Mitochondrial Biogenesis and Mitochondrial Reactive Oxygen Species (ROS): a Complex Relationship Regulated by the Camp/PKA Signaling Pathway
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cells Review Mitochondrial Biogenesis and Mitochondrial Reactive Oxygen Species (ROS): A Complex Relationship Regulated by the cAMP/PKA Signaling Pathway Cyrielle Bouchez 1,2 and Anne Devin 1,2,* 1 Université Bordeaux, IBGC, UMR 5095, 33077 Bordeaux CEDEX, France; [email protected] 2 Institut de Biochimie et Génétique Cellulaires, CNRS UMR 5095, 1, rue Camille Saint Saëns, 33077 Bordeaux CEDEX, France * Correspondence: [email protected]; Tel.: +33-556-999-035; Fax: +33-556-999-040 Received: 28 February 2019; Accepted: 20 March 2019; Published: 27 March 2019 Abstract: Mitochondrial biogenesis is a complex process. It requires the contribution of both the nuclear and the mitochondrial genomes and therefore cross talk between the nucleus and mitochondria. Cellular energy demand can vary by great length and it is now well known that one way to adjust adenosine triphosphate (ATP) synthesis to energy demand is through modulation of mitochondrial content in eukaryotes. The knowledge of actors and signals regulating mitochondrial biogenesis is thus of high importance. Here, we review the regulation of mitochondrial biogenesis both in yeast and in mammalian cells through mitochondrial reactive oxygen species. Keywords: mitochondrial biogenesis; ROS; cAMP signaling; yeast 1. Introduction 1.1. Mitochondrial Oxidative Phosphorylation In eukaryotic cells, energy conversion processes are mandatory for both cell biomass generation and cellular maintenance. Adenosine triphosphate (ATP) is the cellular energy currency, and mitochondria play a crucial role in ATP synthesis thanks to the oxidative phosphorylation system (OXPHOS) located in the mitochondrial inner membrane. The oxidative part of this energy conversion process takes place in the four enzymatic complexes of the mitochondrial respiratory chain and leads to substrates—nicotinamide adenine dinucleotide (NADH) and flavin adenine dinucleotide (FADH2)—oxidation. Activity of the respiratory chain is based on the transfer of two electrons from above-mentioned substrates to their final acceptor, the dioxygen. These redox reactions are coupled to proton extrusion at the level of complexes I, III, and IV in mammalian cells (Figure1A); thus, thanks to the inner mitochondrial membrane being quite impermeable, a proton gradient is generated across this membrane. The yeast Saccharomyces cerevisiae mitochondria do not harbor a proton-pumping complex I but rather a number of dehydrogenases (Figure1B) in the inner mitochondrial membrane [ 1]. The phosphorylating part of this process involves the ATPsynthase, the adenine nucleotide translocator (ANT), and the phosphate carrier. The proton gradient generated by the mitochondrial respiratory chain activity is used by the ATPsynthase for ATP synthesis from ADP and Pi and by a number of mitochondrial carriers. Cells 2019, 8, 287; doi:10.3390/cells8040287 www.mdpi.com/journal/cells Cells 2019, 8, 287 2 of 15 Cells 2019, 8, x FOR PEER REVIEW 2 of 15 FigureFigure 1. The 1. The oxidative oxidative phosphorylation phosphorylation system system (OXPHOS (OXPHOS)) system system in mammalian in mammalian cells (A cells) and( Ain) and in yeastyeast ((B) (modified (modified from from Rigoulet Rigoulet et al. 2010 et al. [2]). 2010Numbers [2]). represent Numbers respiratory represent chain respiratory complexes. I: chain complexes.proton-pumping I: proton-pumping nicotinamide nicotinamideadenine dinucleotide adenine ( dinucleotideNADH) dehydrogenase, (NADH) dehydrogenase,II: Succinate II: Succinatedehydrogenase; dehydrogenase; III: Cytochrome III: Cytochrome c reductase; c reductase; IV: Cytochrome IV: Cytochrome c oxidase. c oxidase. Adenine Adenine nucleotide nucleotide translocator (ANT) and Phosphate inorganic carrier are mitochondrial carriers. Gut2p is the glycerol- translocator (ANT) and Phosphate inorganic carrier are mitochondrial carriers. Gut2p is the 3-phosphate dehydrogenase in yeast. Dld1p is the lactate dehydrogenase in yeast. glycerol-3-phosphate dehydrogenase in yeast. Dld1p is the lactate dehydrogenase in yeast. 1.2. Mitochondrial1.2. Mitochondrial ROS ROS Production Production The main superoxide (O2.