A New Sponge-Inhabiting Amphipod Species (Crustacea, Gammaridea
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Anchialine Cave Biology in the Era of Speleogenomics Jorge L
International Journal of Speleology 45 (2) 149-170 Tampa, FL (USA) May 2016 Available online at scholarcommons.usf.edu/ijs International Journal of Speleology Off icial Journal of Union Internationale de Spéléologie Life in the Underworld: Anchialine cave biology in the era of speleogenomics Jorge L. Pérez-Moreno1*, Thomas M. Iliffe2, and Heather D. Bracken-Grissom1 1Department of Biological Sciences, Florida International University, Biscayne Bay Campus, North Miami FL 33181, USA 2Department of Marine Biology, Texas A&M University at Galveston, Galveston, TX 77553, USA Abstract: Anchialine caves contain haline bodies of water with underground connections to the ocean and limited exposure to open air. Despite being found on islands and peninsular coastlines around the world, the isolation of anchialine systems has facilitated the evolution of high levels of endemism among their inhabitants. The unique characteristics of anchialine caves and of their predominantly crustacean biodiversity nominate them as particularly interesting study subjects for evolutionary biology. However, there is presently a distinct scarcity of modern molecular methods being employed in the study of anchialine cave ecosystems. The use of current and emerging molecular techniques, e.g., next-generation sequencing (NGS), bestows an exceptional opportunity to answer a variety of long-standing questions pertaining to the realms of speciation, biogeography, population genetics, and evolution, as well as the emergence of extraordinary morphological and physiological adaptations to these unique environments. The integration of NGS methodologies with traditional taxonomic and ecological methods will help elucidate the unique characteristics and evolutionary history of anchialine cave fauna, and thus the significance of their conservation in face of current and future anthropogenic threats. -
Keys to the Hawaiian Marine Gammaridea, 0-30 Meters
J. LAURENS BARNt Keys to the Hawaiian Marine Gammaridea, 0-30 Meters SMITHSONIAN CONTRIBUTIONS TO ZOOLOGY NUMBER 58 SERIAL PUBLICATIONS OF THE SMITHSONIAN INSTITUTION The emphasis upon publications as a means of diffusing knowledge was expressed by the first Secretary of the Smithsonian Institution. In his formal plan for the Insti- tution, Joseph Henry articulated a program that included the following statement: "It is proposed to publish a series of reports, giving an account of the new discoveries in science, and of the changes made from year to year in all branches of knowledge not strictly professional." This keynote of basic research has been adhered to over the years in the issuance of thousands of titles in serial publications under the Smithsonian imprint, commencing with Smithsonian Contributions to Knowledge in 1848 and continuing with the following active series: Smithsonian Annals of Flight Smithsonian Contributions to Anthropology Smithsonian Contributions to Astrophysics Smithsonian Contributions to Botany Smithsonian Contributions to the Earth Sciences Smithsonian Contributions to Paleobiology Smithsonian Contributions to Z0°l°iy Smithsonian Studies in History and Technology In these series, the Institution publishes original articles and monographs dealing with the research and collections of its several museums and offices and of professional colleagues at other institutions of learning. These papers report newly acquired facts, synoptic interpretations of data, or original theory in specialized fields. Each publica- tion is distributed by mailing lists to libraries, laboratories, institutes, and interested specialists throughout the world. Individual copies may be obtained from the Smith- sonian Institution Press as long as stocks are available. S. DILLON RIPLEY Secretary Smithsonian Institution SMITHSONIAN CONTRIBUTIONS TO ZOOLOGY NUMBER 58 j. -
Additions to and Revisions of the Amphipod (Crustacea: Amphipoda) Fauna of South Africa, with a List of Currently Known Species from the Region
