Trisomy 14 Mosaicism FTNW
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The Mutational Landscape of Myeloid Leukaemia in Down Syndrome
cancers Review The Mutational Landscape of Myeloid Leukaemia in Down Syndrome Carini Picardi Morais de Castro 1, Maria Cadefau 1,2 and Sergi Cuartero 1,2,* 1 Josep Carreras Leukaemia Research Institute (IJC), Campus Can Ruti, 08916 Badalona, Spain; [email protected] (C.P.M.d.C); [email protected] (M.C.) 2 Germans Trias i Pujol Research Institute (IGTP), Campus Can Ruti, 08916 Badalona, Spain * Correspondence: [email protected] Simple Summary: Leukaemia occurs when specific mutations promote aberrant transcriptional and proliferation programs, which drive uncontrolled cell division and inhibit the cell’s capacity to differentiate. In this review, we summarize the most frequent genetic lesions found in myeloid leukaemia of Down syndrome, a rare paediatric leukaemia specific to individuals with trisomy 21. The evolution of this disease follows a well-defined sequence of events and represents a unique model to understand how the ordered acquisition of mutations drives malignancy. Abstract: Children with Down syndrome (DS) are particularly prone to haematopoietic disorders. Paediatric myeloid malignancies in DS occur at an unusually high frequency and generally follow a well-defined stepwise clinical evolution. First, the acquisition of mutations in the GATA1 transcription factor gives rise to a transient myeloproliferative disorder (TMD) in DS newborns. While this condition spontaneously resolves in most cases, some clones can acquire additional mutations, which trigger myeloid leukaemia of Down syndrome (ML-DS). These secondary mutations are predominantly found in chromatin and epigenetic regulators—such as cohesin, CTCF or EZH2—and Citation: de Castro, C.P.M.; Cadefau, in signalling mediators of the JAK/STAT and RAS pathways. -
Adult Acute Myeloid Leukemia with Trisomy 11 As the Sole Abnormality
Letters to the Editor 2254 Adult acute myeloid leukemia with trisomy 11 as the sole abnormality is characterized by the presence of five distinct gene mutations: MLL-PTD, DNMT3A, U2AF1, FLT3-ITD and IDH2 Leukemia (2016) 30, 2254–2258; doi:10.1038/leu.2016.196 sequencing approach at the DNA level were also analyzed at the RNA level by visual inspection of the BAM files. The clinical characteristics and outcomes of 23 patients with Trisomy of chromosome 11 (+11) is the second most common sole +11 are summarized in Table 1. The patients were isolated trisomy in acute myeloid leukemia (AML) patients.1 The presence of +11 is associated with intermediate2,3 or poor 4–6 Table 1. Pretreatment clinical and molecular characteristics and patient outcomes. Whereas the clinical characteristics of solitary outcome of patients with acute myeloid leukemia (AML) and sole +11 +11 have been well established,4–6 relatively little is known about the mutational landscape of sole +11 AML in the age of next- Characteristica Sole +11 AML (n = 23) generation sequencing techniques that allow examination of multiple genes relevant to AML pathogenesis.6 So far, the most Age, years Median 71 common molecular feature in AML with isolated +11 is the – presence of a partial tandem duplication of the MLL (KMT2A) gene Range 25 84 (MLL-PTD), which is detectable in up to 90% of patients.7 Age group, n (%) Furthermore, a frequent co-occurrence of the FLT3 internal o60 years 18 (78) tandem duplication (FLT3-ITD) with MLL-PTD has been reported.8 ⩾ 60 years 5 (22) The aim of our study was to better characterize the mutational Female sex, n (%) 5 (22) landscape of adult AML patients with sole +11. -
Post-Zygotic Mosaic Mutation in Normal Tissue from Breast Cancer Patient
