“There's Something Fishy” the Nitrogen Cycle Science in the Real
Total Page:16
File Type:pdf, Size:1020Kb
Load more
Recommended publications
-
Nitrobacter As an Indicator of Toxicity in Wastewater
State Water Survey Division WATER QUALITY SECTION AT Illinois Department of PEORIA, ILLINOIS Energy and Natural Resources SWS Contract Report 326 NITROBACTER AS AN INDICATOR OF TOXICITY IN WASTEWATER by Wuncheng Wang and Paula Reed Prepared for and funded by the Illinois Department of Energy and Natural Resources September 1983 CONTENTS PAGE Abstract 1 Introduction 1 Scope of study 3 Acknowledgments 3 Literature review 3 Microbial nitrification 3 Influence of toxicants on nitrification 5 Materials and methods 10 Culture 10 Methods 11 Results 12 Preliminary tests 13 Metal toxicity 13 Organic compounds toxicity 16 Time effect 22 Discussion 22 References 27 NITROBACTER AS AN INDICATOR OF TOXICITY IN WASTEWATER by Wuncheng Wang and Paula Reed ABSTRACT This report presents the results of a study of the use of Nitrobacter as an indicator of toxicity. Nitrobacter are strictly aerobic, autotrophic, and slow growing bacteria. Because they convert nitrite to nitrate, the effects that toxins have on them can be detected easily by monitoring changes in their nitrite consumption rate. The bacterial cultures were obtained from two sources — the Peoria and Princeton (Illinois) wastewater treatment plants — and tests were con• ducted to determine the effects on the cultures of inorganic ions and organic compounds. The inorganic ions included cadmium, copper, lead, and nickel. The organic compounds were phenol, chlorophenol (three derivatives), dichlo- rophenol (two derivatives), and trichlorophenol. The bioassay procedure is relatively simple and the results are repro• ducible . The effects of these chemical compounds on Nitrobacter were not dramatic. For example, of the compounds tested, 2,4,6-trichlorophenol was the most toxic to Nitrobacter. -
Human Alteration of the Global Nitrogen Cycle
What is Nitrogen? Human Alteration of the Nitrogen is the most abundant element in Global Nitrogen Cycle the Earth’s atmosphere. Nitrogen makes up 78% of the troposphere. Nitrogen cannot be absorbed directly by the plants and animals until it is converted into compounds they can use. This process is called the Nitrogen Cycle. Heather McGraw, Mandy Williams, Suzanne Heinzel, and Cristen Whorl, Give SIUE Permission to Put Our Presentation on E-reserve at Lovejoy Library. The Nitrogen Cycle How does the nitrogen cycle work? Step 1- Nitrogen Fixation- Special bacteria convert the nitrogen gas (N2 ) to ammonia (NH3) which the plants can use. Step 2- Nitrification- Nitrification is the process which converts the ammonia into nitrite ions which the plants can take in as nutrients. Step 3- Ammonification- After all of the living organisms have used the nitrogen, decomposer bacteria convert the nitrogen-rich waste compounds into simpler ones. Step 4- Denitrification- Denitrification is the final step in which other bacteria convert the simple nitrogen compounds back into nitrogen gas (N2 ), which is then released back into the atmosphere to begin the cycle again. How does human intervention affect the nitrogen cycle? Nitric Oxide (NO) is released into the atmosphere when any type of fuel is burned. This includes byproducts of internal combustion engines. Production and Use of Nitrous Oxide (N2O) is released into the atmosphere through Nitrogen Fertilizers bacteria in livestock waste and commercial fertilizers applied to the soil. Removing nitrogen from the Earth’s crust and soil when we mine nitrogen-rich mineral deposits. Discharge of municipal sewage adds nitrogen compounds to aquatic ecosystems which disrupts the ecosystem and kills fish. -
Nitrogen Metabolism in Phytoplankton - Y
