Regulation of Post-Mortem Glycolysis in Ruminant Muscle
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Wnt Signaling in Vertebrate Neural Development and Function
J Neuroimmune Pharmacol (2012) 7:774–787 DOI 10.1007/s11481-012-9404-x INVITED REVIEW Wnt Signaling in Vertebrate Neural Development and Function Kimberly A. Mulligan & Benjamin N. R. Cheyette Received: 18 June 2012 /Accepted: 10 September 2012 /Published online: 27 September 2012 # Springer Science+Business Media, LLC 2012 Abstract Members of the Wnt family of secreted signaling immature neurons migrate to populate different cortical proteins influence many aspects of neural development and layers, nuclei, and ganglia in the forebrain, midbrain, hind- function. Wnts are required from neural induction and axis brain, and spinal cord. Each mature neuron elaborates an formation to axon guidance and synapse development, and axon and numerous dendrites while forming hundreds to even help modulate synapse activity. Wnt proteins activate a thousands of synapses with other neurons, enabling electro- variety of downstream signaling pathways and can induce a chemical communication throughout the nervous system. similar variety of cellular responses, including gene tran- All these developmental processes must be coordinated to scription changes and cytoskeletal rearrangements. This re- ensure proper construction and function of the CNS, and view provides an introduction to Wnt signaling pathways this requires the coordinated developmental activity of a and discusses current research on their roles in vertebrate vast array of genes. neural development and function. Members of the Wnt family of secreted signaling proteins are implicated in every step of neural development men- Keywords Wnt signaling . Neural development . tioned above. Wnt proteins provide positional information CNS patterning . Axon guidance . Dendrite growth . within the embryo for anterior-posterior axis specification of Synapse formation . -
Genetic Control of Apigenin Di-C-Glycoside Biosynthesis in Bread Wheat Grain and Their Role
Genetic control of Apigenin di-C-glycoside biosynthesis in bread wheat grain and their role as yellow pigments of Asian alkaline noodles Submitted by Grace Yasmein Wijaya This thesis is submitted to Faculty of Sciences in fulfilment of the requirements for the degree Doctor of Philosophy Faculty of Science The University of Adelaide November 2012 This book is An Answer to Prayers of a Long list of Believers I have been very blessed and loved with all of your spiritual supports, for His guidance and protections, and sincerely will not have enough to thank you all..... May you all be blessed and loved, too As I have been always, yasmein Table of Content Table of Content i List of Tables x List of Figures xiii List of Supplemental Materials xxv Summary xxx Statement of Authorship xxxiv List of Publications xxxv Acknowledgement xxxvi List of Abbreviations xxxix Chapter I: General Introduction 1 1.1 Background 1 1.2 Knowledge Gap 2 1.3 Structure of thesis 2 Chapter II: Literature review 4 2.1 Asian noodles as one of the major end-products of Australian bread wheat 4 2.2 Yellow colour of YAN 5 2.2.1 Natural Compounds that contribute to the yellow colour of YAN 5 2.2.1.1 Types of natural compounds that contributes to the yellow colour of YAN and their roles in plants and human health 5 2.2.1.2 Contribution of xanthophylls and ACGs to the yellow colour of alkaline noodles 8 2.2.2 Factors influencing the measurement of the yellowness of noodles and the content of xanthophyll and ACG in wheat grain 10 i 2.2.3 The amount, tissue location and composition -
Maize (Zea Mays L.) Nucleoskeletal Proteins Regulate Nuclear Envelope 2 Remodeling and Function in Stomatal Complex Development and Pollen Viability
