Energetics at the Molecular Level Douglas R Moellering, Ph.D
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Comparing Aerobic Vs. Anaerobic Respiration
Comparing Aerobic vs. Anaerobic Respiration Objective: Students will compare the two types of cellular respiration: aerobic respiration and anaerobic respiration (fermentation). Students will note similarities and differences between the two processes including when, where, and how each process occurs. Students will develop a concept map using Inspiration indicating the criteria for aerobic and anaerobic respiration. This concept map will indicate: Three similarities between the two processes. Two types of cells that perform each process. Location in the cell where each process occurs. Oxygen requirements for each process. Reactants and products for each process. Energy output for each process. Two different types of anaerobic respiration. Reactants and products for each. Types of cells that perform each process. Introduction: This activity will follow a fermentation (anaerobic respiration) lab using yeast. This lab will address the process of alcoholic fermentation. Students will perform push-ups to experience lactic acid build-up in muscle cells. These activities will gain interest in the process of anaerobic respiration. Students will have already studied the detailed process of aerobic cellular respiration. Procedure: Students will work in pairs or trios to answer questions (as seen in benchmarks) on aerobic and anaerobic respiration. Students will use previous notes and lab activities to summarize main ideas for aerobic and anaerobic respiration. Individually, students will create a concept map using Inspiration to further integrate and separate the two processes. Accommodations: Instructions will be provided in written format as well as read orally. Instructions will also be on an overhead. One example will be provided for students on how to summarize data. -
Cellular Respiration +
Reference 3 Cellular Respiration Cellular respiration is a critical biochemical process for life on Earth. All cells require a continuous supply of energy to maintain order, build organic molecules, grow, and carry on all their other activities. Plants and other organisms can recover the solar energy stored in the molecular bonds of glucose by breaking down the sugar. Energy can then be stored in the bonds of ATP, which is used for a variety of processes that a cell must carry out to live. Cellular respiration is the most efficient way that glucose can be broken down to generate energy for other cellular reactions. In a sense, cellular respiration can be thought of as a type of controlled burning. When something is burned, a great deal of energy is released. The process requires oxygen and releases carbon dioxide and water and produces ATP. Cellular respiration can be summarized as: C6H12O6 + 6 O2 6 CO2 + 6 H2O + 32 ATP & heat carbohydrate oxygen carbon dioxide water energy During cellular respiration, the energy stored in a glucose molecule is released slowly as the molecule is broken down (figure R3.1). Cellular respiration occurs in three phases. In the first steps, known as glycolysis, glucose is split into two 3- carbon molecules. This releases energy, some of which is transferred to ATP. Glycolysis takes place in the cell cytoplasm. The second stage is called the Krebs cycle. During the Krebs cycle, each of the 3-carbon molecules is disassembled in a series of reactions to form six carbon dioxide molecules. Hydrogen atoms are also released. -
Energy Metabolism: Gluconeogenesis and Oxidative Phosphorylation
International Journal for Innovation Education and Research www.ijier.net Vol:-8 No-09, 2020 Energy metabolism: gluconeogenesis and oxidative phosphorylation Luis Henrique Almeida Castro ([email protected]) PhD in the Health Sciences Graduate Program, Federal University of Grande Dourados Dourados, Mato Grosso do Sul – Brazil. Leandro Rachel Arguello Dom Bosco Catholic University Campo Grande, Mato Grosso do Sul – Brazil. Nelson Thiago Andrade Ferreira Motion Science Graduate Program, Federal University of Mato Grosso do Sul Campo Grande, Mato Grosso do Sul – Brazil. Geanlucas Mendes Monteiro Heath and Development in West Central Region Graduate Program, Federal University of Mato Grosso do Sul Campo Grande, Mato Grosso do Sul – Brazil. Jessica Alves Ribeiro Federal University of Mato Grosso do Sul Campo