MARINE ECOLOGY – Nitrogen Metabolism in Phytoplankton - Y. Collos, J. A. Berges NITROGEN METABOLISM IN PHYTOPLANKTON Y. Collos Laboratoire d'Hydrobiologie CNRS, Université Montpellier II, France J. A. Berges School of Biology and Biochemistry, Queen's University of Belfast, UK Keywords: uptake, reduction, excretion, proteases, chlorophyllases, cell death. Contents 1. Introduction 2. Availability and use of different forms of nitrogen 2.1 Nitrate 2.2. Nitrite 2.3. Ammonium 2.4. Molecular N2 2.5. Dissolved organic N (DON) 2.6. Particulate nitrogen (PN) 3. Assimilation pathways 4. Accumulation and storage 4.1. Inorganic compounds 4.2. Organic compounds 5. Nutrient classification and preferences 6. Plasticity in cell composition 7. Overflow mechanisms: excretion and release processes 8. Recycling of N within the cell 9. Degradation pathways 9.1. Requirements for and roles of degradation 9.2. How is degradation accomplished? 9.3. Variation in degradation 9.4. Pathogenesis and Cell Death 10. From uptake to growth: time-lag phenomena 11. Relationships with carbon metabolism 12. Future directions AcknowledgementsUNESCO – EOLSS Glossary Bibliography SAMPLE CHAPTERS Biographical Sketches Summary Phytoplankton use a large variety of nitrogen compounds and are extremely well adapted to fluctuating environmental conditions by a high capacity to change their chemical composition.Degradation and turnover of nitrogen within phytoplankton is essential for many processes including normal cell maintenance, acclimations to changes in light, salinity, and nutrients, and cell defence against pathogens. The ©Encyclopedia of Life Support Systems (EOLSS) MARINE ECOLOGY – Nitrogen Metabolism in Phytoplankton - Y. Collos, J. A. Berges pathways by which N degradation is accomplished are very poorly understood, but based on work in higher plant species, protein degradation is likely to be of central importance. -
Human Alteration of the Global Nitrogen Cycle: Causes And
Published by the Ecological Society of America Number 1, Spring 1997 Causes andConsequences Human Alterationofthe Issues in EcologyGlobal NitrogenCycle: Photo by Nadine Cavender Issues in Ecology Number 1 Spring 1997 Human Alteration of the Global Nitrogen Cycle: Causes and Consequences SUMMARY Human activities are greatly increasing the amount of nitrogen cycling between the living world and the soil, water, and atmosphere. In fact, humans have already doubled the rate of nitrogen entering the land-based nitrogen cycle, and that rate is continuing to climb. This human-driven global change is having serious impacts on ecosystems around the world because nitrogen is essential to living organisms and its availability plays a crucial role in the organization and functioning of the worlds ecosystems. In many ecosystems on land and sea, the supply of nitrogen is a key factor controlling the nature and diversity of plant life, the population dynamics of both grazing animals and their predators, and vital ecologi- cal processes such as plant productivity and the cycling of carbon and soil minerals. This is true not only in wild or unmanaged systems but in most croplands and forestry plantations as well. Excessive nitrogen additions can pollute ecosystems and alter both their ecological functioning and the living communities they support. Most of the human activities responsible for the increase in global nitrogen are local in scale, from the production and use of nitrogen fertilizers to the burning of fossil fuels in automobiles, power generation plants, and industries. However, human activities have not only increased the supply but enhanced the global movement of various forms of nitrogen through air and water. -
Recycling of Vitamin B12 and NAD+ Within the Pdu Microcompartment of Salmonella Enterica Shouqiang Cheng Iowa State University
Iowa State University Capstones, Theses and Graduate Theses and Dissertations Dissertations 2010 Recycling of vitamin B12 and NAD+ within the Pdu microcompartment of Salmonella enterica Shouqiang Cheng Iowa State University Follow this and additional works at: https://lib.dr.iastate.edu/etd Part of the Biochemistry, Biophysics, and Structural Biology Commons Recommended Citation Cheng, Shouqiang, "Recycling of vitamin B12 and NAD+ within the Pdu microcompartment of Salmonella enterica" (2010). Graduate Theses and Dissertations. 11713. https://lib.dr.iastate.edu/etd/11713 This Dissertation is brought to you for free and open access by the Iowa State University Capstones, Theses and Dissertations at Iowa State University Digital Repository. It has been accepted for inclusion in Graduate Theses and Dissertations by an authorized administrator of Iowa State University Digital Repository. For more information, please contact [email protected]. + Recycling of vitamin B12 and NAD within the Pdu microcompartment of Salmonella enterica by Shouqiang Cheng A dissertation submitted to the graduate faculty in partial fulfillment of the requirements for the degree of DOCTOR OF PHILOSOPHY Major: Biochemistry Program of Study Committee: Thomas A. Bobik, Major Professor Alan DiSpirito Basil Nikolau Reuben Peters Gregory J. Phillips Iowa State University Ames, Iowa 2010 Copyright © Shouqiang Cheng, 2010. All rights reserved. ii Table of contents Abstract............................................................................................................................. -
