From SHIQ and RDF to OWL: the Making of a Web Ontology Language
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A Hierarchical SVG Image Abstraction Layer for Medical Imaging
A Hierarchical SVG Image Abstraction Layer for Medical Imaging Edward Kim1, Xiaolei Huang1, Gang Tan1, L. Rodney Long2, Sameer Antani2 1Department of Computer Science and Engineering, Lehigh University, Bethlehem, PA; 2Communications Engineering Branch, National Library of Medicine, Bethesda, MD ABSTRACT As medical imaging rapidly expands, there is an increasing need to structure and organize image data for efficient analysis, storage and retrieval. In response, a large fraction of research in the areas of content-based image retrieval (CBIR) and picture archiving and communication systems (PACS) has focused on structuring information to bridge the “semantic gap”, a disparity between machine and human image understanding. An additional consideration in medical images is the organization and integration of clinical diagnostic information. As a step towards bridging the semantic gap, we design and implement a hierarchical image abstraction layer using an XML based language, Scalable Vector Graphics (SVG). Our method encodes features from the raw image and clinical information into an extensible “layer” that can be stored in a SVG document and efficiently searched. Any feature extracted from the raw image including, color, texture, orientation, size, neighbor information, etc., can be combined in our abstraction with high level descriptions or classifications. And our representation can natively characterize an image in a hierarchical tree structure to support multiple levels of segmentation. Furthermore, being a world wide web consortium (W3C) standard, SVG is able to be displayed by most web browsers, interacted with by ECMAScript (standardized scripting language, e.g. JavaScript, JScript), and indexed and retrieved by XML databases and XQuery. Using these open source technologies enables straightforward integration into existing systems. -
Towards Ontology Based BPMN Implementation. Sophea Chhun, Néjib Moalla, Yacine Ouzrout
Towards ontology based BPMN Implementation. Sophea Chhun, Néjib Moalla, Yacine Ouzrout To cite this version: Sophea Chhun, Néjib Moalla, Yacine Ouzrout. Towards ontology based BPMN Implementation.. SKIMA, 6th Conference on Software Knowledge Information Management and Applications., Jan 2012, Chengdu, China. 8 p. hal-01551452 HAL Id: hal-01551452 https://hal.archives-ouvertes.fr/hal-01551452 Submitted on 6 Nov 2018 HAL is a multi-disciplinary open access L’archive ouverte pluridisciplinaire HAL, est archive for the deposit and dissemination of sci- destinée au dépôt et à la diffusion de documents entific research documents, whether they are pub- scientifiques de niveau recherche, publiés ou non, lished or not. The documents may come from émanant des établissements d’enseignement et de teaching and research institutions in France or recherche français ou étrangers, des laboratoires abroad, or from public or private research centers. publics ou privés. 1 Towards ontology based BPMN implementation CHHUN Sophea, MOALLA Néjib and OUZROUT Yacine University of Lumiere Lyon2, laboratory DISP, France Natural language is understandable by human and not machine. None technical persons can only use natural language to specify their business requirements. However, the current version of Business process management and notation (BPMN) tools do not allow business analysts to implement their business processes without having technical skills. BPMN tool is a tool that allows users to design and implement the business processes by connecting different business tasks and rules together. The tools do not provide automatic implementation of business tasks from users’ specifications in natural language (NL). Therefore, this research aims to propose a framework to automatically implement the business processes that are expressed in NL requirements. -
A State-Of-The-Art Survey on Semantic Web Mining
