Nitrification
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Nitrobacter As an Indicator of Toxicity in Wastewater
State Water Survey Division WATER QUALITY SECTION AT Illinois Department of PEORIA, ILLINOIS Energy and Natural Resources SWS Contract Report 326 NITROBACTER AS AN INDICATOR OF TOXICITY IN WASTEWATER by Wuncheng Wang and Paula Reed Prepared for and funded by the Illinois Department of Energy and Natural Resources September 1983 CONTENTS PAGE Abstract 1 Introduction 1 Scope of study 3 Acknowledgments 3 Literature review 3 Microbial nitrification 3 Influence of toxicants on nitrification 5 Materials and methods 10 Culture 10 Methods 11 Results 12 Preliminary tests 13 Metal toxicity 13 Organic compounds toxicity 16 Time effect 22 Discussion 22 References 27 NITROBACTER AS AN INDICATOR OF TOXICITY IN WASTEWATER by Wuncheng Wang and Paula Reed ABSTRACT This report presents the results of a study of the use of Nitrobacter as an indicator of toxicity. Nitrobacter are strictly aerobic, autotrophic, and slow growing bacteria. Because they convert nitrite to nitrate, the effects that toxins have on them can be detected easily by monitoring changes in their nitrite consumption rate. The bacterial cultures were obtained from two sources — the Peoria and Princeton (Illinois) wastewater treatment plants — and tests were con• ducted to determine the effects on the cultures of inorganic ions and organic compounds. The inorganic ions included cadmium, copper, lead, and nickel. The organic compounds were phenol, chlorophenol (three derivatives), dichlo- rophenol (two derivatives), and trichlorophenol. The bioassay procedure is relatively simple and the results are repro• ducible . The effects of these chemical compounds on Nitrobacter were not dramatic. For example, of the compounds tested, 2,4,6-trichlorophenol was the most toxic to Nitrobacter. -
Human Alteration of the Global Nitrogen Cycle
What is Nitrogen? Human Alteration of the Nitrogen is the most abundant element in Global Nitrogen Cycle the Earth’s atmosphere. Nitrogen makes up 78% of the troposphere. Nitrogen cannot be absorbed directly by the plants and animals until it is converted into compounds they can use. This process is called the Nitrogen Cycle. Heather McGraw, Mandy Williams, Suzanne Heinzel, and Cristen Whorl, Give SIUE Permission to Put Our Presentation on E-reserve at Lovejoy Library. The Nitrogen Cycle How does the nitrogen cycle work? Step 1- Nitrogen Fixation- Special bacteria convert the nitrogen gas (N2 ) to ammonia (NH3) which the plants can use. Step 2- Nitrification- Nitrification is the process which converts the ammonia into nitrite ions which the plants can take in as nutrients. Step 3- Ammonification- After all of the living organisms have used the nitrogen, decomposer bacteria convert the nitrogen-rich waste compounds into simpler ones. Step 4- Denitrification- Denitrification is the final step in which other bacteria convert the simple nitrogen compounds back into nitrogen gas (N2 ), which is then released back into the atmosphere to begin the cycle again. How does human intervention affect the nitrogen cycle? Nitric Oxide (NO) is released into the atmosphere when any type of fuel is burned. This includes byproducts of internal combustion engines. Production and Use of Nitrous Oxide (N2O) is released into the atmosphere through Nitrogen Fertilizers bacteria in livestock waste and commercial fertilizers applied to the soil. Removing nitrogen from the Earth’s crust and soil when we mine nitrogen-rich mineral deposits. Discharge of municipal sewage adds nitrogen compounds to aquatic ecosystems which disrupts the ecosystem and kills fish. -