Additions to and revisions of the amphipod (Crustacea: Amphipoda) fauna of South Africa, with a list of currently known species from the region Rebecca Milne Department of Biological Sciences & Marine Research Institute, University of CapeTown, Rondebosch, 7700 South Africa & Charles L. Griffiths* Department of Biological Sciences & Marine Research Institute, University of CapeTown, Rondebosch, 7700 South Africa E-mail: [email protected] (with 13 figures) Received 25 June 2013. Accepted 23 August 2013 Three species of marine Amphipoda, Peramphithoe africana, Varohios serratus and Ceradocus isimangaliso, are described as new to science and an additional 13 species are recorded from South Africa for the first time. Twelve of these new records originate from collecting expeditions to Sodwana Bay in northern KwaZulu-Natal, while one is an introduced species newly recorded from Simon’s Town Harbour. In addition, we collate all additions and revisions to the regional amphipod fauna that have taken place since the last major monographs of each group and produce a comprehensive, updated faunal list for the region. A total of 483 amphipod species are currently recognized from continental South Africa and its Exclusive Economic Zone . Of these, 35 are restricted to freshwater habitats, seven are terrestrial forms, and the remainder either marine or estuarine. The fauna includes 117 members of the suborder Corophiidea, 260 of the suborder Gammaridea, 105 of the suborder Hyperiidea and a single described representative of the suborder Ingolfiellidea. -
Evolutionary History of Inversions in the Direction of Architecture-Driven
bioRxiv preprint doi: https://doi.org/10.1101/2020.05.09.085712; this version posted May 10, 2020. The copyright holder for this preprint (which was not certified by peer review) is the author/funder, who has granted bioRxiv a license to display the preprint in perpetuity. It is made available under aCC-BY-NC 4.0 International license. Evolutionary history of inversions in the direction of architecture- driven mutational pressures in crustacean mitochondrial genomes Dong Zhang1,2, Hong Zou1, Jin Zhang3, Gui-Tang Wang1,2*, Ivan Jakovlić3* 1 Key Laboratory of Aquaculture Disease Control, Ministry of Agriculture, and State Key Laboratory of Freshwater Ecology and Biotechnology, Institute of Hydrobiology, Chinese Academy of Sciences, Wuhan 430072, China. 2 University of Chinese Academy of Sciences, Beijing 100049, China 3 Bio-Transduction Lab, Wuhan 430075, China * Corresponding authors Short title: Evolutionary history of ORI events in crustaceans Abbreviations: CR: control region, RO: replication of origin, ROI: inversion of the replication of origin, D-I skew: double-inverted skew, LBA: long-branch attraction bioRxiv preprint doi: https://doi.org/10.1101/2020.05.09.085712; this version posted May 10, 2020. The copyright holder for this preprint (which was not certified by peer review) is the author/funder, who has granted bioRxiv a license to display the preprint in perpetuity. It is made available under aCC-BY-NC 4.0 International license. Abstract Inversions of the origin of replication (ORI) of mitochondrial genomes produce asymmetrical mutational pressures that can cause artefactual clustering in phylogenetic analyses. It is therefore an absolute prerequisite for all molecular evolution studies that use mitochondrial data to account for ORI events in the evolutionary history of their dataset. -
Biodiversity of the Gammaridea and Corophiidea (Crustacea
Biodiversity of the Gammaridea and Corophiidea (Crustacea: Amphipoda) from the Beagle Channel and the Straits of Magellan: a preliminary comparison between their faunas Ignacio L. Chiesa1,2 & Gloria M. Alonso2 1 Laboratorio de Artrópodos, Departamento de Biodiversidad y Biología Experimental, Facultad de Ciencias Exactas y Naturales, Universidad de Buenos Aires, Ciudad Universitaria, C1428EHA, Buenos Aires, Argentina; ichiesa@ bg.fcen.uba.ar 2 Museo Argentino de Ciencias Naturales “Bernardino Rivadavia”, Div. Invertebrados, Av. Ángel Gallardo 470, C1405DJR, Buenos Aires, Argentina; [email protected] Received 10-XI-2005. Corrected 25-IV-2006. Accepted 16-III-2007. Abstract: Gammaridea and Corophiidea amphipod species from the Beagle Channel and the Straits of Magellan were listed for the first time; their faunas were compared on the basis of bibliographic information and material collected in one locality at Beagle Channel (Isla Becasses). The species Schraderia serraticauda and Heterophoxus trichosus (collected at Isla Becasses) were cited for the first time for the Magellan region; Schraderia is the first generic record for this region. A total of 127 species were reported for the Beagle Channel and the Straits of Magellan. Sixty-two species were shared between both passages (71.3 % similarity). The amphipod species represented 34 families and 83 genera. The similarity at genus level was 86.4 %, whereas 23 of the 34 families were present in both areas. For all species, 86 had bathymetric ranges above 100 m and only 12 species ranged below 200 m depth. In the Beagle Channel, only one species had a depth record greater than 150 m, whereas in the Straits of Magellan, 15 had such a record. -
