Reproduction and Dispersal of Biological Soil Crust Organisms
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Investigating the Initial Steps in the Biosynthesis of Cyanobacterial Sunscreen Scytonemin
Investigating the Initial Steps in the Biosynthesis of Cyanobacterial Sunscreen Scytonemin The Harvard community has made this article openly available. Please share how this access benefits you. Your story matters Citation Balskus, Emily P., and Christopher T. Walsh. 2008. “Investigating the Initial Steps in the Biosynthesis of Cyanobacterial Sunscreen Scytonemin.” Journal of the American Chemical Society 130 (46) (November 19): 15260–15261. Published Version doi:10.1021/ja807192u Citable link http://nrs.harvard.edu/urn-3:HUL.InstRepos:12153245 Terms of Use This article was downloaded from Harvard University’s DASH repository, and is made available under the terms and conditions applicable to Open Access Policy Articles, as set forth at http:// nrs.harvard.edu/urn-3:HUL.InstRepos:dash.current.terms-of- use#OAP NIH Public Access Author Manuscript J Am Chem Soc. Author manuscript; available in PMC 2009 November 19. NIH-PA Author ManuscriptPublished NIH-PA Author Manuscript in final edited NIH-PA Author Manuscript form as: J Am Chem Soc. 2008 November 19; 130(46): 15260±15261. doi:10.1021/ja807192u. Investigating the Initial Steps in the Biosynthesis of Cyanobacterial Sunscreen Scytonemin Emily P. Balskus and Christopher T. Walsh Contribution from the Department of Biological Chemistry and Molecular Pharmacology, Harvard Medical School, Boston, Massachusetts 02115 Photosynthetic cyanobacteria have evolved a variety of strategies for coping with exposure to damaging solar UV radiation,1 including DNA repair processes,2 UV avoidance behavior,3 and the synthesis of radiation-absorbing pigments.4 Scytonemin (1) is the most widespread and extensively characterized cyanobacterial sunscreen.5 This lipid soluble alkaloid accumulates in the extracellular sheaths of cyanobacteria upon exposure to UV-A light, where 6 it absorbs further incident radiation λmax = 384 nm). -
Bacteria Increase Arid-Land Soil Surface Temperature Through the Production of Sunscreens
Lawrence Berkeley National Laboratory Recent Work Title Bacteria increase arid-land soil surface temperature through the production of sunscreens. Permalink https://escholarship.org/uc/item/0gm2g8mx Journal Nature communications, 7(1) ISSN 2041-1723 Authors Couradeau, Estelle Karaoz, Ulas Lim, Hsiao Chien et al. Publication Date 2016-01-20 DOI 10.1038/ncomms10373 Peer reviewed eScholarship.org Powered by the California Digital Library University of California ARTICLE Received 9 Jun 2015 | Accepted 3 Dec 2015 | Published 20 Jan 2016 DOI: 10.1038/ncomms10373 OPEN Bacteria increase arid-land soil surface temperature through the production of sunscreens Estelle Couradeau1, Ulas Karaoz2, Hsiao Chien Lim2, Ulisses Nunes da Rocha2,w, Trent Northen3, Eoin Brodie2,4 & Ferran Garcia-Pichel1,3 Soil surface temperature, an important driver of terrestrial biogeochemical processes, depends strongly on soil albedo, which can be significantly modified by factors such as plant cover. In sparsely vegetated lands, the soil surface can be colonized by photosynthetic microbes that build biocrust communities. Here we use concurrent physical, biochemical and microbiological analyses to show that mature biocrusts can increase surface soil temperature by as much as 10 °C through the accumulation of large quantities of a secondary metabolite, the microbial sunscreen scytonemin, produced by a group of late-successional cyanobacteria. Scytonemin accumulation decreases soil albedo significantly. Such localized warming has apparent and immediate consequences for the soil microbiome, inducing the replacement of thermosensitive bacterial species with more thermotolerant forms. These results reveal that not only vegetation but also microorganisms are a factor in modifying terrestrial albedo, potentially impacting biosphere feedbacks on past and future climate, and call for a direct assessment of such effects at larger scales. -
