D12/S(HSS)/D 2013/14 NHS STANDARD CONTRACT for STICKLER SYNDROME DIAGNOSTIC SERVICE (CHILDREN) SECTION B PART 1
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Joint Hypermobility Syndromes
10/17/2017 Hereditary Disorders of Connective Tissue: Overview CLAIR A. FRANCOMANO, M.D. HARVEY INSTITUTE FOR HUMAN GENETICS BALTIMORE, MD Disclosures I have no conflicts to disclose 1 10/17/2017 Joint Hypermobility Seen in over 140 clinical syndromes listed in Online Mendelian Inheritance in Man (OMIM) Congenital anomaly syndromes Short stature syndromes Hereditary disorders of connective tissue Connective Tissue Supports and Protects Bones Collagen Fibers Cartilage Elastic Fibers Tendons Mucopolysaccharides Ligaments 2 10/17/2017 Fibrillar Collagens Major structural components of the extracellular matrix Include collagen types I, II, III, V, IX, and XI Trimeric molecules (three chains) May be made up of three identical or genetically distinct chains, called alpha chains Fibrillar Collagens Biochemical Society Transactions (1999) , - - www.biochemsoctrans.org 3 10/17/2017 Hereditary Disorders of Connective Tissue Marfan syndrome Loeys-Dietz syndrome Stickler syndrome Osteogenesis Imperfecta Ehlers-Danlos syndromes Marfan Syndrome Aneurysmal dilation of the ascending aorta Dislocation of the ocular lenses Tall stature Scoliosis Pectus deformity Arachnodactyly (long, narrow fingers and toes) Dolicostenomelia (tall, thin body habitus) Caused by mutations in Fibrillin-1 4 10/17/2017 Marfan Syndrome Loeys-Dietz Syndrome Aortic dilation with dissection Tortuous blood vessels Craniofacial features Hypertelorism Malar hypoplasia Cleft palate or bifid uvula Caused by mutations in TGFBR1 and TGFBR2 as well as -
Identi Cation of Three Novel Homozygous Variants in COL9A3
Identication of three novel homozygous variants in COL9A3 causing autosomal-recessive Stickler Syndrome Aboulfazl Rad University of Tübingen: Eberhard Karls Universitat Tubingen Maryam Naja Universitätsklinikum Freiburg: Universitatsklinikum Freiburg Fatemeh Suri Shahid Beheshti University Soheila Abedini Mashhad University of Medical Sciences Stephen Loum Eberhard Karls Universitat Tubingen Ehsan Ghayoor Karimiani Mashhad University of Medical Sciences Narsis Daftarian Shahid Beheshti University David Murphy UCL: University College London Mohammad Doosti Mashhad University of Medical Sciences Afrooz Moghaddasi Shahid Beheshti University Hamid Ahmadieh Shahid Beheshti University Hamideh Sabbaghi Shahid Beheshti University Mohsen Rajati Mashhad University of Medical Sciences Ghaem Hospital Narges Hashemi Mashhad University of Medical Sciences Barbara Vona Eberhard Karls Universitat Tubingen Miriam Schmidts ( [email protected] ) Universitatsklinikum Freiburg https://orcid.org/0000-0002-1714-6749 Research Article Keywords: autosomal recessive Stickler syndrome, COL9A3, collagen, hearing loss, retinal detachment Posted Date: May 17th, 2021 DOI: https://doi.org/10.21203/rs.3.rs-526117/v1 License: This work is licensed under a Creative Commons Attribution 4.0 International License. Read Full License Page 1/10 Abstract Background: Stickler syndrome (STL) is a rare, clinically and molecularly heterogeneous connective tissue disorder. Pathogenic variants occurring in a variety of genes cause STL, mainly inherited in an autosomal -
Whole Exome Sequencing Gene Package Vision Disorders, Version 6.1, 31-1-2020
Whole Exome Sequencing Gene package Vision disorders, version 6.1, 31-1-2020 Technical information DNA was enriched using Agilent SureSelect DNA + SureSelect OneSeq 300kb CNV Backbone + Human All Exon V7 capture and paired-end sequenced on the Illumina platform (outsourced). The aim is to obtain 10 Giga base pairs per exome with a mapped fraction of 0.99. The average coverage of the exome is ~50x. Duplicate and non-unique reads are excluded. Data are demultiplexed with bcl2fastq Conversion Software from Illumina. Reads are mapped to the genome using the BWA-MEM algorithm (reference: http://bio-bwa.sourceforge.net/). Variant detection is performed by the Genome Analysis Toolkit HaplotypeCaller (reference: http://www.broadinstitute.org/gatk/). The detected variants are filtered and annotated