BIRD SONG: the Interface of Evolution and Mechanism
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History and Philosophy of Systematic Biology
History and Philosophy of Systematic Biology Bock, W. J. (1973) Philosophical foundations of classical evolutionary classification Systematic Zoology 22: 375-392 Part of a general symposium on "Contemporary Systematic Philosophies," there are some other interesting papers here. Brower, A. V. Z. (2000) Evolution Is Not a Necessary Assumption of Cladistics Cladistics 16: 143- 154 Dayrat, Benoit (2005) Ancestor-descendant relationships and the reconstruction of the Tree of Lif Paleobiology 31: 347-353 Donoghue, M.J. and J.W. Kadereit (1992) Walter Zimmermann and the growth of phylogenetic theory Systematic Biology 41: 74-84 Faith, D. P. and J. W. H. Trueman (2001) Towards an inclusive philosophy for phylogenetic inference Systematic Biology 50: 331-350 Gaffney, E. S. (1979) An introduction to the logic of phylogeny reconstruction, pp. 79-111 in Cracraft, J. and N. Eldredge (eds.) Phylogenetic Analysis and Paleontology Columbia University Press, New York. Gilmour, J. S. L. (1940) Taxonomy and philosophy, pp. 461-474 in J. Huxley (ed.) The New Systematics Oxford Hull, D. L. (1978) A matter of individuality Phil. of Science 45: 335-360 Hull, D. L. (1978) The principles of biological classification: the use and abuse of philosophy Hull, D. L. (1984) Cladistic theory: hypotheses that blur and grow, pp. 5-23 in T. Duncan and T. F. Stuessy (eds.) Cladistics: Perspectives on the Reconstruction of Evolutionary History Columbia University Press, New York * Hull, D. L. (1988) Science as a process: an evolutionary account of the social and conceptual development of science University of Chicago Press. An already classic work on the recent, violent history of systematics; used as data for Hull's general theories about scientific change. -
1. Adaptation and the Evolution of Physiological Characters
Bennett, A. F. 1997. Adaptation and the evolution of physiological characters, pp. 3-16. In: Handbook of Physiology, Sect. 13: Comparative Physiology. W. H. Dantzler, ed. Oxford Univ. Press, New York. 1. Adaptation and the evolution of physiological characters Department of Ecology and Evolutionary Biology, University of California, ALBERT F. BENNETT 1 Irvine, California among the biological sciences (for example, behavioral CHAPTER CONTENTS science [I241). The Many meanings of "Adaptationn In general, comparative physiologists have been Criticisms of Adaptive Interpretations much more successful in, and have devoted much more Alternatives to Adaptive Explanations energy to, pursuing the former rather than the latter Historical inheritance goal (37). Most of this Handbook is devoted to an Developmentai pattern and constraint Physical and biomechanical correlation examination of mechanism-how various physiologi- Phenotypic size correlation cal systems function in various animals. Such compara- Genetic correlations tive studies are usually interpreted within a specific Chance fixation evolutionary context, that of adaptation. That is, or- Studying the Evolution of Physiological Characters ganisms are asserted to be designed in the ways they Macroevolutionary studies Microevolutionary studies are and to function in the ways they do because of Incorporating an Evolutionary Perspective into Physiological Studies natural selection which results in evolutionary change. The principal textbooks in the field (for example, refs. 33, 52, 102, 115) make explicit reference in their titles to the importance of adaptation to comparative COMPARATIVE PHYSIOLOGISTS HAVE TWO GOALS. The physiology, as did the last comparative section of this first is to explain mechanism, the study of how organ- Handbook (32). Adaptive evolutionary explanations isms are built functionally, "how animals work" (113). -
Effects of Alcoholism and Alcoholic Detoxication on the Repair and Biomechanics of Bone