Long-Term Changes in Biological Soil Crust Cover and Composition Eva Dettweiler-Robinson1*, Jeanne M Ponzetti2 and Jonathan D Bakker3
Dettweiler-Robinson et al. Ecological Processes 2013, 2:5 http://www.ecologicalprocesses.com/content/2/1/5 RESEARCH Open Access Long-term changes in biological soil crust cover and composition Eva Dettweiler-Robinson1*, Jeanne M Ponzetti2 and Jonathan D Bakker3 Abstract Introduction: Communities change over time due to disturbances, variations in climate, and species invasions. Biological soil crust communities are important because they contribute to erosion control and nutrient cycling. Crust types may respond differently to changes in environmental conditions: single-celled organisms and bryophytes quickly recover after a disturbance, while lichens are slow growing and dominate favorable sites. Community change in crusts has seldom been assessed using repeated measures. For this study, we hypothesized that changes in crust composition were related to disturbance, topographic position, and invasive vegetation. Methods: We monitored permanent plots in the Columbia Basin in 1999 and 2010 and compared changes in crust composition, cover, richness, and turnover with predictor variables of herbivore exclosure, elevation, heat load index, time since fire, presence of an invasive grass, and change in cover of the invasive grass. Results: Bryophytes were cosmopolitan with high cover. Dominant lichens did not change dramatically. Indicator taxa differed by monitoring year. Bryophyte and total crust cover declined, and there was lower turnover outside of herbivore exclosures. Lichen cover did not change significantly. Plots that burned recently had high turnover. Increase in taxon richness was correlated with presence of an invasive grass in 1999. Change in cover of the invasive grass was positively related to proportional loss and negatively related to gain. Conclusions: Composition and turnover metrics differed significantly over 11 years, though cover was more stable between years. -
Biology and Systematics of Heterokont and Haptophyte Algae1
American Journal of Botany 91(10): 1508±1522. 2004. BIOLOGY AND SYSTEMATICS OF HETEROKONT AND HAPTOPHYTE ALGAE1 ROBERT A. ANDERSEN Bigelow Laboratory for Ocean Sciences, P.O. Box 475, West Boothbay Harbor, Maine 04575 USA In this paper, I review what is currently known of phylogenetic relationships of heterokont and haptophyte algae. Heterokont algae are a monophyletic group that is classi®ed into 17 classes and represents a diverse group of marine, freshwater, and terrestrial algae. Classes are distinguished by morphology, chloroplast pigments, ultrastructural features, and gene sequence data. Electron microscopy and molecular biology have contributed signi®cantly to our understanding of their evolutionary relationships, but even today class relationships are poorly understood. Haptophyte algae are a second monophyletic group that consists of two classes of predominately marine phytoplankton. The closest relatives of the haptophytes are currently unknown, but recent evidence indicates they may be part of a large assemblage (chromalveolates) that includes heterokont algae and other stramenopiles, alveolates, and cryptophytes. Heter- okont and haptophyte algae are important primary producers in aquatic habitats, and they are probably the primary carbon source for petroleum products (crude oil, natural gas). Key words: chromalveolate; chromist; chromophyte; ¯agella; phylogeny; stramenopile; tree of life. Heterokont algae are a monophyletic group that includes all (Phaeophyceae) by Linnaeus (1753), and shortly thereafter, photosynthetic organisms with tripartite tubular hairs on the microscopic chrysophytes (currently 5 Oikomonas, Anthophy- mature ¯agellum (discussed later; also see Wetherbee et al., sa) were described by MuÈller (1773, 1786). The history of 1988, for de®nitions of mature and immature ¯agella), as well heterokont algae was recently discussed in detail (Andersen, as some nonphotosynthetic relatives and some that have sec- 2004), and four distinct periods were identi®ed. -
