Effect of Blood Protease and Trypsin Inhibitor on the Clotting Mechanism
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February 2015
Issue 115 February 2015 A NEWSLETTER OF THE ROCKEFELLER UNIVERSITY COMMUNITY 2015: Chinese New Year of the Sheep Q i o n g Wa n g If I have to name one day of an en- sight of a piece of bright red paper on the poems on a background of red paper. Ex- tire year that I wish dearly to be with my door. Suddenly, firecrackers began to ex- pressing sentiments about life’s renewal, family-on-the-other-side-of-the-planet, plode. Terrified, Nian ran away from the the arrival of spring, and wishes for a it’s the Chinese New Year. Also called village. prosperous year ahead, they’re pasted on Spring Festival, it is the most cherished When the villagers returned the fol- both sides of the main door. These Spring and celebrated holiday in China, as fami- lowing day, they were surprised to find Festival couplets originate from ancient lies reunite to ring out the old year and that everything was safe and sound. The “peach wood charms,” which are carved celebrate the coming new year. According old woman told the story of the beggar. or painted charms depicting protective to the Chinese Animal Zodiac, every year Noticing the red paper on the door and door gods. During the Five Dynasty Pe- is associated with one of twelve animals: the remnants of candles, lanterns, and riod (897-979 AD), Emperor Meng Chang Rat, Ox, Tiger, Rabbit, Dragon, Snake, firecrackers, the villagers suddenly real- ordered his counselor to engrave an in- Horse, Sheep, Monkey, Rooster, Dog, and ized that Nian feared the color red, bright spirational couplet on a pair of peach Pig. -
Trypsin Inhibitor from Glycine Max (Soybean) (T6522)
Trypsin inhibitor from Glycine max (soybean) Cell Culture Tested Product Number T 6522 Storage Temperature 2-8 °C Product Description Precautions and Disclaimer CAS Number: 9035-81-8 For Laboratory Use Only. Not for drug, household or Extinction Coefficient: E1% = 9.94 (280 nm, other uses. pH 7.6 buffer) pI: 4.51 Preparation Instructions Synonyms: Kunitz Trypsin Inhibitor, Tia1, STI, and Trypsin inhibitor is soluble in water and phosphate SBT1 buffers at 10 mg/ml. It is soluble in balanced salt solutions (1 mg/ml) and in serum-free media. This product is cell culture tested and is appropriate Solutions at concentrations higher than 10 mg/ml may for use in cell culture applications. It is extensively be hazy and have a yellow to amber color. dialyzed against water. After dialysis, sodium phosphate buffer, pH 7.6, is added, and the inhibitor is Storage/Stability lyophilized. The final product consists of about 90% A 10 mg/ml sterile-filtered solution stored for greater protein and 10% sodium phosphate buffer salts (by than 3 years at 2-8 °C showed no loss in trypsin mass). inhibition activity. Solutions are stable in frozen aliquots at -20 °C, but freeze-thaw cycles should be 2 Soybean trypsin inhibitor was first isolated by Kunitz. avoided. This protein is reversibly denatured by short Several other related inhibitors are also found in heating to 80 °C and irreversibly inhibited by heating to 3 soybeans. Trypsin inhibitor from soybeans is a 90 °C.3 monomeric protein containing 181 amino acid residues in a single polypeptide chain crosslinked by two 4,5,6 Procedure disulfide bridges. -
Highly Potent and Selective Plasmin Inhibitors Based on the Sunflower Trypsin Inhibitor-1 Scaffold Attenuate Fibrinolysis in Plasma
Highly Potent and Selective Plasmin Inhibitors Based on the Sunflower Trypsin Inhibitor-1 Scaffold Attenuate Fibrinolysis in Plasma Joakim E. Swedberg,‡† Guojie Wu,§† Tunjung Mahatmanto,‡# Thomas Durek,‡ Tom T. Caradoc-Davies,∥ James C. Whisstock,§* Ruby H.P. Law§* and David J. Craik‡* ‡Institute for Molecular Bioscience, The University of Queensland, Brisbane QLD 4072, Australia §ARC Centre of Excellence in Advanced Molecular Imaging, Department of Biochemistry and Molecular Biology, Biomedical Discovery Institute, Monash University, VIC 3800, Australia. ∥Australian Synchrotron, 800 Blackburn Road, Clayton, Melbourne, VIC 3168, Australia. †J.E.S. and G.W. contributed equally to this work. Keywords: Antifibrinolytics; Fibrinolysis; Inhibitors; Peptides; Plasmin