A Common East Asian-Speci C ALDH2 Mutation Causes
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Deficiency of Skeletal Muscle Succinate Dehydrogenase and Aconitase
Deficiency of skeletal muscle succinate dehydrogenase and aconitase. Pathophysiology of exercise in a novel human muscle oxidative defect. R G Haller, … , K Ayyad, C G Blomqvist J Clin Invest. 1991;88(4):1197-1206. https://doi.org/10.1172/JCI115422. Research Article We evaluated a 22-yr-old Swedish man with lifelong exercise intolerance marked by premature exertional muscle fatigue, dyspnea, and cardiac palpitations with superimposed episodes lasting days to weeks of increased muscle fatigability and weakness associated with painful muscle swelling and pigmenturia. Cycle exercise testing revealed low maximal oxygen uptake (12 ml/min per kg; healthy sedentary men = 39 +/- 5) with exaggerated increases in venous lactate and pyruvate in relation to oxygen uptake (VO2) but low lactate/pyruvate ratios in maximal exercise. The severe oxidative limitation was characterized by impaired muscle oxygen extraction indicated by subnormal systemic arteriovenous oxygen difference (a- v O2 diff) in maximal exercise (patient = 4.0 ml/dl, normal men = 16.7 +/- 2.1) despite normal oxygen carrying capacity and Hgb-O2 P50. In contrast maximal oxygen delivery (cardiac output, Q) was high compared to sedentary healthy men (Qmax, patient = 303 ml/min per kg, normal men 238 +/- 36) and the slope of increase in Q relative to VO2 (i.e., delta Q/delta VO2) from rest to exercise was exaggerated (delta Q/delta VO2, patient = 29, normal men = 4.7 +/- 0.6) indicating uncoupling of the normal approximately 1:1 relationship between oxygen delivery and utilization in dynamic exercise. Studies of isolated skeletal muscle mitochondria in our patient revealed markedly impaired succinate oxidation with normal glutamate oxidation implying a metabolic defect at […] Find the latest version: https://jci.me/115422/pdf Deficiency of Skeletal Muscle Succinate Dehydrogenase and Aconitase Pathophysiology of Exercise in a Novel Human Muscle Oxidative Defect Ronald G. -
Mitochondrial Supercomplex Assembly Promotes Breast and Endometrial Tumorigenesis by Metabolic Alterations and Enhanced Hypoxia Tolerance
ARTICLE https://doi.org/10.1038/s41467-019-12124-6 OPEN Mitochondrial supercomplex assembly promotes breast and endometrial tumorigenesis by metabolic alterations and enhanced hypoxia tolerance Kazuhiro Ikeda1, Kuniko Horie-Inoue1, Takashi Suzuki2, Rutsuko Hobo1,3, Norie Nakasato1,3, Satoru Takeda3,4 & Satoshi Inoue 1,5 1234567890():,; Recent advance in cancer research sheds light on the contribution of mitochondrial respiration in tumorigenesis, as they efficiently produce ATP and oncogenic metabolites that will facilitate cancer cell growth. Here we show that a stabilizing factor for mitochondrial supercomplex assembly, COX7RP/COX7A2L/SCAF1, is abundantly expressed in clinical breast and endometrial cancers. Moreover, COX7RP overexpression associates with prog- nosis of breast cancer patients. We demonstrate that COX7RP overexpression in breast and endometrial cancer cells promotes in vitro and in vivo growth, stabilizes mitochondrial supercomplex assembly even in hypoxic states, and increases hypoxia tolerance. Metabo- lomic analyses reveal that COX7RP overexpression modulates the metabolic profile of cancer cells, particularly the steady-state levels of tricarboxylic acid cycle intermediates. Notably, silencing of each subunit of the 2-oxoglutarate dehydrogenase complex decreases the COX7RP-stimulated cancer cell growth. Our results indicate that COX7RP is a growth- regulatory factor for breast and endometrial cancer cells by regulating metabolic pathways and energy production. 1 Division of Gene Regulation and Signal Transduction, Research Center for Genomic Medicine, Saitama Medical University, 1397-1 Yamane, Hidaka-shi, Saitama 350-1241, Japan. 2 Departments of Pathology and Histotechnology, Tohoku University Graduate School of Medicine, 2-1 Seiryo-machi, Aoba-ku, Sendai 980-8575, Japan. 3 Department of Obstetrics and Gynecology, Saitama Medical Center, Saitama Medical University, 1981, Tsujido, Kamoda, Kawagoe-shi, Saitama 350-8550, Japan. -