Extended Abstract Research in Genes and Proteins Vol. 1, Iss. 1 2019 Post-zygotic Mosaic Mutation in Normal Tissue from Breast Cancer Patient Ryong Nam Kim Seoul National University Bio-MAX/NBIO, Seoul, Korea, Email: [email protected] ABSTRACT Even though numerous previous investigations had shed errors during replication, defects in chromosome fresh light on somatic driver mutations in cancer tissues, segregation during mitosis, and direct chemical attacks by the mutation-driven malignant transformation mechanism reactive oxygen species. the method of cellular genetic from normal to cancerous tissues remains still mysterious. diversification begins during embryonic development and during this study, we performed whole exome analysis of continues throughout life, resulting in the phenomenon of paired normal and cancer samples from 12 carcinoma somatic mosaicism. New information about the genetic patients so as to elucidate the post-zygotic mosaic diversity of cells composing the body makes us reconsider mutation which may predispose to breast carcinogenesis. the prevailing concepts of cancer etiology and We found a post-zygotic mosaic mutation PIK3CA pathogenesis. p.F1002C with 2% variant allele fraction (VAF) in normal tissue, whose respective VAF during a matched carcinoma Here, I suggest that a progressively deteriorating tissue, had increased by 20.6%. Such an expansion of the microenvironment (“soil”) generates the cancerous “seed” variant allele fraction within the matched cancer tissue and favors its development. Cancer Res; 78(6); 1375–8. ©2018 AACR. Just like nothing ha s contributed to the may implicate the mosaic mutation in association with the causation underlying the breast carcinogenesis. flourishing of physics quite war, nothing has stimulated the event of biology quite cancer. -
Genetic Mosaicism: What Gregor Mendel Didn't Know
Genetic mosaicism: what Gregor Mendel didn't know. R Hirschhorn J Clin Invest. 1995;95(2):443-444. https://doi.org/10.1172/JCI117682. Research Article Find the latest version: https://jci.me/117682/pdf Genetic Mosaicism: What Gregor Mendel Didn't Know Editorial The word "mosaic" was originally used as an adjective to depending on the developmental stage at which the mutation describe any form of work or art produced by the joining to- occurs, may or may not be associated with somatic mosaicism gether of many tiny pieces that differ in size and color (1). In and may include all or only some of the germ cells. (A totally that sense, virtually all multicellular organisms are mosaics of different mechanism for somatic mosaicism has been recently cells of different form and function. Normal developmentally described, reversion of a transmitted mutation to normal [4]. determined mosaicism can involve permanent alterations of We have additionally identified such an event [our unpublished DNA in somatic cells such as the specialized cells of the im- observations]. ) mune system. In such specialized somatic cells, different re- Somatic and germ line mosaicism were initially inferred on arrangements of germ line DNA for immunoglobulin and T cell clinical grounds for a variety of diseases, including autosomal receptor genes and the different mutations accompanying these dominant and X-linked disorders, as presciently reviewed by rearrangements alter DNA and function. However, these alter- Hall (3). Somatic mosaicism for inherited disease was initially ations in individual cells cannot be transmitted to offspring definitively established for chromosomal disorders, such as since they occur only in differentiated somatic cells. -
Phenotype Manifestations of Polysomy X at Males
PHENOTYPE MANIFESTATIONS OF POLYSOMY X AT MALES Amra Ćatović* &Centre for Human Genetics, Faculty of Medicine, University of Sarajevo, Čekaluša , Sarajevo, Bosnia and Herzegovina * Corresponding author Abstract Klinefelter Syndrome is the most frequent form of male hypogonadism. It is an endocrine disorder based on sex chromosome aneuploidy. Infertility and gynaecomastia are the two most common symptoms that lead to diagnosis. Diagnosis of Klinefelter syndrome is made by karyotyping. Over years period (-) patients have been sent to “Center for Human Genetics” of Faculty of Medicine in Sarajevo from diff erent medical centres within Federation of Bosnia and Herzegovina with diagnosis suspecta Klinefelter syndrome, azoo- spermia, sterilitas primaria and hypogonadism for cytogenetic evaluation. Normal karyotype was found in (,) subjects, and karyotype was changed in (,) subjects. Polysomy X was found in (,) examinees. Polysomy X was expressed at the age of sexual maturity in the majority of the cases. Our results suggest that indication for chromosomal evaluation needs to be established at a very young age. KEY WORDS: polysomy X, hypogonadism, infertility Introduction Structural changes in gonosomes (X and Y) cause different distribution of genes, which may be exhibited in various phenotypes. Numerical aberrations of gonosomes have specific pattern of phenotype characteristics, which can be classified as clini- cal syndrome. Incidence of gonosome aberrations in males is / male newborn (). Klinefelter syndrome is the most common chromosomal disorder associated with male hypogonadism. According to different authors incidence is / male newborns (), /- (), and even / (). Very high incidence indicates that the zygotes with Klinefelter syndrome are more vital than those with other chromosomal aberrations. BOSNIAN JOURNAL OF BASIC MEDICAL SCIENCES 2008; 8 (3): 287-290 AMRA ĆATOVIĆ: PHENOTYPE MANIFESTATIONS OF POLYSOMY X AT MALES In , Klinefelter et al. -