The 17Th International Colloquium on Amphipoda
Biodiversity Journal, 2017, 8 (2): 391–394 MONOGRAPH The 17th International Colloquium on Amphipoda Sabrina Lo Brutto1,2,*, Eugenia Schimmenti1 & Davide Iaciofano1 1Dept. STEBICEF, Section of Animal Biology, via Archirafi 18, Palermo, University of Palermo, Italy 2Museum of Zoology “Doderlein”, SIMUA, via Archirafi 16, University of Palermo, Italy *Corresponding author, email: [email protected] th th ABSTRACT The 17 International Colloquium on Amphipoda (17 ICA) has been organized by the University of Palermo (Sicily, Italy), and took place in Trapani, 4-7 September 2017. All the contributions have been published in the present monograph and include a wide range of topics. KEY WORDS International Colloquium on Amphipoda; ICA; Amphipoda. Received 30.04.2017; accepted 31.05.2017; printed 30.06.2017 Proceedings of the 17th International Colloquium on Amphipoda (17th ICA), September 4th-7th 2017, Trapani (Italy) The first International Colloquium on Amphi- Poland, Turkey, Norway, Brazil and Canada within poda was held in Verona in 1969, as a simple meet- the Scientific Committee: ing of specialists interested in the Systematics of Sabrina Lo Brutto (Coordinator) - University of Gammarus and Niphargus. Palermo, Italy Now, after 48 years, the Colloquium reached the Elvira De Matthaeis - University La Sapienza, 17th edition, held at the “Polo Territoriale della Italy Provincia di Trapani”, a site of the University of Felicita Scapini - University of Firenze, Italy Palermo, in Italy; and for the second time in Sicily Alberto Ugolini - University of Firenze, Italy (Lo Brutto et al., 2013). Maria Beatrice Scipione - Stazione Zoologica The Organizing and Scientific Committees were Anton Dohrn, Italy composed by people from different countries. -
Hadzioidea of the NEP (Equator to Aleutians, Intertidal to Abyss): a Review Donald B
Hadzioidea of the NEP (Equator to Aleutians, intertidal to abyss): a review Donald B. Cadien 31 August 2005 (revised 11Oct 2007) Introduction to the Hadzioidea The superfamily was originally constituted as the Melitoidea (Bousfield 1977). This concept was critiqued by J. L. Barnard and Karaman (1980), and in response Bousfield renamed the group Hadzioidea without changing its composition (Bousfield 1983). Only three families are included in this superfamily, although one of them (Hadziidae) is further divided into three unofficial groups – weckeliids, hadziids, and nuuanids. These were originally included in the broad concept of the gammaroids, but have been separated for several decades. The taxonomic position suggested by Bousfield (2001)is used here, but Barnard and Karaman and others retained them as several groups within the gammaroids s. l.. The discussion of the hadzioids in J. L. Barnard & C. M. Barnard (1983, pp. 137-140, and as “Melita Group” pp. 147-151) may help show how members of this superfamily differ from other gammaroids, and from each other. The first family in the superfamily, the Allocrangonyctidae is confined to freshwater and is not covered here. The remaining two, Hadziidae and Melitidae, are primarily marine, and are both represented in the NEP. Maera sp an undescribed species from Guana Island (Photo Yale Peabody Museum) Diagnosis of the Hadzioidea – “body not carinate nor rostrate, toothed on abdomen only (rarely on peraeon): urosome dorsal spine groups weak or lacking; sexual dimorphism strongly expressed in body size and in gnathopods, and in antenna 2 and peraeopods; antennae 2 lacking calceoli; antennae strongly developed, 1 usually much the longer, peduncular segment 2 elongate; accessory flagellum prominent (occasionally very reduced or lacking); inferior antennal sinus small or sharply incised; eye (when present) basically small, rounded, occasionally reniform. -
From the Persian Gulf, Iran
