Southwestern Rare and Endangered Plants
Total Page:16
File Type:pdf, Size:1020Kb
Load more
Recommended publications
-
Genome-Wide Identification of NBS-Encoding Resistance
G C A T T A C G G C A T genes Article Genome-Wide Identification of NBS-Encoding Resistance Genes in Sunflower (Helianthus annuus L.) Surendra Neupane ID , Ethan J. Andersen, Achal Neupane ID and Madhav P. Nepal * ID Department of Biology and Microbiology, South Dakota State University, Brookings, SD 57007, USA; [email protected] (S.N.); [email protected] (E.J.A.); [email protected] (A.N.) * Correspondence: [email protected]; Tel.: +1-605-688-5971 Received: 31 May 2018; Accepted: 20 July 2018; Published: 30 July 2018 Abstract: Nucleotide Binding Site—Leucine-Rich Repeat (NBS-LRR) genes encode disease resistance proteins involved in plants’ defense against their pathogens. Although sunflower is affected by many diseases, only a few molecular details have been uncovered regarding pathogenesis and resistance mechanisms. Recent availability of sunflower whole genome sequences in publicly accessible databases allowed us to accomplish a genome-wide identification of Toll-interleukin-1 receptor-like Nucleotide-binding site Leucine-rich repeat (TNL), Coiled Coil (CC)-NBS-LRR (CNL), Resistance to powdery mildew8 (RPW8)-NBS-LRR (RNL) and NBS-LRR (NL) protein encoding genes. Hidden Markov Model (HMM) profiling of 52,243 putative protein sequences from sunflower resulted in 352 NBS-encoding genes, among which 100 genes belong to CNL group including 64 genes with RX_CC like domain, 77 to TNL, 13 to RNL, and 162 belong to NL group. We also identified signal peptides and nuclear localization signals present in the identified genes and their homologs. We found that NBS genes were located on all chromosomes and formed 75 gene clusters, one-third of which were located on chromosome 13. -
Feedstock List (As of 3/2018)
Feedstock List (as of 3/2018) FOG: Fats / Oils / Greases Wastes / Oil Seeds Algae / Aquatic Species Industrial Aloe (Aloe vera) Meadowfoam (Limnanthes alba) Brown grease Cyanobacteria Babassu (Attalea speciosa) Mustard (Sinapis alba) Crude glycerine Halophytes (e.g., Salicornia bigelovii) *Camelina (Camelina sativa)* Nuts Fish oil Lemna (Lemna spp.) *Canola, winter (Brassica napus[occasionally rapa Olive (Olea europaea) Industrial effluent (palm) Macroalgae or campestris])* *Carinata (Brassica carinata)* Palm (Elaeis guineensis) Shrimp oil (Caridea) Mallow (Malva spp.) Castor (Ricinus communis) Peanut, Cull (Arachis hypogaea) Tall oil pitch Microalgae Citrus (Citron spp.) Pennycress (Thlaspi arvense) Tallow / Lard Spirodela (Spirodela polyrhiza) Coconut (Cocos nucifera) Pongamia (Millettia pinnata) White grease Wolffia (Wolffia arrhiza) Corn, inedible (Zea mays) Poppy (Papaver rhoeas) Waste vegetable oil Cottonseed (Gossypium) *Rapeseed (Brassica napus)* Yellow grease Croton megalocarpus Oryza sativa Croton ( ) Rice Bran ( ) Cuphea (Cuphea viscossisima) Safflower (Carthamus tinctorius) Flax / Linseed (Linum usitatissimum) Sesame (Sesamum indicum) Gourds / Melons (Cucumis melo) Soybean (Glycine max) Grapeseed (Vitis vinifera) Sunflower (Helianthus annuus) Hemp seeds (Cannabis sativa) Tallow tree (Triadica sebifera) Jojoba (Simmondsia chinensis) Tobacco (Nicotiana tabacum) Jatropha (Jatropha curcas) Calophyllum inophyllum Kamani ( ) Lesquerella (Lesquerella fenderi) Cellulose Woody Grasses Residues Other Types: Arundo (Arundo donax) Bagasse -
Element Occurrence Data Standard
ELEMENT OCCURRENCE DATA STANDARD February 6, 2002 NatureServe in cooperation with the Network of Natural Heritage Programs and Conservation Data Centers iii Table of Contents PREFACE.....................................................................................................................................currently under revision ACKNOWLEDGMENTS.....................................................................................................currently under revision ABSTRACT..................................................................................................................................currently under revision 1 INTRODUCTION.........................................................................................................currently under revision 2 EO DEFINITION .................................................................................................................................................10 2.1 Principal EOs........................................................................................................................................................10 2.2 Sub-EOs.................................................................................................................................................................12 2.3 Feature Labels.......................................................................................................................................................13 2.4 Location Use Class..............................................................................................................................................13 -
