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Phylogenetic Diversity, Habitat Loss and Conservation in South
Diversity and Distributions, (Diversity Distrib.) (2014) 20, 1108–1119 BIODIVERSITY Phylogenetic diversity, habitat loss and RESEARCH conservation in South American pitvipers (Crotalinae: Bothrops and Bothrocophias) Jessica Fenker1, Leonardo G. Tedeschi1, Robert Alexander Pyron2 and Cristiano de C. Nogueira1*,† 1Departamento de Zoologia, Universidade de ABSTRACT Brasılia, 70910-9004 Brasılia, Distrito Aim To analyze impacts of habitat loss on evolutionary diversity and to test Federal, Brazil, 2Department of Biological widely used biodiversity metrics as surrogates for phylogenetic diversity, we Sciences, The George Washington University, 2023 G. St. NW, Washington, DC 20052, study spatial and taxonomic patterns of phylogenetic diversity in a wide-rang- USA ing endemic Neotropical snake lineage. Location South America and the Antilles. Methods We updated distribution maps for 41 taxa, using species distribution A Journal of Conservation Biogeography models and a revised presence-records database. We estimated evolutionary dis- tinctiveness (ED) for each taxon using recent molecular and morphological phylogenies and weighted these values with two measures of extinction risk: percentages of habitat loss and IUCN threat status. We mapped phylogenetic diversity and richness levels and compared phylogenetic distances in pitviper subsets selected via endemism, richness, threat, habitat loss, biome type and the presence in biodiversity hotspots to values obtained in randomized assemblages. Results Evolutionary distinctiveness differed according to the phylogeny used, and conservation assessment ranks varied according to the chosen proxy of extinction risk. Two of the three main areas of high phylogenetic diversity were coincident with areas of high species richness. A third area was identified only by one phylogeny and was not a richness hotspot. Faunal assemblages identified by level of endemism, habitat loss, biome type or the presence in biodiversity hotspots captured phylogenetic diversity levels no better than random assem- blages. -
Major Article Epidemiological Study of Snakebite Cases in Brazilian Western Amazonia
Rev Soc Bras Med Trop 51(3):338-346, May-June, 2018 doi: 10.1590/0037-8682-0489-2017 Major Article Epidemiological study of snakebite cases in Brazilian Western Amazonia Katia Regina Pena Schesquini Roriz[1], Kayena Delaix Zaqueo[2],[3], Sulamita Silva Setubal[2], Tony Hiroshi Katsuragawa[4], Renato Roriz da Silva[1], Carla Freire Celedônio Fernandes[2],[4], Luiz Augusto Paiva Cardoso[5], Moreno Magalhães de Souza Rodrigues[2], Andreimar Martins Soares[2], Rodrigo Guerino Stábeli[1],[2] and Juliana Pavan Zuliani[1],[2] [1]. Departamento de Medicina, Universidade Federal de Rondônia, Porto Velho, RO, Brasil. [2]. Fundação Oswaldo Cruz-Rondônia, Porto Velho, RO, Brasil. [3]. Centro de Referência de Jaciara, Instituto Federal de Educação, Ciência e Tecnologia de Mato Grosso, Campus São Vicente, Jaciara, MT, Brasil. [4]. Centro de Pesquisa em Medicina Tropical, Porto Velho, RO, Brasil. [5]. Centro de Medicina Tropical de Rondônia, Porto Velho, RO, Brasil. Abstract Introduction: Brazil has the largest number of snakebite cases in South America, of which the large majority is concentrated in the Midwest and North. Methods: In this descriptive observational study, we assessed the epidemiological and clinical snakebite cases referred to the Centro de Medicina Tropical de Rondônia from September 2008 to September 2010. Results: We followed up 92 cases from admission until discharge, namely 81 (88%) men and 11 (12%) women, with a mean age of 37 years, and mainly from rural areas (91.3%). The snakebites occurred while performing work activities (63%) during the Amazon rainy season (78.3%). The vast majority of individuals presented from the Porto Velho microregion (84.7%). -