EFEITOS DO ALCOOLISMO E DA DESINTOXICAÇÃO ALCOÓLICA SOBRE O REPARO E BIOMECÂNICA ÓSSEA EFFECTS OF ALCOHOLISM AND ALCOHOLIC DETOXICATION ON THE REPAIR AND BIOMECHANICS OF BONE RENATO DE OLIVEIRA HORvaTH1, THIAGO DONIZETH DA SILva1, JAMIL CALIL NETO1, WILSON ROMERO NAKAGAKI2, JOSÉ ANTONIO DIAS GARCIA1, EVELISE ALINE SOARES1. RESUMO ABSTRACT Objetivo: Avaliar os efeitos do consumo crônico de etanol e da desin- Objective: To evaluate the effects of chronic ethanol consumption toxicação alcoólica sobre a resistência mecânica do osso e neofor- and alcohol detoxication on the mechanical resistance of bone and mação óssea junto a implantes de hidroxiapatita densa (HAD) reali- bone neoformation around dense hydroxyapatite implants (DHA) zados em ratos. Métodos: Foram utilizados 15 ratos divididos em três in rats. Methods: Fifteen rats were separated into three groups: (1) grupos, sendo controle (CT), alcoolista crônico (AC) e desintoxicado control group (CT); (2) chronic alcoholic (CA), and (3) disintoxicated (DE). Após quatro semanas, foi realizada implantação de HAD na (DI). After four weeks, a DHA was implanted in the right tibia of the tíbia e produzida falha no osso parietal, em seguida o grupo AC con- animals, and the CA group continued consuming ethanol, while the tinuaram a consumir etanol e o grupo DE iniciaram a desintoxicação. DI group started detoxication. The solid and liquid feeding of the Ao completar 13 semanas os animais sofreram eutanásia, os ossos animals was recorded, and a new alcohol dilution was effected every foram coletados para o processamento histomorfométrico e os fêmu- 48 hours. After 13 weeks, the animals were euthanized and their res encaminhados ao teste mecânico de resistência. -
Biomechanics (BMCH) 1
Biomechanics (BMCH) 1 BMCH 4640 ORTHOPEDIC BIOMECHANICS (3 credits) BIOMECHANICS (BMCH) Orthopedic Biomechanics focuses on the use of biomechanical principles and scientific methods to address clinical questions that are of particular BMCH 1000 INTRODUCTION TO BIOMECHANICS (3 credits) interest to professionals such as orthopedic surgeons, physical therapists, This is an introductory course in biomechanics that provides a brief history, rehabilitation specialists, and others. (Cross-listed with BMCH 8646). an orientation to the profession, and explores the current trends and Prerequisite(s)/Corequisite(s): BMCH 4630 or department permission. problems and their implications for the discipline. BMCH 4650 NEUROMECHANICS OF HUMAN MOVEMENT (3 credits) Distribution: Social Science General Education course A study of basic principles of neural process as they relate to human BMCH 1100 ETHICS OF SCIENTIFIC RESEARCH (3 credits) voluntary movement. Applications of neural and mechanical principles This course is a survey of the main ethical issues in scientific research. through observations and assessment of movement, from learning to Distribution: Humanities and Fine Arts General Education course performance, as well as development. (Cross-listed with NEUR 4650). Prerequisite(s)/Corequisite(s): BMCH 1000 or PE 2430. BMCH 2200 ANALYTICAL METHODS IN BIOMECHANICS (3 credits) Through this course, students will learn the fundamentals of programming BMCH 4660 CLINICAL IMMERSION FOR RESEARCH AND DESIGN (3 and problem solving for biomechanics with Matlab -
Thinking with Birds: Mary Elizabeth Barber's Advocacy for Gender
Thinking with Birds: Mary Elizabeth Barber’s Advocacy for Gender Equality in Ornithology TANJA HAMMEL Department of History, University of Basel This article explores parts of the first South African woman ornithologist’s life and work. It concerns itself with the micro-politics of Mary Elizabeth Barber’s knowledge of birds from the 1860s to the mid-1880s. Her work provides insight into contemporary scientific practices, particularly the importance of cross-cultural collaboration. I foreground how she cultivated a feminist Darwinism in which birds served as corroborative evidence for female selection and how she negotiated gender equality in her ornithological work. She did so by constructing local birdlife as a space of gender equality. While male ornithologists naturalised and reinvigorated Victorian gender roles in their descriptions and depictions of birds, she debunked them and stressed the absence of gendered spheres in bird life. She emphasised the female and male birds’ collaboration and gender equality that she missed in Victorian matrimony, an institution she harshly criticised. Reading her work against the background of her life story shows how her personal experiences as wife and mother as well as her observation of settler society informed her view on birds, and vice versa. Through birds she presented alternative relationships to matrimony. Her protection of insectivorous birds was at the same time an attempt to stress the need for a New Woman, an aspect that has hitherto been overlooked in studies of the transnational anti-plumage -
