 May 1989/Accepted 10 November 1989 A mutant resistant to the gyrase inhibitor novobiocin was selected from a halophilic archaebacterium belonging to the genus Haloferax. Chromosomal DNA from this mutant was able to transform wild-type ceils to novobiocin resistance, and these transformants formed visible colonies in 3 to 4 days on selective plates. The resistance gene was isolated on a 6.7-kilobase DNA KpnI fragment, which was inserted into a cryptic multicopy plasmid (pHK2) derived from the same host strain. The recombinant plasmid transformed wild-type cells at a high efficiency (>106/pg), was stably maintained, and could readily be reisolated from transformants. It could also transform Halobacterium volcanii and appears to be a useful system for genetic analysis in halophilic archaebacteria. Archaebacteria are phylogenetically distinct from eubac- cle was the lack of selectable traits, such as antibiotic teria and eucaryotes and can be broadly divided into three resistance. groups: methanogens, sulfur-dependent thermoacidophiles, The aim of this study was to find a selectable marker for and extreme halophiles (for a review, see reference 22). use in constructing plasmid vectors suitable for isolating and Numerous halobacteria have been isolated from hypersaline studying genes in halobacteria. We report the successful environments around the world, but it is only recently that construction of such a vector by using a gene conferring their taxonomy has been analyzed in a rigorous and compre- resistance to novobiocin and a cryptic plasmid from Halo- hensive fashion. -
An Introduction to Fast Dissolving Oral Thin Film Drug Delivery Systems: a Review
Muthadi Radhika Reddy /J. Pharm. Sci. & Res. Vol. 12(7), 2020, 925-940 An Introduction to Fast Dissolving Oral Thin Film Drug Delivery Systems: A Review Muthadi Radhika Reddy1* 1School of pharmacy, Gurunanak Institute of Technical Campus, Hyderabad, Telangana, India and Department of Pharmacy, Gandhi Institute of Technology and Management University, Vizag, Andhra Pradesh, India INTRODUCTION 2. Useful in situations where rapid onset of action Fast dissolving drug delivery systems were first developed required such as in motion sickness, allergic attack, in the late 1970s as an alternative to conventional dosage coughing or asthma forms. These systems consist of solid dosage forms that 3. Has wide range of applications in pharmaceuticals, Rx disintegrate and dissolve quickly in the oral cavity without Prescriptions and OTC medications for treating pain, the need of water [1]. Fast dissolving drug delivery cough/cold, gastro-esophageal reflux disease,erectile systems include orally disintegrating tablets (ODTs) and dysfunction, sleep disorders, dietary supplements, etc oral thin films (OTFs). The Centre for Drug Evaluation [4] and Research (CDER) defines ODTs as,“a solid dosage 4. No water is required for the administration and hence form containing medicinal substances which disintegrates suitable during travelling rapidly, usually within a matter of seconds, when placed 5. Some drugs are absorbed from the mouth, pharynx upon the tongue” [2]. USFDA defines OTFs as, “a thin, and esophagus as the saliva passes down into the flexible, non-friable polymeric film strip containing one or stomach, enhancing bioavailability of drugs more dispersed active pharmaceutical ingredients which is 6. May offer improved bioavailability for poorly water intended to be placed on the tongue for rapid soluble drugs by offering large surface area as it disintegration or dissolution in the saliva prior to disintegrates and dissolves rapidly swallowing for delivery into the gastrointestinal tract” [3]. -
Diversity of Halophilic Archaea in Fermented Foods and Human Intestines and Their Application Han-Seung Lee1,2*
J. Microbiol. Biotechnol. (2013), 23(12), 1645–1653 http://dx.doi.org/10.4014/jmb.1308.08015 Research Article Minireview jmb Diversity of Halophilic Archaea in Fermented Foods and Human Intestines and Their Application Han-Seung Lee1,2* 1Department of Bio-Food Materials, College of Medical and Life Sciences, Silla University, Busan 617-736, Republic of Korea 2Research Center for Extremophiles, Silla University, Busan 617-736, Republic of Korea Received: August 8, 2013 Revised: September 6, 2013 Archaea are prokaryotic organisms distinct from bacteria in the structural and molecular Accepted: September 9, 2013 biological sense, and these microorganisms are known to thrive mostly at extreme environments. In particular, most studies on