Organic Matter Decomposition in Simulated Aquaculture Ponds Group Fish Culture and Fisheries Daily Supervisor(S) Dr
O rganic matter decomposition in simulated aquaculture ponds Beatriz Torres Beristain Promotor: Prof. Dr. J.A .J. V erreth H oogleraar in de V isteelt en V isserij W ageningen U niversiteit C o-promotor: Dr. M .C .J. V erdegem U niversitair docent bij the Leerstoelgroep V isteelt en V isserij W ageningen U niversiteit Samenstelling promotiecommissie: Prof. Dr. Y . A vnimelech Technion, Israel Institute of Technology Prof. Dr. Ir. H .J. Gijzen U N ESC O -IH E, Delf, N etherlands Prof. Dr. Ir. M . W .A . V erstegen W ageningen U niversiteit Prof. Dr. Ir. A .A . K oelmans W ageningen U niversiteit Dit onderzoek is uitgevoerd binnen de onderzoekschool W IA S O rganic matter decomposition in simulated aquaculture ponds Beatriz Torres Beristain Proefschrift Ter verkrijging van de graad van doctor O p gezag van de rector magnificus van W ageningen U niversiteit, Prof. Dr. Ir. L. Speelman, In het openbaar te verdedigen O p dinsdag 15 A pril 2005 des namiddags te half tw ee in de A ula Torres Beristain, B. O rganic matter decomposition in simulated aquaculture ponds PhD thesis, Fish C ulture and Fisheries Group, W ageningen Institute of A nimal Sciences. W ageningen U niversity, P.O . Box 338, 6700 A H W ageningen, The N etherlands. - W ith R ef. œW ith summary in Spanish, Dutch and English ISBN : 90-8504-170-8 A Domingo, Y olanda y A lejandro Table of contents C hapter 1 General introduction. 1 C hapter 2 R eview microbial ecology and role in aquaculture ponds. -
Carbon–Nitrogen Interactions in Idealized Simulations with JSBACH (Version 3.10)
Geosci. Model Dev., 10, 2009–2030, 2017 www.geosci-model-dev.net/10/2009/2017/ doi:10.5194/gmd-10-2009-2017 © Author(s) 2017. CC Attribution 3.0 License. Carbon–nitrogen interactions in idealized simulations with JSBACH (version 3.10) Daniel S. Goll1,a, Alexander J. Winkler2,3, Thomas Raddatz2, Ning Dong3,5, Ian Colin Prentice4,6, Philippe Ciais1, and Victor Brovkin2 1Le Laboratoire des Sciences du Climat et de l’Environnement, IPSL-LSCE CEA/CNRS/UVSQ Saclay, Gif sur Yvette, France 2Max Planck Institute for Meteorology, Hamburg, Germany 3International Max Planck Research School on Earth System Modeling, Hamburg, Germany 4Department of Biological Sciences, Macquarie University, North Ryde, NSW 2109, Australia 5Faculty of Agriculture and Environment, Department of Environmental Sciences, University of Sydney, NSW 2006, Australia 6AXA Chair in Biosphere and Climate Impacts, Department of Life Sciences, Imperial College London, Silwood Park Campus, Buckhurst Road, Ascot SL5 7PY, UK aformerly at: Max Planck Institute for Meteorology, Hamburg, Germany Correspondence to: Daniel S. Goll ([email protected]) Received: 17 December 2016 – Discussion started: 9 January 2017 Revised: 7 April 2017 – Accepted: 14 April 2017 – Published: 22 May 2017 Abstract. Recent advances in the representation of soil car- The strengths of the land carbon feedbacks of the re- −1 bon decomposition and carbon–nitrogen interactions imple- cent version of JSBACH, with βL D 0:61 Pgppm and γL D mented previously into separate versions of the land sur- −27:5 Pg ◦C−1, are 34 and 53 % less than the averages of face scheme JSBACH are here combined in a single version, CMIP5 models, although the CMIP5 version of JSBACH which is set to be used in the upcoming 6th phase of coupled simulated βL and γL, which are 59 and 42 % higher than model intercomparison project (CMIP6). -
Food Waste Composting and Microbial Community Structure Profiling