Construction of Stable Mouse Arti Cial Chromosome from Native Mouse
Construction of Stable Mouse Articial Chromosome from Native Mouse Chromosome 10 for Generation of Transchromosomic Mice Satoshi Abe Tottori University Kazuhisa Honma Trans Chromosomics, Inc Akane Okada Tottori University Kanako Kazuki Tottori University Hiroshi Tanaka Trans Chromosomics, Inc Takeshi Endo Trans Chromosomics, Inc Kayoko Morimoto Trans Chromosomics, Inc Takashi Moriwaki Tottori University Shusei Hamamichi Tottori University Yuji Nakayama Tottori University Teruhiko Suzuki Tokyo Metropolitan Institute of Medical Science Shoko Takehara Trans Chromosomics, Inc Mitsuo Oshimura Tottori University Yasuhiro Kazuki ( [email protected] ) Tottori University Research Article Page 1/21 Keywords: mouse articial chromosome (MAC), microcell-mediated chromosome transfer (MMCT), chromosome engineering, transchromosomic (Tc) mouse, humanized model mouse Posted Date: July 9th, 2021 DOI: https://doi.org/10.21203/rs.3.rs-675300/v1 License: This work is licensed under a Creative Commons Attribution 4.0 International License. Read Full License Page 2/21 Abstract Mammalian articial chromosomes derived from native chromosomes have been applied to biomedical research and development by generating cell sources and transchromosomic (Tc) animals. Human articial chromosome (HAC) is a precedent chromosomal vector which achieved generation of valuable humanized animal models for fully human antibody production and human pharmacokinetics. While humanized Tc animals created by HAC vector have attained signicant contributions, there was a potential issue to be addressed regarding stability in mouse tissues, especially highly proliferating hematopoietic cells. Mouse articial chromosome (MAC) vectors derived from native mouse chromosome 11 demonstrated improved stability, and they were utilized for humanized Tc mouse production as a standard vector. In mouse, however, stability of MAC vector derived from native mouse chromosome other than mouse chromosome 11 remains to be evaluated. -
IL21R Expressing CD14+CD16+ Monocytes Expand in Multiple
Plasma Cell Disorders SUPPLEMENTARY APPENDIX IL21R expressing CD14 +CD16 + monocytes expand in multiple myeloma patients leading to increased osteoclasts Marina Bolzoni, 1 Domenica Ronchetti, 2,3 Paola Storti, 1,4 Gaetano Donofrio, 5 Valentina Marchica, 1,4 Federica Costa, 1 Luca Agnelli, 2,3 Denise Toscani, 1 Rosanna Vescovini, 1 Katia Todoerti, 6 Sabrina Bonomini, 7 Gabriella Sammarelli, 1,7 Andrea Vecchi, 8 Daniela Guasco, 1 Fabrizio Accardi, 1,7 Benedetta Dalla Palma, 1,7 Barbara Gamberi, 9 Carlo Ferrari, 8 Antonino Neri, 2,3 Franco Aversa 1,4,7 and Nicola Giuliani 1,4,7 1Myeloma Unit, Dept. of Medicine and Surgery, University of Parma; 2Dept. of Oncology and Hemato-Oncology, University of Milan; 3Hematology Unit, “Fondazione IRCCS Ca’ Granda”, Ospedale Maggiore Policlinico, Milan; 4CoreLab, University Hospital of Parma; 5Dept. of Medical-Veterinary Science, University of Parma; 6Laboratory of Pre-clinical and Translational Research, IRCCS-CROB, Referral Cancer Center of Basilicata, Rionero in Vulture; 7Hematology and BMT Center, University Hospital of Parma; 8Infectious Disease Unit, University Hospital of Parma and 9“Dip. Oncologico e Tecnologie Avanzate”, IRCCS Arcispedale Santa Maria Nuova, Reggio Emilia, Italy ©2017 Ferrata Storti Foundation. This is an open-access paper. doi:10.3324/haematol. 2016.153841 Received: August 5, 2016. Accepted: December 23, 2016. Pre-published: January 5, 2017. Correspondence: [email protected] SUPPLEMENTAL METHODS Immunophenotype of BM CD14+ in patients with monoclonal gammopathies. Briefly, 100 μl of total BM aspirate was incubated in the dark with anti-human HLA-DR-PE (clone L243; BD), anti-human CD14-PerCP-Cy 5.5, anti-human CD16-PE-Cy7 (clone B73.1; BD) and anti-human CD45-APC-H 7 (clone 2D1; BD) for 20 min. -