Analyzing the Potential Biological Determinants of Autism Spectrum Disorders: from Neuroinflammation to Kynurenines Pathway
Preprints (www.preprints.org) | NOT PEER-REVIEWED | Posted: 19 July 2020 doi:10.20944/preprints202007.0425.v1 Peer-reviewed version available at Brain Sci. 2020, 10, 631; doi:10.3390/brainsci10090631 Review Analyzing the potential biological determinants of Autism Spectrum Disorders: from Neuroinflammation to Kynurenines Pathway Rosa Savino1, Marco Carotenuto2, A. Nunzia Polito1, *, Sofia Di Noia1, Marzia Albenzio6,Alessia Scarinci3, Antonio Ambrosi4, Francesco Sessa5, Nicola Tartaglia4 and Giovanni Messina5 1 Department of Woman and Child, Neuropsychiatry for Child and Adolescent Unit, General Hospital “Riuniti” of Foggia, 71122 Foggia, Italy. [email protected] 2Department of Mental Health, Physical and Preventive Medicine, Clinic of Child and Adolescent Neuropsychiatry, Università degli Studi della Campania "Luigi Vanvitelli", 81100 Caserta, Italy. [email protected] 3Department of Education Sciences, Psychology and Communication, University of Bari, 70121 Bari, Italy. [email protected] 4Department of Medical and Surgical Sciences, University of Foggia, Viale Pinto, 71122, Foggia, Italy. [email protected] 5Department of Clinical and Experimental Medicine, University of Foggia, 71122 Foggia, Italy. [email protected] 6Department of the Sciences of Agriculture, Food and Environment, University of Foggia, Via Napoli, 25, 71100 Foggia, Italy. [email protected] * Correspondence: [email protected], tel: 0881732364. © 2020 by the author(s). Distributed under a Creative Commons CC BY license. Preprints (www.preprints.org) | NOT PEER-REVIEWED | Posted: 19 July 2020 doi:10.20944/preprints202007.0425.v1 Peer-reviewed version available at Brain Sci. 2020, 10, 631; doi:10.3390/brainsci10090631 2 of 32 Abstract: Autism Spectrum Disorder etiopathogenesis is still unclear and no effective preventive and treatment measures have been identified. -
Structure of the Intact 14-Subunit Human Cytochrome C Oxidase
www.nature.com/cr www.cell-research.com ARTICLE Structure of the intact 14-subunit human cytochrome c oxidase Shuai Zong 1, Meng Wu1, Jinke Gu1, Tianya Liu1, Runyu Guo1 and Maojun Yang1,2 Respiration is one of the most basic features of living organisms, and the electron transport chain complexes are probably the most complicated protein system in mitochondria. Complex-IV is the terminal enzyme of the electron transport chain, existing either as randomly scattered complexes or as a component of supercomplexes. NDUFA4 was previously assumed as a subunit of complex-I, but recent biochemical data suggested it may be a subunit of complex-IV. However, no structural evidence supporting this notion was available till now. Here we obtained the 3.3 Å resolution structure of complex-IV derived from the human supercomplex I1III2IV1 and assigned the NDUFA4 subunit into complex-IV. Intriguingly, NDUFA4 lies exactly at the dimeric interface observed in previously reported crystal structures of complex-IV homodimer which would preclude complex- IV dimerization. Combining previous structural and biochemical data shown by us and other groups, we propose that the intact complex-IV is a monomer containing 14 subunits. Cell Research (2018) 28:1026–1034; https://doi.org/10.1038/s41422-018-0071-1 INTRODUCTION states under physiological conditions, either being assembled into Mitochondria are critical to many cellular activities. Respiration is supercomplexes or freely scattered on mitochondrial inner the central function of mitochondria, and is exquisitely regulated membrane.36 NDUFA4 was originally considered as a subunit of in multiple ways in response to varying cell conditions.1–3 The Complex-I37 but was proposed to belong to Complex-IV recently.38 assembly of respiratory chain complexes, Complex I–IV (CI, NADH: However, the precise location of NDUFA4 in CIV remains unknown, ubiquinone oxidoreductase; CII, succinate:ubiquinone oxidoreduc- and thus this notion still lacks structural support. -