Thi Thu Tram NGUYEN
ANNÉE 2014 THÈSE / UNIVERSITÉ DE RENNES 1 sous le sceau de l’Université Européenne de Bretagne pour le grade de DOCTEUR DE L’UNIVERSITÉ DE RENNES 1 Mention : Chimie Ecole doctorale Sciences De La Matière Thi Thu Tram NGUYEN Préparée dans l’unité de recherche UMR CNRS 6226 Equipe PNSCM (Produits Naturels Synthèses Chimie Médicinale) (Faculté de Pharmacie, Université de Rennes 1) Screening of Thèse soutenue à Rennes le 19 décembre 2014 mycosporine-like devant le jury composé de : compounds in the Marie-Dominique GALIBERT Professeur à l’Université de Rennes 1 / Examinateur Dermatocarpon genus. Holger THÜS Conservateur au Natural History Museum Londres / Phytochemical study Rapporteur Erwan AR GALL of the lichen Maître de conférences à l’Université de Bretagne Occidentale / Rapporteur Dermatocarpon luridum Kim Phi Phung NGUYEN Professeur à l’Université des sciences naturelles (With.) J.R. Laundon. d’Hô-Chi-Minh-Ville Vietnam / Examinateur Marylène CHOLLET-KRUGLER Maître de conférences à l’Université de Rennes1 / Co-directeur de thèse Joël BOUSTIE Professeur à l’Université de Rennes 1 / Directeur de thèse Remerciements En premier lieu, je tiens à remercier Monsieur le Dr Holger Thüs et Monsieur le Dr Erwan Ar Gall d’avoir accepté d’être les rapporteurs de mon manuscrit, ainsi que Madame la Professeure Marie-Dominique Galibert d’avoir accepté de participer à ce jury de thèse. J’exprime toute ma gratitude au Dr Marylène Chollet-Krugler pour avoir guidé mes pas dès les premiers jours et tout au long de ces trois années. Je la remercie particulièrement pour sa disponibilité et sa grande gentillesse, son écoute et sa patience. -
Biological Soil Crust Community Types Differ in Key Ecological Functions
UC Riverside UC Riverside Previously Published Works Title Biological soil crust community types differ in key ecological functions Permalink https://escholarship.org/uc/item/2cs0f55w Authors Pietrasiak, Nicole David Lam Jeffrey R. Johansen et al. Publication Date 2013-10-01 DOI 10.1016/j.soilbio.2013.05.011 Peer reviewed eScholarship.org Powered by the California Digital Library University of California Soil Biology & Biochemistry 65 (2013) 168e171 Contents lists available at SciVerse ScienceDirect Soil Biology & Biochemistry journal homepage: www.elsevier.com/locate/soilbio Short communication Biological soil crust community types differ in key ecological functions Nicole Pietrasiak a,*, John U. Regus b, Jeffrey R. Johansen c,e, David Lam a, Joel L. Sachs b, Louis S. Santiago d a University of California, Riverside, Soil and Water Sciences Program, Department of Environmental Sciences, 2258 Geology Building, Riverside, CA 92521, USA b University of California, Riverside, Department of Biology, University of California, Riverside, CA 92521, USA c Biology Department, John Carroll University, 1 John Carroll Blvd., University Heights, OH 44118, USA d University of California, Riverside, Botany & Plant Sciences Department, 3113 Bachelor Hall, Riverside, CA 92521, USA e Department of Botany, Faculty of Science, University of South Bohemia, Branisovska 31, 370 05 Ceske Budejovice, Czech Republic article info abstract Article history: Soil stability, nitrogen and carbon fixation were assessed for eight biological soil crust community types Received 22 February 2013 within a Mojave Desert wilderness site. Cyanolichen crust outperformed all other crusts in multi- Received in revised form functionality whereas incipient crust had the poorest performance. A finely divided classification of 17 May 2013 biological soil crust communities improves estimation of ecosystem function and strengthens the Accepted 18 May 2013 accuracy of landscape-scale assessments. -