Grande, Mato Grosso do Sul – Brazil. Juliana Vicente de Souza Motion Science Graduate Program, Federal University of Mato Grosso do Sul Campo Grande, Mato Grosso do Sul – Brazil. Sarita Baltuilhe dos Santos Motion Science Graduate Program, Federal University of Mato Grosso do Sul Campo Grande, Mato Grosso do Sul – Brazil. Fernanda Viana de Carvalho Moreto MSc., Nutrition, Food and Health Graduate Program, Federal University of Grande Dourados Dourados, Mato Grosso do Sul – Brazil. Ygor Thiago Cerqueira de Paula Motion Science Graduate Program, Federal University of Mato Grosso do Sul Campo Grande, Mato Grosso do Sul – Brazil. International Educative Research Foundation and Publisher © 2020 pg. 359 International Journal for Innovation Education and Research ISSN 2411-2933 September 2020 Vanessa de Souza Ferraz Motion Science Graduate Program, Federal University of Mato Grosso do Sul Campo Grande, Mato Grosso do Sul – Brazil. Tayla Borges Lino Motion Science Graduate Program, Federal University of Mato Grosso do Sul Campo Grande, Mato Grosso do Sul – Brazil. -
Effect of Citric Acid Cycle Genetic Variants and Their Interactions With
cancers Article Effect of Citric Acid Cycle Genetic Variants and Their Interactions with Obesity, Physical Activity and Energy Intake on the Risk of Colorectal Cancer: Results from a Nested Case-Control Study in the UK Biobank Sooyoung Cho 1 , Nan Song 2,3 , Ji-Yeob Choi 2,4,5 and Aesun Shin 1,2,* 1 Department of Preventive Medicine, Seoul National University College of Medicine, Seoul 03080, Korea; [email protected] 2 Cancer Research Institute, Seoul National University, Seoul 03080, Korea; [email protected] (N.S.); [email protected] (J.-Y.C.) 3 Department of Epidemiology and Cancer Control, St. Jude Children’s Research Hospital, Memphis, TN 38105, USA 4 Department of Biomedical Sciences, Graduate School of Seoul National University, Seoul 03080, Korea 5 Medical Research Center, Institute of Health Policy and Management, Seoul National University, Seoul 03080, Korea * Correspondence: [email protected]; Tel.: +82-2-740-8331; Fax: +82-2-747-4830 Received: 18 August 2020; Accepted: 9 October 2020; Published: 12 October 2020 Simple Summary: The citric acid cycle has a central role in the cellular energy metabolism and biosynthesis of macromolecules in the mitochondrial matrix. We identified the single nucleotide polymorphisms (SNPs) of the citrate acid cycle with colorectal cancer susceptibility in UK population. Furthermore, we found the significant interaction of SNPs in the citric acid cycle with the contributors to energy balance and SNP-SNP interactions. Our findings provide clues to the etiology in cancer development related to energy metabolism and evidence on identification of the population at high risk of colorectal cancer. -
Nutrition and Metabolism
NUTRITION AND METABOLISM Metabolism - the sum of the chemical changes that occur in the cell and involve the breakdown (catabolism) and synthesis (anabolism) of stored energy sources. Basal Metabolic Rate is dened as the rate of energy production by the body measured under a dened set of conditions which is usually at rest (physical and mental), room temperature, 12 hours after a meal. The result is produced as a percentage of a standard value which is derived from studies of normal healthy people. Measurement of the metabolic rate takes place using a method called calorimetry. This may be done directly by measuring the amount of heat produced by the body in an Atwater chamber, the metabolic rate is the amount of heat produced per hour. More commonly the metabolic rate is determined indirectly by putting people on a closed circuit breathing system, with CO2 removed by a soda lime scrubber and the rate of oxygen consumption measured by change in volume. Oxygen consumption is proportional to the metabolic rate because most of the energy in the body is derived from oxidative phosphorylation, which uses a set amount of oxygen to produce a set amount of energy. For every litre of oxygen consumed the body produces (uses) 4.82 kcals of energy. If the oxygen consumption is 250ml/min (15L/hr) then the metabolic rate is 72.3 kcals/hr. This is often further rened by dividing the gure by the body surface area which for a 70kg male is 1.73m2. This gives an average BMR of approximately 40 kcal/m2/hr. -
What Activates Thermogenesis When Lipid Droplet Lipolysis Is Absent in Brown Adipocytes?