ABSTRACT Antifibrinolytic drugs provide important pharmacological interventions to reduce morbidity and mortality from excessive bleeding during surgery and after trauma. Current drugs used for inhibiting the dissolution of fibrin, the main structural component of blood clots, are associated with adverse events due to lack of potency, high doses and non-selective inhibition mechanisms. These deficiencies warrant the development of a new generation highly potent and selective fibrinolysis inhibitors. Here we use the 14-amino acid backbone-cyclic sunflower trypsin inhibitor-1 scaffold to design a highly potent (Ki = 0.05 nM) inhibitor of the primary serine protease in fibrinolysis, plasmin. This compound displays a million-fold selectivity over other serine proteases in blood, inhibits fibrinolysis in plasma more effectively than the gold-standard therapeutic inhibitor aprotinin and is a promising candidate for development of highly specific fibrinolysis inhibitors with reduced side effects. 1 INTRODUCTION The physiological process of fibrinolysis regulates the dissolution of blood clots and thrombosis. -
Winter for the Membership of the American Crystallographic Association, P.O
AMERICAN CRYSTALLOGRAPHIC ASSOCIATION NEWSLETTER Number 4 Winter 2004 ACA 2005 Transactions Symposium New Horizons in Structure Based Drug Discovery Table of Contents / President's Column Winter 2004 Table of Contents President's Column Presidentʼs Column ........................................................... 1-2 The fall ACA Council Guest Editoral: .................................................................2-3 meeting took place in early 2004 ACA Election Results ................................................ 4 November. At this time, News from Canada / Position Available .............................. 6 Council made a few deci- sions, based upon input ACA Committee Report / Web Watch ................................ 8 from the membership. First ACA 2004 Chicago .............................................9-29, 38-40 and foremost, many will Workshop Reports ...................................................... 9-12 be pleased to know that a Travel Award Winners / Commercial Exhibitors ...... 14-23 satisfactory venue for the McPherson Fankuchen Address ................................38-40 2006 summer meeting was News of Crystallographers ...........................................30-37 found. The meeting will be Awards: Janssen/Aminoff/Perutz ..............................30-33 held at the Sheraton Waikiki Obituaries: Blow/Alexander/McMurdie .................... 33-37 Hotel in Honolulu, July 22-27, 2005. Council is ACA Summer Schools / 2005 Etter Award ..................42-44 particularly appreciative of Database Update: -
Characterization of a Bowman–Birk Type Trypsin Inhibitor Purified From
www.nature.com/scientificreports OPEN Characterization of a Bowman–Birk type trypsin inhibitor purifed from seeds of Solanum surattense Abhijeet P. Herwade1, Sainath S. Kasar1,2, Niraj R. Rane3, Shadab Ahmed4, Jaswinder Singh Maras5 & Pankaj K. Pawar6* A Bowman–Birk type trypsin inhibitor protein (SSTI) from seeds of the medicinal plant Solanum surattense was isolated, purifed and characterized. SSTI showed a single band on SDS-PAGE corresponding to 11.4 kDa molecular weight. It is a glycoprotein (2.8% glycosylation) that diferentially interacted with trypsin and chymotrypsin in a concentration-dependent manner. Its peptide sequence is similar to other Bowman–Birk type protease inhibitors found in Glycine max and Phaseolus acutifolius. The inhibitory activity was stable over a wide range of pH (1–10) and temperatures (10–100° C). Far-UV Circular Dichroism (CD) studies showed that SSTI contains β sheets (~ 23%) and α helix (~ 6%) and demonstrated structural stability at wide pH and high temperature. The kinetic analysis revealed a noncompetitive (mixed) type nature of SSTI and low inhibitor constant (Ki) −8 values (16.6 × 10 M) suggested strong inhibitory activity. Isothermal titration calorimetric analysis revealed its high afnity towards trypsin with dissociation constant (Kd) 2.28 µM. Biotic stress induces the generation and accumulation of phenolic compounds and pathogenesis-related (PR) proteins which subsequently prevent an invasion of pests like insects and microbial pathogens1. Most of the plant PR proteins are acid-soluble, low molecular weight and protease enzyme inhibitors 2,3. Protease inhibitors are mainly harbored by four plant families’ viz. Fabaceae, Gramineae, Leguminosae, and Solanaceae4,5. -