halophilic archaea have been focused on environmental and ecological researches. However, new species of halophilic archaea are First published online being isolated and identified from high salt-fermented foods consumed by humans, and it has September 10, 2013 been found that various types of halophilic archaea exist in food products by culture- *Corresponding author independent molecular biological methods. In addition, even if the numbers are not quite Phone: +82-51-999-6308; high, DNAs of various halophilic archaea are being detected in human intestines and much Fax: +82-51-999-5458; interest is given to their possible roles. This review aims to summarize the types and E-mail: [email protected] characteristics of halophilic archaea reported to be present in foods and human intestines and pISSN 1017-7825, eISSN 1738-8872 to discuss their application as well. Copyright© 2013 by The Korean Society for Microbiology Keywords: Halophilic archaea, fermented foods, microbiome, human intestine, Halorubrum and Biotechnology Introduction Depending on the optimal salt concentration needed for the growth of strains, halophilic microorganisms can be Archaea refer to prokaryotes that used to be categorized classified as halotolerant (~0.3 M), halophilic (0.2~2.0 M), as archaeabacteria, a type of bacteria, in the past. -
GRAS Notice 000099: Pullulan
United States Department of Agriculture Agricultural Marketing Service | National Organic Program Document Cover Sheet https://www.ams.usda.gov/rules-regulations/organic/national-list/petitioned Document Type: ☒ National List Petition or Petition Update A petition is a request to amend the USDA National Organic Program’s National List of Allowed and Prohibited Substances (National List). Any person may submit a petition to have a substance evaluated by the National Organic Standards Board (7 CFR 205.607(a)). Guidelines for submitting a petition are available in the NOP Handbook as NOP 3011, National List Petition Guidelines. Petitions are posted for the public on the NOP website for Petitioned Substances. ☐ Technical Report A technical report is developed in response to a petition to amend the National List. Reports are also developed to assist in the review of substances that are already on the National List. Technical reports are completed by third-party contractors and are available to the public on the NOP website for Petitioned Substances. Contractor names and dates completed are available in the report. January 31, 2018 National List Manager USDA/AMS/NOP, Standards Division 1400 Independence Ave. SW Room 2648-So., Ag Stop 0268 Washington, DC 20250-0268 RE: Petition to add Pullulan to the National List at §205.605(a) as an allowed nonsynthetic ingredient in tablets and capsules for dietary supplements labeled “made with organic (specified ingredients or food group(s)).” Dear National List Manager: The Organic Trade Association1 is -
Characterization of the First Cultured Representative of Verrucomicrobia Subdivision 5 Indicates the Proposal of a Novel Phylum
The ISME Journal (2016) 10, 2801–2816 OPEN © 2016 International Society for Microbial Ecology All rights reserved 1751-7362/16 www.nature.com/ismej ORIGINAL ARTICLE Characterization of the first cultured representative of Verrucomicrobia subdivision 5 indicates the proposal of a novel phylum Stefan Spring1, Boyke Bunk2, Cathrin Spröer3, Peter Schumann3, Manfred Rohde4, Brian J Tindall1 and Hans-Peter Klenk1,5 1Department Microorganisms, Leibniz Institute DSMZ-German Collection of Microorganisms and Cell Cultures, Braunschweig, Germany; 2Department Microbial Ecology and Diversity Research, Leibniz Institute DSMZ-German Collection of Microorganisms and Cell Cultures, Braunschweig, Germany; 3Department Central Services, Leibniz Institute DSMZ-German Collection of Microorganisms and Cell Cultures, Braunschweig, Germany and 4Central Facility for Microscopy, Helmholtz-Centre of Infection Research, Braunschweig, Germany The recently isolated strain L21-Fru-ABT represents moderately halophilic, obligately anaerobic and saccharolytic bacteria that thrive in the suboxic transition zones of hypersaline microbial mats. Phylogenetic analyses based on 16S rRNA genes, RpoB proteins and gene content indicated that strain L21-Fru-ABT represents a novel species and genus affiliated with a distinct phylum-level lineage originally designated Verrucomicrobia subdivision 5. A survey of environmental 16S rRNA gene sequences revealed that members of this newly recognized phylum are wide-spread and ecologically important in various anoxic environments ranging from hypersaline sediments to wastewater and the intestine of animals. Characteristic phenotypic traits of the novel strain included the formation of extracellular polymeric substances, a Gram-negative cell wall containing peptidoglycan and the absence of odd-numbered cellular fatty acids. Unusual metabolic features deduced from analysis of the genome sequence were the production of sucrose as osmoprotectant, an atypical glycolytic pathway lacking pyruvate kinase and the synthesis of isoprenoids via mevalonate. -