ABC of Clinical Genetics CHROMOSOMAL DISORDERS II
ABC of Clinical Genetics CHROMOSOMAL DISORDERS II BMJ: first published as 10.1136/bmj.298.6676.813 on 25 March 1989. Downloaded from Helen M Kingston Developmental delay in Chromosomal abnormalities are generally associated with multiple child with deletion of congenital malformations and mental retardation. Children with more than chromosome 13. one physical abnormality, particularly ifretarded, should therefore undergo chromosomal analysis as part of their investigation. Chromosomal disorders are incurable but can be reliably detected by prenatal diagnostic techniques. Amniocentesis or chorionic villus sampling should be offered to women whose pregnancies are at increased risk-namely, women in their mid to late thirties, couples with an affected child, and couples in whom one partner carries a balanced translocation. Unfortunately, when there is no history of previous abnormality the risk in many affected pregnancies cannot be predicted beforehand. Autosomal abnormalities Parents Non-dysjunction Trisomy 21 (Down's syndrome) Down's syndrome is the commonest autosomal Gametes trisomy, the incidence in liveborn infants being one in 650, although more than half of conceptions with trisomy 21 do not survive to term. Affected children have a characteristic Offspring facial appearance, are mentally retarded, and Trisomy 21 often die young. They may have associated Non-dysjunction of chromosome 21 leading to Down's syndrome. congenital heart disease and are at increased risk recurrent for infections, atlantoaxial instability, http://www.bmj.com/ -- All chromosomal abnormalities at and acute leukaemia. They are often happy and 100 - ainniocentesis ---- Downl's syndrome at amniocentesis Risk for trisomy 21 in liveborn infants affectionate children who are easy to manage. -
Practice Guidelines for Molecular Diagnosis of Fragile X Syndrome
Practice Guidelines for Molecular Diagnosis of Fragile X Syndrome Prepared and edited by James Macpherson 1 and Abid Sharif 2 following a CMGS Workshop held on 10 th July 2012. 1. Wessex Regional Genetics Laboratory, Salisbury NHS Foundation Trust, Salisbury, Wiltshire, SP2 8BJ, U.K. 2. East Midlands Regional Molecular Genetics Service, Nottingham University Hospitals NHS Trust, City Hospital Campus, Nottingham, NG5 1PB, U.K. Guidelines updated by the Association for Clinical Genetic Science (formally Clinical Molecular Genetics Society and Association of Clinical Cytogenetics) approved November 2014. 1. NOMENCLATURE and GENE IDs OMIM Condition Gene name Gene map locus 309550 Fragile X Syndrome FMR1 Xq27.3 309548 FRAXE FMR2 Xq28 2. DESCRIPTION OF DISEASE 2.1 Fragile X Syndrome Fragile X Syndrome is thought to be the commonest single-gene cause of learning disability features in humans with an estimated prevalence of 1 in 4000- 1 in 6000 males, where it causes moderate to severe intellectual and social impairment together with syndromic features including large ears and head, long face and macroorchidism 1. A fragile site (FRAXA) is expressible at the gene locus at Xq27.3, typically in 2-40 % of blood cells in affected males. The pathogenic mutation in most cases is a large expansion (‘full mutation’) in a CGG repeat tract in the first untranslated exon of the gene FMR1, which normally encodes the RNA-binding protein FMRP. Full mutations (from approximately 200 repeats upwards) result in hypermethylation of the DNA in and around the CGG tract, curtailed gene expression and no FMRP being produced 2-4. Smaller expansions of the CGG repeat, or ‘premutations’ are not hypermethylated and hence do not cause Fragile X syndrome, but may show expansion into full mutations over one or more generations. -
Dr. Fern Tsien, Dept. of Genetics, LSUHSC, NO, LA Down Syndrome