Function and Structure of Complex Ii of The
Annu. Rev. Biochem. 2003. 72:77–109 doi: 10.1146/annurev.biochem.72.121801.161700 FUNCTION AND STRUCTURE OF COMPLEX II * OF THE RESPIRATORY CHAIN Gary Cecchini Molecular Biology Division, Veterans Administration Medical Center, San Francisco, California 94121, and Department of Biochemistry and Biophysics, University of California, San Francisco, California 94143; email: [email protected] Key Words succinate dehydrogenase, fumarate reductase, quinone oxidoreductase, reactive oxygen species, respiratory chain f Abstract Complex II is the only membrane-bound component of the Krebs cycle and in addition functions as a member of the electron transport chain in mitochondria and in many bacteria. A recent X-ray structural solution of members of the complex II family of proteins has provided important insights into their function. One feature of the complex II structures is a linear electron transport chain that extends from the flavin and iron-sulfur redox cofactors in the membrane extrinsic domain to the quinone and b heme cofactors in the membrane domain. Exciting recent developments in relation to disease in humans and the formation of reactive oxygen species by complex II point to its overall importance in cellular physiology. CONTENTS OVERVIEW OF MEMBRANE-BOUND RESPIRATORY CHAIN .......... 78 COMPLEX II .......................................... 80 OVERALL STRUCTURE OF COMPLEX II ....................... 83 FLAVOPROTEIN SUBUNIT AND FORMATION OF THE COVALENT FAD LINKAGE............................................ 87 CATALYSIS IN COMPLEX II................................ 91 IRON-SULFUR CLUSTERS OF COMPLEX II AND THE ELECTRON TRANS- FER PATHWAY........................................ 94 MEMBRANE DOMAIN OF COMPLEX II ........................ 95 ROLE OF THE b HEME IN COMPLEX II ........................ 99 RELATION OF COMPLEX II TO DISEASE AND REACTIVE OXYGEN SPECIES ............................................100 CONCLUDING REMARKS .................................104 *The U.S. -
Thiol Switches in Mitochondria: Operation and Physiological Relevance
Biol. Chem. 2015; aop Review Jan Riemer * , Markus Schwarzl ä nder * , Marcus Conrad * and Johannes M. Herrmann * Thiol switches in mitochondria: operation and physiological relevance Abstract : Mitochondria are a major source of reactive Introduction – mitochondria oxygen species (ROS) in the cell, particularly of super- oxide and hydrogen peroxide. A number of dedicated contain two distinct redox networks enzymes regulate the conversion and consumption of superoxide and hydrogen peroxide in the intermem- Mitochondria are essential organelles of eukaryotic cells. brane space and the matrix of mitochondria. Neverthe- They produce not only the bulk of cellular energy in the less, hydrogen peroxide can also interact with many other form of ATP, but they also generate numerous important mitochondrial enzymes, particularly those with reactive metabolites and cofactors, and they serve as critical sign- cysteine residues, modulating their reactivity in accord- aling stations that, for example, integrate cellular signals ance with changes in redox conditions. In this review we to initiate apoptosis. In turn, mitochondria also commu- will describe the general redox systems in mitochondria nicate their metabolic and fitness state to the remainder