The Modular Nature of Bradykinin-Potentiating Peptides
Sciani and Pimenta Journal of Venomous Animals and Toxins including Tropical Diseases (2017) 23:45 DOI 10.1186/s40409-017-0134-7 REVIEW Open Access The modular nature of bradykinin- potentiating peptides isolated from snake venoms Juliana Mozer Sciani and Daniel Carvalho Pimenta* Abstract Bradykinin-potentiating peptides (BPPs) are molecules discovered by Sergio Ferreira – who found them in the venom of Bothrops jararaca in the 1960s – that literally potentiate the action of bradykinin in vivo by, allegedly, inhibiting the angiotensin-converting enzymes. After administration, the global physiological effect of BPP is the decrease of the blood pressure. Due to this interesting effect, one of these peptides was used by David Cushman and Miguel Ondetti to develop a hypotensive drug, the widely known captopril, vastly employed on hypertension treatment. From that time on, many studies on BPPs have been conducted, basically describing new peptides and assaying their pharmacological effects, mostly in comparison to captopryl. After compiling most of these data, we are proposing that snake BPPs are ‘modular’ peptidic molecules, in which the combination of given amino acid ‘blocks’ results in the different existing peptides (BPPs), commonly found in snake venom. We have observed that there would be mandatory modules (present in all snake BPPs), such as the N-terminal pyroglutamic acid and C-terminal QIPP, and optional modules (amino acid blocks present in some of them), such as AP or WAQ. Scattered between these modules, there might be other amino acids that would ‘complete’ the peptide, without disrupting the signature of the classical BPP. This modular arrangement would represent an important evolutionary advantage in terms of biological diversity that might have its origins either at the genomic or at the post-translational modification levels. -
Relationship of Venom Ontogeny and Diet in Bothrops
Herpetologica. 55(2), 1999, 200-204 @ 1999 hy The Herpetologists' League, Inc. RELATIONSHIP OF VENOM ONTOGENY AND DIET IN BOTHROPS DENIS V ANDRADE AND AUGUSTO S. ABE Departamento de Zoologia, Universidade Estadual Paulista, c. p. 199, 13506-900, Rio Claro, São Paulo, Brazil ABSTRACT: We studied ontogenetic changes in venom toxicity of the pitvipers Bothrops jararaca and B. altematus in order to evaluate the relationship between venom action and diet. Toxicity tests (LD",,) were performed for the venoms of adult and juvenile snakes on mice and bullfrog froglets, which represented endothermic and ectothermic prey respectively. The venom of juveniles of B. jararaca, but not of B. altematus, had a higher toxicity on anurans than that of adults. This finding is consistent with the feeding habits of these two species, because juveniles of B. jararaca feed mainly on small anurans and lizards, shifting to endothermic prey at maturity, whereas B. altematus preys mainly on endotherms throughout its life. Venom toxicity in endotherms was higher for adults of B. jararaca compared to juveniles, a feature not observed for B. altematus. It is proposed that prey death!immobilization is the main function of the venom of juvenile snakes. As the snake grows, the digestive role of venom may become increasingly important, because adults prey upon large and bulky prey. The importance of adult venoms in prey digestion is reflected in their higher proteolytic activity. Key words: Bothrops; Electrophoresis; Venom ontogeny; Venom specificity; Viperidae SNAKESare strictly camivorous and al- that ontogenetic variation could be related ways ingest their prey whole, and for many to differences between the feeding habits species feeding episodes occur sporadical- of juvenile and adult snakes (Gans and EI- ly on relatively large animals (Greene, liot, 1968; Sazima, 1991). -