Biological Soil Crust Rehabilitation in Theory and Practice: an Underexploited Opportunity Matthew A
REVIEW Biological Soil Crust Rehabilitation in Theory and Practice: An Underexploited Opportunity Matthew A. Bowker1,2 Abstract techniques; and (3) monitoring. Statistical predictive Biological soil crusts (BSCs) are ubiquitous lichen–bryo- modeling is a useful method for estimating the potential phyte microbial communities, which are critical structural BSC condition of a rehabilitation site. Various rehabilita- and functional components of many ecosystems. How- tion techniques attempt to correct, in decreasing order of ever, BSCs are rarely addressed in the restoration litera- difficulty, active soil erosion (e.g., stabilization techni- ture. The purposes of this review were to examine the ques), resource deficiencies (e.g., moisture and nutrient ecological roles BSCs play in succession models, the augmentation), or BSC propagule scarcity (e.g., inoc- backbone of restoration theory, and to discuss the prac- ulation). Success will probably be contingent on prior tical aspects of rehabilitating BSCs to disturbed eco- evaluation of site conditions and accurate identification systems. Most evidence indicates that BSCs facilitate of constraints to BSC reestablishment. Rehabilitation of succession to later seres, suggesting that assisted recovery BSCs is attainable and may be required in the recovery of of BSCs could speed up succession. Because BSCs are some ecosystems. The strong influence that BSCs exert ecosystem engineers in high abiotic stress systems, loss of on ecosystems is an underexploited opportunity for re- BSCs may be synonymous with crossing degradation storationists to return disturbed ecosystems to a desirable thresholds. However, assisted recovery of BSCs may trajectory. allow a transition from a degraded steady state to a more desired alternative steady state. In practice, BSC rehabili- Key words: aridlands, cryptobiotic soil crusts, cryptogams, tation has three major components: (1) establishment of degradation thresholds, state-and-transition models, goals; (2) selection and implementation of rehabilitation succession. -
Marine Natural Products: a Source of Novel Anticancer Drugs
marine drugs Review Marine Natural Products: A Source of Novel Anticancer Drugs Shaden A. M. Khalifa 1,2, Nizar Elias 3, Mohamed A. Farag 4,5, Lei Chen 6, Aamer Saeed 7 , Mohamed-Elamir F. Hegazy 8,9, Moustafa S. Moustafa 10, Aida Abd El-Wahed 10, Saleh M. Al-Mousawi 10, Syed G. Musharraf 11, Fang-Rong Chang 12 , Arihiro Iwasaki 13 , Kiyotake Suenaga 13 , Muaaz Alajlani 14,15, Ulf Göransson 15 and Hesham R. El-Seedi 15,16,17,18,* 1 Clinical Research Centre, Karolinska University Hospital, Novum, 14157 Huddinge, Stockholm, Sweden 2 Department of Molecular Biosciences, the Wenner-Gren Institute, Stockholm University, SE 106 91 Stockholm, Sweden 3 Department of Laboratory Medicine, Faculty of Medicine, University of Kalamoon, P.O. Box 222 Dayr Atiyah, Syria 4 Pharmacognosy Department, College of Pharmacy, Cairo University, Kasr el Aini St., P.B. 11562 Cairo, Egypt 5 Department of Chemistry, School of Sciences & Engineering, The American University in Cairo, 11835 New Cairo, Egypt 6 College of Food Science, Fujian Agriculture and Forestry University, Fuzhou, Fujian 350002, China 7 Department of Chemitry, Quaid-i-Azam University, Islamabad 45320, Pakistan 8 Department of Pharmaceutical Biology, Institute of Pharmacy and Biochemistry, Johannes Gutenberg University, Staudingerweg 5, 55128 Mainz, Germany 9 Chemistry of Medicinal Plants Department, National Research Centre, 33 El-Bohouth St., Dokki, 12622 Giza, Egypt 10 Department of Chemistry, Faculty of Science, University of Kuwait, 13060 Safat, Kuwait 11 H.E.J. Research Institute of Chemistry, -
