Causes and Consequences of Chromosome Segregation Error in Preimplantation Embryos
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Timing of Centrosome Separation Is Important for Accurate Chromosome Segregation
M BoC | ARTICLE Timing of centrosome separation is important for accurate chromosome segregation William T. Silkwortha, Isaac K. Nardia,*, Raja Paulb, Alex Mogilnerc, and Daniela Ciminia aDepartment of Biological Sciences, Virginia Tech, Blacksburg, VA 24061; bIndian Association for the Cultivation of Science, Jadavpur, Kolkata 700032, India; cDepartment of Neurobiology, Physiology and Behavior and Department of Mathematics, University of California, Davis, Davis, CA 95616 ABSTRACT Spindle assembly, establishment of kinetochore attachment, and sister chroma- Monitoring Editor tid separation must occur during mitosis in a highly coordinated fashion to ensure accurate Yixian Zheng chromosome segregation. In most vertebrate cells, the nuclear envelope must break down to Carnegie Institution allow interaction between microtubules of the mitotic spindle and the kinetochores. It was Received: Feb 2, 2011 previously shown that nuclear envelope breakdown (NEB) is not coordinated with centrosome Revised: Nov 17, 2011 separation and that centrosome separation can be either complete at the time of NEB or can Accepted: Nov 22, 2011 be completed after NEB. In this study, we investigated whether the timing of centrosome separation affects subsequent mitotic events such as establishment of kinetochore attach- ment or chromosome segregation. We used a combination of experimental and computa- tional approaches to investigate kinetochore attachment and chromosome segregation in cells with complete versus incomplete spindle pole separation at NEB. We found that cells with incomplete spindle pole separation exhibit higher rates of kinetochore misattachments and chromosome missegregation than cells that complete centrosome separation before NEB. Moreover, our mathematical model showed that two spindle poles in close proximity do not “search” the entire cellular space, leading to formation of large numbers of syntelic at- tachments, which can be an intermediate stage in the formation of merotelic kinetochores. -
From Bipotent Neuromesodermal Progenitors to Neural-Mesodermal Interactions During Embryonic Development
International Journal of Molecular Sciences Review From Bipotent Neuromesodermal Progenitors to Neural-Mesodermal Interactions during Embryonic Development Nitza Kahane and Chaya Kalcheim * Department of Medical Neurobiology, Institute of Medical Research Israel-Canada (IMRIC) and the Edmond and Lily Safra Center for Brain Sciences (ELSC), Hebrew University of Jerusalem-Hadassah Medical School, P.O. Box 12272, Jerusalem 9112102, Israel; [email protected] * Correspondence: [email protected] Abstract: To ensure the formation of a properly patterned embryo, multiple processes must operate harmoniously at sequential phases of development. This is implemented by mutual interactions between cells and tissues that together regulate the segregation and specification of cells, their growth and morphogenesis. The formation of the spinal cord and paraxial mesoderm derivatives exquisitely illustrate these processes. Following early gastrulation, while the vertebrate body elongates, a pop- ulation of bipotent neuromesodermal progenitors resident in the posterior region of the embryo generate both neural and mesodermal lineages. At later stages, the somitic mesoderm regulates aspects of neural patterning and differentiation of both central and peripheral neural progenitors. Reciprocally, neural precursors influence the paraxial mesoderm to regulate somite-derived myogen- esis and additional processes by distinct mechanisms. Central to this crosstalk is the activity of the axial notochord, which, via sonic hedgehog signaling, plays pivotal roles in neural, skeletal muscle and cartilage ontogeny. Here, we discuss the cellular and molecular basis underlying this complex Citation: Kahane, N.; Kalcheim, C. developmental plan, with a focus on the logic of sonic hedgehog activities in the coordination of the From Bipotent Neuromesodermal Progenitors to Neural-Mesodermal neural-mesodermal axis. -
“Salivary Gland Cellular Architecture in the Asian Malaria Vector Mosquito Anopheles Stephensi”