Intelligent Information Management, 2013, 5, 10-17 http://dx.doi.org/10.4236/iim.2013.51002 Published Online January 2013 (http://www.scirp.org/journal/iim) A State-of-the-Art Survey on Semantic Web Mining Qudamah K. Quboa, Mohamad Saraee School of Computing, Science, and Engineering, University of Salford, Salford, UK Email: [email protected], [email protected] Received November 9, 2012; revised December 9, 2012; accepted December 16, 2012 ABSTRACT The integration of the two fast-developing scientific research areas Semantic Web and Web Mining is known as Se- mantic Web Mining. The huge increase in the amount of Semantic Web data became a perfect target for many re- searchers to apply Data Mining techniques on it. This paper gives a detailed state-of-the-art survey of on-going research in this new area. It shows the positive effects of Semantic Web Mining, the obstacles faced by researchers and propose number of approaches to deal with the very complex and heterogeneous information and knowledge which are pro- duced by the technologies of Semantic Web. Keywords: Web Mining; Semantic Web; Data Mining; Semantic Web Mining 1. Introduction precisely answer and satisfy the web users’ requests [1,5, 6]. Semantic Web is a part of the second generation web Semantic Web Mining is an integration of two important (Web2.0) and its original idea derived from the vision scientific areas: Semantic Web and Data Mining [1]. Se- W3C’s director and the WWW founder, Sir Tim Berners- mantic Web is used to give a meaning to data, creating complex and heterogeneous data structure, while Data Lee. -
Description Logics Emerge from Ivory Towers Deborah L
Description Logics Emerge from Ivory Towers Deborah L. McGuinness Stanford University, Stanford, CA, 94305 [email protected] Abstract: Description logic (DL) has existed as a field for a few decades yet somewhat recently have appeared to transform from an area of academic interest to an area of broad interest. This paper provides a brief historical perspective of description logic developments that have impacted their usability beyond just in universities and research labs and provides one perspective on the topic. Description logics (previously called terminological logics and KL-ONE-like systems) started with a motivation of providing a formal foundation for semantic networks. The first implemented DL system – KL-ONE – grew out of Brachman’s thesis [Brachman, 1977]. This work was influenced by the work on frame systems but was focused on providing a foundation for building term meanings in a semantically meaningful and unambiguous manner. It rejected the notion of maintaining an ever growing (seemingly adhoc) vocabulary of link and node names seen in semantic networks and instead embraced the notion of a fixed set of domain-independent “epistemological primitives” that could be used to construct complex, structured object descriptions. It included constructs such as “defines-an-attribute-of” as a built-in construct and expected terms like “has-employee” to be higher-level terms built up from the epistemological primitives. Higher level terms such as “has-employee” and “has-part-time-employee” could be related automatically based on term definitions instead of requiring a user to place links between them. In its original incarnation, this led to maintaining the motivation of semantic networks of providing broad expressive capabilities (since people wanted to be able to represent natural language applications) coupled with the motivation of providing a foundation of building blocks that could be used in a principled and well-defined manner. -
The Semantic Web and Its Languages Editor: Dieter Fensel Vrije Universiteit Amsterdam [email protected]
TRENDS & CONTROVERSIES The semantic Web and its languages Editor: Dieter Fensel Vrije Universiteit Amsterdam [email protected] The Web has drastically changed the availability of electronic informa- epistemologically rich modeling primitives, provided by the frame com- tion, but its success and exponential growth have made it increasingly munity; formal semantics and efficient reasoning support, provided by difficult to find, access, present, and maintain such information for a wide description logics; and a standard proposal for syntactical exchange nota- variety of users. In reaction to this bottleneck, many new research initia- tions, provided by the Web community. (See the essay by Frank van tives and commercial enterprises have been set up to enrich available Harmelen and Ian Horrocks.) information with machine-processable semantics. Such support is essen- Another candidate for such a Web-based ontology modeling lan- tial for bringing the Web to its full potential in areas such as knowledge guage is DAML-ONT. The DARPA Agent Markup Language is a management and electronic commerce. This semantic Web will provide major, well-funded initiative, aimed