Auditory Experience Controls the Maturation of Song Discrimination and Sexual Response in Drosophila Xiaodong Li, Hiroshi Ishimoto, Azusa Kamikouchi*
RESEARCH ARTICLE Auditory experience controls the maturation of song discrimination and sexual response in Drosophila Xiaodong Li, Hiroshi Ishimoto, Azusa Kamikouchi* Graduate School of Science, Nagoya University, Nagoya, Japan Abstract In birds and higher mammals, auditory experience during development is critical to discriminate sound patterns in adulthood. However, the neural and molecular nature of this acquired ability remains elusive. In fruit flies, acoustic perception has been thought to be innate. Here we report, surprisingly, that auditory experience of a species-specific courtship song in developing Drosophila shapes adult song perception and resultant sexual behavior. Preferences in the song-response behaviors of both males and females were tuned by social acoustic exposure during development. We examined the molecular and cellular determinants of this social acoustic learning and found that GABA signaling acting on the GABAA receptor Rdl in the pC1 neurons, the integration node for courtship stimuli, regulated auditory tuning and sexual behavior. These findings demonstrate that maturation of auditory perception in flies is unexpectedly plastic and is acquired socially, providing a model to investigate how song learning regulates mating preference in insects. DOI: https://doi.org/10.7554/eLife.34348.001 Introduction Vocal learning in infants or juvenile birds relies heavily on the early experience of the adult conspe- cific sounds. In humans, early language input is necessary to form the ability of phonetic distinction *For correspondence: and pattern detection in the phase of auditory learning (Doupe and Kuhl, 1999; Kuhl, 2004). [email protected] Because of the strong parallels between speech acquisition of humans and song learning of song- Competing interests: The birds, and the difficulties to investigate the neural mechanisms of human early auditory memory at authors declare that no cellular resolution, songbirds have been used as a predominant model in studying memory formation competing interests exist. -
Observebserve a D Dinosaurinosaur
OOBSERVEBSERVE A DDINOSAURINOSAUR How did ancient dinosaurs move and behave? To fi nd out, paleontologists look for clues in fossils, such as fossilized footprints, eggs, and even dung. They also observe and analyze the movement and behavior of living dinosaurs and other animals. These data help paleontologists interpret the fossil evidence. You can also observe living dinosaurs. Go outdoors to fi nd birds in their natural habitat. (Or you can use online bird videos, such as the Cornell Lab of Ornithology’s video gallery at www.birds.cornell.edu/AllAboutBirds/ BirdGuide/VideoGallery.html) 1. Record Your Observations What Evidence IndiCates In a notebook, fi rst record information That Birds Are Dinosaurs? about the environment: Over 125 years ago, paleontologists made a startling discovery. They • Date and Time recognized that the physical characteristics of modern birds and a • Location and Habitat species of small carnivorous dinosaur were alike. • Weather and temperature Take a look at the skeletons of roadrunner (a modern bird) and Coelophysis (an extinct dinosaur) to explore some of these shared Then observe a bird and record: characteristics. Check out the bones labeled on the roadrunner. • How does the bird move? Can you fi nd and label similar bones on the Coelophysis? • What does the bird eat? ROADRUNNER • Is the bird alone or in a group? S-shaped neck • How does the bird behave with Hole in hip socket members of its species? • How does the bird behave with members of other species? V-shaped furcula Pubis bone in hip (wishbone) points backwards Tips: • Weather conditions can affect how animals behave. -
Burmese Amber Taxa