Wells and Andrew Parasites & Vectors (2015) 8:617 DOI 10.1186/s13071-015-1229-z RESEARCH Open Access “Salivary gland cellular architecture in the Asian malaria vector mosquito Anopheles stephensi” Michael B. Wells and Deborah J. Andrew* Abstract Background: Anopheles mosquitoes are vectors for malaria, a disease with continued grave outcomes for human health. Transmission of malaria from mosquitoes to humans occurs by parasite passage through the salivary glands (SGs). Previous studies of mosquito SG architecture have been limited in scope and detail. Methods: We developed a simple, optimized protocol for fluorescence staining using dyes and/or antibodies to interrogate cellular architecture in Anopheles stephensi adult SGs. We used common biological dyes, antibodies to well-conserved structural and organellar markers, and antibodies against Anopheles salivary proteins to visualize many individual SGs at high resolution by confocal microscopy. Results: These analyses confirmed morphological features previously described using electron microscopy and uncovered a high degree of individual variation in SG structure. Our studies provide evidence for two alternative models for the origin of the salivary duct, the structure facilitating parasite transport out of SGs. We compare SG cellular architecture in An. stephensi and Drosophila melanogaster, a fellow Dipteran whose adult SGs are nearly completely unstudied, and find many conserved features despite divergence in overall form and function. Anopheles salivary proteins previously observed at the basement membrane were localized either in SG cells, secretory cavities, or the SG lumen. Our studies also revealed a population of cells with characteristics consistent with regenerative cells, similar to muscle satellite cells or midgut regenerative cells. Conclusions: This work serves as a foundation for linking Anopheles stephensi SG cellular architecture to function and as a basis for generating and evaluating tools aimed at preventing malaria transmission at the level of mosquito SGs. -
GENETICS and GENOMICS Ed
GENETICS AND GENOMICS Ed. Csaba Szalai, PhD GENETICS AND GENOMICS Editor: Csaba Szalai, PhD, university professor Authors: Chapter 1: Valéria László Chapter 2, 3, 4, 6, 7: Sára Tóth Chapter 5: Erna Pap Chapter 8, 9, 10, 11, 12, 13, 14: Csaba Szalai Chapter 15: András Falus and Ferenc Oberfrank Keywords: Mitosis, meiosis, mutations, cytogenetics, epigenetics, Mendelian inheritance, genetics of sex, developmental genetics, stem cell biology, oncogenetics, immunogenetics, human genomics, genomics of complex diseases, genomic methods, population genetics, evolution genetics, pharmacogenomics, nutrigenetics, gene environmental interaction, systems biology, bioethics. Summary The book contains the substance of the lectures and partly of the practices of the subject of ‘Genetics and Genomics’ held in Semmelweis University for medical, pharmacological and dental students. The book does not contain basic genetics and molecular biology, but rather topics from human genetics mainly from medical point of views. Some of the 15 chapters deal with medical genetics, but the chapters also introduce to the basic knowledge of cell division, cytogenetics, epigenetics, developmental genetics, stem cell biology, oncogenetics, immunogenetics, population genetics, evolution genetics, nutrigenetics, and to a relative new subject, the human genomics and its applications for the study of the genomic background of complex diseases, pharmacogenomics and for the investigation of the genome environmental interactions. As genomics belongs to sytems biology, a chapter introduces to basic terms of systems biology, and concentrating on diseases, some examples of the application and utilization of this scientific field are also be shown. The modern human genetics can also be associated with several ethical, social and legal issues. The last chapter of this book deals with these issues. -
The Intestinal Protozoa
The Intestinal Protozoa A. Introduction 1. The Phylum Protozoa is classified into four major subdivisions according to the methods of locomotion and reproduction. a. The amoebae (Superclass Sarcodina, Class Rhizopodea move by means of pseudopodia and reproduce exclusively by asexual binary division. b. The flagellates (Superclass Mastigophora, Class Zoomasitgophorea) typically move by long, whiplike flagella and reproduce by binary fission. c. The ciliates (Subphylum Ciliophora, Class Ciliata) are propelled by rows of cilia that beat with a synchronized wavelike motion. d. The sporozoans (Subphylum Sporozoa) lack specialized organelles of motility but have a unique type of life cycle, alternating between sexual and asexual reproductive cycles (alternation of generations). e. Number of species - there are about 45,000 protozoan species; around 8000 are parasitic, and around 25 species are important to humans. 