Pullulan Handling/Processing 1 2 Identification of Petitioned Substance
United States Department of Agriculture Agricultural Marketing Service | National Organic Program Document Cover Sheet https://www.ams.usda.gov/rules-regulations/organic/national-list/petitioned Document Type: ☐ National List Petition or Petition Update A petition is a request to amend the USDA National Organic Program’s National List of Allowed and Prohibited Substances (National List). Any person may submit a petition to have a substance evaluated by the National Organic Standards Board (7 CFR 205.607(a)). Guidelines for submitting a petition are available in the NOP Handbook as NOP 3011, National List Petition Guidelines. Petitions are posted for the public on the NOP website for Petitioned Substances. ☒ Technical Report A technical report is developed in response to a petition to amend the National List. Reports are also developed to assist in the review of substances that are already on the National List. Technical reports are completed by third-party contractors and are available to the public on the NOP website for Petitioned Substances. Contractor names and dates completed are available in the report. Pullulan Handling/Processing 1 2 Identification of Petitioned Substance 3 Chemical Names: CAS Number: 4 5-[[3,4-dihydroxy-6-(hydroxymethyl)-5-[[3,4,5- 9057-02-7 5 trihydroxy-6-(methoxymethyl)oxan-2-yl] 6 methoxymethyl]oxan-2-yl]methoxymethyl]-6- EC/EINECS Number: 7 (hydroxymethyl)oxane-2,3,4-triol (IUPAC) 232-945-1 8 9 Other Name: Other Codes: 10 Pullulan [National Formulary] PubChem CID: 92024139 11 Polymaltotriose EPA Chem. Sub. Inventory Nos.: 1224323-71-0, 12 152743-43-6; 58252-16-7; 58391-35-8 13 Trade Name: INS No. -
The Role of Stress Proteins in Haloarchaea and Their Adaptive Response to Environmental Shifts
biomolecules Review The Role of Stress Proteins in Haloarchaea and Their Adaptive Response to Environmental Shifts Laura Matarredona ,Mónica Camacho, Basilio Zafrilla , María-José Bonete and Julia Esclapez * Agrochemistry and Biochemistry Department, Biochemistry and Molecular Biology Area, Faculty of Science, University of Alicante, Ap 99, 03080 Alicante, Spain; [email protected] (L.M.); [email protected] (M.C.); [email protected] (B.Z.); [email protected] (M.-J.B.) * Correspondence: [email protected]; Tel.: +34-965-903-880 Received: 31 July 2020; Accepted: 24 September 2020; Published: 29 September 2020 Abstract: Over the years, in order to survive in their natural environment, microbial communities have acquired adaptations to nonoptimal growth conditions. These shifts are usually related to stress conditions such as low/high solar radiation, extreme temperatures, oxidative stress, pH variations, changes in salinity, or a high concentration of heavy metals. In addition, climate change is resulting in these stress conditions becoming more significant due to the frequency and intensity of extreme weather events. The most relevant damaging effect of these stressors is protein denaturation. To cope with this effect, organisms have developed different mechanisms, wherein the stress genes play an important role in deciding which of them survive. Each organism has different responses that involve the activation of many genes and molecules as well as downregulation of other genes and pathways. Focused on salinity stress, the archaeal domain encompasses the most significant extremophiles living in high-salinity environments. To have the capacity to withstand this high salinity without losing protein structure and function, the microorganisms have distinct adaptations. -
Fast Dissolving Electrospun Nanofibers Fabricated from Jelly