with Cartagenia software and classified with Alamut Visual. It is not excluded that pathogenic mutations are being missed using this technology. At this moment, there is not enough information about the sensitivity of this technique with respect to the detection of deletions and duplications of more than 5 nucleotides and of somatic mosaic mutations (all types of sequence changes). HGNC approved Phenotype description including OMIM phenotype ID(s) OMIM median depth % covered % covered % covered gene symbol gene ID >10x >20x >30x ABCA4 Cone-rod dystrophy 3, 604116 601691 94 100 100 97 Fundus flavimaculatus, 248200 {Macular degeneration, age-related, 2}, 153800 Retinal dystrophy, early-onset severe, 248200 Retinitis pigmentosa 19, 601718 Stargardt disease -
A Study of the Clinical and Radiological Features in a Cohort of 93 Patients with a COL2A1 Mutation Causing Spondyloepiphyseal D
RESEARCH ARTICLE A Study of the Clinical and Radiological Features in a Cohort of 93 Patients with a COL2A1 Mutation Causing Spondyloepiphyseal Dysplasia Congenita or a Related Phenotype Paulien A. Terhal,1* Rutger Jan A. J. Nievelstein,2 Eva J. J. Verver,3 Vedat Topsakal,3 Paula van Dommelen,4 Kristien Hoornaert,5 Martine Le Merrer,6 Andreas Zankl,7 Marleen E. H. Simon,8 Sarah F. Smithson,9 Carlo Marcelis,10 Bronwyn Kerr,11 Jill Clayton-Smith,11 Esther Kinning,12 Sahar Mansour,13 Frances Elmslie,13 Linda Goodwin,14 Annemarie H. van der Hout,15 Hermine E. Veenstra-Knol,15 Johanna C. Herkert,15 Allan M. Lund,16 Raoul C. M. Hennekam,17 Andre´ Me´garbane´,18 Melissa M. Lees,19 Louise C. Wilson,19 Alison Male,19 Jane Hurst,19,20 Yasemin Alanay,21 Go¨ran Annere´n,22 Regina C. Betz,23 Ernie M. H. F. Bongers,10 Valerie Cormier-Daire,6 Anne Dieux,24 Albert David,25 Mariet W. Elting,26 Jenneke van den Ende,27 Andrew Green,28 Johanna M. van Hagen,26 Niels Thomas Hertel,29 Muriel Holder-Espinasse,24,30 Nicolette den Hollander,31 Tessa Homfray, Hanne D. Hove,32 Susan Price,20 Annick Raas-Rothschild,33 Marianne Rohrbach,34 Barbara Schroeter,35 Mohnish Suri,36 Elizabeth M. Thompson,37 Edward S. Tobias,38 Annick Toutain,39 Maaike Vreeburg,40 Emma Wakeling,41 Nine V. Knoers,1 Paul Coucke,42,43 and Geert R. Mortier27,43 1Department of Medical Genetics, University Medical Centre Utrecht, Utrecht, The Netherlands 2Department of Radiology, University Medical Centre Utrecht, Utrecht, The Netherlands 3Department of Otorhinolaryngology and Head and Neck Surgery, -
The Epidemiology of Deafness
Downloaded from http://perspectivesinmedicine.cshlp.org/ on September 25, 2021 - Published by Cold Spring Harbor Laboratory Press The Epidemiology of Deafness Abraham M. Sheffield1 and Richard J.H. Smith2,3,4,5 1Department of Otolaryngology, Head and Neck Surgery, University of Iowa, Iowa City, Iowa 52242 2Molecular Otolaryngology and Renal Research Laboratories (MORL), Department of Otolaryngology, University of Iowa, Iowa City, Iowa 52242 3Department of Molecular Physiology & Biophysics, University of Iowa, Iowa City, Iowa 52242 4Department of Pediatrics, University of Iowa, Iowa City, Iowa 52242 5Department of Internal Medicine, University of Iowa, Iowa City, Iowa 52242 Correspondence: [email protected] Hearing loss is the most common sensory deficit worldwide. It affects ∼5% of the world population, impacts people of all ages, and exacts a significant personal and societal cost. This review presents epidemiological data on hearing loss. We discuss hereditary hearing loss, complex hearing loss with genetic and environmental factors, and hearing loss that is more clearly related to environment. We also discuss the disparity in hearing loss across the world, with more economically developed countries having overall lower rates of hearing loss compared with developing countries, and the opportunity to improve diagnosis, preven- tion, and treatment of this disorder. earing loss is the most common sensory refer to people with mild-to-moderate (and Hdeficit worldwide, affecting more than half sometimes severe) hearing loss, whereas the a billion people (Smith et al. 2005; Wilson et al. term “deaf” (lower case “d”) is more commonly 2017). Normal hearing is defined as having hear- reserved for those with severe or profound hear- ing thresholds of ≤25 dB in both ears. -