Cohabitation by Bothrops Asper (Garman 1883) and Leptodactylus Savagei (Heyer 2005)
Herpetology Notes, volume 12: 969-970 (2019) (published online on 10 October 2019) Cohabitation by Bothrops asper (Garman 1883) and Leptodactylus savagei (Heyer 2005) Todd R. Lewis1 and Rowland Griffin2 Bothrops asper is one of the largest (up to 245 cm) log-pile habitat (approximately 50 x 70 x 100cm) during pit vipers in Central America (Hardy, 1994; Rojas day and night. Two adults (with distinguishable size et al., 1997; Campbell and Lamar, 2004). Its range and markings) appeared resident with multiple counts extends from northern Mexico to the Pacific Lowlands (>20). Adults of B. asper were identified individually of Ecuador. In Costa Rica it is found predominantly in by approximate size, markings, and position on the log- Atlantic Lowland Wet forests. Leptodactylus savagei, pile. The above two adults were encountered on multiple a large (up to 180 mm females: 170 mm males snout- occasions between November 2002 and December vent length [SVL]), nocturnal, ground-dwelling anuran, 2003 and both used the same single escape hole when is found in both Pacific and Atlantic rainforests from disturbed during the day. Honduras into Colombia (Heyer, 2005). Across their On 20 November 2002, two nights after first locating ranges, both species probably originated from old forest and observing the above two Bothrops asper, a large but now are also found in secondary forest, agricultural, (131mm SVL) adult Leptodactylus savagei was seen disturbed and human inhabited land (McCranie and less than 2m from two coiled pit vipers (23:00 PM local Wilson, 2002; Savage, 2002; Sasa et al., 2009). Such time). When disturbed, it retreated into the same hole the habitat adaptation is most likely aided by tolerance for a adult pit vipers previously escaped to in the daytime. -
Coagulotoxicity of Bothrops (Lancehead Pit-Vipers) Venoms from Brazil: Differential Biochemistry and Antivenom Efficacy Resulting from Prey-Driven Venom Variation
toxins Article Coagulotoxicity of Bothrops (Lancehead Pit-Vipers) Venoms from Brazil: Differential Biochemistry and Antivenom Efficacy Resulting from Prey-Driven Venom Variation Leijiane F. Sousa 1,2, Christina N. Zdenek 2 , James S. Dobson 2, Bianca op den Brouw 2 , Francisco Coimbra 2, Amber Gillett 3, Tiago H. M. Del-Rei 1, Hipócrates de M. Chalkidis 4, Sávio Sant’Anna 5, Marisa M. Teixeira-da-Rocha 5, Kathleen Grego 5, Silvia R. Travaglia Cardoso 6 , Ana M. Moura da Silva 1 and Bryan G. Fry 2,* 1 Laboratório de Imunopatologia, Instituto Butantan, São Paulo 05503-900, Brazil; [email protected] (L.F.S.); [email protected] (T.H.M.D.-R.); [email protected] (A.M.M.d.S.) 2 Venom Evolution Lab, School of Biological Sciences, University of Queensland, St. Lucia, QLD 4072, Australia; [email protected] (C.N.Z.); [email protected] (J.S.D.); [email protected] (B.o.d.B.); [email protected] (F.C.) 3 Fauna Vet Wildlife Consultancy, Glass House Mountains, QLD 4518, Australia; [email protected] 4 Laboratório de Pesquisas Zoológicas, Unama Centro Universitário da Amazônia, Pará 68035-110, Brazil; [email protected] 5 Laboratório de Herpetologia, Instituto Butantan, São Paulo 05503-900, Brazil; [email protected] (S.S.); [email protected] (M.M.T.-d.-R.); [email protected] (K.G.) 6 Museu Biológico, Insituto Butantan, São Paulo 05503-900, Brazil; [email protected] * Correspondence: [email protected] Received: 18 September 2018; Accepted: 8 October 2018; Published: 11 October 2018 Abstract: Lancehead pit-vipers (Bothrops genus) are an extremely diverse and medically important group responsible for the greatest number of snakebite envenomations and deaths in South America. -
Reptiles and Amphibians of Lamanai Outpost Lodge, Belize