processes Review Food Waste Composting and Microbial Community Structure Profiling Kishneth Palaniveloo 1,* , Muhammad Azri Amran 1, Nur Azeyanti Norhashim 1 , Nuradilla Mohamad-Fauzi 1,2, Fang Peng-Hui 3, Low Hui-Wen 3, Yap Kai-Lin 3, Looi Jiale 3, Melissa Goh Chian-Yee 3, Lai Jing-Yi 3, Baskaran Gunasekaran 3,* and Shariza Abdul Razak 4,* 1 Institute of Ocean and Earth Sciences, Institute for Advanced Studies Building, University of Malaya, Wilayah Persekutuan Kuala Lumpur 50603, Malaysia; [email protected] (M.A.A.); [email protected] (N.A.N.) 2 Institute of Biological Sciences, Faculty of Science, University of Malaya, Wilayah Persekutuan Kuala Lumpur 50603, Malaysia; [email protected] 3 Faculty of Applied Science, UCSI University (South Wing), Cheras, Wilayah Persekutuan Kuala Lumpur 56000, Malaysia; [email protected] (F.P.-H.); [email protected] (L.H.-W.); [email protected] (Y.K.-L.); [email protected] (L.J.); [email protected] (M.G.C.-Y.); [email protected] (L.J.-Y.) 4 Nutrition and Dietetics Program, School of Health Sciences, Health Campus, Universiti Sains Malaysia, Kubang Kerian 16150, Kelantan, Malaysia * Correspondence: [email protected] (K.P.); [email protected] (B.G.); [email protected] (S.A.R.); Tel.: +60-3-7967-4640 (K.P.); +60-16-323-4159 (B.G.); +60-19-964-4043 (S.A.R.) Received: 20 May 2020; Accepted: 16 June 2020; Published: 22 June 2020 Abstract: Over the last decade, food waste has been one of the major issues globally as it brings a negative impact on the environment and health. -
Nutrient Control Design Manual: State of Technology Review Report,” Were
United States Office of Research and EPA/600/R‐09/012 Environmental Protection Development January 2009 Agency Washington, DC 20460 Nutrient Control Design Manual State of Technology Review Report EPA/600/R‐09/012 January 2009 Nutrient Control Design Manual State of Technology Review Report by The Cadmus Group, Inc 57 Water Street Watertown, MA 02472 Scientific, Technical, Research, Engineering, and Modeling Support (STREAMS) Task Order 68 Contract No. EP‐C‐05‐058 George T. Moore, Task Order Manager United States Environmental Protection Agency Office of Research and Development / National Risk Management Research Laboratory 26 West Martin Luther King Drive, Mail Code 445 Cincinnati, Ohio, 45268 Notice This document was prepared by The Cadmus Group, Inc. (Cadmus) under EPA Contract No. EP‐C‐ 05‐058, Task Order 68. The Cadmus Team was lead by Patricia Hertzler and Laura Dufresne with Senior Advisors Clifford Randall, Emeritus Professor of Civil and Environmental Engineering at Virginia Tech and Director of the Occoquan Watershed Monitoring Program; James Barnard, Global Practice and Technology Leader at Black & Veatch; David Stensel, Professor of Civil and Environmental Engineering at the University of Washington; and Jeanette Brown, Executive Director of the Stamford Water Pollution Control Authority and Adjunct Professor of Environmental Engineering at Manhattan College. Disclaimer The views expressed in this document are those of the individual authors and do not necessarily, reflect the views and policies of the U.S. Environmental Protection Agency (EPA). Mention of trade names or commercial products does not constitute endorsement or recommendation for use. This document has been reviewed in accordance with EPA’s peer and administrative review policies and approved for publication. -
Nitrogen Biogeochemistry of Aquaculture Ponds 1
Aquaculture 166Ž. 1998 181±212 Review Nitrogen biogeochemistry of aquaculture ponds 1 John A. Hargreaves Mississippi State UniÕersity, Department of Wildlife and Fisheries, Box 9690, Mississippi State, MS 39762, USA Accepted 6 June 1998 Abstract NitrogenŽ. N biogeochemistry of aquaculture ponds is dominated by biological transformations of N added to ponds in the form of inorganic or organic fertilizers and formulated feeds. Nitrogen application in excess of pond assimilatory capacity can lead to the deterioration of water quality through the accumulation of nitrogenous compoundsŽ. e.g., ammonia and nitrite with toxicity to fish or shrimp. Principal sources of ammonia include fish excretion and sediment flux derived from the mineralization of organic matter and molecular diffusion from reduced sediment, although cyanobacterial nitrogen fixation and atmospheric deposition are occasionally important. Principal sinks for ammonia include phytoplankton uptake and nitrification. The magnitude of losses by ammonia volatilization and ammonium fixation to cation exchange sites is minor, but unknown. Interactions between pond sediment and water are important regulators of N biogeo- chemistry. Sediment represents