bioRxiv preprint doi: https://doi.org/10.1101/2020.12.23.424208; this version posted December 24, 2020. The copyright holder for this preprint (which was not certified by peer review) is the author/funder, who has granted bioRxiv a license to display the preprint in perpetuity. It is made available under aCC-BY-NC-ND 4.0 International license. 1 Maize (Zea mays L.) nucleoskeletal proteins regulate nuclear envelope 2 remodeling and function in stomatal complex development and pollen viability. 3 McKenna JF*✝, Gumber HK*, Turpin ZM, Jalovec AM, Kartick AC, Graumann K#, and 4 Bass HW# 5 *co-first authors, equal contributions 6 # co-corresponding authors 7 8 email addresses: 9 10 Joseph F. McKenna, [email protected], Department of Biological and 11 Medical Sciences, Oxford Brookes University, Oxford, UK 12 ✝ Current address: [email protected], School of Life Sciences, University 13 of Warwick, Coventry, CV4 7AL, UK, ORCID 0000-0003-4838-6048 14 15 Hardeep K. Gumber, [email protected], Department of Biological Science, Florida 16 State University, Tallahassee, FL, USA, ORCID 0000-0001-5250-7207 17 18 Zachary M. Turpin, [email protected], Department of Biological Science, Florida State 19 University, Tallahassee, FL, USA 20 21 Alexis M. Jalovec, [email protected], Department of Biological Science, Florida State 22 University, Tallahassee, FL, USA 23 24 Andre C. Kartick, [email protected], Department of Biological Science, Florida State 25 University, Tallahassee, FL, USA 26 Katja Graumann, [email protected], Department of Biological and Medical 27 Sciences, Oxford Brookes University, Oxford, UK 28 Hank W. -
Evolutionary Genomics of a Plastic Life History Trait: Galaxias Maculatus Amphidromous and Resident Populations
EVOLUTIONARY GENOMICS OF A PLASTIC LIFE HISTORY TRAIT: GALAXIAS MACULATUS AMPHIDROMOUS AND RESIDENT POPULATIONS by María Lisette Delgado Aquije Submitted in partial fulfilment of the requirements for the degree of Doctor of Philosophy at Dalhousie University Halifax, Nova Scotia August 2021 Dalhousie University is located in Mi'kma'ki, the ancestral and unceded territory of the Mi'kmaq. We are all Treaty people. © Copyright by María Lisette Delgado Aquije, 2021 I dedicate this work to my parents, María and José, my brothers JR and Eduardo for their unconditional love and support and for always encouraging me to pursue my dreams, and to my grandparents Victoria, Estela, Jesús, and Pepe whose example of perseverance and hard work allowed me to reach this point. ii TABLE OF CONTENTS LIST OF TABLES ............................................................................................................ vii LIST OF FIGURES ........................................................................................................... ix ABSTRACT ...................................................................................................................... xii LIST OF ABBREVIATION USED ................................................................................ xiii ACKNOWLEDGMENTS ................................................................................................ xv CHAPTER 1. INTRODUCTION ....................................................................................... 1 1.1 Galaxias maculatus .................................................................................................. -
DIXDC1 Contributes to Psychiatric Susceptibility by Regulating Dendritic Spine and Glutamatergic Synapse Density Via GSK3 and Wnt/Β-Catenin Signaling
DIXDC1 contributes to psychiatric susceptibility by regulating dendritic spine and glutamatergic synapse density via GSK3 and Wnt/β-catenin signaling The Harvard community has made this article openly available. Please share how this access benefits you. Your story matters Citation Martin, P., R. E. Stanley, A. P. Ross, A. E. Freitas, C. E. Moyer, A. C. Brumback, J. Iafrati, et al. 2016. “DIXDC1 contributes to psychiatric susceptibility by regulating dendritic spine and glutamatergic synapse density via GSK3 and Wnt/β-catenin signaling.” Molecular psychiatry :10.1038/mp.2016.184. doi:10.1038/mp.2016.184. http:// dx.doi.org/10.1038/mp.2016.184. Published Version doi:10.1038/mp.2016.184 Citable link http://nrs.harvard.edu/urn-3:HUL.InstRepos:32630523 Terms of Use This article was downloaded from Harvard University’s DASH repository, and is made available under the terms and conditions applicable to Other Posted Material, as set forth at http:// nrs.harvard.edu/urn-3:HUL.InstRepos:dash.current.terms-of- use#LAA HHS Public Access Author manuscript Author ManuscriptAuthor Manuscript Author Mol Psychiatry Manuscript Author . Author Manuscript Author manuscript; available in PMC 2017 April 19. DIXDC1 contributes to psychiatric susceptibility by regulating dendritic spine and glutamatergic synapse density via GSK3 and Wnt/β-catenin signaling Pierre-Marie Martin#1, Robert E. Stanley#1,2, Adam P. Ross#1, Andiara E. Freitas#1, Caitlin E. Moyer3, Audrey C. Brumback1,4, Jillian Iafrati1, Kristina S. Stapornwongkul1, Sky Dominguez1, Saul Kivimäe1, Kimberly A. Mulligan1,5, Mehdi Pirooznia6, W. Richard McCombie7, James B. Potash8, Peter P. Zandi9, Shaun M. -