Nitrogen Removal Training Program
Nitrogen Removal Training Program Module 1 Nitrogen in the Aquatic Environment • Forms of Nitrogen and Nitrogen Transformations • Nitrogen in Surface Waters • Water Quality Impacts of Nitrogen Discharges • Nitrogen in Wastewater Module 1 Transparency 1 Nitrogen Removal Training Program Module 1 Forms of Nitrogen and Nitrogen Transformations Module 1 Transparency 2 Forms of Nitrogen in the Environment Unoxidized Forms Oxidized Forms of Nitrogen of Nitrogen Nitrite (NO -) • Nitrogen Gas (N2) • 2 + Nitrate (NO -) • Ammonia (NH4 , NH3) • 3 • Organic Nitrogen (urea, • Nitrous Oxide (N2O) amino acids, peptides, proteins, etc...) • Nitric Oxide (NO) • Nitrogen Dioxide (NO2) Module 1 Transparency 3 Nitrogen Fixation • Biological Fixation - Use of atmospheric nitrogen by certain photosynthetic blue-green algae and bacteria for growth. Nitrogen Gas Organic Nitrogen (N2) • Lightning Fixation - Conversion of atmospheric nitrogen to nitrate by lightning. lightning Nitrogen Gas + Ozone Nitrate - (N2) (O3)(NO3 ) • Industrial Fixation - Conversion of nitrogen gas to ammonia and nitrate-nitrogen (used in the manufacture of fertilizers and explosives). Module 1 Transparency 4 Biological Nitrogen Fixation Nitrogen Gas (N2) Bacteria Blue-green Algae Organic N Organic N Certain blue-green algae and bacteria use atmospheric nitrogen to produce organic nitrogen compounds. Module 1 Transparency 5 Atmospheric Fixation Lightning converts Nitrogen Gas and Ozone to Nitrate. Nitrogen Gas Nitrate Module 1 Transparency 6 Industrial Fixation N2 Nitrogen gas is converted to ammonia and nitrate in the production of fertilizer and explosives. NH3 - NO3 Module 1 Transparency 7 Ammonification and Assimilation Ammonification - Conversion of organic nitrogen to ammonia-nitrogen resulting from the biological decomposition of dead plant and animal tissue and animal fecal matter. -
Recycling of Vitamin B12 and NAD+ Within the Pdu Microcompartment of Salmonella Enterica Shouqiang Cheng Iowa State University
Iowa State University Capstones, Theses and Graduate Theses and Dissertations Dissertations 2010 Recycling of vitamin B12 and NAD+ within the Pdu microcompartment of Salmonella enterica Shouqiang Cheng Iowa State University Follow this and additional works at: https://lib.dr.iastate.edu/etd Part of the Biochemistry, Biophysics, and Structural Biology Commons Recommended Citation Cheng, Shouqiang, "Recycling of vitamin B12 and NAD+ within the Pdu microcompartment of Salmonella enterica" (2010). Graduate Theses and Dissertations. 11713. https://lib.dr.iastate.edu/etd/11713 This Dissertation is brought to you for free and open access by the Iowa State University Capstones, Theses and Dissertations at Iowa State University Digital Repository. It has been accepted for inclusion in Graduate Theses and Dissertations by an authorized administrator of Iowa State University Digital Repository. For more information, please contact [email protected]. + Recycling of vitamin B12 and NAD within the Pdu microcompartment of Salmonella enterica by Shouqiang Cheng A dissertation submitted to the graduate faculty in partial fulfillment of the requirements for the degree of DOCTOR OF PHILOSOPHY Major: Biochemistry Program of Study Committee: Thomas A. Bobik, Major Professor Alan DiSpirito Basil Nikolau Reuben Peters Gregory J. Phillips Iowa State University Ames, Iowa 2010 Copyright © Shouqiang Cheng, 2010. All rights reserved. ii Table of contents Abstract............................................................................................................................. -