Trypsin-Like Proteases and Their Role in Muco-Obstructive Lung Diseases
International Journal of Molecular Sciences Review Trypsin-Like Proteases and Their Role in Muco-Obstructive Lung Diseases Emma L. Carroll 1,†, Mariarca Bailo 2,†, James A. Reihill 1 , Anne Crilly 2 , John C. Lockhart 2, Gary J. Litherland 2, Fionnuala T. Lundy 3 , Lorcan P. McGarvey 3, Mark A. Hollywood 4 and S. Lorraine Martin 1,* 1 School of Pharmacy, Queen’s University, Belfast BT9 7BL, UK; [email protected] (E.L.C.); [email protected] (J.A.R.) 2 Institute for Biomedical and Environmental Health Research, School of Health and Life Sciences, University of the West of Scotland, Paisley PA1 2BE, UK; [email protected] (M.B.); [email protected] (A.C.); [email protected] (J.C.L.); [email protected] (G.J.L.) 3 Wellcome-Wolfson Institute for Experimental Medicine, School of Medicine, Dentistry and Biomedical Sciences, Queen’s University, Belfast BT9 7BL, UK; [email protected] (F.T.L.); [email protected] (L.P.M.) 4 Smooth Muscle Research Centre, Dundalk Institute of Technology, A91 HRK2 Dundalk, Ireland; [email protected] * Correspondence: [email protected] † These authors contributed equally to this work. Abstract: Trypsin-like proteases (TLPs) belong to a family of serine enzymes with primary substrate specificities for the basic residues, lysine and arginine, in the P1 position. Whilst initially perceived as soluble enzymes that are extracellularly secreted, a number of novel TLPs that are anchored in the cell membrane have since been discovered. Muco-obstructive lung diseases (MucOLDs) are Citation: Carroll, E.L.; Bailo, M.; characterised by the accumulation of hyper-concentrated mucus in the small airways, leading to Reihill, J.A.; Crilly, A.; Lockhart, J.C.; Litherland, G.J.; Lundy, F.T.; persistent inflammation, infection and dysregulated protease activity. -
Uterine-Associated Serine Protease Inhibitors Stimulate Deoxyribonucleic Acid Synthesis in Porcine Endometrial Glandular Epithelial Cells of Pregnancy 1
BIOLOGY OF REPRODUCTION 61, 380±387 (1999) Uterine-Associated Serine Protease Inhibitors Stimulate Deoxyribonucleic Acid Synthesis in Porcine Endometrial Glandular Epithelial Cells of Pregnancy 1 Lokenga Badinga, Frank J. Michel, and Rosalia C.M. Simmen2 Animal Molecular and Cell Biology Interdisciplinary Concentration, Department of Animal Science, University of Florida, Gainesville, Florida 32611-0910 ABSTRACT Consistent with this, uteri from mammalian species with distinct placentation types express common classes of pro- Protease inhibitors are major secretory components of the tease inhibitors (e.g., tissue inhibitors of metalloproteases, Downloaded from https://academic.oup.com/biolreprod/article/61/2/380/2734487 by guest on 24 September 2021 mammalian uterus that are thought to mediate pregnancy-as- TIMPs) as well as distinct ones (e.g., secretory leukocyte sociated events primarily by regulating the activity of proteolytic protease inhibitor, SLPI, and uterine plasmin/trypsin inhib- enzymes. In the present study, we examined the mitogenic po- tentials of two serine protease inhibitors, namely secretory leu- itor, UPTI) [4, 8, 9]. Since embryos from all species, re- kocyte protease inhibitor (SLPI) and uterine plasmin/trypsin in- gardless of placentation type, exhibit invasive properties hibitor (UPTI) in primary cultures of glandular epithelial (GE) when placed into ectopic sites [10], the limiting of blasto- cells isolated from early pregnant (Day 12) pig endometrium, cyst invasiveness, albeit to varying extents, is most likely -
Detection of Complexes Between Prostate-Specific Antigen and Protease Inhibitors in Plasma Ulf-Håkan Stenman1*