State of New York City's Plants 2018
STATE OF NEW YORK CITY’S PLANTS 2018 Daniel Atha & Brian Boom © 2018 The New York Botanical Garden All rights reserved ISBN 978-0-89327-955-4 Center for Conservation Strategy The New York Botanical Garden 2900 Southern Boulevard Bronx, NY 10458 All photos NYBG staff Citation: Atha, D. and B. Boom. 2018. State of New York City’s Plants 2018. Center for Conservation Strategy. The New York Botanical Garden, Bronx, NY. 132 pp. STATE OF NEW YORK CITY’S PLANTS 2018 4 EXECUTIVE SUMMARY 6 INTRODUCTION 10 DOCUMENTING THE CITY’S PLANTS 10 The Flora of New York City 11 Rare Species 14 Focus on Specific Area 16 Botanical Spectacle: Summer Snow 18 CITIZEN SCIENCE 20 THREATS TO THE CITY’S PLANTS 24 NEW YORK STATE PROHIBITED AND REGULATED INVASIVE SPECIES FOUND IN NEW YORK CITY 26 LOOKING AHEAD 27 CONTRIBUTORS AND ACKNOWLEGMENTS 30 LITERATURE CITED 31 APPENDIX Checklist of the Spontaneous Vascular Plants of New York City 32 Ferns and Fern Allies 35 Gymnosperms 36 Nymphaeales and Magnoliids 37 Monocots 67 Dicots 3 EXECUTIVE SUMMARY This report, State of New York City’s Plants 2018, is the first rankings of rare, threatened, endangered, and extinct species of what is envisioned by the Center for Conservation Strategy known from New York City, and based on this compilation of The New York Botanical Garden as annual updates thirteen percent of the City’s flora is imperiled or extinct in New summarizing the status of the spontaneous plant species of the York City. five boroughs of New York City. This year’s report deals with the City’s vascular plants (ferns and fern allies, gymnosperms, We have begun the process of assessing conservation status and flowering plants), but in the future it is planned to phase in at the local level for all species. -
Effect of Salinity and Waterlogging on Growth and Survival of Salicornia Europaea L., and Inland Halophyte
Effect of Salinity and Waterlogging on Growth and Survival of Salicornia europaea L., an Inland Halophyte1 CAROLYN HOWES KEIFFER, BRIAN C. MCCARTFIY, AND IRWIN A. UNGAR, Department of Environmental and Plant Biology, Ohio University, Athens, OH 45701 ABSTRACT. Salicornia europaea seedlings were exposed to various salinity and water depths for 11 weeks under controlled, growth chamber conditions. Weekly measurements were made of height, number of nodes, and number of branches per plant. Growth and survival of plants grown with the addition of NaCl were significantly greater (P <0.0001) than for plants which were not given a salt treatment. Although there were no significant (P >0.05) growth differences among plants under different water level conditions within the salt treatment group, plants which were grown without NaCl demonstrated significant decreases in growth in higher water levels, with the greatest growth occurring in the low water treatment group. All plants given a salt treatment survived until the end of the experiment. However, high mortality occurred among the plants that were not salt-treated, with all plants grown under waterlogged conditions dying by week six. The high mortality exhibited by this treatment group indicates that Salicornia, which is typically found in low marsh or inland salt marsh situations, was unable to overcome the combined stress of being continuously waterlogged in a freshwater environment. OHIO J. SCI. 94 (3): 70-73, 1994 INTRODUCTION matter and methane formation is the terminal process in The distribution of plant species in saline environments fresh water marshes (Van Diggelen 1991). Therefore, of inland North America is closely associated with soil plants living in saline waterlogged soils face four major water potentials and other factors influencing the level of problems: 1) inhibition of aerobic root respiration which salinity stress, including microtopography, precipitation, may interfere with the uptake and transport of nutrients and depth of the water table (Ungar et al. -