Response of Desert Biological Soil Crusts to Alterations in Precipitation Frequency
Oecologia (2004) 141: 306–316 DOI 10.1007/s00442-003-1438-6 PULSE EVENTS AND ARID ECOSYSTEMS Jayne Belnap . Susan L. Phillips . Mark E. Miller Response of desert biological soil crusts to alterations in precipitation frequency Received: 15 May 2003 / Accepted: 20 October 2003 / Published online: 19 December 2003 # Springer-Verlag 2003 Abstract Biological soil crusts, a community of cyano- treatment. The crusts dominated by the soil lichen bacteria, lichens, and mosses that live on the soil surface, Collema, being dark and protruding above the surface, occur in deserts throughout the world. They are a critical dried the most rapidly, followed by the dark surface component of desert ecosystems, as they are important cyanobacterial crusts (Nostoc-Scytonema-Microcoleus), contributors to soil fertility and stability. Future climate and then by the light cyanobacterial crusts (Microcoleus). scenarios predict alteration of the timing and amount of This order reflected the magnitude of the observed precipitation in desert environments. Because biological response: crusts dominated by the lichen Collema showed soil crust organisms are only metabolically active when the largest decline in quantum yield, chlorophyll a, and wet, and as soil surfaces dry quickly in deserts during late protective pigments; crusts dominated by Nostoc-Scytone- spring, summer, and early fall, the amount and timing of ma-Microcoleus showed an intermediate decline in these precipitation is likely to have significant impacts on the variables; and the crusts dominated by Microcoleus physiological functioning of these communities. Using the showed the least negative response. Most previous studies three dominant soil crust types found in the western of crust response to radiation stress have been short-term United States, we applied three levels of precipitation laboratory studies, where organisms were watered and frequency (50% below-average, average, and 50% above- kept under moderate temperatures. -
Water Regulation in Cyanobacterial Biocrusts from Drylands: Negative Impacts of Anthropogenic Disturbance
water Article Water Regulation in Cyanobacterial Biocrusts from Drylands: Negative Impacts of Anthropogenic Disturbance Yolanda Cantón 1,2,*, Sonia Chamizo 1,2, Emilio Rodriguez-Caballero 1,2 , Roberto Lázaro 3, Beatriz Roncero-Ramos 1 , José Raúl Román 1 and Albert Solé-Benet 3 1 Department of Agronomy, University of Almeria, Carretera de Sacramento sn., La Cañada de San Urbano, 04120 Almeria, Spain; [email protected] (S.C.); [email protected] (E.R.-C.); [email protected] (B.R.-R.); [email protected] (J.R.R.) 2 Research Centre for Scientific Collections from the University of Almería (CECOUAL), Carretera de Sacramento sn., La Cañada de San Urbano, 04120 Almeria, Spain 3 Experimental Station of Arid Zones, CSIC, Carretera de Sacramento sn., La Cañada de San Urbano, 04120 Almeria, Spain; [email protected] (R.L.); [email protected] (A.S.-B.) * Correspondence: [email protected] Received: 26 December 2019; Accepted: 4 March 2020; Published: 6 March 2020 Abstract: Arid and semi-arid ecosystems are characterized by patchy vegetation and variable resource availability. The interplant spaces of these ecosystems are very often covered by cyanobacteria-dominated biocrusts, which are the primary colonizers of terrestrial ecosystems and key in facilitating the succession of other biocrust organisms and plants. Cyanobacterial biocrusts regulate the horizontal and vertical fluxes of water, carbon and nutrients into and from the soil and play crucial hydrological, geomorphological and ecological roles in these ecosystems. In this paper, we analyze the influence of cyanobacterial biocrusts on water balance components (infiltration-runoff, evaporation, soil moisture and non-rainfall water inputs (NRWIs)) in representative semiarid ecosystems in southeastern Spain. -