2. Diagnosis - must learn to differentiate between the harmless and the medically important. This is most often based upon the morphology of respective organisms. 3. Transmission - mostly person-to-person, via fecal-oral route; fecally contaminated food or water important (organisms remain viable for around 30 days in cool moist environment with few bacteria; other means of transmission include sexual, insects, animals (zoonoses). B. Structures 1. trophozoite - the motile vegetative stage; multiplies via binary fission; colonizes host. 2. cyst - the inactive, non-motile, infective stage; survives the environment due to the presence of a cyst wall. 3. nuclear structure - important in the identification of organisms and species differentiation. 4. diagnostic features a. size - helpful in identifying organisms; must have calibrated objectives on the microscope in order to measure accurately. -
Double Mitotic Nondisjunction
J Med Genet: first published as 10.1136/jmg.15.5.395 on 1 October 1978. Downloaded from Case reports 395 well be that, in this family, 18q- is unable to segre- mosaicism. Chromosome 18 trisomy was found gate properly during gametogenesis and early post- only in 18% of lymphocytes and not in skin zygotic mitosis, leading to an unbalanced state and fibroblasts. A likely interpretation is double non- +(18q-). disjunction in a single lymphocyte precursor HAROLD N. BASs, FELICE WEBER-PARISI, AND of a trisomy 21 embryo. A brief review of other ROBERT S. SPARKES cases of mitotic multiple nondisjunction and Department ofPediatrics (Genetics), Kaiser- double aneuploid mosaicism is presented. Permanente Medical Center, Panorama City, California 91402; and Division ofMedical Genetics, Chromosomal mosaicism occurs in a small percentage Departments ofMedicine, Pediatrics, andPsychiatry, of patients with Down's syndrome. The vast majority UCLA Centerfor the Health Sciences, Los Angeles, of these mosaics have a normal cell line in addition to California 90024, USA the trisomy 21 cell line. This report describes the first reported instance, to our knowledge, of an unusual References type of double trisomy mosaicism in lymphocytes Castel, Y., Riviere, D., Nawrocki, T., Le Fur, J-M., and Toudic, involving chromosomes 18 and 21. L. (1975). Trisomie partielie 18q par translocation familiale t(l8q-;13q+). Lyon Medical, 233, 211-217. Francke, U. (1972). Quinacrine mustard fluorescence of human chromosomes: characterization of unusual translocations. Case report American Journal ofHuman Genetics, 24, 189-213. Fujita, K., and Fujita, H. M. (1974). An extra small submetacentric The proposita was referred for chromosome analysis chromosome: possible partial trisomy 18. -
Oecd Guideline for the Testing of Chemicals
474 Adopted: 21st July 1997 OECD GUIDELINE FOR THE TESTING OF CHEMICALS Mammalian Erythrocyte Micronucleus Test INTRODUCTION 1. The mammalian in vivo micronucleus test is used for the detection of damage induced by the test substance to the chromosomes or the mitotic apparatus of erythroblasts by analysis of erythrocytes as sampled in bone marrow and/or peripheral blood cells of animals, usually rodents. 2. The purpose of the micronucleus test is to identify substances that cause cytogenetic damage which results in the formation of micronuclei containing lagging chromosome fragments or whole chromosomes. 3. When a bone marrow erythroblast develops into a polychromatic erythrocyte, the main nucleus is extruded; any micronucleus that has been formed may remain behind in the otherwise anucleated cytoplasm. Visualisation of micronuclei is facilitated in these cells because they lack a main nucleus. An increase in the frequency of micronucleated polychromatic erythrocytes in treated animals is an indication of induced chromosome damage. 4. Definitions used are set out in the Annex. INITIAL CONSIDERATIONS 5. The bone marrow of rodents is routinely used in this test since polychromatic erythrocytes are produced in that tissue. The measurement of micronucleated immature (polychromatic) erythrocytes in peripheral blood is equally acceptable in any species in which the inability of the spleen to remove micronucleated erythrocytes has been demonstrated, or which has shown an adequate sensitivity to detect agents that cause structural or numerical chromosome aberrations. Micronuclei can be distinguished by a number of criteria. These include identification of the presence or absence of a kinetochore or centromeric DNA in the micronuclei. The frequency of micronucleated immature (polychromatic) erythrocytes is the principal endpoint. -