−) producer in the cell is the mitochondrial respiratory chain. This The main superoxide (O2· ) producer in the cell is the mitochondrial respiratory chain. production leads to hydrogen peroxide (H2O2) and hydroxyl radical (.HO) formation. Superoxide · This productionformation occurs leads when to hydrogen a unique peroxideelectron is(H accepted2O2) and by hydroxylthe ground radical state oxygen. ( HO) Consequently, formation. Superoxide any formationelectron occurs transfer when that ainvolves unique a electronunique electron is accepted is susceptible by the ground of superoxide state oxygen.generation. Consequently, This is any electronparticularly transfer true in that membranes, involves w ahere unique oxygen electron solubility is susceptible is high. The of respiratory superoxide chain generation. complexes ThisI is particularlyand III have true long in membranes, been studied for where their oxygen contribution solubility to mitochondrial is high. The reactive respiratory oxygen chainspecies complexes (ROS) I and IIIproduction have long [3– been8]. In studiedcomplex forIII, superoxide their contribution formation to is mitochondrial due to the Q cycle reactive [9], and oxygen ROS production species (ROS) productioncan take [3 –place8]. In both complex in the III, mitochondrial superoxide formation matrix and is duein the to theintermembrane Q cycle [9], and space. ROS Besides production the can takecontribution place both in of the these mitochondrial complexes to matrixmitochondrial and in theROS intermembrane production, mitochondrial space. Besides dehydrogenases the contribution are involved in ROS formation as well. For example, α-ketoglutarate dehydrogenase catalyses the of these complexes to mitochondrial ROS production, mitochondrial dehydrogenases are involved oxidation of α-ketoglutarate in succinyl-coA with the generation of NADH. Single electron transfer in ROS formation as well. For example, α-ketoglutarate dehydrogenase catalyses the oxidation of occurs within this enzyme, and its activity can thus be associated with ROS production in the Krebs α-ketoglutarate in succinyl-coA with the generation of NADH. Single electron transfer occurs within this enzyme, and its activity can thus be associated with ROS production in the Krebs cycle [10]. For the same reason, the mitochondrial glycerol-3-phosphate dehydrogenase (G3PDH) produces ROS [11,12]. CellsCells 20192019, ,88, ,x 287 FOR PEER REVIEW 33 of of 15 15 cycle [10]. For the same reason, the mitochondrial glycerol-3-phosphate dehydrogenase (G3PDH) producesAs stated above,ROS [11,12] the yeast. AsSaccharomyces stated above, cerevisiae the yeastharbors Saccharomyces two NADH-dehydrogenases, cerevisiae harbors whichtwo NADH are sites- dehydrogenases,of ROS production which as well. are sites of ROS production as well. InIn this this review, review, we we will will address address the the relationships relationships between between mitochondrial mitochondrial ROS ROS production production and and thethe regulation regulation of of mitochondrial mitochondrial biogenesis biogenesis (i.e. (i.e.,, the the biogenesis biogenesis of of the the whole whole compartment compartment and and more more particularlyparticularly of of the the OXPHOS OXPHOS system) system) both both in in yeast yeast and and in in mammalian mammalian cells. cells. 2.2. Mitochondrial Mitochondrial Compart Compartmentment Biogenesis Biogenesis MitochondrialMitochondrial biogenesis biogenesis is is a a complex complex process. process. Indeed, Indeed, mitochondria mitochondria are are organelles organelles that that harbor harbor theirtheir own own genome genome (mtDNA) (mtDNA).. In In mammalian mammalian cells, cells, mtDNA mtDNA is a is circular a circular molecule, molecule, which which encodes encodes for 13for mRNAs, 13 mRNAs, 22 tRNAs, 22 tRNAs, and and 2 rRNAs. 2 rRNAs. All All13 13mRNAs mRNAs of ofmt mtDNADNA encode encode 11 11 subunits subunits of of the the ETC ETC complexescomplexes II (7),(7), III III (1) (1) and and IV (3),IV and(3), 2 and subunits 2 subunits of ATP synthaseof ATP (complexsynthase V).(complex However, V) mitochondria. However, mitochondriaare genetically are semiautonomous genetically semiautonomous and strongly rely and on strongly the nuclear rely genome on the fornuclear their biologicalgenome for function. their biologicalThus, mitochondrial function. Thus, biogenesis mitochondri necessitatesal biogenesis the coordinated necessitates expression the coordinated of both expression mitochondrial of both and mitochondrialnuclear genomes. and nuclear genomes. InIn the the yeast yeast SaccharomycesSaccharomyces cerevisiae cerevisiae ((FigureFigure 22),), mitochondrialmitochondrial biogenesisbiogenesis is regulatedregulated atat thethe transcriptionaltranscriptional level, level, by by nuclear nuclear proteins. proteins. The The main main actor actor of of th thisis process process is is a a transcription transcription complex complex composedcomposed of of four four proteins proteins that that belong belong to tothe the same same family: family: heme heme activator activator proteins proteins (Hap) (Hap) 2, 3, 4 2,, and 3, 4, 5and [13– 517] [13. Hap2p,–17]. Hap2p, Hap3p, Hap3p, and Hap5p and form Hap5p a complex form a complexthat is bound that isto boundnuclear to DNA, nuclear and DNA, Hap4p and is theHap4p co-activator is the co-activator of this complex, of this