COMMON TYPES OF CHROMOSOME ABNORMALITIES Dr. Fern Tsien, Dept. of Genetics, LSUHSC, NO, LA A. Trisomy: instead of having the normal two copies of each chromosome, an individual has three of a particular chromosome. Which chromosome is trisomic determines the type and severity of the disorder. Down syndrome or Trisomy 21, is the most common trisomy, occurring in 1 per 800 births (about 3,400) a year in the United States. It is one of the most common genetic birth defects. According to the National Down Syndrome Society, there are more than 400,000 individuals with Down syndrome in the United States. Patients with Down syndrome have three copies of their 21 chromosomes instead of the normal two. The major clinical features of Down syndrome patients include low muscle tone, small stature, an upward slant to the eyes, a single deep crease across the center of the palm, mental retardation, and physical abnormalities, including heart and intestinal defects, and increased risk of leukemia. Every person with Down syndrome is a unique individual and may possess these characteristics to different degrees. Down syndrome patients Karyotype of a male patient with trisomy 21 What are the causes of Down syndrome? • 95% of all Down syndrome patients have a trisomy due to nondisjunction before fertilization • 1-2% have a mosaic karyotype due to nondisjunction after fertilization • 3-4% are due to a translocation 1. Nondisjunction refers to the failure of chromosomes to separate during cell division in the formation of the egg, sperm, or the fetus, causing an abnormal number of chromosomes. As a result, the baby may have an extra chromosome (trisomy). -
14Q13 Deletions FTNW
14q13 deletions rarechromo.org 14q13 deletions A chromosome 14 deletion means that part of one of the body’s chromosomes (chromosome 14) has been lost or deleted. If the deleted material contains important genes, learning disability, developmental delay and health problems may occur. How serious these problems are depends on how much of the chromosome has been deleted, which genes have been lost and where precisely the deletion is. The features associated with 14q13 deletions vary from person to person, but are likely to include a degree of developmental delay, an unusually small or large head, a raised risk of medical problems and unusual facial features. Genes and chromosomes Our bodies are made up of billions of cells. Most of these cells contain a complete set of thousands of genes that act as instructions, controlling our growth, development and how our bodies work. Inside human cells there is a nucleus where the genes are carried on microscopically small, thread-like structures called chromosomes which are made up p arm p arm of DNA. p arm p arm Chromosomes come in pairs of different sizes and are numbered from largest to smallest, roughly according to their size, from number 1 to number 22. In addition to these so-called autosomal chromosomes there are the sex chromosomes, X and Y. So a human cell has 46 chromosomes: 23 inherited from the mother and 23 inherited from the father, making two sets of 23 chromosomes. A girl has two X chromosomes (XX) while a boy will have one X and one Y chromosome (XY). -
An Unusual Case of Mosaic Down's Syndrome Involving Two Different
J Med Genet: first published as 10.1136/jmg.26.3.198 on 1 March 1989. Downloaded from 198 Case reports An unusual case of mosaic Down's syndrome involving two different Robertsonian translocations M J CLARKE*, D A G THOMSON*, M J GRIFFITHS*, J G BISSENDENt, A AUKETTt, AND J L WATT* From *the Regional Cytogenetics Unit, Birmingham Maternity Hospital, Edgbaston, Birmingham B15 2TG; and tDudley Road Hospital, Dudley Road, Birmingham B18 7QH. SUMMARY A baby girl with some of the Case report stigmata of Down's syndrome was found to be a mosaic with three different cell lines: The patient was born at term in February 1987 45,XX,-13,-21,+t(13q21q)/(46,XX/46,XX, weighing 2800 g after a normal pregnancy and The rearrange- delivery. The mother was 27 years old and the father -21, +t(2lq21q). chromosome 29. This was their first child and neither parent has ments detected in this patient appear to have any family history of Down's syndrome. arisen de novo. In the normal cell line the Some features of Down's syndrome were noted in terminal end of the p arm of one chromosome the infant soon after birth and she was referred for 21 is thought to have been damaged. It seems cytogenetic analysis. Physical examination showed a probable that this is related to the other typical mongoloid slant to the eyes, low set ears, a chromosomal anomalies found. single palmar crease, broad hands with stubby fingers, a large space between her big toe and the rest of her toes, and a slightly protuberant tongue.