Wild Helianthus Anomalus and H. Deserticola from the Desert Southwest USA: a Potential Source of Stress Genes for Cultivated Sunflower
Wild Helianthus anomalus and H. deserticola from the Desert Southwest USA: a Potential Source of Stress Genes for Cultivated Sunflower Gerald J. Seiler U.S. Department of Agriculture, Agricultural Research Service, Northern Crop Science Laboratory, Fargo, North Dakota USA 58105 www.fargo.ars.usda.gov Email [email protected] Abstract The narrow genetic base of cultivated sunflower has been broadened by the infusion of genes from wild species, which continue to be a valuable source of desirable agronomic traits. Helianthus anomalus Blake is a wild annual species adapted to sandy dunes of the southwest USA. Helianthus deserticola Heiser is another wild annual species adapted to high desert areas of the same region. The adaptation of these species to harsh habitats makes them potential candidates for improving stress tolerance in the cultivated sunflower crop. Since seed of these species was not available in the USDA-ARS Sunflower Germplasm Collection, an exploration was undertaken in September, 2000 to collect populations for future research. Due to the extremely dry weather in 2000, only two populations of H. anomalus and one H. deserticola were collected. These collections are the first populations of these species added to the sunflower collection in over 20 years. Future research calls for introgression of the wild species into cultivated sunflower and evaluating the progeny for ecophysiological characteristics. Media summary Wild annual sunflowers from the southwestern deserts of the USA have the potential to improve stress tolerance in cultivated sunflower. Key Words Exploration, drought, ecophysiological, germplasm, genetic diversity. Introduction The genus Helianthus is comprised of 51 species with 14 annual and 37 perennial, all native to North America. -
B a N I S T E R I A
B A N I S T E R I A A JOURNAL DEVOTED TO THE NATURAL HISTORY OF VIRGINIA ISSN 1066-0712 Published by the Virginia Natural History Society The Virginia Natural History Society (VNHS) is a nonprofit organization dedicated to the dissemination of scientific information on all aspects of natural history in the Commonwealth of Virginia, including botany, zoology, ecology, archaeology, anthropology, paleontology, geology, geography, and climatology. The society’s periodical Banisteria is a peer-reviewed, open access, online-only journal. Submitted manuscripts are published individually immediately after acceptance. A single volume is compiled at the end of each year and published online. The Editor will consider manuscripts on any aspect of natural history in Virginia or neighboring states if the information concerns a species native to Virginia or if the topic is directly related to regional natural history (as defined above). Biographies and historical accounts of relevance to natural history in Virginia also are suitable for publication in Banisteria. Membership dues and inquiries about back issues should be directed to the Co-Treasurers, and correspondence regarding Banisteria to the Editor. For additional information regarding the VNHS, including other membership categories, annual meetings, field events, pdf copies of papers from past issues of Banisteria, and instructions for prospective authors visit http://virginianaturalhistorysociety.com/ Editorial Staff: Banisteria Editor Todd Fredericksen, Ferrum College 215 Ferrum Mountain Road Ferrum, Virginia 24088 Associate Editors Philip Coulling, Nature Camp Incorporated Clyde Kessler, Virginia Tech Nancy Moncrief, Virginia Museum of Natural History Karen Powers, Radford University Stephen Powers, Roanoke College C. L. Staines, Smithsonian Environmental Research Center Copy Editor Kal Ivanov, Virginia Museum of Natural History Copyright held by the author(s). -
Broad-Spectrum Antimicrobial Properties of Medicinally Important Plant Jatropha Curcas L