Ophthalmology
Ophthalmology Information for health professionals MEDICAL GENETIC TESTING FOR OPHTHALMOLOGY Recent technologies, in particularly Next Generation Sequencing (NGS), allows fast, accurate and valuable diagnostic tests. For Ophthalmology, CGC Genetics has an extensive list of medical genetic tests with clinical integration of results by our Medical Geneticists. 1. EXOME SEQUENCING: Exome Sequencing is a very efficient strategy to study most exons of a patient’s genome, unraveling mutations associated with specific disorders or phenotypes. With this diagnostic strategy, patients can be studied with a significantly reduced turnaround time and cost. CGC Genetics has available 2 options for Exome Sequencing: • Whole Exome Sequencing (WES), which analyzes the entire exome (about 20 000 genes); • Disease Exome by CGC Genetics, which analyzes about 6 000 clinically-relevant genes. Any of these can be performed in the index case or in a Trio. 2. NGS PANELS For NGS panels, several genes associated with the same phenotype are simultaneously sequenced. These panels provide increased diagnostic capability with a significantly reduced turnaround time and cost. CGC Genetics has several NGS panels for Ophthalmology that are constantly updated (www.cgcgenetics.com). Any gene studied in exome or NGS panel can also be individually sequenced and analyzed for deletion/duplication events. 3. EXPERTISE IN MEDICAL GENETICS CGC Genetics has Medical Geneticists specialized in genetic counseling for ophthalmological diseases who may advice in choosing the most appropriate -
Basement Membranes in Diseases Affecting the Eye, Kidney
Van Agtmael, T. and Bruckner-Tuderman, L. (2010) Basement membranes and human disease. Cell and Tissue Research, 339 (1). pp. 167-188. ISSN 0302-766X http://eprints.gla.ac.uk/35275/ Deposited on: 30 August 2010 Enlighten – Research publications by members of the University of Glasgow http://eprints.gla.ac.uk Basement membranes and human disease Tom van Agtmael§ and Leena Bruckner-Tuderman* § Faculty of Biomedical and Life Sciences, University of Glasgow, Glasgow, U.K. and * Dept. of Dermatology, University Medical Center Freiburg and Freiburg Institute for Advanced Studies, Freiburg, Germany Corresponding authors: Tom Van Agtmael Faculty of Biomedical and Life Sciences, Davidson Building, University of Glasgow, University Avenue, Glasgow UK, [email protected],. Leena Bruckner-Tuderman Department of Dermatology, University Medical Center Freiburg, Hauptstr. 7, 79104 Freiburg, Germany. E-mail: [email protected] Keywords: basement membrane, laminin, collagen, laminin, nidogen Abbreviations BM: basement membrane, NMJ neuromuscular junction, DEJ dermo epidermal junction, SJS Schwartz Jampel syndrome, DDSH Dyssegmental dysplasia silverman handmaker type, EB epidermolysis bullosa, GBM glomerular basement membrane 1 Abstract In 1990 the role of basement membranes in human disease was established by the identification of COL4A5 mutations in Alport’s syndrome. Since then the number of diseases caused by mutations in basement membrane components has steadily increased as has our understanding of the roles of basement membranes in organ development and function. However, many questions remain as to the molecular and cellular consequences of these mutations and how they lead to the observed disease phenotypes. Despite this, exciting progress has recently been made with potential treatment options for some of these so far incurable diseases. -
Vitreoretinopathy with Phalangeal Epiphyseal Dysplasia, a Type II