ADIPOCYTE 2018, VOL. 7, NO. 2, 143–147 https://doi.org/10.1080/21623945.2018.1453769 COMMENTARY What activates thermogenesis when lipid droplet lipolysis is absent in brown adipocytes? Hyunsu Shina, Hang Shib, Bingzhong Xue b, and Liqing Yu a aCenter for Molecular and Translational Medicine, Institute for Biomedical Sciences, Georgia State University, Atlanta, GA, USA; bDepartment of Biology, Georgia State University, Atlanta, GA, USA ABSTRACT ARTICLE HISTORY Cold exposure activates the sympathetic nervous system. It is generally thought that this Received 18 February 2018 sympathetic activation induces heat production by stimulating lipolysis of cytosolic lipid droplets Accepted 12 March 2018 (LDs) in brown adipocytes. However, this concept was not examined in vivo due to lack KEYWORDS of appropriate animal models. Recently, we and others have demonstrated that LD lipolysis in Brown adipose tissue; fatty brown adipocytes is not required for cold-induced nonshivering thermogenesis. Our studies acid; glucose; sympathetic uncovered an essential role of white adipose tissue (WAT) lipolysis in fueling thermogenesis during innervation; uncoupling fasting. In addition, we showed that lipolysis deficiency in brown adipose tissue (BAT) induces WAT protein 1; white adipose browning. This commentary further discusses the significance of our findings and how whole body tissue browning may be heated up without BAT lipolysis. Introduction in BAT and were cold intolerant [6,7]. Up-regulation of Hormone Sensitive Lipase (HSL) via ablation of SERTA The recent re-discovery of brown adipose tissue (BAT) domain containing 2 (TRIP-Br2), or lipolysis de-repres- in human adults has generated enormous interest in sion via deletion of a lipolytic suppressor called G0/G1 mechanisms for non-shivering thermogenesis (NST) switch protein 2 (G0S2) [8], was associated with activa- because BAT and NST may be targeted to prevent obe- tion of the thermogenic program [9,10]. -
Functional Relationship of Thyroid Hormone-Induced Lipogenesis, Lipolysis, and Thermogenesis in the Rat
Functional relationship of thyroid hormone-induced lipogenesis, lipolysis, and thermogenesis in the rat. J H Oppenheimer, … , J T Lane, M P Thompson J Clin Invest. 1991;87(1):125-132. https://doi.org/10.1172/JCI114961. Research Article Metabolic balance studies were carried out to determine the interrelationships of thyroid hormone-induced lipogenesis, lipolysis, and energy balance in the free-living rat. Intraperitoneal doses of 15 micrograms triiodothyronine (T3)/100 g body wt per d caused an increase in caloric intake from 26.5 +/- 1.7 (mean +/- SEM) kcal/100 g per d to 38.1 +/- 1.5 kcal/100 g per d. Food intake, however, rose only after 4-6 d of treatment and was maximal by the 8th day. In contrast, total body basal oxygen consumption rose by 24 h and reached a maximum by 4 d. Since total urinary nitrogen excretion and hepatic phosphoenolpyruvate carboxykinase mRNA did not rise, gluconeogenesis from protein sources did not supply the needed substrate for the early increase in calorigenesis. Total body fat stores fell approximately 50% by the 6th day of treatment and could account for the entire increase in caloric expenditure during the initial period of T3 treatment. Total body lipogenesis increased within 1 d and reached a plateau 4-5 d after the start of T3 treatment. 15-19% of the increased caloric intake was channeled through lipogenesis, assuming glucose to be the sole substrate for lipogenesis. The metabolic cost of the increased lipogenesis, however, accounted for only 3-4% of the T3-induced increase in calorigenesis. These results suggest that fatty acids derived from adipose tissue are […] Find the latest version: https://jci.me/114961/pdf Functional Relationship of Thyroid Hormone-induced Lipogenesis, Lipolysis, and Thermogenesis in the Rat Jack H. -
Cellular Respiration Process by Which Cells Transfer Energy from Food To