Reptiles and Amphibians of the Lamanai Outpost Lodge, Orange Walk District, Belize Ryan L. Lynch, Mike Rochford, Laura A. Brandt and Frank J. Mazzotti University of Florida, Fort Lauderdale Research and Education Center; 3205 College Avenue; Fort Lauderdale, Florida 33314 All pictures taken by RLL: [email protected] and MR: [email protected] Vaillant’s Frog Rio Grande Leopard Frog Common Mexican Treefrog Rana vaillanti Rana berlandieri Smilisca baudinii Veined Treefrog Red Eyed Treefrog Stauffer’s Treefrog Phrynohyas venulosa Agalychnis callidryas Scinax staufferi White-lipped Frog Fringe-toed Foam Frog Fringe-toed Foam Frog Leptodactylus labialis Leptodactylus melanonotus Leptodactylus melanonotus 1 Reptiles and Amphibians of the Lamanai Outpost Lodge, Orange Walk District, Belize Ryan L. Lynch, Mike Rochford, Laura A. Brandt and Frank J. Mazzotti University of Florida, Fort Lauderdale Research and Education Center; 3205 College Avenue; Fort Lauderdale, Florida 33314 All pictures taken by RLL: [email protected] and MR: [email protected] Tungara Frog Marine Toad Gulf Coast Toad Physalaemus pustulosus Bufo marinus Bufo valliceps Sheep Toad House Gecko Dwarf Bark Gecko Hypopachus variolosus Hemidactylus frenatus Shaerodactylus millepunctatus Turnip-tailed Gecko Yucatan Banded Gecko Yucatan Banded Gecko Thecadactylus rapicaudus Coleonyx elegans Coleonyx elegans 2 Reptiles and Amphibians of the Lamanai Outpost Lodge, Orange Walk District, Belize Ryan L. Lynch, Mike Rochford, Laura A. Brandt and Frank J. Mazzotti University -
In-Depth Transcriptome Reveals the Potential Biotechnological Application of Bothrops Jararaca Venom Gland
RESEARCH OPEN ACCESS ISSN 1678-9199 www.jvat.org In-depth transcriptome reveals the potential biotechnological application of Bothrops jararaca venom gland Leandro de Mattos Pereira1,2, Elisa Alves Messias1, Bruna Pereira Sorroche1, Angela das Neves Oliveira1, 1 1 3 Lidia Maria Rebolho Batista Arantes , Ana Carolina de Carvalho , Anita Mitico Tanaka-Azevedo , 3 1 1,4,5* Kathleen Fernandes Grego , André Lopes Carvalho , Matias Eliseo Melendez 1Molecular Oncology Research Center, Barretos Cancer Hospital, Barretos, SP, Brazil. 2Laboratory of Molecular Microbial Ecology, Federal University of Rio de Janeiro (UFRJ), Rio de Janeiro, RJ, Brazil. 3Laboratory of Herpetology, Butantan Institute, São Paulo, SP, Brazil. 4Pelé Little Prince Research Institute, Curitiba, PR, Brazil. 5Little Prince College, Curitiba, PR, Brazil. Abstract Background: Lack of complete genomic data of Bothrops jararaca impedes molecular Keywords: biology research focusing on biotechnological applications of venom gland components. Bothrops jararaca Identification of full-length coding regions of genes is crucial for the correct molecular Venom gland cloning design. Transcriptome Methods: RNA was extracted from the venom gland of one adult female specimen of Bothrops jararaca. Deep sequencing of the mRNA library was performed using Biotechnological application Illumina NextSeq 500 platform. De novo assembly of B. jararaca transcriptome was Stonustoxin done using Trinity. Annotation was performed using Blast2GO. All predicted proteins Verrucotoxin after clustering step were blasted against non-redundant protein database of NCBI using BLASTP. Metabolic pathways present in the transcriptome were annotated using the KAAS-KEGG Automatic Annotation Server. Toxins were identified in the B. jararaca predicted proteome using BLASTP against all protein sequences obtained from Animal Toxin Annotation Project from Uniprot KB/Swiss-Pro database. -
Photoreceptors Morphology and Genetics of the Visual Pigments Of