polymers Article Fast Dissolving Electrospun Nanofibers Fabricated from Jelly Fig Polysaccharide/Pullulan for Drug Delivery Applications Thangavel Ponrasu 1, Bei-Hsin Chen 1, Tzung-Han Chou 1, Jia-Jiuan Wu 2 and Yu-Shen Cheng 1,* 1 Department of Chemical and Materials Engineering, National Yunlin University of Science and Technology, Douliu, Yunlin 64002, Taiwan; [email protected] (T.P.); [email protected] (B.-H.C.); [email protected] (T.-H.C.) 2 Department of Nutrition, China Medical University, Hsueh-Shih Road No. 91, Taichung 404, Taiwan; [email protected] * Correspondence: [email protected]; Tel.: +886-5534-2601 (ext. 4627) Abstract: The fast-dissolving drug delivery systems (FDDDSs) are developed as nanofibers using food-grade water-soluble hydrophilic biopolymers that can disintegrate fast in the oral cavity and deliver drugs. Jelly fig polysaccharide (JFP) and pullulan were blended to prepare fast-dissolving nanofiber by electrospinning. The continuous and uniform nanofibers were produced from the solution of 1% (w/w) JFP, 12% (w/w) pullulan, and 1 wt% Triton X-305. The SEM images confirmed that the prepared nanofibers exhibited uniform morphology with an average diameter of 144 ± 19 nm. The inclusion of JFP in pullulan was confirmed by TGA and FTIR studies. XRD analysis revealed that the increased crystallinity of JFP/pullulan nanofiber was observed due to the formation of intermolecular hydrogen bonds. The tensile strength and water vapor permeability of the JFP/pullulan nanofiber membrane were also enhanced considerably compared to pullulan nanofiber. The JFP/pullulan nanofibers loaded with hydrophobic model drugs like ampicillin and dexamethasone were rapidly dissolved in water within 60 s and release the encapsulants dispersive into the surrounding. -
Pullulan: Production and Usage in Food Industry
African Journal of Food Science and Technology (ISSN: 2141-5455) Vol. 4(3) pp. 57-63, March, 2013 Available Online http://www.interesjournals.org/AJFST Copyright©2013 International Research Journals Full Length Research Paper Pullulan: Production and usage in food ındustry Pınar Oğuzhan and Filiz Yangılar Ardahan University, The Faculty of Engineering, Food Engineering Department, Ardahan, Turkey Accepted March 12,213 Pullulan is one of such polymers synthesized by the yeast-like fungus Aureobasidium pullulans . Pullulan is a linear ααα-D-glucan built of maltotriose subunits, connected by (1-6)-ααα-D-glucosidic linkages. Pullulan is an important exopolysaccharide having applications in several industrial sectors like pharmaceutical, food and cosmetic industries. In addition to recently pullulan is also being investigated for its biomedical applications in various aspects like targeted drug and gene delivery, tissue engineering, wound healing and in diagnostic imaging using quantum dots. Pullulan is being used extensively in the food industry as a food ingredient for over 20 years in Japan, and has Generally Regarded As Safe (GRAS) status in the USA. Pullulan, which is generally materialized with microbial origin in food the production has widely usage as a coating agent in food formulations and packaging industry owing to its numerous properties. Despite the large number of uses, some of the problems associated with fermentative production of pullulan are (i) the formation of a melanin pigment; (ii) the inhibitory effects caused by high sugar concentrations in the medium; and (iii) the high cost associated with pullulan precipitation and recovery. In this review, general properties of pullulan, pullulan production, usage of pullulan in food industry were examined. -
Across the Tree of Life, Radiation Resistance Is Governed By
Across the tree of life, radiation resistance is PNAS PLUS + governed by antioxidant Mn2 , gauged by paramagnetic resonance Ajay Sharmaa,1, Elena K. Gaidamakovab,c,1, Olga Grichenkob,c, Vera Y. Matrosovab,c, Veronika Hoekea, Polina Klimenkovab,c, Isabel H. Conzeb,d, Robert P. Volpeb,c, Rok Tkavcb,c, Cene Gostincarˇ e, Nina Gunde-Cimermane, Jocelyne DiRuggierof, Igor Shuryakg, Andrew Ozarowskih, Brian M. Hoffmana,i,2, and Michael J. Dalyb,2 aDepartment of Chemistry, Northwestern University, Evanston, IL 60208; bDepartment of Pathology, Uniformed Services University of the Health Sciences, Bethesda, MD 20814; cHenry M. Jackson Foundation for the Advancement of Military Medicine, Bethesda, MD 20817; dDepartment of Biology, University of Bielefeld, Bielefeld, 33615, Germany; eDepartment of Biology, Biotechnical Faculty, University of Ljubljana, Ljubljana, SI-1000, Slovenia; fDepartment of Biology, Johns Hopkins University, Baltimore, MD 21218; gCenter for Radiological Research, Columbia University, New York, NY 10032; hNational High Magnetic Field Laboratory, Florida State University, Tallahassee, FL 32306; and iDepartment of