of animals, fungi and plants and discuss potential target of the cell to trigger cellular adaptation processes. proteins that were proposed to contain regulatory thiol Mitochondria contain two distinct aqueous sub- switches. compartments, the intermembrane space (IMS) and the matrix. Both subcompartments differ strongly with Keywords: glutathione; hydrogen peroxide; mitochon- respect to their biological activity, their protein composi- dria; NADPH; reactive oxygen species; redox regulation; tion ( Herrmann and Riemer, 2010 ) as well as their redox ROS; signaling; thiol switch. properties. -
Biological Application and Disease of Oxidoreductase Enzymes Mezgebu Legesse Habte and Etsegenet Assefa Beyene
Chapter Biological Application and Disease of Oxidoreductase Enzymes Mezgebu Legesse Habte and Etsegenet Assefa Beyene Abstract In biochemistry, oxidoreductase is a large group of enzymes that are involved in redox reaction in living organisms and in the laboratory. Oxidoreductase enzymes catalyze reaction involving oxygen insertion, hydride transfer, proton extraction, and other essential steps. There are a number of metabolic pathways like glycolysis, Krebs cycle, electron transport chain and oxidative phosphorylation, drug transfor- mation and detoxification in liver, photosynthesis in chloroplast of plants, etc. that require the direct involvements of oxidoreductase enzymes. In addition, degrada- tion of old and unnecessary endogenous biomolecules is catalyzed by a family of oxidoreductase enzymes, e.g., xanthine oxidoreductase. Oxidoreductase enzymes use NAD, FAD, or NADP as a cofactor and their efficiency, specificity, good biode- gradability, and being studied well make it fit well for industrial applications. In the near future, oxidoreductase may be utilized as the best biocatalyst in pharmaceuti- cal, food processing, and other industries. Oxidoreductase play a significant role in the field of disease diagnosis, prognosis, and treatment. By analyzing the activities of enzymes and changes of certain substances in the body fluids, the number of disease conditions can be diagnosed. Disorders resulting from deficiency (quantita- tive and qualitative) and excess of oxidoreductase, which may contribute to the metabolic abnormalities and decreased normal performance of life, are becoming common. Keywords: biocatalyst, biological application, disease, metabolism, mutation, oxidoreductase 1. Introduction Oxidoreductases, which includes oxidase, oxygenase, peroxidase, dehydroge- nase, and others, are enzymes that catalyze redox reaction in living organisms and in the laboratory [1]. -
Mitochondrial Probe Methyltriphenylphosphonium (TPMP) Inhibits the Krebs Cycle Enzyme 2- Oxoglutarate Dehydrogenase
RESEARCH ARTICLE Mitochondrial Probe Methyltriphenylphosphonium (TPMP) Inhibits the Krebs Cycle Enzyme 2- Oxoglutarate Dehydrogenase Moustafa Elkalaf1,4, Petr Tůma2,4, Martin Weiszenstein3,4, Jan Polák3,4, Jan Trnka1,2,4* 1 Laboratory for Metabolism and Bioenergetics, Third Faculty of Medicine, Charles University, Prague, Czech Republic, 2 Department of Biochemistry, Cell and Molecular Biology, Third Faculty of Medicine, a11111 Charles University, Prague, Czech Republic, 3 Department of Sport Medicine, Third Faculty of Medicine, Charles University, Prague, Czech Republic, 4 Centre for Research on Diabetes, Metabolism and Nutrition, Third Faculty of Medicine, Charles University, Prague, Czech Republic * [email protected] OPEN ACCESS Abstract ů Citation: Elkalaf M, T ma P, Weiszenstein M, Polák Methyltriphenylphosphonium (TPMP) salts have been widely used to measure the mito- J, Trnka J (2016) Mitochondrial Probe + Methyltriphenylphosphonium (TPMP) Inhibits the chondrial membrane potential and the triphenylphosphonium (TPP ) moiety has been Krebs Cycle Enzyme 2-Oxoglutarate attached to many bioactive compounds including antioxidants to target them into mitochon- Dehydrogenase. PLoS ONE 11(8): e0161413. dria thanks to their high affinity to accumulate in the mitochondrial matrix. The adverse doi:10.1371/journal.pone.0161413 effects of these compounds on cellular metabolism have been insufficiently studied and are Editor: Janine Santos, National Institute of still poorly understood. Micromolar concentrations of TPMP cause a progressive -