661 J Med Genet: first published as 10.1136/jmg.39.9.661 on 1 September 2002. Downloaded from SHORT REPORT Vitreoretinopathy with phalangeal epiphyseal dysplasia, a type II collagenopathy resulting from a novel mutation in the C-propeptide region of the molecule A J Richards, J Morgan,PWPBearcroft, E Pickering, M J Owen, P Holmans, N Williams, C Tysoe, F M Pope, M P Snead, H Hughes ............................................................................................................................. J Med Genet 2002;39:661–665 quadrant of some patients. Although the vitreous did not A large family with dominantly inherited rhegmatogenous exhibit the congenital membraneous anomaly characteristic retinal detachment, premature arthropathy, and develop- of Stickler syndrome type 1,15–17 the architecture was strikingly ment of phalangeal epiphyseal dysplasia, resulting in abnormal, with absence of the usual lamellar array. Affected brachydactyly was linked to COL2A1, the gene encoding subjects had a spherical mean refractive error of –1.46 diopt- α pro 1(II) collagen. Mutational analysis of the gene by res (SD 1.5), which was not significantly greater than that in exon sequencing identified a novel mutation in the unaffected subjects (mean refractive error –0.71, SD 0.99, C-propeptide region of the molecule. The glycine to aspar- p=0.13, Mann-Whitney test). The axial length was slightly tic acid change occurred in a region that is highly greater in affected eyes (mean 24.6 mm, SD 0.73) compared conserved in all fibrillar collagen molecules. The resulting with unaffected eyes (mean 23.8 mm, SD 1.1, p=0.008, t test). phenotype does not fit easily into pre-existing subgroups of A single affected subject, whose axial length had increased to the type II collagenopathies, which includes spondyloepi- 33.5 mm, following retinal detachment surgery, distorted any physeal dysplasia, and the Kniest, Strudwick, and Stickler apparent variation in myopia between affected and unaffected dysplasias. -
A Review of Hypermobility Syndromes and Chronic Or Recurrent Musculoskeletal Pain in Children Marco Cattalini1, Raju Khubchandani2 and Rolando Cimaz3*
Cattalini et al. Pediatric Rheumatology (2015) 13:40 DOI 10.1186/s12969-015-0039-3 REVIEW Open Access When flexibility is not necessarily a virtue: a review of hypermobility syndromes and chronic or recurrent musculoskeletal pain in children Marco Cattalini1, Raju Khubchandani2 and Rolando Cimaz3* Abstract Chronic or recurrent musculoskeletal pain is a common complaint in children. Among the most common causes for this problem are different conditions associated with hypermobility. Pediatricians and allied professionals should be well aware of the characteristics of the different syndromes associated with hypermobility and facilitate early recognition and appropriate management. In this review we provide information on Benign Joint Hypermobility Syndrome, Ehlers-Danlos Syndrome, Marfan Syndrome, Loeys-Dietz syndrome and Stickler syndrome, and discuss their characteristics and clinical management. Keywords: Hyperlaxity, Musculoskeletal pain, Ehlers-Danlos, Marfan, Loeys-Dietz, Stickler Introduction Review Chronic or recurrent musculoskeletal pain is a common Benign joint hypermobility syndrome (BJHS) complaint in children, affecting between 10 % and 20 % Children with hypermobile joints by definition display a of children. It is one of the more frequent reasons for range of movement that is considered excessive, taking seeking a primary care physician’sevaluationandpos- into consideration the age, gender and ethnic background sible rheumatology referral [1, 2]. A wide variety of of the individual. It is estimated that at least 10–15 % of non-inflammatory conditions may cause musculoskel- normal children have hypermobile joints and the term etal pain in the pediatric age, and the most common joint hypermobility syndrome (JHS) is reserved to the causes seen by paediatric rheumatologists include cases of joint hypermobility associated with symptoms conditions associated with hypermobility. -
Inherited Connective Tissue Disorders of Collagens: Lessons from Targeted Mutagenesis