Molecular Biosciences, Northwestern University, Evanston, IL 60208 Contributed by Brian M. Hoffman, September 15, 2017 (sent for review August 1, 2017; reviewed by Valeria Cizewski Culotta and Stefan Stoll) Despite concerted functional genomic efforts to understand the agents of cellular damage. In particular, irradiated cells rapidly form •− complex phenotype of ionizing radiation (IR) resistance, a genome superoxide (O2 ) ions by radiolytic reduction of both atmospheric sequence cannot predict whether a cell is IR-resistant or not. Instead, O2 and O2 released through the intracellular decomposition of IR- we report that absorption-display electron paramagnetic resonance generated H2O2 ascatalyzedbybothenzymaticandnonenzymatic (EPR) spectroscopy of nonirradiated cells is highly diagnostic of IR •− metal ions. -
Potential Biotechnological Applications of Cyanobacterial Exopolysaccharides
Vol.64: e21200401, 2021 https://doi.org/10.1590/1678-4324-2021200401 ISSN 1678-4324 Online Edition Review - Agriculture, Agribusiness and Biotechnology Potential Biotechnological Applications of Cyanobacterial Exopolysaccharides Laxmi Parwani1* https://orcid.org/0000-0001-7627-599X Medha Bhatt1 https://orcid.org/0000-0002-2411-8172 Jaspreet Singh2 https://orcid.org/0000-0003-2470-3280 1Banasthali Vidyapith, Department of Bioscience and Biotechnology, P.O. Banasthali, Rajasthan, India; 2 Jaipur National University, SIILAS Campus, School of Life Sciences, Jaipur, Rajasthan, India. Editor-in-Chief: Paulo Vitor Farago Associate Editor: Aline Alberti Received: 2020.06.24; Accepted: 2021.02.24. *Correspondence: [email protected]; Tel.: +91-9982216197 HIGHLIGHTS Illustration of various important fields of biotechnology where cyanobacterial exopolysaccharides are potentially useful. Discussion of research gaps and new opportunities to make the biomaterial suitable for industrial uses. Abstract: The cyanobacterial exopolysaccharides (EPSs) are considered as one of the important group of biopolymers having significant ecological, industrial, and biotechnological importance. Cyanobacteria are regarded as a very abundant source of structurally diverse, high molecular weight polysaccharides having variable composition and roles according to the organisms and the environmental conditions in which they are produced. Due to their structural complexity, versatility and valuable biological properties, they are now emerging as high-value compounds. -
Determination of Hydrolytic Enzyme Capabilities of Halophilic Archaea Isolated from Hides and Skins and Their Phenotypic and Phylogenetic Identification by S
33 DETERMinATION OF HYDROLYTic ENZYME CAPABILITIES OF HALOPHILIC ARCHAEA ISOLATED FROM HIDES AND SKins AND THEIR PHENOTYpic AND PHYLOGENETic IDENTIFicATION by S. T. B LG School of Health, Canakkale Onsekiz Mart University, Terzioglu Campus Canakkale, Turkey, 17100. and B. MER ÇL YaPiCi Biology Department, Faculty of Arts and Science, Canakkale ONSEKIZ MART UNIVERSITY, TERZIOGLU CAMPUS, Canakkale, Turkey, 17100. and İsmail Karaboz Basic and Industrial Microbiology Section, Biology Department, Faculty of Science, Ege University, Bornova, İzmi r, Turkey, 35100. ABSTRACT INTRODUCTION This research aims to isolate extremely halophilic archaea The main constituent of the raw hide is protein, mainly from salted hides, to determine the capacities of their collagen (33% w/w), and remainder is moisture and fat. During hydrolytic enzymes, and to identify them by using phenotypic storage of raw hide, collagen’s excessive proteolysis by and molecular methods. Domestic and imported salted hide lysosomal autolysis or proteolytic bacterial enzymes can lead and skin samples obtained from eight different sources were to the disintegration of the structure of collagen fibers.1 used as the research material. 186 extremely halophilic Biodeterioration is among the major causes of impairment of microorganisms were isolated from salted raw hides and aesthetic, functional and other properties of leather and other skins. Some biochemical, antibiotic sensitivity, pH, NaCl, biopolymers or organic materials and the products made from temperature tolerance and quantitative and qualitative them. Due to the fact that prevention of biological degradation hydrolytic enzyme tests were performed on these isolates. In is very important in conservation and processing of leather, our study, taking into account the phenotypic findings of the great effort is being made for decontamination of these research, 34 of 186 isolates were selected.