Lecture 9: Citric Acid Cycle/Fatty Acid Catabolism
Metabolism Lecture 9 — CITRIC ACID CYCLE/FATTY ACID CATABOLISM — Restricted for students enrolled in MCB102, UC Berkeley, Spring 2008 ONLY Bryan Krantz: University of California, Berkeley MCB 102, Spring 2008, Metabolism Lecture 9 Reading: Ch. 16 & 17 of Principles of Biochemistry, “The Citric Acid Cycle” & “Fatty Acid Catabolism.” Symmetric Citrate. The left and right half are the same, having mirror image acetyl groups (-CH2COOH). Radio-label Experiment. The Krebs Cycle was tested by 14C radio- labeling experiments. In 1941, 14C-Acetyl-CoA was used with normal oxaloacetate, labeling only the right side of drawing. But none of the label was released as CO2. Always the left carboxyl group is instead released as CO2, i.e., that from oxaloacetate. This was interpreted as proof that citrate is not in the 14 cycle at all the labels would have been scrambled, and half of the CO2 would have been C. Prochiral Citrate. In a two-minute thought experiment, Alexander Ogston in 1948 (Nature, 162: 963) argued that citrate has the potential to be treated as chiral. In chemistry, prochiral molecules can be converted from achiral to chiral in a single step. The trick is an asymmetric enzyme surface (i.e. aconitase) can act on citrate as through it were chiral. As a consequence the left and right acetyl groups are not treated equivalently. “On the contrary, it is possible that an asymmetric enzyme which attacks a symmetrical compound can distinguish between its identical groups.” Metabolism Lecture 9 — CITRIC ACID CYCLE/FATTY ACID CATABOLISM — Restricted for students enrolled in MCB102, UC Berkeley, Spring 2008 ONLY [STEP 4] α-Keto Glutarate Dehydrogenase. -
Title: Current Management of Succinate Dehydrogenase Deficient Gastrointestinal Stromal Tumors Authors
1 Title: Current Management of Succinate Dehydrogenase Deficient Gastrointestinal Stromal Tumors Authors: Pushpa Neppala1, Sudeep Banerjee2,3, Paul T. Fanta4,5, Mayra Yerba2, Kevin A. Porras1, Adam M. Burgoyne5, Jason K. Sicklick2,4 Affiliations: 1 UC San Diego School of Medicine, University of California, San Diego, La Jolla, California 2 Division of Surgical Oncology, Department of Surgery, UC San Diego Moores Cancer Center, University of California, San Diego, La Jolla, California 3 Department of Surgery, David Geffen School of Medicine at UCLA, Los Angeles, California 4 Center for Personalized Cancer Therapy, UC San Diego Moores Cancer Center, University of California, San Diego, La Jolla, California 5 Division of Hematology-Oncology, Department of Medicine, UC San Diego Moores Cancer Center, University of California, San Diego, La Jolla, California Corresponding Authors: Jason K. Sicklick, MD, Division of Surgical Oncology, Department of Surgery, UC San Diego Moores Cancer Center, University of California, San Diego, 3855 Health Sciences Drive, MC 0987, La Jolla, CA 92093-0987; Tel: 858-822-6173; Fax: 858-228-5153; Email: [email protected] Adam M. Burgoyne, MD, PhD, Division of Hematology-Oncology, Department of Medicine, UC San Diego Moores Cancer Center, University of California, San Diego, 3855 Health Sciences Drive, MC 0987, La Jolla, CA 92093-0987; Tel: 858-246-0674; Fax: (858) 246-0284 Email: [email protected] Financial Support: This work was supported by the Society for Surgery of the Alimentary Tract (SSAT) Mentored Research Award (S.B), UC San Diego GIST Research Fund (J.K.S.), NIH K08CA168999 (J.K.S.) and NIH R21CA192072 (J.K.S.). -