Burmese (Myanmar) amber taxa, on-line supplement v.2021.1 Andrew J. Ross 21/06/2021 Principal Curator of Palaeobiology Department of Natural Sciences National Museums Scotland Chambers St. Edinburgh EH1 1JF E-mail: [email protected] Dr Andrew Ross | National Museums Scotland (nms.ac.uk) This taxonomic list is a supplement to Ross (2021) and follows the same format. It includes taxa described or recorded from the beginning of January 2021 up to the end of May 2021, plus 3 species that were named in 2020 which were missed. Please note that only higher taxa that include new taxa or changed/corrected records are listed below. The list is until the end of May, however some papers published in June are listed in the ‘in press’ section at the end, but taxa from these are not yet included in the checklist. As per the previous on-line checklists, in the bibliography page numbers have been added (in blue) to those papers that were published on-line previously without page numbers. New additions or changes to the previously published list and supplements are marked in blue, corrections are marked in red. In Ross (2021) new species of spider from Wunderlich & Müller (2020) were listed as being authored by both authors because there was no indication next to the new name to indicate otherwise, however in the introduction it was indicated that the author of the new taxa was Wunderlich only. Where there have been subsequent taxonomic changes to any of these species the authorship has been corrected below. -
BIRDING— Fun and Science by Phyllis Mcintosh
COM . TOCK S HUTTER © S © BIRDING— Fun and Science by Phyllis McIntosh For passionate birdwatcher Sandy Komito of over age 16 say they actively observe and try to iden- Fair Lawn, New Jersey, 1998 was a big year. In a tify birds, although few go to the extremes Komito tight competition with two fellow birders to see as did. About 88 percent are content to enjoy bird many species as possible in a single year, Komito watching in their own backyards or neighborhoods. traveled 270,000 miles, crisscrossing North Amer- More avid participants plan vacations around ica and voyaging far out to sea to locate rare and their hobby and sometimes travel long distances to elusive birds. In the end, he set a North American view a rare species and add it to their lifelong list of record of 748 species, topping his own previous birds spotted. Many birdwatchers, both casual and record of 726, which had stood for 11 years. serious, also function as citizen scientists, provid- Komito and his fellow competitors are not alone ing valuable data to help scientists monitor bird in their love of birds. According to a U.S. Fish and populations and create management guidelines to Wildlife Service survey, about one in five Americans protect species in decline. 36 2 0 1 4 N UMBER 1 | E NGLISH T E ACHING F ORUM Birding Basics The origins of bird watching in the United States date back to the late 1800s when conserva- tionists became concerned about the hunting of birds to supply feathers for the fashion industry. -
Quantitative Methodologies to Dissect Immune Cell Mechanobiology
cells Review Quantitative Methodologies to Dissect Immune Cell Mechanobiology Veronika Pfannenstill 1 , Aurélien Barbotin 1 , Huw Colin-York 1,* and Marco Fritzsche 1,2,* 1 Kennedy Institute for Rheumatology, University of Oxford, Roosevelt Drive, Oxford OX3 7LF, UK; [email protected] (V.P.); [email protected] (A.B.) 2 Rosalind Franklin Institute, Harwell Campus, Didcot OX11 0FA, UK * Correspondence: [email protected] (H.C.-Y.); [email protected] (M.F.) Abstract: Mechanobiology seeks to understand how cells integrate their biomechanics into their function and behavior. Unravelling the mechanisms underlying these mechanobiological processes is particularly important for immune cells in the context of the dynamic and complex tissue microen- vironment. However, it remains largely unknown how cellular mechanical force generation and mechanical properties are regulated and integrated by immune cells, primarily due to a profound lack of technologies with sufficient sensitivity to quantify immune cell mechanics. In this review, we discuss the biological significance of mechanics for immune cells across length and time scales, and highlight several experimental methodologies for quantifying the mechanics of immune cells. Finally, we discuss the importance of quantifying the appropriate mechanical readout to accelerate insights into the mechanobiology of the immune response. Keywords: mechanobiology; biomechanics; force; immune response; quantitative technology Citation: Pfannenstill, V.; Barbotin, A.; Colin-York, H.; Fritzsche, M. Quantitative Methodologies to Dissect 1. Introduction Immune Cell Mechanobiology. Cells The development of novel quantitative technologies and their application to out- 2021, 10, 851. https://doi.org/ standing scientific problems has often paved the way towards ground-breaking biological 10.3390/cells10040851 findings. -