at joining the many ongoing intelligent access to heterogeneous and distributed information, enabling semantic Web efforts and focused on bringing ontologies to the Web. software products (agents) to mediate between user needs and available The DAML language inherits many aspects from OIL, and the capabili- information sources. Early steps in the direction of a semantic Web were ties of the two languages are relatively similar. Both initiatives cooper- SHOE1 and later Ontobroker,2 but now many more projects exist. ate in a Joint EU/US ad hoc Agent Markup Language Committee to Originally, the Web grew mainly around HTML, which provided a achieve a joined language proposal. -
Semantic Description of Web Services
Semantic Description of Web Services Thabet Slimani CS Department, Taif University, P.O.Box 888, 21974, KSA Abstract syntaxes) and in terms of the paradigms proposed for The tasks of semantic web service (discovery, selection, employing these in practice. composition, and execution) are supposed to enable seamless interoperation between systems, whereby human intervention is This paper is dedicated to provide an overview of these kept at a minimum. In the field of Web service description approaches, expressing their classification in terms of research, the exploitation of descriptions of services through commonalities and differences. It provides an semantics is a better support for the life-cycle of Web services. understanding of the technical foundation on which they The large number of developed ontologies, languages of are built. These techniques are classified from a range of representations, and integrated frameworks supporting the research areas including Top-down, Bottom-up and Restful discovery, composition and invocation of services is a good Approaches. indicator that research in the field of Semantic Web Services (SWS) has been considerably active. We provide in this paper a This paper does also provide some grounding that could detailed classification of the approaches and solutions, indicating help the reader perform a more detailed analysis of the their core characteristics and objectives required and provide different approaches which relies on the required indicators for the interested reader to follow up further insights objectives. We provide a little detailed comparison and details about these solutions and related software. between some approaches because this would require Keywords: SWS, SWS description, top-down approaches, addressing them from the perspective of some tasks bottom-up approaches, RESTful services. -
Mapping Between Digital Identity Ontologies Through SISM
Mapping between Digital Identity Ontologies through SISM Matthew Rowe The OAK Group, Department of Computer Science, University of Sheffield, Regent Court, 211 Portobello Street, Sheffield S1 4DP, UK [email protected] Abstract. Various ontologies are available defining the semantics of dig- ital identity information. Due to the rise in use of lowercase semantics, such ontologies are now used to add metadata to digital identity informa- tion within web pages. However concepts exist in these ontologies which are related and must be mapped together in order to enhance machine- readability of identity information on the web. This paper presents the Social identity Schema Mapping (SISM) vocabulary which contains a set of mappings between related concepts in distinct digital identity ontolo- gies using OWL and SKOS mapping constructs. Key words: Semantic Web, Social Web, SKOS, OWL, FOAF, SIOC, PIMO, NCO, Microformats 1 Introduction The semantic web provides a web of machine-readable data. Ontologies form a vital component of the semantic web by providing conceptualisations of domains of knowledge which can then be used to provide a common understanding of some domain. A basic ontology contains a vocabulary of concepts and definitions of the relationships between those concepts. An agent reading a concept from an ontology can look up the concept and discover its properties and characteristics, therefore interpreting how it fits into that particular domain. Due to the great number of ontologies it is common for related concepts to be defined in separate ontologies, these concepts must be identified and mapped together. Web technologies such as Microformats, eRDF and RDFa have allowed web developers to encode lowercase semantics within XHTML pages. -
Description Logics