Organic Matter Decomposition in Simulated Aquaculture Ponds Group Fish Culture and Fisheries Daily Supervisor(S) Dr
O rganic matter decomposition in simulated aquaculture ponds Beatriz Torres Beristain Promotor: Prof. Dr. J.A .J. V erreth H oogleraar in de V isteelt en V isserij W ageningen U niversiteit C o-promotor: Dr. M .C .J. V erdegem U niversitair docent bij the Leerstoelgroep V isteelt en V isserij W ageningen U niversiteit Samenstelling promotiecommissie: Prof. Dr. Y . A vnimelech Technion, Israel Institute of Technology Prof. Dr. Ir. H .J. Gijzen U N ESC O -IH E, Delf, N etherlands Prof. Dr. Ir. M . W .A . V erstegen W ageningen U niversiteit Prof. Dr. Ir. A .A . K oelmans W ageningen U niversiteit Dit onderzoek is uitgevoerd binnen de onderzoekschool W IA S O rganic matter decomposition in simulated aquaculture ponds Beatriz Torres Beristain Proefschrift Ter verkrijging van de graad van doctor O p gezag van de rector magnificus van W ageningen U niversiteit, Prof. Dr. Ir. L. Speelman, In het openbaar te verdedigen O p dinsdag 15 A pril 2005 des namiddags te half tw ee in de A ula Torres Beristain, B. O rganic matter decomposition in simulated aquaculture ponds PhD thesis, Fish C ulture and Fisheries Group, W ageningen Institute of A nimal Sciences. W ageningen U niversity, P.O . Box 338, 6700 A H W ageningen, The N etherlands. - W ith R ef. œW ith summary in Spanish, Dutch and English ISBN : 90-8504-170-8 A Domingo, Y olanda y A lejandro Table of contents C hapter 1 General introduction. 1 C hapter 2 R eview microbial ecology and role in aquaculture ponds. -
Representatives of the Prokaryotic (Chapter 12) and Archaeal (Chapter 13) Domains (Bergey's Manual of Determinative Bacteriology
Representatives of the Prokaryotic (Chapter 12) and Archaeal (Chapter 13) Domains (Bergey's Manual of Determinative Bacteriology: Kingdom: Procaryotae (9th Edition) XIII Kingdoms p. 351-471 Sectn. Group of Bacteria Subdivisions(s) Brock Text Examples of Genera Gram Stain Morphology (plus distinguishing characteristics) Important Features Phototrophic bacteria Chromatiaceae 356 Purple sulfur bacteria Gram Anoxygenic photosynthesis Bacterial chl. a and b Purple nonsulfur bacteria; photoorganotrophic for reduced nucleotides; oxidize 12.2 Anaerobic (Chromatiun; Allochromatium) Negative Spheres, rods, spirals (S inside or outside)) H2S as electron donor for CO2 anaerobic photosynthesis for ATP Purple Sulfur Bacteria Anoxic - develop well in meromictic lakes - layers - fresh S inside the cells except for Ectothiorhodospira 354 Table 12.2 p.354 above sulfate layers - Figs. 12.4, 12.5 Major membrane structures Fig.12..3 -- light required. Purple Non-Sulfur Rhodospirillales 358 Rhodospirillum, Rhodobacter Gram Diverse morphology from rods (Rhodopseudomonas) to Anoxygenic photosynthesis Bacteria Table 12.3 p. 354, 606 Rhodopseudomonas Negative spirals Fig. 12.6 H2, H2S or S serve as H donor for reduction of CO2; 358 82-83 Photoheterotrophy - light as energy source but also directly use organics 12.3 Nitrifying Bacteria Nitrobacteraceae Nitrosomonas Gram Wide spread , Diverse (rods, cocci, spirals); Aerobic Obligate chemolithotroph (inorganic eN’ donors) 6 Chemolithotrophic (nitrifying bacteria) 361 Nitrosococcus oceani - Fig.12.7 negative ! ammonia [O] = nitrosofyers - (NH3 NO2) Note major membranes Fig. 12,7) 6 359 bacteria Inorganic electron (Table 12.4) Nitrobacterwinograskii - Fig.12.8 ! nitrite [O]; = nitrifyers ;(NO2 NO3) Soil charge changes from positive to negative donors Energy generation is small Difficult to see growth. - Use of silica gel. -