National Cooperative Soil Survey and Biological Soil Crusts
Biological Soil Crusts Status Report 2003 National Cooperative Soil Survey Conference Plymouth, Massachusetts June 16 - 20, 2003 Table of Contents I. NCSS 2003 National Conference Proceedings II. Report and recommendations of the soil crust task force - 2002 West Regional Cooperative Soil Survey Conference Task Force Members Charges Part I. Executive Summary and Recommendations Part II. Report on Charges Part III. Research Needs, Action Items, Additional Charges Part IV. Resources for Additional Information Part V. Appendices Appendix 1 - Agency needs Appendix 2 - Draft material for incorporation into the Soil Survey Manual Introduction Relationship to Mineral Crusts Types of Biological Soil Crusts Figure 1. Biological soil crust types. Major Components of Soil Crusts: Cyanobacteria, Lichens, and Mosses Table 1. Morphological groups for biological crust components and their N-fixing characteristics. (Belnap et al. 2001) Soil Surface Roughness/Crust Age Distribution of Crusts References Appendix 3 - Guidelines for describing soil surface features, Version 2.0 Surface features Table 1. Surface features Determining Percent Cover Equipment Method 1. Step-point Method 2. Ocular estimate with quadrats Method 3. Line-point quadrat Method 4. Stratified line-point intercept Method 5. Ocular estimate Appendix 3a - Data sheets used in Moab field test Appendix 4 - Soil descriptions Discussion Group 1 Group 3 Group 2 Group 4 Appendix 5 - Photography Biological Soil Crust Status Report NCSS National Conference June 16-20, 2003 Table of Contents III. Task force's response to the following questions posed by the 2002 West Regional Standards Committee 1. Are biological soil crusts plants, soil or combination of both? 2. Is it appropriate to think of these crusts as plant communities with potentials, state and transition? 3. -
Glossary and Acronyms Glossary Glossary
Glossary andChapter Acronyms 1 ©Kevin Fleming ©Kevin Horseshoe crab eggs Glossary and Acronyms Glossary Glossary 40% Migratory Bird “If a refuge, or portion thereof, has been designated, acquired, reserved, or set Hunting Rule: apart as an inviolate sanctuary, we may only allow hunting of migratory game birds on no more than 40 percent of that refuge, or portion, at any one time unless we find that taking of any such species in more than 40 percent of such area would be beneficial to the species (16 U.S.C. 668dd(d)(1)(A), National Wildlife Refuge System Administration Act; 16 U.S.C. 703-712, Migratory Bird Treaty Act; and 16 U.S.C. 715a-715r, Migratory Bird Conservation Act). Abiotic: Not biotic; often referring to the nonliving components of the ecosystem such as water, rocks, and mineral soil. Access: Reasonable availability of and opportunity to participate in quality wildlife- dependent recreation. Accessibility: The state or quality of being easily approached or entered, particularly as it relates to complying with the Americans with Disabilities Act. Accessible facilities: Structures accessible for most people with disabilities without assistance; facilities that meet Uniform Federal Accessibility Standards; Americans with Disabilities Act-accessible. [E.g., parking lots, trails, pathways, ramps, picnic and camping areas, restrooms, boating facilities (docks, piers, gangways), fishing facilities, playgrounds, amphitheaters, exhibits, audiovisual programs, and wayside sites.] Acetylcholinesterase: An enzyme that breaks down the neurotransmitter acetycholine to choline and acetate. Acetylcholinesterase is secreted by nerve cells at synapses and by muscle cells at neuromuscular junctions. Organophosphorus insecticides act as anti- acetyl cholinesterases by inhibiting the action of cholinesterase thereby causing neurological damage in organisms.