Human Locomotion Biomechanics - B
BIOMECHANICS - Human Locomotion Biomechanics - B. M. Nigg, G. Kuntze HUMAN LOCOMOTION BIOMECHANICS B. M. Nigg, Human Performance Laboratory, University of Calgary, Calgary, Canada G. Kuntze, Faculty of Kinesiology, University of Calgary, Calgary, Canada Keywords: Loading, Performance, Kinematics, Force, EMG, Acceleration, Pressure, Modeling, Data Analysis. Contents 1. Introduction 2. Typical questions in locomotion biomechanics 3. Experimental quantification 4. Model calculation 5. Data analysis Glossary Bibliography Biographical Sketches Summary This chapter summarizes typical questions in human locomotion biomechanics and current approaches used for scientific investigation. The aim of the chapter is to (1) provide the reader with an overview of the research discipline, (2) identify the objectives of human locomotion biomechanics, (3) summarize current approaches for quantifying the effects of changes in conditions on task performance, and (4) to give an introduction to new developments in this area of research. 1. Introduction Biomechanics may be defined as “The science that examines forces acting upon and within a biological structure and effects produced by such forces”. External forces, acting upon a system, and internal forces, resulting from muscle activity and/or external forces, are assessed using sophisticated measuring devices or estimations from model calculations. The possible results of external and internal forces are: Movements of segments of interest; Deformation of biological material and; Biological changes in tissue(s) on which they act. Consequently, biomechanical research studies/quantifies the movement of different body segments and the biological effects of locally acting forces on living tissue. Biomechanical research addresses several different areas of human and animal movement. It includes studies on (a) the functioning of muscles, tendons, ligaments, cartilage, and bone, (b) load and overload of specific structures of living systems, and (c) factors influencing performance. -
Beginning Birdwatching 2021 Resource List
Beginning Birdwatching 2021 Resource List Field Guides and how-to Birds of Illinois-Sheryl Devore and Steve Bailey The New Birder’s Guide to Birds of North America-Bill Thompson III Sibley’s Birding Basics-David Sibley Peterson Guide to Bird Identification-in 12 Steps-Howell and Sullivan Clubs and Organizations Chicago Ornithological Society-www.chicagobirder.org DuPage Birding Club-www.dupagebirding.org Evanston-North Shore Bird Club-www.ensbc.org Illinois Audubon Society-www.illinoisaudubon.org Will, Kane, Lake Cook county Audubon chapters (and others in Illinois) Illinois Ornithological Society-www.illinoisbirds.org Illinois Young Birders-(ages 9-18) monthly field trips and yearly symposiums Wild Things Conference 2021 American Birding Association- aba.org On-line Resources Cornell Lab of Ornithology All About Birds, eBird, Birdcast Radar, Macaulay Library (sounds), Youtube series: Inside Birding: Shape, Habitat, Behavior DuPage Birding Club-Youtube channel, Mini-tutorials, Bird-O-Bingo card, DuPage hot spot descriptions Facebook: Illinois Birding Network, Illinois Rare Bird Alert, World Girl Birders, Raptor ID, What’s this Bird? Birdnote-can subscribe for informative, weekly emails-also Podcast Birdwatcher’s Digest podcasts: Out There With the Birds, Birdsense Podcasts: Laura Erickson’s For the Birds, Ray Brown’s Talkin’ Birds, American Birding Podcast (ABA) Blog: Jeff Reiter’s “Words on Birds” (meet Jeff on his monthly walks at Cantigny, see DuPage Birding Club website for schedule) Illinois Birding by County-countywiki.ilbirds.com