Wastewater Structure of Nitrifying Bacteria from Concentrations on The
Effects of pH and Oxygen and Ammonium Concentrations on the Community Structure of Nitrifying Bacteria from Wastewater Alenka Princic, Ivan Mahne, France Megusar, Eldor A. Paul and James M. Tiedje Appl. Environ. Microbiol. 1998, 64(10):3584. Downloaded from Updated information and services can be found at: http://aem.asm.org/content/64/10/3584 http://aem.asm.org/ These include: REFERENCES This article cites 18 articles, 8 of which can be accessed free at: http://aem.asm.org/content/64/10/3584#ref-list-1 CONTENT ALERTS Receive: RSS Feeds, eTOCs, free email alerts (when new articles cite this article), more» on March 17, 2014 by COLARADO STATE UNIV Information about commercial reprint orders: http://journals.asm.org/site/misc/reprints.xhtml To subscribe to to another ASM Journal go to: http://journals.asm.org/site/subscriptions/ APPLIED AND ENVIRONMENTAL MICROBIOLOGY, Oct. 1998, p. 3584–3590 Vol. 64, No. 10 0099-2240/98/$04.0010 Copyright © 1998, American Society for Microbiology. All Rights Reserved. Effects of pH and Oxygen and Ammonium Concentrations on the Community Structure of Nitrifying Bacteria from Wastewater ALENKA PRINCˇICˇ,1,2* IVAN MAHNE,1 FRANCE MEGUSˇAR,1 ELDOR A. PAUL,2 2 AND JAMES M. TIEDJE 1 Biotechnical Faculty, University of Ljubljana, Biology Center, 1000 Ljubljana, Slovenia, Downloaded from and Center for Microbial Ecology, Michigan State University, East Lansing, Michigan 48824-13252 Received 13 February 1998/Accepted 29 June 1998 Shifts in nitrifying community structure and function in response to different ammonium concentrations (50, 500, 1,000, and 3,000 mg of N liter21), pH values (pH 6.0, 7.0, and 8.2), and oxygen concentrations (1, 7, and 21%) were studied in experimental reactors inoculated with nitrifying bacteria from a wastewater treatment plant. -
Food Waste Composting and Microbial Community Structure Profiling
processes Review Food Waste Composting and Microbial Community Structure Profiling Kishneth Palaniveloo 1,* , Muhammad Azri Amran 1, Nur Azeyanti Norhashim 1 , Nuradilla Mohamad-Fauzi 1,2, Fang Peng-Hui 3, Low Hui-Wen 3, Yap Kai-Lin 3, Looi Jiale 3, Melissa Goh Chian-Yee 3, Lai Jing-Yi 3, Baskaran Gunasekaran 3,* and Shariza Abdul Razak 4,* 1 Institute of Ocean and Earth Sciences, Institute for Advanced Studies Building, University of Malaya, Wilayah Persekutuan Kuala Lumpur 50603, Malaysia; [email protected] (M.A.A.); [email protected] (N.A.N.) 2 Institute of Biological Sciences, Faculty of Science, University of Malaya, Wilayah Persekutuan Kuala Lumpur 50603, Malaysia; [email protected] 3 Faculty of Applied Science, UCSI University (South Wing), Cheras, Wilayah Persekutuan Kuala Lumpur 56000, Malaysia; [email protected] (F.P.-H.); [email protected] (L.H.-W.); [email protected] (Y.K.-L.); [email protected] (L.J.); [email protected] (M.G.C.-Y.); [email protected] (L.J.-Y.) 4 Nutrition and Dietetics Program, School of Health Sciences, Health Campus, Universiti Sains Malaysia, Kubang Kerian 16150, Kelantan, Malaysia * Correspondence: [email protected] (K.P.); [email protected] (B.G.); [email protected] (S.A.R.); Tel.: +60-3-7967-4640 (K.P.); +60-16-323-4159 (B.G.); +60-19-964-4043 (S.A.R.) Received: 20 May 2020; Accepted: 16 June 2020; Published: 22 June 2020 Abstract: Over the last decade, food waste has been one of the major issues globally as it brings a negative impact on the environment and health. -
Nutrient Control Design Manual: State of Technology Review Report,” Were