Volume 4, Issue 3, September – October 2010; Article 002 ISSN 0976 – 044X BROAD-SPECTRUM ANTIMICROBIAL PROPERTIES OF MEDICINALLY IMPORTANT PLANT JATROPHA CURCAS L. Amit Sharma*, Sonal Saxena, Uzma Rani, Shilpa Rajore, Amla Batra Plant Biotechnology Laboratory, Department of Botany, University of Rajasthan, Jaipur, India Email: [email protected] ABSTRACT In the present study the effectiveness of Jatropha curcas on inactivation of some microorganisms i.e. Escherichia coli, Pseudomonas fluorescens, Pseudomonas aeruginosa, Staphylococcus aureus and Bacillus subtilis were determined. The filter paper disc method was used for screening of crude ethanolic extract of leaves for antimicrobial activity. The paper discs saturated with extract were placed on the surface of the sterilized nutrient agar medium that had been inoculated with the test organisms by using a sterile swab. The diameters of microbial inhibition zones were measured after 24 hours of incubation at 37°C. According to the methodology used, it was possible to conclude that the ethanolic extract presented antimicrobial activity against Escherichia coli, Pseudomonas fluorescens, Pseudomonas aeruginosa and Staphylococcus aureus. No antimicrobial activity was found against Bacillus subtilis. Ethanolic extract of Jatropha leaves presented the largest inhibition zones (i.e. 11mm.) against E. coli. Keywords: Jatropha curcas L., Ethanolic extract, E. coli, P. fluorescens, P. aeruginosa, S. aureus, B. subtilis. INTRODUCTION MATERIALS AND METHODS Human beings have been utilizing plants for basic Plant material preventive and curative health care since time Plant material used for this study was collected from immemorial. Recent estimations suggest that over 9,000 University Botanical Garden, Botany Department, plants have been known for medicinal applications in University of Rajasthan, Jaipur, India. -
WILD Helianthus Species and WILD-SUNFLOWER HYBRIDIZATION in ARGENTINA
HELIA, 27, Nr. 40, p.p. 133-142, (2004) UDC 633.854.78:575.222.7(82) WILD Helianthus species AND WILD-SUNFLOWER HYBRIDIZATION IN ARGENTINA M. Poverene1,2*, A. Carrera1, S. Ureta1,3, M. Cantamutto1,4 1Departament of Agronomy, Universidad Nacional del Sur, Bahía Blanca, Argentina 2CERZOS-CONICET 3CIC Research Fellow 4INTA Received: October 08, 2003 Accepted: January 05, 2004 SUMMARY Two wild Helianthus species native to North America have been natural- ized in Argentina, H. annuus ssp. annuus and H. petiolaris. They grow as adventitious overlapping about 50% of the crop area. Hybridization and intro- gression between these wild species and sunflower have important biological and practical consequences, the former including homoploid hybrid species formation, and the latter including a possibility of transgene spreading from genetically modified (GM) sunflower cultivars to wild or weedy populations. Wild populations were screened for isozyme and morphological variation. Intermediate plants were found in several locations and subjected to progeny tests. Variability among progeny of each one was compared with the variability in wild accessions of both species. Segregation for phenotypic traits, intermedi- ate phenology and low fertility levels were found in most progenies, accounting for the hybrid origin of their maternal plants. Attempts to quantify gene flow included screening of progenies from H. petiolaris populations growing near sunflower crops. Hybrid plants were recognized by morphological traits and reduced fertility. Overall hybridization was about 1%. Hybrid progeny on wild H. annuus plants were identified by a crop isozyme marker. A mean frequency of 7% hybridization was found. These results confirm that gene flow occurs among crop and wild Helianthus species, and it concerns crop management and environmental impact if release of GM sunflower cultivars is to be author- ized in Argentina. -
Vascular Plants and a Brief History of the Kiowa and Rita Blanca National Grasslands
United States Department of Agriculture Vascular Plants and a Brief Forest Service Rocky Mountain History of the Kiowa and Rita Research Station General Technical Report Blanca National Grasslands RMRS-GTR-233 December 2009 Donald L. Hazlett, Michael H. Schiebout, and Paulette L. Ford Hazlett, Donald L.; Schiebout, Michael H.; and Ford, Paulette L. 2009. Vascular plants and a brief history of the Kiowa and Rita Blanca National Grasslands. Gen. Tech. Rep. RMRS- GTR-233. Fort Collins, CO: U.S. Department of Agriculture, Forest Service, Rocky Mountain Research Station. 44 p. Abstract Administered by the USDA Forest Service, the Kiowa and Rita Blanca National Grasslands occupy 230,000 acres of public land extending from northeastern New Mexico into the panhandles of Oklahoma and Texas. A mosaic of topographic features including canyons, plateaus, rolling grasslands and outcrops supports a diverse flora. Eight hundred twenty six (826) species of vascular plant species representing 81 plant families are known to occur on or near these public lands. This report includes a history of the area; ethnobotanical information; an introductory overview of the area including its climate, geology, vegetation, habitats, fauna, and ecological history; and a plant survey and information about the rare, poisonous, and exotic species from the area. A vascular plant checklist of 816 vascular plant taxa in the appendix includes scientific and common names, habitat types, and general distribution data for each species. This list is based on extensive plant collections and available herbarium collections. Authors Donald L. Hazlett is an ethnobotanist, Director of New World Plants and People consulting, and a research associate at the Denver Botanic Gardens, Denver, CO. -