Thesis Was Carried out at the Centre for Geobiology and Department of Biology at the University of Bergen
The Arctic Mid-Ocean Ridge Vent Fields – A valuable Resource for Marine Bioprospecting? Juliane Wissuwa Dissertation for the degree of philosophiae doctor (PhD) at the University of Bergen 2016 Dissertation date: May 25th 2016 © Copyright Juliane Wissuwa The material in this publication is protected by copyright law. Year: 2016 Title: The Arctic Mid-Ocean Ridge Vent Fields – A valuable Resource for Marine Bioprospecting? Author: Juliane Wissuwa Print: AiT Bjerch AS / University of Bergen ŝŝŝ Contents Scientific environment .............................................................................................................. v Acknowledgements .................................................................................................................. vi Abstract .................................................................................................................................. viii Abbreviations ............................................................................................................................ x List of Publications .................................................................................................................. xi 1. Introduction ....................................................................................................................... 1 1.1 Background ................................................................................................................ 1 1.2 Enzymes from extremophiles and their biotechnological application ...................... -
PIP3-Phldb2 Is Crucial for LTP Regulating Synaptic NMDA and AMPA Receptor Density and PSD95 Turnover
国立大学法人電気通信大学 / The University of Electro-Communications PIP3-Phldb2 is crucial for LTP regulating synaptic NMDA and AMPA receptor density and PSD95 turnover 著者(英) Min-Jue Xie, Yasuyuki Ishikawa, Hideshi Yagi, Tokuichi Iguchi, Yuichiro Oka, Kazuki Kuroda, Keiko Iwata, Hiroshi Kiyonari, Shinji Matsuda, Hideo Matsuzaki, Michisuke Yuzaki, Yugo Fukazawa, Makoto Sato journal or Scientific Reports publication title volume 9 number 1 page range 4305 year 2019-03-13 URL http://id.nii.ac.jp/1438/00009269/ doi: 10.1038/s41598-019-40838-6 Creative Commons Attribution 4.0 International License www.nature.com/scientificreports OPEN PIP3-Phldb2 is crucial for LTP regulating synaptic NMDA and AMPA receptor density and PSD95 Received: 1 November 2018 Accepted: 11 February 2019 turnover Published: xx xx xxxx Min-Jue Xie1,2,3,4,5, Yasuyuki Ishikawa6,7, Hideshi Yagi1,8, Tokuichi Iguchi1,9, Yuichiro Oka1,5,9, Kazuki Kuroda1,2,4, Keiko Iwata3,4,5, Hiroshi Kiyonari10, Shinji Matsuda11,12,13, Hideo Matsuzaki3,5, Michisuke Yuzaki 11, Yugo Fukazawa 2,3,4 & Makoto Sato 1,3,5,9 The essential involvement of phosphoinositides in synaptic plasticity is well-established, but incomplete knowledge of the downstream molecular entities prevents us from understanding their signalling cascades completely. Here, we determined that Phldb2, of which pleckstrin-homology domain is highly sensitive to PIP3, functions as a phosphoinositide-signalling mediator for synaptic plasticity. BDNF application caused Phldb2 recruitment toward postsynaptic membrane in dendritic spines, whereas PI3K inhibition resulted in its reduced accumulation. Phldb2 bound to postsynaptic scafolding molecule PSD-95 and was crucial for localization and turnover of PSD-95 in the spine. -
The Molecular Design of Visual Transduction