Epigenetic Centromere Specification Directs Aurora B Accumulation but Is Insufficient to Efficiently Correct Mitotic Errors
JCB: Report Epigenetic centromere specification directs aurora B accumulation but is insufficient to efficiently correct mitotic errors Emily A. Bassett,1,2 Stacey Wood,2 Kevan J. Salimian,1,2 Sandya Ajith,1,2 Daniel R. Foltz,3 and Ben E. Black1,2 1Graduate Group in Biochemistry and Molecular Biophysics and 2Department of Biochemistry and Biophysics, School of Medicine, University of Pennsylvania, Philadelphia, PA 19104 3Department of Biochemistry and Molecular Genetics, University of Virginia, Charlottesville, VA 22908 he nearly ubiquitous presence of repetitive centro- of the kinetochore is intact at a human neocentromere mere DNA sequences across eukaryotic species is in lacking repetitive -satellite DNA. However, aurora B is Tparadoxical contrast to their apparent functional dis- inappropriately silenced as a consequence of the altered pensability. Centromeric chromatin is spatially delineated geometry of the neocentromere, thereby compromising into the kinetochore-forming array of centromere protein A the error correction mechanism. This suggests a model (CENP-A)–containing nucleosomes and the inner cen wherein the neocentromere represents a primordial inher- tromeric heterochromatin that lacks CENP-A but recruits itance locus that requires subsequent generation of a the aurora B kinase that is necessary for correcting erro- robust inner centromere compartment to enhance fidelity neous attachments to the mitotic spindle. We found that of chromosome transmission. the self-perpetuating network of CENPs at the foundation Introduction -
Questions from Medical Biology and Genetics in Acad. Year 2019/2020 for 1 St Year Dentistry
Questions from Medical biology and Genetics in acad. year 2019/2020 for 1 st year Dentistry I. The cell 1. Molecular structure of the biological membranes 2. Types of intercellular communications (endocrine, paracrine, autocrine and neural) 3. Types and function of receptors and signal molecules, first and second messengers, amplification of signal 4. Transport through membranes, mechanisms 5. Endoplasmic reticulum, structure and function 6. Ribosomes, their structure and function 7. Golgi complex, its structure, metabolic and distributional function 8. Lysosomes, peroxisomes, proteasomes and their function 9. Function and biogenesis mitochondria, characteristics of its genome 10. Functional organization of the cytoskeleton (microtubules, microfillaments) 11. Centromere, kinetochore, system permitting movement of chromosomes in cell division 12. Mitosis as a part of cell cycle 13. Cell cycle - phases, regulatory molecules, check points 14. Processes taking part in cell cycle regulation, examples 15. G1 check point of cell cycle, factors ruling transfer G1/S in cell cycle 16. G2 check point of cell cycle, factors ruling transfer G2/M in cell cycle 17. Mitotic check point, molecular mechanism of its regulation 18. Relation protooncogene – oncogene in regulation of cell cycle 19. Oncogenesis, molecular characteristics of malignant transformation of cell 20. Types of oncogenes, mechanisms changing protooncogene to oncogene 21. Mechanisms of protooncogens participation in deregulation of cell cycle 22. Nucleus, its structure and function 23. Totipotence of cells, stem cells, tissue engineering and regenerative medicine 24. Alternative usage of genetic information in differentiation of cell 25. Apoptosis - programmed cell death (telomeric sequences) 26. Mechanism of activation of apoptosis through ”death“ receptors 27. Mechanism of activation of apoptosis through mitochondrial pathway 28. -
S2(R1) Genotoxicity Testing and Data Interpretation for Pharmaceuticals Intended for Human Use
Guidance for Industry S2(R1) Genotoxicity Testing and Data Interpretation for Pharmaceuticals Intended for Human Use U.S. Department of Health and Human Services Food and Drug Administration Center for Drug Evaluation and Research (CDER) Center for Biologics Evaluation and Research (CBER) June 2012 ICH Guidance for Industry S2(R1) Genotoxicity Testing and Data Interpretation for Pharmaceuticals Intended for Human Use Additional copies are available from: Office of Communications Division of Drug Information, WO51, Room 2201 Center for Drug Evaluation and Research Food and Drug Administration 10903 New Hampshire Ave., Silver Spring, MD 20993-0002 Phone: 301-796-3400; Fax: 301-847-8714 [email protected] http://www.fda.gov/Drugs/GuidanceComplianceRegulatoryInformation/Guidances/default.htm and/or Office of Communication, Outreach and Development, HFM-40 Center for Biologics Evaluation and Research Food and Drug Administration 1401 Rockville Pike, Rockville, MD 20852-1448 http://www.fda.gov/BiologicsBloodVaccines/GuidanceComplianceRegulatoryInformation/Guidances/default.htm (Tel) 800-835-4709 or 301-827-1800 U.S. Department of Health and Human Services Food and Drug Administration Center for Drug Evaluation and Research (CDER) Center for Biologics Evaluation and Research (CBER) June 2012 ICH Contains Nonbinding Recommendations TABLE OF CONTENTS I. INTRODUCTION (1)....................................................................................................... 