Zootaxa 3881 (5): 440–452 ISSN 1175-5326 (print edition) www.mapress.com/zootaxa/ Article ZOOTAXA Copyright © 2014 Magnolia Press ISSN 1175-5334 (online edition) http://dx.doi.org/10.11646/zootaxa.3881.5.2 http://zoobank.org/urn:lsid:zoobank.org:pub:FEA77B85-165E-46D0-9A6B-5A2156F9302B New species and new record of hadzioids (Amphipoda: Senticaudata, Hadzioidea) from the Persian Gulf, Iran FARZANEH MOMTAZI1, 3, ALIREZA SARI2 & ABDOLVAHAB MAGHSOUDLOU1 1Iranian National Institute for Oceanography and Atmospheric Science (INIOAS), Tehran, Iran 2School of Biology and Centre of Excellence in Phylogeny of Living Organisms, College of Science, University of Tehran, Tehran, Iran 3Corresponding author. E-mail: [email protected] Abstract New record and new species of the families Melitidae Bousfield, 1973 and Maeridae Krapp-Schickel, 2008 are described from the Iranian shorelines of the Persian Gulf. Melita persia sp. nov. is differentiated from other members of M. zeylanica Stebbing, 1904 group by: the presence of two setae on inner ramus of third uropod, the setal arrangement on the telson, and a recurved proximal lobe of sixth coxa in females. Also, Elasmopus menurte Barnard, 1974 previously described from Western Australia and Mauritius is recorded, for the first time, from Persian Gulf in the north-western Indian Ocean. Key words: Melita persia sp. nov., Elasmopus menurte, Qeshm Island, Iran Introduction The family Maeridae in the superfamily Hadzioidea was established by Krapp-Schickel (2008). Based on a new comprehensive review of amphipod taxonomy and phylogeny by Lowry & Myers (2013) the superfamily Hadzioidea is composed of eight families. The Hadzioidea is characterized by the first antenna longer than second antenna and the peduncle of first uropod with a basofacial robust seta. -
Seven New Amphipods (Crustacea: Peracarida: Gammaridea) from the Caribbean Coast of South America
Bol. Invest Mar. Cost 26 71-104 ISSNOl 22-9761 Santa Marta, Colombia, 1997 SEVEN NEW AMPHIPODS (CRUSTACEA: PERACARIDA: GAMMARIDEA) FROM THE CARIBBEAN COAST OF SOUTH AMERICA Manuel Ortiz and Rafael Lemaitre ABSTRACT A study of gammaridean amphipod samples obtained from coral reefs and estuarine environments soutfi of Cartagena, Colombia, revealed the existence of seven undescribed species. These are described and illustrated in detail under the names: Ampithoe hirsutimanus, Batea schotti, Caribboecetes Justi, Cerapus ttiomasi, Lambos scdostemum, Nasaganaia comisariensis, and Seba mbusta. RESUMEN SIcto Mp*ciM niMvas de anffpodos (Cruatacea: Pvracarlda: Gammaridaa) d* la costa Carib* da SudamMca. Un estudio de muestras de anffpodos gamarldeos obtenldas en zonas corali- nas y estuarinas al sur de Cartagena, Colombia, revel6 la existencia de siete espeoes desconocidas para la ciencia. Estas se describen en detalle bajo los siguientes nombres: Ampithoe hirsutimanus, Batea schotd, Caribboecetes justi, Cerapus thomasi, Lembos scolostemum, Nasagenela comisariensis, y Se<M robusta. INTRODUCTION The peracarid crustacean fauna from the Caribbean coast of northern South America is still very incompletely documented. Recent studies indicate the existence of a rich fauna along this region. Along the Colombian coast, for example, a considerable number of interesting or previously undescribed isopod species have been found (Muller, 1988a, b; 1989; 1990a, b, c, d; 1991; 1992; 1993a, b, c; Kensley and Schotte, 1994). In contrast, reports on amphipods from this coast are sparse, and only a few species have been recorded by Barnard (1954), Calero (1982), and Ortiz (1983). In an effort to increase a collection base for systematic studies of the crustacean fauna from this coast, one of the authors (R.L.) conducted qualitative sampling in various shore habitats south of the city of Cartagena, Colombia, during the months of March and July of 1991. -
Redalyc.Biodiversity of the Gammaridea and Corophiidea
Revista de Biología Tropical ISSN: 0034-7744 [email protected] Universidad de Costa Rica Costa Rica Chiesa, Ignacio L.; Alonso, Gloria M. Biodiversity of the Gammaridea and Corophiidea (Crustacea: Amphipoda) from the Beagle Channel and the Straits of Magellan: a preliminary comparison between their faunas Revista de Biología Tropical, vol. 55, núm. 1, 2007, pp. 103-112 Universidad de Costa Rica San Pedro de Montes de Oca, Costa Rica Available in: http://www.redalyc.org/articulo.oa?id=44909914 How to cite Complete issue Scientific Information System More information about this article Network of Scientific Journals from Latin America, the Caribbean, Spain and Portugal Journal's homepage in redalyc.org Non-profit academic project, developed under the open access initiative Biodiversity of the Gammaridea and Corophiidea (Crustacea: Amphipoda) from the Beagle Channel and the Straits