The Molecular Design of Visual Transduction Tomoki Isayama1, Anita L. Zimmerman2, Clint L. Makino1 1Department of Ophthalmology, Massachusetts Eye and Ear Infirmary and Harvard Medical School, Boston, MA 02114; 2Department of Molecular Pharmacology, Physiology, and Biotechnology, Brown University, Providence, RI 02912 Our daily lives are so resplendent with activities that include or require vision, that it is easy to overlook the complexity of the underlying processes involved. Here we describe the first step in vision…detection of light by our photoreceptors. This input stage sets limits on what we can and cannot see. The goal of this resource page is to impart a better understanding of the molecular design behind visual transduction. Structure and Function of Rods and Cones The photoreceptors are located in the deepest layer of the retina (Fig.1), farthest from the incoming light. There are two kinds, rods and cones, so named for their overall shapes. Rods operate in very low light, such as at night. Cones operate under brighter conditions and provide the basic units for color vision. The recently discovered intrinsically photoreceptive ganglion cells will be excluded from this review because while they respond to light, they have not been shown to contribute to image-forming vision. Rods and cones are specialized unipolar neurons. All vertebrate visual receptors follow a simple blueprint. They can be divided into two portions, termed inner and outer segments, according to their radial position within the retina (Fig.1B). The inner segment consists of the cell body and contains the cellular organelles found in other neurons, including a synaptic terminal. -
TBX3 Acts As Tissue-Specific Component of the Wnt/Β
bioRxiv preprint doi: https://doi.org/10.1101/2020.04.22.053561; this version posted April 22, 2020. The copyright holder for this preprint (which was not certified by peer review) is the author/funder, who has granted bioRxiv a license to display the preprint in perpetuity. It is made available under aCC-BY-NC 4.0 International license. TBX3 acts as tissue-specific component of the Wnt/b-catenin enhanceosome Dario Zimmerli1,6#, Costanza Borrelli2#, Amaia Jauregi-Miguel3,4#, Simon Söderholm3,4, Salome Brütsch1, Nikolaos Doumpas1, Jan Reichmuth1, Fabienne Murphy-Seiler5, Michel Aguet5, Konrad Basler1*, Andreas E. Moor2*, Claudio Cantù3,4* 1 Department of Molecular Life Sciences, University of Zurich, Zürich, Switzerland, CH-8057 2 Institute of Molecular Cancer Research, University of Zurich, Zürich, Switzerland, CH-8057 3 Wallenberg Centre for Molecular Medicine, Linköping University 4 Department of Biomedical and Clinical Sciences, Faculty of Health Science, SE-581 83 Linköping, Sweden 5Swiss Institute for Experimental Cancer Research (ISREC), Ecole Polytechnique Fédérale de Lausanne (EPFL), School of Life Sciences, CH-1015 Lausanne, Switzerland 6 Current address: Division of Molecular Pathology, The Netherlands Cancer Institute, Amsterdam, The Netherlands # These authors contributed equally to this work * For correspondence: [email protected] [email protected] [email protected] 1 bioRxiv preprint doi: https://doi.org/10.1101/2020.04.22.053561; this version posted April 22, 2020. The copyright holder for this preprint (which was not certified by peer review) is the author/funder, who has granted bioRxiv a license to display the preprint in perpetuity. It is made available under aCC-BY-NC 4.0 International license. -
Biological Basis for Pale, Soft and Exudative Pork
MEAT QUALITY Biological Basis for Pale, Soft and Exudative Pork Matthew E. Doumit*, Chuck P. Allison, Emily E. Helman, Nicholas L. Berry and Matthew J. Ritter Introduction Miller and O’Callaghan, 2002; Wurtman, 2002). Miller and O’Callaghan (2002) defined stress as any disruption of ho- Pale, soft and exudative (PSE) pork was recognized a half meostasis. Following disruption of homeostasis, the hypo- century ago by Ludvigsen (1953). The undesirable appear- thalamic-pituitary-adrenal (HPA) axis and the sympathetic ance and texture, limited functionality, and inferior process- nervous system (SNS) are activated in an attempt to preserve ing yield of PSE pork continue to make it a critical quality homeostasis (Miller and O’Callaghan, 2002). Initiation of and economic concern (Cannon et al., 1996; Cassens, the stress response via the HPA axis involves synthesis and 2000). Rapid postmortem muscle