Clinical Chemistry 56:12 1895–1896 (2010) Citation Classic Detection of Complexes between Prostate-Specific Antigen and Protease Inhibitors in Plasma Ulf-Håkan Stenman1* Featured Article: Stenman UH, Leinonen J, Alfthan H, but not eliminated, by measuring PSA–ACT and total Rannikko S, Tuhkanen K, Alfthan O. A complex between PSA simultaneously with a double-label assay, by cor- ␣ prostate-specific antigen and 1-antichymotrypsin is the recting for the nonspecific background measured sep- major form of prostate-specific antigen in serum of arately in each sample, and by using a monoclonal an- patients with prostatic cancer: assay of the complex im- tibody to the PSA–ACT complex (2). proves clinical sensitivity for cancer. Cancer Res The reason for devoting so much effort to the ac- 1991;51:222–6.2 curate measurement of PSA–ACT was that it is the Prostate-specific antigen (PSA)3 had been in clin- most cancer-specific form of PSA. Other PSA com- ical use for several years when we encountered a prob- plexes may account for up to 10% of total PSA, but ␣ lem with 2 samples that did not give expected results contrary to PSA–ACT, the proportions of PSA- 1- ␣ upon dilution. To explore this finding, we subjected protease inhibitor and PSA- 2-macroglobulin are the samples to gel filtration and found that a major part higher in BPH than in cancer. Thus, measurement of of immunoreactive PSA had a molecular size of about all complexed forms of PSA together is inferior to mea- 90 kD rather than the expected size of 30 kD. -
MOSES KUNITZ December 19, 1887-April 20, 1978
NATIONAL ACADEMY OF SCIENCES M O S E S K UNITZ 1887—1978 A Biographical Memoir by ROGER M. HERRIOTT Any opinions expressed in this memoir are those of the author(s) and do not necessarily reflect the views of the National Academy of Sciences. Biographical Memoir COPYRIGHT 1989 NATIONAL ACADEMY OF SCIENCES WASHINGTON D.C. MOSES KUNITZ December 19, 1887-April 20, 1978 BY ROGER M. HERRIOTT OSES KUNITZ is best remembered for his isolation and M crystallization of a half-dozen enzymes and precursors. This work had two important effects. First, the variety of the enzymes he isolated and the clarity of his evidence that the enzymes were proteins convinced those who had reserved judgment on the earlier reports of Sumner, Northrop, Cald- well, et al. Second, his reports of the crystallization of ribo- nuclease and desoxyribonuclease, which appeared just as the functions of nucleic acids were beginning to be explored, provided information on the high specificity of these en- zymes. This information made them valuable tools for other researchers in their purification or the assignment of a bio- logical function to either RNA or DNA, the two types of nucleic acid. Moses Kunitz was born on December 19, 1887, in Slonim, Russia, where he was educated before emigrating to the United States. In 1909, he took up residence in New York City. Entering the Cooper Union School of Chemistry in 1910, he graduated with a bachelor of science degree in 1916. In the fall of that year, he entered the Electrical Engi- neering School of Cooper Union, where he studied until 1919 when he transferred to the Columbia University School of Mines Engineering and Chemistry. -
TMPRSS2 and Furin Are Both Essential for Proteolytic Activation and Spread of SARS-Cov-2 in Human Airway Epithelial Cells and Pr
bioRxiv preprint doi: https://doi.org/10.1101/2020.04.15.042085; this version posted April 15, 2020. The copyright holder for this preprint (which was not certified by peer review) is the author/funder, who has granted bioRxiv a license to display the preprint in perpetuity. It is made available under aCC-BY-NC-ND 4.0 International license. 1 TMPRSS2 and furin are both essential for proteolytic activation and spread of SARS- 2 CoV-2 in human airway epithelial cells and provide promising drug targets 3 4 5 Dorothea Bestle1#, Miriam Ruth Heindl1#, Hannah Limburg1#, Thuy Van Lam van2, Oliver 6 Pilgram2, Hong Moulton3, David A. Stein3, Kornelia Hardes2,4, Markus Eickmann1,5, Olga 7 Dolnik1,5, Cornelius Rohde1,5, Stephan Becker1,5, Hans-Dieter Klenk1, Wolfgang Garten1, 8 Torsten Steinmetzer2, and Eva Böttcher-Friebertshäuser1* 9 10 1) Institute of Virology, Philipps-University, Marburg, Germany 11 2) Institute of Pharmaceutical Chemistry, Philipps-University, Marburg, Germany 12 3) Department of Biomedical Sciences, Carlson College of Veterinary Medicine, Oregon 13 State University, Corvallis, USA 14 4) Fraunhofer