United States Office of Research and EPA/600/R‐09/012 Environmental Protection Development January 2009 Agency Washington, DC 20460 Nutrient Control Design Manual State of Technology Review Report EPA/600/R‐09/012 January 2009 Nutrient Control Design Manual State of Technology Review Report by The Cadmus Group, Inc 57 Water Street Watertown, MA 02472 Scientific, Technical, Research, Engineering, and Modeling Support (STREAMS) Task Order 68 Contract No. EP‐C‐05‐058 George T. Moore, Task Order Manager United States Environmental Protection Agency Office of Research and Development / National Risk Management Research Laboratory 26 West Martin Luther King Drive, Mail Code 445 Cincinnati, Ohio, 45268 Notice This document was prepared by The Cadmus Group, Inc. (Cadmus) under EPA Contract No. EP‐C‐ 05‐058, Task Order 68. The Cadmus Team was lead by Patricia Hertzler and Laura Dufresne with Senior Advisors Clifford Randall, Emeritus Professor of Civil and Environmental Engineering at Virginia Tech and Director of the Occoquan Watershed Monitoring Program; James Barnard, Global Practice and Technology Leader at Black & Veatch; David Stensel, Professor of Civil and Environmental Engineering at the University of Washington; and Jeanette Brown, Executive Director of the Stamford Water Pollution Control Authority and Adjunct Professor of Environmental Engineering at Manhattan College. Disclaimer The views expressed in this document are those of the individual authors and do not necessarily, reflect the views and policies of the U.S. Environmental Protection Agency (EPA). Mention of trade names or commercial products does not constitute endorsement or recommendation for use. This document has been reviewed in accordance with EPA’s peer and administrative review policies and approved for publication. -
Effects of Phosphorus on Nitrification Process in a Fertile Soil Amended
agriculture Article Effects of Phosphorus on Nitrification Process in a Fertile Soil Amended with Urea Jianfeng Ning 1,2,*, Yuji Arai 2 , Jian Shen 1, Ronghui Wang 1 and Shaoying Ai 1,* 1 Institute of Agricultural Resources and Environment, Guangdong Academy of Agricultural Sciences, Key Laboratory of Plant Nutrition and Fertilizer in South Region, Ministry of Agriculture and Rural Affairs, Guangdong Key Laboratory of Nutrient Cycling and Farmland Conservation, Guangzhou 510640, China; [email protected] (J.S.); [email protected] (R.W.) 2 Department of Natural Resources and Environmental Sciences, University of Illinois at Urbana-Champaign, Urbana, IL 61801, USA; [email protected] * Correspondence: [email protected] (J.N.); [email protected] (S.A.) Abstract: While the effects of carbon on soil nitrogen (N) cycle have been extensively studied, it is not clearly understood how co-existing macronutrients, such as phosphorus (P), affect the N cycle in agroecosystems. In this study, P amendment effects on nitrification in a fertile agricultural soil were investigated under a typical N-P amendment rate. In a laboratory incubation study, soils were amended with urea, monopotassium phosphate and a mixture of urea and monopotassium phosphate at the same rate. In soils that received no amendments (control), P only, urea only, and urea plus P amendment, nitrification occurred within the first five days, with an average net nitrification rate of 5.30, 5.77, 16.66 and 9.00 mg N kg−1d−1, respectively. Interestingly, nitrification in urea-treated soils was retarded by P addition where a N:P ratio seemed to be a key factor impeding nitrification. -
Nitrifying Bacteria