Vision Research 158 (2019) 72–77 Contents lists available at ScienceDirect Vision Research journal homepage: www.elsevier.com/locate/visres Photoreceptors morphology and genetics of the visual pigments of Bothrops jararaca and Crotalus durissus terrificus (Serpentes, Viperidae) T ⁎ Guido Barbieri Bittencourta, Einat Hauzmana,b, , Daniela Maria Oliveira Boncia,b, Dora Fix Venturaa,b a Departamento de Psicologia Experimental, Instituto de Psicologia, Universidade de São Paulo, São Paulo, Brazil b Instituto de Ensino e Pesquisa, Hospital Israelita Albert Einstein, São Paulo, Brazil ARTICLE INFO ABSTRACT Keywords: Snakes inhabit a great variety of habitats, whose spectral quality of light may vary a lot and influence specific Snakes adaptations of their visual system. In this study, we investigated the genetics of the visual opsins and the Viperidae morphology of retinal photoreceptors, of two nocturnal snakes from the Viperidae family, Bothrops jararaca and Retina Crotalus durissus terrificus, which inhabit preferentially the Atlantic Rain Forest and the Brazilian Savannah, Visual ecology respectively. Total RNA was extracted from homogenized retinas and converted to cDNA. The opsin genes ex- Photoreceptors pressed in snake retinas, LWS, RH1, and SWS1, were amplified by polymerase chain reactions (PCRs) and se- Opsins quenced. The absorption peak (λmax) of the opsins were estimated based on amino acids located at specific spectral tuning sites. Photoreceptor cell populations were analyzed using immunohistochemistry with anti-opsin antibodies. Results showed the same morphological cell populations and same opsins absorption peaks, in both viperid species: double and single cones with LWS photopigment and λmax at ∼555 nm; single cones with SWS1 photopigment and λmax at ∼360 nm; and rods with the rhodopsin RH1 photopigment and λmax at ∼500 nm. -
Antimicrobial Peptides in Reptiles
Pharmaceuticals 2014, 7, 723-753; doi:10.3390/ph7060723 OPEN ACCESS pharmaceuticals ISSN 1424-8247 www.mdpi.com/journal/pharmaceuticals Review Antimicrobial Peptides in Reptiles Monique L. van Hoek National Center for Biodefense and Infectious Diseases, and School of Systems Biology, George Mason University, MS1H8, 10910 University Blvd, Manassas, VA 20110, USA; E-Mail: [email protected]; Tel.: +1-703-993-4273; Fax: +1-703-993-7019. Received: 6 March 2014; in revised form: 9 May 2014 / Accepted: 12 May 2014 / Published: 10 June 2014 Abstract: Reptiles are among the oldest known amniotes and are highly diverse in their morphology and ecological niches. These animals have an evolutionarily ancient innate-immune system that is of great interest to scientists trying to identify new and useful antimicrobial peptides. Significant work in the last decade in the fields of biochemistry, proteomics and genomics has begun to reveal the complexity of reptilian antimicrobial peptides. Here, the current knowledge about antimicrobial peptides in reptiles is reviewed, with specific examples in each of the four orders: Testudines (turtles and tortosises), Sphenodontia (tuataras), Squamata (snakes and lizards), and Crocodilia (crocodilans). Examples are presented of the major classes of antimicrobial peptides expressed by reptiles including defensins, cathelicidins, liver-expressed peptides (hepcidin and LEAP-2), lysozyme, crotamine, and others. Some of these peptides have been identified and tested for their antibacterial or antiviral activity; others are only predicted as possible genes from genomic sequencing. Bioinformatic analysis of the reptile genomes is presented, revealing many predicted candidate antimicrobial peptides genes across this diverse class. The study of how these ancient creatures use antimicrobial peptides within their innate immune systems may reveal new understandings of our mammalian innate immune system and may also provide new and powerful antimicrobial peptides as scaffolds for potential therapeutic development. -
Topographic Anatomy and Sexual Dimorphism of Bothrops Erythromelas Amaral , 1923 (Squamata: Serpentes: Viperidae)