Institute for Molecular Biology and Applied Ecology, Gießen, Germany 15 5) German Center for Infection Research (DZIF), Marburg-Gießen-Langen Site, Emerging 16 Infections Unit, Philipps-University, Marburg, Germany 17 18 #These authors contributed equally to this work. 19 20 *Corresponding author: Eva Böttcher-Friebertshäuser 21 Institute of Virology, Philipps-University Marburg 22 Hans-Meerwein-Straße 2, 35043 Marburg, Germany 23 Tel: 0049-6421-2866019 24 E-mail: [email protected] 25 26 Short title: TMPRSS2 and furin activate SARS-CoV-2 spike protein 27 28 1 bioRxiv preprint doi: https://doi.org/10.1101/2020.04.15.042085; this version posted April 15, 2020. -
Plant Serine Protease Inhibitors: Biotechnology Application in Agriculture and Molecular Farming
International Journal of Molecular Sciences Review Plant Serine Protease Inhibitors: Biotechnology Application in Agriculture and Molecular Farming Marina Clemente *, Mariana G. Corigliano, Sebastián A. Pariani, Edwin F. Sánchez-López, Valeria A. Sander and Víctor A. Ramos-Duarte Instituto Tecnológico Chascomús (INTECH), UNSAM-CONICET, Chascomús, Provincia de Buenos Aires B7130, Argentina; [email protected] (M.G.C.); [email protected] (S.A.P.); [email protected] (E.F.S.-L.); [email protected] (V.A.S.); [email protected] (V.A.R.-D.) * Correspondence: [email protected] Received: 12 January 2019; Accepted: 18 February 2019; Published: 17 March 2019 Abstract: The serine protease inhibitors (SPIs) are widely distributed in living organisms like bacteria, fungi, plants, and humans. The main function of SPIs as protease enzymes is to regulate the proteolytic activity. In plants, most of the studies of SPIs have been focused on their physiological role. The initial studies carried out in plants showed that SPIs participate in the regulation of endogenous proteolytic processes, as the regulation of proteases in seeds. Besides, it was observed that SPIs also participate in the regulation of cell death during plant development and senescence. On the other hand, plant SPIs have an important role in plant defense against pests and phytopathogenic microorganisms. In the last 20 years, several transgenic plants over-expressing SPIs have been produced and tested in order to achieve the increase of the resistance against pathogenic insects. Finally, in molecular farming, SPIs have been employed to minimize the proteolysis of recombinant proteins expressed in plants. The present review discusses the potential biotechnological applications of plant SPIs in the agriculture field. -
Research Organizations and Major Discoveries in Twentieth-Century Science: a Case Study of Excellence in Biomedical Research Hollingsworth, J
www.ssoar.info Research organizations and major discoveries in twentieth-century science: a case study of excellence in biomedical research Hollingsworth, J. Rogers Veröffentlichungsversion / Published Version Arbeitspapier / working paper Zur Verfügung gestellt in Kooperation mit / provided in cooperation with: SSG Sozialwissenschaften, USB Köln Empfohlene Zitierung / Suggested Citation: Hollingsworth, J. R. (2002). Research organizations and major discoveries in twentieth-century science: a case study of excellence in biomedical research. (Papers / Wissenschaftszentrum Berlin für Sozialforschung, 02-003). Berlin: Wissenschaftszentrum Berlin für Sozialforschung gGmbH. https://nbn-resolving.org/urn:nbn:de:0168-ssoar-112976 Nutzungsbedingungen: Terms of use: Dieser Text wird unter einer Deposit-Lizenz (Keine This document is made available under Deposit Licence (No Weiterverbreitung - keine Bearbeitung) zur Verfügung gestellt. Redistribution - no modifications). We grant a non-exclusive, non- Gewährt wird ein nicht exklusives, nicht übertragbares, transferable, individual and limited right to using this document. persönliches und beschränktes Recht auf Nutzung dieses This document is solely intended for your personal, non- Dokuments. Dieses Dokument ist ausschließlich für commercial use. All of the copies of this documents must retain den persönlichen, nicht-kommerziellen Gebrauch bestimmt. all copyright information and other information regarding legal Auf sämtlichen Kopien dieses Dokuments müssen alle protection. You are not allowed