Description Logics Franz Baader1, Ian Horrocks2, and Ulrike Sattler2 1 Institut f¨urTheoretische Informatik, TU Dresden, Germany [email protected] 2 Department of Computer Science, University of Manchester, UK {horrocks,sattler}@cs.man.ac.uk Summary. In this chapter, we explain what description logics are and why they make good ontology languages. In particular, we introduce the description logic SHIQ, which has formed the basis of several well-known ontology languages, in- cluding OWL. We argue that, without the last decade of basic research in description logics, this family of knowledge representation languages could not have played such an important rˆolein this context. Description logic reasoning can be used both during the design phase, in order to improve the quality of ontologies, and in the deployment phase, in order to exploit the rich structure of ontologies and ontology based information. We discuss the extensions to SHIQ that are required for languages such as OWL and, finally, we sketch how novel reasoning services can support building DL knowledge bases. 1 Introduction The aim of this section is to give a brief introduction to description logics, and to argue why they are well-suited as ontology languages. In the remainder of the chapter we will put some flesh on this skeleton by providing more technical details with respect to the theory of description logics, and their relationship to state of the art ontology languages. More detail on these and other matters related to description logics can be found in [6]. Ontologies There have been many attempts to define what constitutes an ontology, per- haps the best known (at least amongst computer scientists) being due to Gruber: “an ontology is an explicit specification of a conceptualisation” [47].3 In this context, a conceptualisation means an abstract model of some aspect of the world, taking the form of a definition of the properties of important 3 This was later elaborated to “a formal specification of a shared conceptualisation” [21]. -
The Role of Ontology in Information Management
UNLV Retrospective Theses & Dissertations 1-1-2003 The role of ontology in information management Renato de Freitas Marteleto University of Nevada, Las Vegas Follow this and additional works at: https://digitalscholarship.unlv.edu/rtds Repository Citation Marteleto, Renato de Freitas, "The role of ontology in information management" (2003). UNLV Retrospective Theses & Dissertations. 1494. http://dx.doi.org/10.25669/0fz6-zsye This Thesis is protected by copyright and/or related rights. It has been brought to you by Digital Scholarship@UNLV with permission from the rights-holder(s). You are free to use this Thesis in any way that is permitted by the copyright and related rights legislation that applies to your use. For other uses you need to obtain permission from the rights-holder(s) directly, unless additional rights are indicated by a Creative Commons license in the record and/ or on the work itself. This Thesis has been accepted for inclusion in UNLV Retrospective Theses & Dissertations by an authorized administrator of Digital Scholarship@UNLV. For more information, please contact [email protected]. THE ROLE OF ONTOLOGY IN INFORMATION MANAGEMENT by Renato de Ereitas Marteleto Bachelor of Science Universidade Federal de Ouro Preto - Brazil 1999 A thesis submitted in partial fulfillment of the requirements for the Master of Science in Computer Science Department of Computer Science Howard R. Hughes College of Engineering Graduate College University of Nevada, Las Vegas M ay 2003 Reproduced with permission of the copyright owner. Further reproduction prohibited without permission. UMI Number: 1414535 Marteleto, Renato de Freitas All rights reserved. UMI UMI Microform 1414535 Copyright 2003 by ProQuest Information and Learning Company. -
Semantic Web: a Review of the Field Pascal Hitzler [email protected] Kansas State University Manhattan, Kansas, USA