Lntrogression and Its Consequences in Plants Loren H
Botany Publication and Papers Botany 1993 lntrogression and Its Consequences in Plants Loren H. Rieseberg Rancho Santa Ana Botanic Garden Jonathan F. Wendel Iowa State University, [email protected] Follow this and additional works at: http://lib.dr.iastate.edu/bot_pubs Part of the Botany Commons, Evolution Commons, and the Plant Breeding and Genetics Commons Recommended Citation Rieseberg, Loren H. and Wendel, Jonathan F., "lntrogression and Its Consequences in Plants" (1993). Botany Publication and Papers. 8. http://lib.dr.iastate.edu/bot_pubs/8 This Book Chapter is brought to you for free and open access by the Botany at Iowa State University Digital Repository. It has been accepted for inclusion in Botany Publication and Papers by an authorized administrator of Iowa State University Digital Repository. For more information, please contact [email protected]. lntrogression and Its Consequences in Plants Abstract The or le of introgression in plant evolution has been the subject of considerable discussion since the publication of Anderson's influential monograph, Introgressive Hybridization (Anderson, 1949). Anderson promoted the view, since widely held by botanists, that interspecific transfer of genes is a potent evolutionary force. He suggested that "the raw material for evolution brought about by introgression must greatly exceed the new genes produced directly by mutation" ( 1949, p. 102) and reasoned, as have many subsequent authors, that the resulting increases in genetic diversity and number of genetic combinations promote the development or acquisition of novel adaptations (Anderson, 1949, 1953; Stebbins, 1959; Rattenbury, 1962; Lewontin and Birch, 1966; Raven, 1976; Grant, 1981 ). In contrast to this "adaptationist" perspective, others have accorded little ve olutionary significance to introgression, suggesting instead that it should be considered a primarily local phenomenon with only transient effects, a kind of"evolutionary noise" (Barber and Jackson, 1957; Randolph et al., 1967; Wagner, 1969, 1970; Hardin, 1975). -
Relative Competitive Abilities and Growth Characteristics of a Narrowly Endemic and a Geographically Widespread Solidago Species (Asteraceae)
Relative Competitive Abilities and Growth Characteristics of a Narrowly Endemic and a Geographically Widespread Solidago Species (Asteraceae) Jeffrey L. Walck; Jerry M. Baskin; Carol C. Baskin American Journal of Botany, Vol. 86, No. 6. (Jun., 1999), pp. 820-828. Stable URL: http://links.jstor.org/sici?sici=0002-9122%28199906%2986%3A6%3C820%3ARCAAGC%3E2.0.CO%3B2-X American Journal of Botany is currently published by Botanical Society of America. Your use of the JSTOR archive indicates your acceptance of JSTOR's Terms and Conditions of Use, available at http://www.jstor.org/about/terms.html. JSTOR's Terms and Conditions of Use provides, in part, that unless you have obtained prior permission, you may not download an entire issue of a journal or multiple copies of articles, and you may use content in the JSTOR archive only for your personal, non-commercial use. Please contact the publisher regarding any further use of this work. Publisher contact information may be obtained at http://www.jstor.org/journals/botsam.html. Each copy of any part of a JSTOR transmission must contain the same copyright notice that appears on the screen or printed page of such transmission. The JSTOR Archive is a trusted digital repository providing for long-term preservation and access to leading academic journals and scholarly literature from around the world. The Archive is supported by libraries, scholarly societies, publishers, and foundations. It is an initiative of JSTOR, a not-for-profit organization with a mission to help the scholarly community take advantage of advances in technology. For more information regarding JSTOR, please contact [email protected].