a source of ammonia and a sink for nitrite and nitrate. The large volume of reduced sediment suggests that the potential for N removal by denitrification is high, although the magnitude of N removal by this mechanism is low because nitrification and denitrification are tightly coupled in aquatic sediments and sediment nitrification is limited by the depth of sediment oxygen penetration. Nitrogen biogeochemistry of aquaculture ponds is affected by feeds and feeding practices, water exchange and circulation, aeration, pond depth and other management procedures. Opportunities for management of N biogeochemistry are limited and goals are based largely on the intensity of fish production. -
The Mechanical Quadrature Method for Linear And
OdokumaOdokuma and Akponah and Akponah 21 INTERNATIONAL JOURNAL OF NATURAL AND APPLIED SCIENCES (IJNAS), VOL. 2, NO. 2(2007); P. 21 – 31. 6 FIGS Response of nitrosomonas, nitrobacter and escherichia coli to drilling fluids L.O. Odokuma and E. Akponah ABSTRACT Inhibition of ammonia oxidation by Nitrosomonas, nitrite consumption by Nitrobacter and carbon IV oxide evolution by Escherithia coil were employed as indices to determine the effect of four drilling fluids (Paradril, IMCO-W, IMCO-O and Gel/KCL/polymer to these bacteria. The percent log survival of these bacteria when exposed to these fluids was also used as an index. Ammonia oxidation was monitored as nitrite accumulation. Both nitrite accumulation and nitrite consumption were determined by coupling of diazotised sulfanilic acid with -napthylethylene diaminedihydrochloride. Result revealed decreases in the percentage log survival with increasing concentration of the drilling fluids and increasing exposure period of the three bacteria. Nitrite accumulation in cultures containing Nitmsomonas decreased with increase in concentration and exposure time of the four fluids. Controls (containing Winogradsky Phase I with Nitrosomonas and no toxicants) revealed an increase in nitrite accumulation with increase in exposure time. Nitrite consumption in Nitmbacter containing cultures decreased with increase in concentration and exposure time to fluids. Controls (containing Winogradsky Phase II with Nitrobacter and no toxicants) showed a similar trend but the decrease was not as rapid. Carbon IV oxide evolution in cultures containing E. coil generally decreased with increase in concentration and exposure time to fluids. Controls (containing lactose broth with E. coli and no toxicant) revealed an increase in CO2 evolution with increase in exposure time. -
Biogeochemistry of Wetlands Nitrogen
Institute of Food and Agricultural Sciences (IFAS) Biogeochemistry of Wetlands SiScience an dAd App litilications NITROGEN Wetland Biogeochemistry Laboratory Soil and Water Science Department University of Florida Instructor : Patrick Inglett [email protected] 6/22/20086/22/2008 P.W.WBL Inglett1 1 Nitrogen Introduction N Forms, Distribution, Importance Basic processes of N Cycles Examples of current research Examples of applications Key points learned 6/22/2008 P.W. Inglett 2 1 Nitrogen Learning Objectives Identify the forms of N in wetlands Understand the importance of N in wetlands/global processes Define the major N processes/transformations Understand the importance of microbial activity in N transformations Understand the potential regulators of N processes See the application of N cycle principles to understanding natural and man-made ecosystems 6/22/2008 P.W. Inglett 3 Nitrogen Cycling Plant biomass N N2 NH3 N2 N2O (g) Litterfall Nitrogen Fixation Volatilization Mineralization. Water - Nitrification + + NO3 NH4 Organic N NH4 Column AEROBIC - Plant Peat NO3 + + [NH4 ]s uptake accretion [NH4 ]s Denitrification ANAEROBIC Microbial + Organic N Biomass N Adsorbed NH4 N2, N2O (g) 6/22/2008 P.W. Inglett 4 2 Forms of Nitrogen Organic Nitrogen Inorganic Nitrogen + • Proteins • Ammonium (NH4 ) - • Amino Sugars • Nitrate N (NO3 ) - • Nucleic Acids • Nitrite N (NO2 ) • Urea • Nitrous ox ide (N2O) • Dinitrogen (N2) 6/22/2008 P.W. Inglett 5 N Transformations Solid Gaseous Phase: Phase: Particulate N N2 + Bound: NH4 N2O - - NO3 NO2 Aqueous Phase: + NH4 DON - DIN NO3 - Particulate N NO2 6/22/2008 P.W. Inglett 6 3 Reservoirs of Nitrogen Lithosphere 163,600 x 1018 g Atmosphere 3,860 x 1018 g Hydrosphere 23 x 1018 g Biosphere 0.28 x 1018 g 6/22/2008 P.W.