1 A. Objectives of the Guidance (1.1)...................................................................................................1 -
Biology Chapter 19 Kingdom Protista Domain Eukarya Description Kingdom Protista Is the Most Diverse of All the Kingdoms
Biology Chapter 19 Kingdom Protista Domain Eukarya Description Kingdom Protista is the most diverse of all the kingdoms. Protists are eukaryotes that are not animals, plants, or fungi. Some unicellular, some multicellular. Some autotrophs, some heterotrophs. Some with cell walls, some without. Didinium protist devouring a Paramecium protist that is longer than it is! Read about it on p. 573! Where Do They Live? • Because of their diversity, we find protists in almost every habitat where there is water or at least moisture! Common Examples • Ameba • Algae • Paramecia • Water molds • Slime molds • Kelp (Sea weed) Classified By: (DON’T WRITE THIS DOWN YET!!! • Mode of nutrition • Cell walls present or not • Unicellular or multicellular Protists can be placed in 3 groups: animal-like, plantlike, or funguslike. Didinium, is a specialist, only feeding on Paramecia. They roll into a ball and form cysts when there is are no Paramecia to eat. Paramecia, on the other hand are generalists in their feeding habits. Mode of Nutrition Depends on type of protist (see Groups) Main Groups How they Help man How they Hurt man Ecosystem Roles KEY CONCEPT Animal-like protists = PROTOZOA, are single- celled heterotrophs that can move. Oxytricha Reproduce How? • Animal like • Unicellular – by asexual reproduction – Paramecium – does conjugation to exchange genetic material Animal-like protists Classified by how they move. macronucleus contractile vacuole food vacuole oral groove micronucleus cilia • Protozoa with flagella are zooflagellates. – flagella help zooflagellates swim – more than 2000 zooflagellates • Some protists move with pseudopods = “false feet”. – change shape as they move –Ex. amoebas • Some protists move with pseudopods. -
Haplotype-Aware Inference of Human Chromosome Abnormalities Daniel Ariad 1*, Stephanie M
bioRxiv preprint doi: https://doi.org/10.1101/2021.05.18.444721; this version posted May 20, 2021. The copyright holder for this preprint (which was not certified by peer review) is the author/funder, who has granted bioRxiv a license to display the preprint in perpetuity. It is made available under aCC-BY-ND 4.0 International license. Ariad et al. Haplotype-aware inference of human chromosome abnormalities Daniel Ariad 1*, Stephanie M. Yan 1, Andrea R. Victor2,FrankL.Barnes2, Christo G. Zouves2, Manuel Viotti 3 and Rajiv C. McCoy 1* Abstract Extra or missing chromosomes—a phenomenon termed aneuploidy—frequently arises during human meiosis and embryonic mitosis and is the leading cause of pregnancy loss, including in the context of in vitro fertilization (IVF). While meiotic aneuploidies a↵ect all cells and are deleterious, mitotic errors generate mosaicism, which may be compatible with healthy live birth. Large-scale abnormalities such as triploidy and haploidy also contribute to adverse pregnancy outcomes, but remain hidden from standard sequencing-based approaches to preimplantation genetic testing (PGT-A). The ability to reliably distinguish meiotic and mitotic aneuploidies, as well as abnormalities in genome-wide ploidy may thus prove valuable for enhancing IVF outcomes. Here, we describe a statistical method for distinguishing these forms of aneuploidy based on analysis of low-coverage whole-genome sequencing data, which is the current standard in the field. Our approach overcomes the sparse nature of the data by leveraging allele frequencies and linkage disequilibrium (LD) measured in a population reference panel. The method, which we term LD-informed PGT-A (LD-PGTA), retains high accuracy down to coverage as low as 0.05 and at higher coverage can also distinguish between meiosis I and meiosis II errors based on signatures⇥ spanning the centromeres.