Structural and Functional Consequences of Succinate Dehydrogenase Subunit B Mutations
Kim, Rath, Tsang et al. Consequences of SDHB 22:3 387–397 Research mutations Structural and functional consequences of succinate dehydrogenase subunit B mutations E Kim1,*, E M Rath3,*, V H M Tsang1,2,*, A P Duff4, B G Robinson1,2, W B Church3, D E Benn1, T Dwight1 and R J Clifton-Bligh1,2 1Cancer Genetics, Kolling Institute of Medical Research, Royal North Shore Hospital, and University of Sydney, Sydney, New South Wales, Australia Correspondence 2Department of Endocrinology, Royal North Shore Hospital, Sydney, New South Wales, Australia should be addressed 3Faculty of Pharmacy, University of Sydney, Sydney, New South Wales, Australia to E Kim 4Australian Nuclear Science and Technology Organisation, Lucas Heights, New South Wales, Australia Email *(E Kim, E M Rath and V H M Tsang contributed equally to this work) [email protected] Abstract Mitochondrial dysfunction, due to mutations of the gene encoding succinate dehydro- Key Words genase (SDH), has been implicated in the development of adrenal phaeochromocytomas, " succinate dehydrogenase sympathetic and parasympathetic paragangliomas, renal cell carcinomas, gastrointestinal " SDHB stromal tumours and more recently pituitary tumours. Underlying mechanisms behind " phaeochromocytoma germline SDH subunit B (SDHB) mutations and their associated risk of disease are not clear. " paraganglioma To investigate genotype–phenotype correlation of SDH subunit B (SDHB) variants, a " functional consequences homology model for human SDH was developed from a crystallographic structure. SDHB Endocrine-Related Cancer mutations were mapped, and biochemical effects of these mutations were predicted in silico. Results of structural modelling indicated that many mutations within SDHB are predicted to cause either failure of functional SDHB expression (p.Arg27*, p.Arg90*, c.88delC and c.311delAinsGG), or disruption of the electron path (p.Cys101Tyr, p.Pro197Arg and p.Arg242His). -
Loss of SDHB Reprograms Energy Metabolisms and Inhibits High Fat Diet
bioRxiv preprint doi: https://doi.org/10.1101/259226; this version posted February 3, 2018. The copyright holder for this preprint (which was not certified by peer review) is the author/funder, who has granted bioRxiv a license to display the preprint in perpetuity. It is made available under aCC-BY-NC-ND 4.0 International license. Loss of SDHB reprograms energy metabolisms and inhibits high fat diet induced metabolic syndromes Chenglong Mu1, Biao Ma1, Chuanmei Zhang1, Guangfeng Geng1, Xinling Zhang1, Linbo Chen1, Meng Wang1, Jie Li1, Tian Zhao1, Hongcheng Cheng1, Qianping Zhang1, Kaili Ma1, Qian Luo1, Rui Chang1, Qiangqiang Liu1, Hao Wu2, Lei Liu2, Xiaohui Wang2, Jun Wang2, Yong Zhang3, Yungang Zhao3, Li Wen3, Quan Chen1,2*, Yushan Zhu1* 1State Key Laboratory of Medicinal Chemical Biology, Tianjin Key Laboratory of Protein Science, College of Life Sciences, Nankai University, Tianjin 300071, China. 2State Key Laboratory of Membrane Biology, Institute of Zoology, Chinese Academy of Sciences, Beijing 100101, China. 3Tianjin Key Laboratory of Exercise and Physiology and Sports Medicine, Tianjin University of Sport, Tianjin 300381, China. *Correspondence: [email protected] (QC), [email protected] (YZ) Running title: Complex II regulates energy metabolism (38) 1 bioRxiv preprint doi: https://doi.org/10.1101/259226; this version posted February 3, 2018. The copyright holder for this preprint (which was not certified by peer review) is the author/funder, who has granted bioRxiv a license to display the preprint in perpetuity. It is made available under aCC-BY-NC-ND 4.0 International license. Abstract Mitochondrial respiratory complex II utilizes succinate, key substrate of the Krebs cycle, for oxidative phosphorylation, which is essential for glucose metabolism.