hg_PicturePortrait_gondim et al _topographical_anatomy_bothrops_erythromelas_herPetoZoA.qxd 11.02.2016 16:58 seite 1 herPetoZoA 28 (3/4): 133 - 140 133 wien, 30. Jänner 2016 topographic anatomy and sexual dimorphism of Bothrops erythromelas AMArAl , 1923 (squamata: serpentes: Viperidae) topographische Anatomie und geschlechtsdimorphismus von Bothrops erythromelas AMArAl , 1923 (squamata: serpentes: Viperidae) PAtríCiA de MeneZes gondiM & J oão FAbríCio MotA rodrigues & M AriA JuliAnA borges -l eite & d iVA MAriA borges -n oJosA KurZFAssung informationen über die innere Anatomie brasilianischer schlangen sind rar. Über Bothrops erythromelas AMArAl , 1923, eine endemische Art der Ökoregion Caatinga in nordostbrasilien, ist auch biologisch wenig bekan - nt. diese studie untersucht die topographische Anatomie und den geschlechtsdimorphismus bei dieser lanzen - otternart. die lage der inneren organe wurde in bezug auf die bauchschuppen beschrieben, indem angegeben wurde, auf höhe welcher schuppen sie beginnen und enden. Folgende Parameter der Körpergestalt wurden zur untersuchung des sexualdimorphismus ausgewertet: Anzahl der bauchschuppen, Kopf-rumpf-länge, schwanz - länge, Kopflänge, Kopfbreite, Kopfhöhe und Kopfvolumen. die topographische lage des herzens folgt dem für Viperidae typischen Muster, bei denen dieses organ vergleichsweise weit caudal positioniert ist. das Vorhandensein einer tracheallunge, ein für dieser gruppe typi - sches Merkmal, wurde bestätigt. die geschlechtsunterschiede in der Kopf-rumpf-länge waren nahezu sig - nifikant, mit höheren werten für weibchen, wahrscheinlich um Platz und nahrungsressourcen für große würfe zu gewährleisten. die werte für höhe und Volumen des Kopfes waren ebenfalls bei den weibchen größer. AbstrACt information on the internal anatomy of brazilian serpents is scarce. Bothrops erythromelas AMArAl , 1923, native to the northeast brazilian ecoregion called Caatinga, is also poorly known with regard to its biology. -
Neutralizing Capacity of a New Monovalent Anti-Bothrops Atrox Antivenom: Comparison with Two Commercial Antivenoms
BrazilianNeutralizing Journal capacity of Medical of a new and antivenom Biological againstResearch Bothrops (1997) atrox30: 375-379 375 ISSN 0100-879X Neutralizing capacity of a new monovalent anti-Bothrops atrox antivenom: comparison with two commercial antivenoms R. Otero1, V. Núñez1, 1Proyecto de Ofidismo, Facultad de Medicina, J.M. Gutiérrez4, A. Robles4, 2Facultad de Química Farmacéutica, and R. Estrada4, R.G. Osorio2, 3Facultad de Medicina Veterinaria y de Zootecnia, G. Del-Valle3, R. Valderrama1 Universidad de Antioquia, A.A.1226, Medellín, Colombia and C.A. Giraldo1 4Instituto Clodomiro Picado, Facultad de Microbiología, Universidad de Costa Rica, San José, Costa Rica Abstract Correspondence Three horse-derived antivenoms were tested for their ability to neu- Key words R. Otero tralize lethal, hemorrhagic, edema-forming, defibrinating and myotoxic • Bothrops atrox Proyecto de Ofidismo activities induced by the venom of Bothrops atrox from Antioquia and • Snake venom Facultad de Medicina Chocó (Colombia). The following antivenoms were used: a) polyva- • Antivenom Universidad de Antioquia lent (crotaline) antivenom produced by Instituto Clodomiro Picado • Neutralization A.A.1226, Medellín • (Costa Rica), b) monovalent antibothropic antivenom produced by Antioquia Colombia • Chocó Fax: 57-4-263-8282 Instituto Nacional de Salud-INS (Bogotá), and c) a new monovalent anti-B. atrox antivenom produced with the venom of B. atrox from Research supported by the Antioquia and Chocó. The three antivenoms neutralized all toxic Instituto Colombiano para el activities tested albeit with different potencies. The new monovalent Desarrollo de la Ciencia y la anti-B. atrox antivenom showed the highest neutralizing ability against Tecnología Francisco José de edema-forming and defibrinating effects of B.