Semantic Web: A Review Of The Field Pascal Hitzler [email protected] Kansas State University Manhattan, Kansas, USA ABSTRACT which would probably produce a rather different narrative of the We review two decades of Semantic Web research and applica- history and the current state of the art of the field. I therefore do tions, discuss relationships to some other disciplines, and current not strive to achieve the impossible task of presenting something challenges in the field. close to a consensus – such a thing seems still elusive. However I do point out here, and sometimes within the narrative, that there CCS CONCEPTS are a good number of alternative perspectives. The review is also necessarily very selective, because Semantic • Information systems → Graph-based database models; In- Web is a rich field of diverse research and applications, borrowing formation integration; Semantic web description languages; from many disciplines within or adjacent to computer science, Ontologies; • Computing methodologies → Description log- and a brief review like this one cannot possibly be exhaustive or ics; Ontology engineering. give due credit to all important individual contributions. I do hope KEYWORDS that I have captured what many would consider key areas of the Semantic Web field. For the reader interested in obtaining amore Semantic Web, ontology, knowledge graph, linked data detailed overview, I recommend perusing the major publication ACM Reference Format: outlets in the field: The Semantic Web journal,1 the Journal of Pascal Hitzler. 2020. Semantic Web: A Review Of The Field. In Proceedings Web Semantics,2 and the proceedings of the annual International of . ACM, New York, NY, USA, 7 pages. -
Practical Reasoning in Probabilistic Description Logic
PRACTICAL REASONING IN PROBABILISTIC DESCRIPTION LOGIC A thesis submitted to the University of Manchester for the degree of Doctor of Philosophy in the Faculty of Engineering and Physical Sciences 2011 By Pavel Klinov School of Computer Science 2 Contents Abstract 9 Declaration 10 Copyright 11 Acknowledgments 12 1 Introduction 13 1.1 Description Logic and Ontologies . 13 1.1.1 Description Logic: From Semantic Nets to OWL 2 . 14 1.1.2 Ontologies at Work . 15 1.2 Uncertainty . 16 1.2.1 Uncertainty: Ubiquitous and Versatile . 16 1.2.2 Uncertainty vs. Vagueness . 18 1.3 P-SROIQ and Pronto Reasoner . 18 1.4 Objectives . 20 1.5 Thesis Structure . 20 2 Background and Related Work 22 2.1 Description Logic . 22 2.1.1 Syntax and Semantics . 22 2.1.2 Reasoning Problems and Complexity . 25 2.1.3 The Web Ontology Language . 26 2.2 Representation and Reasoning About Uncertainty . 26 2.2.1 Knowledge Based Model Construction . 27 2.2.2 Probabilistic Logics . 34 2.3 P-SROIQ: A Probabilistic Description Logic . 48 2.3.1 Syntax and Semantics . 48 2.3.2 Reasoning Problems . 51 2.3.3 Original Algorithms . 53 3 2.3.4 Note on Probabilistic Coherence . 57 2.4 Related Work . 58 2.4.1 Propositional PSAT Solvers . 59 2.4.2 NMPROBLOG and ContraBovemRufum . 61 3 Applications and Case Studies 62 3.1 Breast Cancer Risk Assessment Problem . 62 3.1.1 Risk Types and Assessment . 63 3.1.2 Existing Tools and Models . 65 3.1.3 The BCRA Problem and P-SROIQ ............... -
Ontology and Information Systems
Ontology and Information Systems 1 Barry Smith Philosophical Ontology Ontology as a branch of philosophy is the science of what is, of the kinds and structures of objects, properties, events, processes and relations in every area of reality. ‘Ontology’ is often used by philosophers as a synonym for ‘metaphysics’ (literally: ‘what comes after the Physics’), a term which was used by early students of Aristotle to refer to what Aristotle himself called ‘first philosophy’.2 The term ‘ontology’ (or ontologia) was itself coined in 1613, independently, by two philosophers, Rudolf Göckel (Goclenius), in his Lexicon philosophicum and Jacob Lorhard (Lorhardus), in his Theatrum philosophicum. The first occurrence in English recorded by the OED appears in Bailey’s dictionary of 1721, which defines ontology as ‘an Account of being in the Abstract’. Methods and Goals of Philosophical Ontology The methods of philosophical ontology are the methods of philosophy in general. They include the development of theories of wider or narrower scope and the testing and refinement of such theories by measuring them up, either against difficult 1 This paper is based upon work supported by the National Science Foundation under Grant No. BCS-9975557 (“Ontology and Geographic Categories”) and by the Alexander von Humboldt Foundation under the auspices of its Wolfgang Paul Program. Thanks go to Thomas Bittner, Olivier Bodenreider, Anita Burgun, Charles Dement, Andrew Frank, Angelika Franzke, Wolfgang Grassl, Pierre Grenon, Nicola Guarino, Patrick Hayes, Kathleen Hornsby, Ingvar Johansson, Fritz Lehmann, Chris Menzel, Kevin Mulligan, Chris Partridge, David W. Smith, William Rapaport, Daniel von Wachter, Chris Welty and Graham White for helpful comments.