Cellular Respiration Process by which cells transfer energy from food to ATP Cells rely heavily on Oxygen Can be Aerobic or Anaerobic Brain cells cannot produce energy anaerobicly Heart Cells have a minimal ability to produce energy anaerobicly Glycolysis, Krebs cycle, Electron Transport Carb Metabolism Only food the can create energy through Anaerobic metabolism Preferred food of the body, uses least amount of oxygen Glucose- 6-carbon sugar C6H12O6 Break down= Glucose + Oxygen = Water + Carbon Dioxide + Energy Excess Glucose stored as Glycogen stored in the liver & muscles Stage 1- Glycolysis Prepares glucose to enter the next stage Converts Glucose to Pyruvic Acid (Aerobic) or Lactic Acid (Anaerobic) ATP is produced 2 ATP used in the first steps (Only 1 if glycogen) 2 ATP produced end steps 2 NAD FAD & NAD similar to a taxi (Transport Oxygen) 6 Carbon Glucose broken down to 2 3-carbon cells Lactic Acid- Glycogen (Anaerobic) Pyruvic acid- Glucose (Aerobic) Stage 2- Formation of Acetyl Coenzyme A Converts Pyruvate to Acetyl Coenzyme A No ATP is used or produced 2 NAD (4 NAD) Stage 3- Krebs Cycle Begins & ends with the same substance No ATP is used 2 ATP Made (2 Cells) Hydrogen’s spilt for Electron Transport 6 NAD Stage 4- Electron Transport System Hydrogen taken from FAD & NAD to make water Electrons are dropped off and then pick up- repeats 3 times One ATP for each for each pair of Hydrogen’s Each NAD makes 3ATP Each FAD makes 2 ATP Total Stage 1 – Glycolysis-2 ATP, NAD but can’t be used in skeletal muscle (FAD uses electron in skeletal -
Identification of Alternative Mitochondrial Electron Transport
International Journal of Molecular Sciences Article Identification of Alternative Mitochondrial Electron Transport Pathway Components in Chickpea Indicates a Differential Response to Salinity Stress between Cultivars Crystal Sweetman * , Troy K. Miller, Nicholas J. Booth, Yuri Shavrukov , Colin L.D. Jenkins, Kathleen L. Soole and David A. Day College of Science & Engineering, Flinders University, GPO Box 5100, Adelaide SA 5001, Australia; troy.miller@flinders.edu.au (T.K.M.); nick.booth@flinders.edu.au (N.J.B.); yuri.shavrukov@flinders.edu.au (Y.S.); colin.jenkins@flinders.edu.au (C.L.D.J.); kathleen.soole@flinders.edu.au (K.L.S.); david.day@flinders.edu.au (D.A.D.) * Correspondence: crystal.sweetman@flinders.edu.au; Tel.: +61-8-82012790 Received: 25 April 2020; Accepted: 27 May 2020; Published: 28 May 2020 Abstract: All plants contain an alternative electron transport pathway (AP) in their mitochondria, consisting of the alternative oxidase (AOX) and type 2 NAD(P)H dehydrogenase (ND) families, that are thought to play a role in controlling oxidative stress responses at the cellular level. These alternative electron transport components have been extensively studied in plants like Arabidopsis and stress inducible isoforms identified, but we know very little about them in the important crop plant chickpea. Here we identify AP components in chickpea (Cicer arietinum) and explore their response to stress at the transcript level. Based on sequence similarity with the functionally characterized proteins of Arabidopsis thaliana, five putative internal (matrix)-facing NAD(P)H dehydrogenases (CaNDA1-4 and CaNDC1) and four putative external (inter-membrane space)-facing NAD(P)H dehydrogenases (CaNDB1-4) were identified in chickpea. -
(12) Patent Application Publication (10) Pub. No.: US 2014/0155567 A1 Burk Et Al
US 2014O155567A1 (19) United States (12) Patent Application Publication (10) Pub. No.: US 2014/0155567 A1 Burk et al. (43) Pub. Date: Jun. 5, 2014 (54) MICROORGANISMS AND METHODS FOR (60) Provisional application No. 61/331,812, filed on May THE BIOSYNTHESIS OF BUTADENE 5, 2010. (71) Applicant: Genomatica, Inc., San Diego, CA (US) Publication Classification (72) Inventors: Mark J. Burk, San Diego, CA (US); (51) Int. Cl. Anthony P. Burgard, Bellefonte, PA CI2P 5/02 (2006.01) (US); Jun Sun, San Diego, CA (US); CSF 36/06 (2006.01) Robin E. Osterhout, San Diego, CA CD7C II/6 (2006.01) (US); Priti Pharkya, San Diego, CA (52) U.S. Cl. (US) CPC ................. CI2P5/026 (2013.01); C07C II/I6 (2013.01); C08F 136/06 (2013.01) (73) Assignee: Genomatica, Inc., San Diego, CA (US) USPC ... 526/335; 435/252.3:435/167; 435/254.2: (21) Appl. No.: 14/059,131 435/254.11: 435/252.33: 435/254.21:585/16 (22) Filed: Oct. 21, 2013 (57) ABSTRACT O O The invention provides non-naturally occurring microbial Related U.S. Application Data organisms having a butadiene pathway. The invention addi (63) Continuation of application No. 13/101,046, filed on tionally provides methods of using Such organisms to produce May 4, 2011, now Pat. No. 8,580,543. butadiene. Patent Application Publication Jun. 5, 2014 Sheet 1 of 4 US 2014/O155567 A1 ?ueudos!SMS |?un61– Patent Application Publication Jun. 5, 2014 Sheet 2 of 4 US 2014/O155567 A1 VOJ OO O Z?un61– Patent Application Publication US 2014/O155567 A1 {}}} Hººso Patent Application Publication Jun. -
