Genome Integrity and Transmission Gene Expression
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Vol. 180 No. 4 December 2008 PERSPECTIVES DENELL, ROB, Establishment of Tribolium as a genetic model system and its early contributions to evo-devo .......................................................................................................................................................... 1779—1786 REVIEW DRUMMOND-BARBOSA, DANIELA, Stem cells, their niches and the systemic environment: An aging network .......................................................................................................................................................... 1787—1797 INVESTIGATIONS Genome integrity and transmission REID, ROBERT J. D., IVANA SUNJEVARIC, WARREN P. VOTH, SAMANTHA CICCONE, WENDY DU, AILEEN E. OLSEN, DAVID J. STILLMAN AND RODNEY ROTHSTEIN, Chromosome-scale genetic mapping using a set of 16 conditionally stable Saccharomyces cerevisiae chromosomes .................................................................................. 1799—1808 PALMBOS, PHILLIP L., DONGLIANG WU, JAMES M. DALEY AND THOMAS E. WILSON, Recruitment of Saccharomyces cerevisiae Dnl4–Lif1 complex to a double-strand break requires interactions with Yku80 and the Xrs2 FHA domain............................................................................................................................................. 1809—1819 TITEN, SIMON W. A., AND KENT G. GOLIC, Telomere loss provokes multiple pathways to apoptosis and produces genomic instability in Drosophila melanogaster................................................................................ 1821—1832 MCCUNE, HEATHER J., LAURA S. DANIELSON, GINA M. ALVINO, DAVID COLLINGWOOD, JEFFREY J. DELROW, WALTON L. FANGMAN, BONITA J. BREWER AND M. K. RAGHURAMAN, The temporal program of chromosome replication: Genomewide replication in Clb5⌬ Saccharomyces cerevisiae............................................................ 1833—1847 HOWELL, ELAINE C., MICHAEL J. KEARSEY, GARETH H. JONES, GRAHAM J. KING AND SUSAN J. ARMSTRONG, A and C genome distinction and chromosome identification in Brassica napus by sequential fluorescence in situ hybridization and genomic in situ hybridization.......................................................................... 1849—1857 PARVANOV, EMIL, JUERG KOHLI AND KATJA LUDIN, The mating-type-related bias of gene conversion in Schizosaccharomyces pombe ................................................................................................................. 1859—1868 RONG, YIKANG S., Loss of the histone variant H2A.Z restores capping to checkpoint-defective telomeres in Drosophila ....................................................................................................................................... 1869—1875 REDMAN, ELIZABETH, VICTORIA GRILLO, GARY SAUNDERS, ERICA PACKARD, FRANK JACKSON, MATT BERRIMAN AND JOHN STUART GILLEARD, Genetics of mating and sex determination in the parasitic nematode Haemonchus contortus............................................................................................................................................ 1877—1887 ACHARYA, SONIA N., ALEXANDER M. MANY, ANDREW P. S CHROEDER, FELICIA M. KENNEDY, OLEKSANDR P. S AVYTSKYY, JENNIFER T. G RUBB, JACK A. VINCENT, ELIZABETH A. FRIEDLE, MARTINA CELERIN, DANIEL S. MAILLET, HEATHER J. PALMERINI, MEGAN A. GREISCHAR, GABRIEL MONCALIAN, R. SCOTT WILLIAMS, JOHN A. TAINER AND MIRIAM E. ZOLAN, Coprinus cinereus rad50 mutants reveal an essential structural role for Rad50 in axial element and synaptonemal complex formation, homolog pairing and meiotic recombination ................... 1889—1907 Gene expression KANG, HYUN MIN, CHUN YE AND ELEAZAR ESKIN, Accurate discovery of expression quantitative trait loci under confounding from spurious and genuine regulatory hotspots ................................................... 1909—1925 YAMASAKI, TOMOHITO, HITOSHI MIYASAKA AND TAKESHI OHAMA, Unstable RNAi effects through epigenetic silencing of an inverted repeat transgene in Chlamydomonas reinhardtii ..................................... 1927—1944 WANG, XIAOGANG, HAIMING XU, DONGHONG JU AND YOUMING XIE, Disruption of Rpn4-induced proteasome expression in Saccharomyces cerevisiae reduces cell viability under stressed conditions............... 1945—1953 WANG, CHIA-LIN, JOSEPH LANDRY AND ROLF STERNGLANZ, A yeast Sir2 mutant temperature sensitive for silencing .......................................................................................................................................................... 1955—1962 SIERA, SCOTT G., AND THOMAS W. CLINE, Sexual back talk with evolutionary implications: Stimulation of the Drosophila sex-determination gene Sex-lethal by its target transformer ........................................ 