® AWT-1AQUARIUM WATER TREATMENT Nitrifying bacteria. 1 WHAT IS IT? AWT-1® It is a solution that contains 9 species of nitrifying bacteria respon- sible for eliminating the ammonia and nitrites present in the water of aqua- riums and ponds. USES AND APPLICATIONS PONDS EXHIBITION, QUARANTINE OR BREEDING FRESH OR TANKS SALT WATER AQUARIUMS 2 LIVENTIA.NET HOW DOES IT WORK? The bacterial AWT-1® complex acts directly on the nitrogen Nitrates accumulate slowly over time and are much less toxic cycle, mainly in converting ammonia to nitrite then nitrate. to the animals. Nitrosomones bacteria feed on inorganic compounds with AWT-1® allows an adequate balance of these microorganisms ammonia as their main source of energy, these bacteria in to achieve the establishment of the nitrogen cycle. turn produce nitrite (NO2). CYCLE OF A NEW TANK (NUMBERS ARE ILLUSTRATIVE) 50 amonia nitrite 40 nitrate 30 TOTAL NITROGEN WATER CHANGE 20 NITROGEN (mg/l) 10 0 0 10 20 30 40 50 time (days) 3 NITROSOMONAS BACTERIA Facultative bacteria reduce 4 LIVENTIA.NET WHAT ARE THE BENEFITS? • Eliminates ammonia and nitrites present • Grown when ordered to insure the greatest bacterial • Generates a more efficient operation of bio-filters viability and longest shelf life. • Reduces water change • Custom made for fresh, brackish or salt water. • Reduces chemical and biological demands for oxygen • Extremely concentrated to insure quick reduction of • Reduces suspended and dissolved solids ammonia and nitrite • Not harmful to aquatic life • Can be custom made for unique environments or • Can be used in fresh or salt water applications. • One application • Complementary blend of Nitrifying bacteria used to seed, control build-up of ammonia and nitrite in aquariums, ponds and aquaculture operations. -
High Functional Diversity Among Nitrospira Populations That Dominate Rotating Biological Contactor Microbial Communities in a Municipal Wastewater Treatment Plant
The ISME Journal (2020) 14:1857–1872 https://doi.org/10.1038/s41396-020-0650-2 ARTICLE High functional diversity among Nitrospira populations that dominate rotating biological contactor microbial communities in a municipal wastewater treatment plant 1 1 1 1 1 2 Emilie Spasov ● Jackson M. Tsuji ● Laura A. Hug ● Andrew C. Doxey ● Laura A. Sauder ● Wayne J. Parker ● Josh D. Neufeld 1 Received: 18 October 2019 / Revised: 3 March 2020 / Accepted: 30 March 2020 / Published online: 24 April 2020 © The Author(s) 2020. This article is published with open access Abstract Nitrification, the oxidation of ammonia to nitrate via nitrite, is an important process in municipal wastewater treatment plants (WWTPs). Members of the Nitrospira genus that contribute to complete ammonia oxidation (comammox) have only recently been discovered and their relevance to engineered water treatment systems is poorly understood. This study investigated distributions of Nitrospira, ammonia-oxidizing archaea (AOA), and ammonia-oxidizing bacteria (AOB) in biofilm samples collected from tertiary rotating biological contactors (RBCs) of a municipal WWTP in Guelph, Ontario, 1234567890();,: 1234567890();,: Canada. Using quantitative PCR (qPCR), 16S rRNA gene sequencing, and metagenomics, our results demonstrate that Nitrospira species strongly dominate RBC biofilm samples and that comammox Nitrospira outnumber all other nitrifiers. Genome bins recovered from assembled metagenomes reveal multiple populations of comammox Nitrospira with distinct spatial and temporal distributions, including several taxa that are distinct from previously characterized Nitrospira members. Diverse functional profiles imply a high level of niche heterogeneity among comammox Nitrospira, in contrast to the sole detected AOA representative that was previously cultivated and characterized from the same RBC biofilm.