Tricarboxylic Acid (TCA) Cycle Intermediates: Regulators of Immune Responses
life Review Tricarboxylic Acid (TCA) Cycle Intermediates: Regulators of Immune Responses Inseok Choi , Hyewon Son and Jea-Hyun Baek * School of Life Science, Handong Global University, Pohang, Gyeongbuk 37554, Korea; [email protected] (I.C.); [email protected] (H.S.) * Correspondence: [email protected]; Tel.: +82-54-260-1347 Abstract: The tricarboxylic acid cycle (TCA) is a series of chemical reactions used in aerobic organisms to generate energy via the oxidation of acetylcoenzyme A (CoA) derived from carbohydrates, fatty acids and proteins. In the eukaryotic system, the TCA cycle occurs completely in mitochondria, while the intermediates of the TCA cycle are retained inside mitochondria due to their polarity and hydrophilicity. Under cell stress conditions, mitochondria can become disrupted and release their contents, which act as danger signals in the cytosol. Of note, the TCA cycle intermediates may also leak from dysfunctioning mitochondria and regulate cellular processes. Increasing evidence shows that the metabolites of the TCA cycle are substantially involved in the regulation of immune responses. In this review, we aimed to provide a comprehensive systematic overview of the molecular mechanisms of each TCA cycle intermediate that may play key roles in regulating cellular immunity in cell stress and discuss its implication for immune activation and suppression. Keywords: Krebs cycle; tricarboxylic acid cycle; cellular immunity; immunometabolism 1. Introduction The tricarboxylic acid cycle (TCA, also known as the Krebs cycle or the citric acid Citation: Choi, I.; Son, H.; Baek, J.-H. Tricarboxylic Acid (TCA) Cycle cycle) is a series of chemical reactions used in aerobic organisms (pro- and eukaryotes) to Intermediates: Regulators of Immune generate energy via the oxidation of acetyl-coenzyme A (CoA) derived from carbohydrates, Responses. -
Citric Acid Cycle
CHEM464 / Medh, J.D. The Citric Acid Cycle Citric Acid Cycle: Central Role in Catabolism • Stage II of catabolism involves the conversion of carbohydrates, fats and aminoacids into acetylCoA • In aerobic organisms, citric acid cycle makes up the final stage of catabolism when acetyl CoA is completely oxidized to CO2. • Also called Krebs cycle or tricarboxylic acid (TCA) cycle. • It is a central integrative pathway that harvests chemical energy from biological fuel in the form of electrons in NADH and FADH2 (oxidation is loss of electrons). • NADH and FADH2 transfer electrons via the electron transport chain to final electron acceptor, O2, to form H2O. Entry of Pyruvate into the TCA cycle • Pyruvate is formed in the cytosol as a product of glycolysis • For entry into the TCA cycle, it has to be converted to Acetyl CoA. • Oxidation of pyruvate to acetyl CoA is catalyzed by the pyruvate dehydrogenase complex in the mitochondria • Mitochondria consist of inner and outer membranes and the matrix • Enzymes of the PDH complex and the TCA cycle (except succinate dehydrogenase) are in the matrix • Pyruvate translocase is an antiporter present in the inner mitochondrial membrane that allows entry of a molecule of pyruvate in exchange for a hydroxide ion. 1 CHEM464 / Medh, J.D. The Citric Acid Cycle The Pyruvate Dehydrogenase (PDH) complex • The PDH complex consists of 3 enzymes. They are: pyruvate dehydrogenase (E1), Dihydrolipoyl transacetylase (E2) and dihydrolipoyl dehydrogenase (E3). • It has 5 cofactors: CoASH, NAD+, lipoamide, TPP and FAD. CoASH and NAD+ participate stoichiometrically in the reaction, the other 3 cofactors have catalytic functions.