of Magellan: a preliminary comparison between their faunas Ignacio L. Chiesa 1,2 & Gloria M. Alonso 2 1 Laboratorio de Artrópodos, Departamento de Biodiversidad y Biología Experimental, Facultad de Ciencias Exactas y Naturales, Universidad de Buenos Aires, Ciudad Universitaria, C1428EHA, Buenos Aires, Argentina; ichiesa@ bg.fcen.uba.ar 2 Museo Argentino de Ciencias Naturales “Bernardino Rivadavia”, Div. Invertebrados, Av. Ángel Gallardo 470, C1405DJR, Buenos Aires, Argentina; [email protected] Received 10-XI-2005. Corrected 25-IV-2006. Accepted 16-III-2007. Abstract: Gammaridea and Corophiidea amphipod species from the Beagle Channel and the Straits of Magellan were listed for the first time; their faunas were compared on the basis of bibliographic information and material collected in one locality at Beagle Channel (Isla Becasses). The species Schraderia serraticauda and Heterophoxus trichosus (collected at Isla Becasses) were cited for the first time for the Magellan region; Schraderia is the first generic record for this region. -
Florida Keys Species List
FKNMS Species List A B C D E F G H I J K L M N O P Q R S T 1 Marine and Terrestrial Species of the Florida Keys 2 Phylum Subphylum Class Subclass Order Suborder Infraorder Superfamily Family Scientific Name Common Name Notes 3 1 Porifera (Sponges) Demospongia Dictyoceratida Spongiidae Euryspongia rosea species from G.P. Schmahl, BNP survey 4 2 Fasciospongia cerebriformis species from G.P. Schmahl, BNP survey 5 3 Hippospongia gossypina Velvet sponge 6 4 Hippospongia lachne Sheepswool sponge 7 5 Oligoceras violacea Tortugas survey, Wheaton list 8 6 Spongia barbara Yellow sponge 9 7 Spongia graminea Glove sponge 10 8 Spongia obscura Grass sponge 11 9 Spongia sterea Wire sponge 12 10 Irciniidae Ircinia campana Vase sponge 13 11 Ircinia felix Stinker sponge 14 12 Ircinia cf. Ramosa species from G.P. Schmahl, BNP survey 15 13 Ircinia strobilina Black-ball sponge 16 14 Smenospongia aurea species from G.P. Schmahl, BNP survey, Tortugas survey, Wheaton list 17 15 Thorecta horridus recorded from Keys by Wiedenmayer 18 16 Dendroceratida Dysideidae Dysidea etheria species from G.P. Schmahl, BNP survey; Tortugas survey, Wheaton list 19 17 Dysidea fragilis species from G.P. Schmahl, BNP survey; Tortugas survey, Wheaton list 20 18 Dysidea janiae species from G.P. Schmahl, BNP survey; Tortugas survey, Wheaton list 21 19 Dysidea variabilis species from G.P. Schmahl, BNP survey 22 20 Verongida Druinellidae Pseudoceratina crassa Branching tube sponge 23 21 Aplysinidae Aplysina archeri species from G.P. Schmahl, BNP survey 24 22 Aplysina cauliformis Row pore rope sponge 25 23 Aplysina fistularis Yellow tube sponge 26 24 Aplysina lacunosa 27 25 Verongula rigida Pitted sponge 28 26 Darwinellidae Aplysilla sulfurea species from G.P. -
Hays County Regional Habitat Conservation Plan Final HCP
APPENDIX A Mapping Potential Golden-cheeked Warbler Breeding Habitat Using Remotely Sensed Forest Canopy Cover Data Loomis Partners, Inc. (2008) Hays County Regional Habitat Conservation Plan Mapping Potential Golden-cheeked Warbler Breeding Habitat Using Remotely Sensed Forest Canopy Cover Data Prepared for: County of Hays 111 E. San Antonio Street San Marcos, Texas 78666 Prepared by: ENGINEERING, LAND SURVEYING & ENVIRONMENTAL CONSULTING 3101 Bee Cave Road, Suite 100 Austin, TX 78746 512/327-1180 FAX: 512/327-4062 LAI Proj. No. 051001 August 12, 2008 Mapping Potential GCW Habitat LAI Proj. No. 051001 Table of Contents 1.0 INTRODUCTION..................................................................................................................................1 1.1 PURPOSE AND OBJECTIVES........................................................................................................................1 1.2 GOLDEN-CHEEKED WARBLER...................................................................................................................1 1.3 NATIONAL LAND COVER DATABASE 2001 ...............................................................................................3 2.0 METHODS .............................................................................................................................................3 2.1 HABITAT MAPPING ...................................................................................................................................3 2.2 PROBABILITY OF OCCUPANCY ANALYSIS .................................................................................................5