1963—1981 SIDORENKO, LYUDMILA, AND VICKI CHANDLER, RNA-dependent RNA polymerase is required for enhancer- mediated transcriptional silencing associated with paramutation at the maize p1 gene .......... 1983—1993 FUTAHASHI, RYO, JOTARO SATO, YAN MENG, SHUN OKAMOTO, TAKAAKI DAIMON, KIMIKO YAMAMOTO, YOSHITAKA SUETSUGU, JUNKO NARUKAWA, HIROKAZU TAKAHASHI, YUTAKA BANNO, SUSUMU KATSUMA, TORU SHIMADA, KAZUEI MITA AND HARUHIKO FUJIWARA, yellow and ebony are the responsible genes for the larval color mutants of the silkworm Bombyx mori ...................................................................................................................... 1995—2005 SPITZNER, ANDREA, ANGELIKA F. PERZLMAIER, KERSTIN E. GEILLINGER, PETRA REIHL AND JÜRGEN STOLZ, The proline- dependent transcription factor Put3 regulates the expression of the riboflavin transporter MCH5 in Saccharomyces cerevisiae ..................................................................................................................... 2007—2017 Cellular genetics STRADER, LUCIA C., MELANIE MONROE-AUGUSTUS, KRISTEN C. ROGERS, GRACE L. LIN AND BONNIE BARTEL, Arabidopsis iba response5 suppressors separate responses to various hormones......................... 2019—2031 MEEDNU, NIDA, HAROLD HOOPS, SONIA D’SILVA, LEAH POGORZALA, SCHUYLER WOOD, DAVID FARKAS, MARK SORRENTINO, ELAINE SIA, PAM MELUH AND RITA K. MILLER, The spindle positioning protein Kar9p interacts with the sumoylation machinery in Saccharomyces cerevisiae.................................................................. 2033—2055 FRANCISCOVICH, A. L., A. D. VRAILAS MORTIMER, A. A. FREEMAN, J. GU AND S. SANYAL, Overexpression screen in Drosophila identifies neuronal roles of GSK-3/shaggy as a regulator of AP-1-dependent developmental plasticity ........................................................................................................................................... 2057—2071 BALESTRA, FERNANDO R., AND JUAN JIMENEZ, A G2-phase microtubule-damage response in fission yeast .......................................................................................................................................................... 2073—2080 BLACHON, STEPHANIE, JAYACHANDRAN GOPALAKRISHNAN, YOSHIHIRO OMORI, ANDREY POLYANOVSKY, ALLEN CHURCH, DANIELA NICASTRO, JAREMA MALICKI AND TOMER AVIDOR-REISS, Drosophila asterless and vertebrate Cep152 are orthologs essential for centriole duplication................................................................................ 2081—2094 Developmental and behavioral genetics MELICHAREK, DAVID, ARPIT SHAH, GINNENE DISTEFANO, ANDREW J. GANGEMI, ANDREW ORAPALLO, ALYSIA D. VRAILAS-MORTIMER AND DANIEL R. MARENDA, Identification of novel regulators of atonal expression in the developing Drosophila retina ........................................................................................................ 2095—2110 KLEEMANN, GUNNAR, LINGYUN JIA AND SCOTT W. EMMONS, Regulation of Caenorhabditis elegans male mate search- ing behavior by the nuclear receptor DAF-12 .............................................................................. 2111—2122 JIN, ZHIGANG, ELLEN HOMOLA, STANLEY TIONG AND SHELAGH D. CAMPBELL, Drosophila Myt1 is the major Cdk1 inhibitory kinase for wing imaginal disc development ................................................................ 2123—2133 Population and evolutionary genetics MARTIN, GUILLAUME, ELODIE CHAPUIS AND JÉROˆ ME GOUDET, Multivariate Q st–Fst comparisons: A neutrality test for the evolution of the G matrix in structured populations ...................................................... 2135—2149 CHAPUIS, ELODIE, GUILLAUME MARTIN AND JÉROˆ ME GOUDET, Effects of selection and drift on G matrix evolution in a heterogeneous environment: A multivariate Q st–Fst test with the freshwater snail Galba truncatula .......................................................................................................................................................... 2151—2161 FOGLE, CRAIG A., JAMES L. NAGLE AND MICHAEL M. DESAI, Clonal interference, multiple mutations and adap- tation in large asexual populations ............................................................................................... 2163—2173 DESAI, MICHAEL M., AND JOSHUA B. PLOTKIN, The polymorphism frequency spectrum of finitely many sites under selection................................................................................................................................ 2175—2191 HANDEL, ANDREAS, AND MATTHEW R. BENNETT, Surviving the bottleneck: Transmission mutants and the evolu- tion of microbial populations ........................................................................................................ 2193—2200 Genetics of complex traits