13 Inherited Connective Tissue Disorders of Collagens: Lessons from Targeted Mutagenesis Christelle Bonod-Bidaud and Florence Ruggiero Institut de Génomique Fonctionnelle de Lyon, ENS de Lyon, UMR CNRS 5242, University Lyon 1, France 1. Introduction The extracellular matrix (ECM) is the cell structural environment in tissues and organs. The ECM is a dynamic structure that it is constantly remodelled. It contributes to tissue integrity and mechanical properties. It is also essential for maintaining tissue homeostasis, morphogenesis and differentiation, which it does, through specific interactions with cells. The ECM is composed of a mixture of water and macromolecules classified into four main categories: collagens, proteoglycans, elastic proteins, and non-collagenous glycoproteins (also called adhesive glycoproteins). The nature, concentration and ratio of the different ECM components are all important factors in the regulation of the assembly of complex tissue-specific networks tuned to meet mechanical and biological requirements of tissues. Collagens form a superfamily of 28 trimeric proteins, distinguishable from the other ECM components by their particular abundance in tissues (collagens represent up to 80-90% of total proteins in skin, tendon and bones) and their capacity to self-assemble into supramolecular organized structures (the best known being the banded fibers). The collagen superfamily is highly complex and shows a remarkable diversity in structure, tissue distribution and function (Ricard-Blum and Ruggiero, 2005). The importance -
Genetic Disorder
Genetic disorder Single gene disorder Prevalence of some single gene disorders[citation needed] A single gene disorder is the result of a single mutated gene. Disorder Prevalence (approximate) There are estimated to be over 4000 human diseases caused Autosomal dominant by single gene defects. Single gene disorders can be passed Familial hypercholesterolemia 1 in 500 on to subsequent generations in several ways. Genomic Polycystic kidney disease 1 in 1250 imprinting and uniparental disomy, however, may affect Hereditary spherocytosis 1 in 5,000 inheritance patterns. The divisions between recessive [2] Marfan syndrome 1 in 4,000 and dominant types are not "hard and fast" although the [3] Huntington disease 1 in 15,000 divisions between autosomal and X-linked types are (since Autosomal recessive the latter types are distinguished purely based on 1 in 625 the chromosomal location of Sickle cell anemia the gene). For example, (African Americans) achondroplasia is typically 1 in 2,000 considered a dominant Cystic fibrosis disorder, but children with two (Caucasians) genes for achondroplasia have a severe skeletal disorder that 1 in 3,000 Tay-Sachs disease achondroplasics could be (American Jews) viewed as carriers of. Sickle- cell anemia is also considered a Phenylketonuria 1 in 12,000 recessive condition, but heterozygous carriers have Mucopolysaccharidoses 1 in 25,000 increased immunity to malaria in early childhood, which could Glycogen storage diseases 1 in 50,000 be described as a related [citation needed] dominant condition. Galactosemia -
Blueprint Genetics Vitreoretinopathy Panel
Vitreoretinopathy Panel Test code: OP0701 Is a 24 gene panel that includes assessment of non-coding variants. Is ideal for patients with a clinical suspicion / diagnosis of vitreoretinopathy. The genes on this panel are included in the Retinal Dystropy Panel. About Vitreoretinopathy Vitreoretinal diseases are characterised by the degeneration of the vitreous and retina of the eye. Several types of vitreoretinopathies exist giving rise to a spectrum of phenotypic presentations such as retinal detachment, optically empty vitreous, fibrillary condensation, cataract, and neovascularization. The condition includes familial exudative vitreoretinopathy, snowflake vitreoretinal degeneration, Norrie disease, Wagner syndrome, Stickler syndrome and Knobloch syndrome. The vitreoretinopathies may be inherited in an autosomal dominant, autosomal recessive, or X-linked manner. For instance, autosomal dominant familial exudative vitreoretinopathy (FEVR) is caused by mutations in FZD4; LRP5 has been associated with both autosomal dominant and recessive cases and NDP with X-linked FEVR. The clinical presentation and the disease course can be highly variable. The prevalence of FEVR is unknown, but it is a rare disorder. Availability 4 weeks Gene Set Description Genes in the Vitreoretinopathy Panel and their clinical significance Gene Associated phenotypes Inheritance ClinVar HGMD ATOH7 Persistent hyperplastic primary vitreous, autosomal recessive AR 4 9 BEST1 Vitreoretinochoroidopathy, Microcornea, Rod-cone dystrophy, Posterior AD/AR 62 318 staphyloma, Bestrophinopathy,