acidification combined release of corticotropin releasing factor (CRF) from the with high muscle temperature, as well as low ultimate meat paraventricular nucleus of the hypothalamus. CRF travels pH, have long been implicated as factors that induce PSE down the axons of these neurons to the external layer of the pork characteristics (Briskey, et al., 1966; Sellier and Monin, median eminence. Release of CRF into the portal blood 1994). Numerous reports on the development of PSE pork controls processing of adrenocorticotropic hormone (ACTH) have focused on major gene effects, including the halo- in anterior pituitary corticotrophs, as well as secretion of thane (stress) gene (Fujii et al., 1991; reviewed by Louis et several other pituitary hormones. Figure 1 illustrates the al., 1993) and the Napole gene (RN-; reviewed by Sellier multi-hormonal control of ACTH release. -
Update on PSE in Poultry Meat
Update on PSE in Poultry Meat Christine Z. Alvarado, Ph.D. Department of Animal and Food Sciences Texas Tech University Meat Quality Attributes influenced by postmortem muscle metabolism: ¾ Color ¾ Water Holding Capacity ¾ Texture Ferket and Foegeding, 1994; Pearson, 1994 Meat Quality Pale, Soft, Exudative ¾ accelerated postmortem glycolysis ¾ protein denaturation Hedrick et al., 1989; Lawrie, 1998 Meat Quality Combination of events: ¾ Rapid postmortem decline in muscle pH ¾ High carcass temperatures (early postmortem) Bendall and Wismer-Pederson, 1962; Penny, 1969 Meat Quality Pale, Soft, Exudative Meat ¾ Pale color ¾ Soft texture ¾ Low water holding capacity = reduced yields and poor quality Protein Denaturation Myofibrillar proteins Water holding capacity / gel strength Sarcomplasmic proteins Color Bendall and Wismer-Pederson, 1962; Penny, 1969 Protein Denaturation Protein denaturation can cause low strength (poor) gels to form resulting in softer (mushy) texture. Example: Pale, SOFT, Exudative meat Protein Denaturation Poor slice ability PSE meat Deli Loaves and Rolls Made with PSE Turkey Meat Excessive Purge Pale color Low WHC Problems with PSE Broiler Meat ¾ Lost yield (sometimes hidden) ¾ Problems in further processing equipment (e.g. automatic breast deboner) ¾ Variation in color Economic Implications 4The use of PSE meat in cooked products can cost a processing plant $2-4 million/year in lost meat yield alone. 4Estimate does not factor in: hpackaging costs hrework labor hmultiplier effect PSE Incidence in Poultry Ranges from 5-40% -
Dominant Role of Tyrosine 394 Phosphorylation in Kinase Activity
MOLECULAR AND CELLULAR BIOLOGY, Sept. 1996, p. 4996–5003 Vol. 16, No. 9 0270-7306/96/$04.0010 Copyright q 1996, American Society for Microbiology Mutational Analysis of Lck in CD45-Negative T Cells: Dominant Role of Tyrosine 394 Phosphorylation in Kinase Activity 1 2 2 1 UGO D’ORO, KAZUYASU SAKAGUCHI, ETTORE APPELLA, AND JONATHAN D. ASHWELL * Laboratory of Immune Cell Biology1 and Laboratory of Cell Biology,2 National Cancer Institute, Bethesda, Maryland 20892 Received 29 November 1995/Returned for modification 30 January 1996/Accepted 18 June 1996 The CD45 tyrosine phosphatase has been reported to activate the src family tyrosine kinases Lck and Fyn by dephosphorylating regulatory COOH-terminal tyrosine residues 505 and 528, respectively. However, recent studies with CD452 T-cell lines have found that despite the fact that Lck and Fyn were constitutively hyperphosphorylated, the tyrosine kinase activity of both enzymes was actually increased. In the present study, phosphoamino acid analysis revealed that the increased phosphorylation of Lck in CD452 YAC-1 T cells was restricted to tyrosine residues. To understand the relationship between tyrosine phosphorylation and Lck kinase activity, CD452 YAC-1 cells were transfected with forms of Lck in which tyrosines whose phosphory- lation is thought to regulate enzyme activity (Tyr-192, Tyr-394, Tyr-505, or both Tyr-394 and Tyr-505) were replaced with phenylalanine. While the Y-to-F mutation at position 192 (192-Y3F) had little effect, the 505-Y3F mutation increased enzymatic activity. In contrast, the 394-Y3F mutation decreased the kinase activity to very low levels, an effect that the double mutation, 394-Y3F and 505Y3F, could not reverse.