DNA Barcoding of Marine Crustaceans from the Estuary and Gulf of St Lawrence: a Regional-Scale Approach
Total Page:16
File Type:pdf, Size:1020Kb
Load more
Recommended publications
-
The 17Th International Colloquium on Amphipoda
Biodiversity Journal, 2017, 8 (2): 391–394 MONOGRAPH The 17th International Colloquium on Amphipoda Sabrina Lo Brutto1,2,*, Eugenia Schimmenti1 & Davide Iaciofano1 1Dept. STEBICEF, Section of Animal Biology, via Archirafi 18, Palermo, University of Palermo, Italy 2Museum of Zoology “Doderlein”, SIMUA, via Archirafi 16, University of Palermo, Italy *Corresponding author, email: [email protected] th th ABSTRACT The 17 International Colloquium on Amphipoda (17 ICA) has been organized by the University of Palermo (Sicily, Italy), and took place in Trapani, 4-7 September 2017. All the contributions have been published in the present monograph and include a wide range of topics. KEY WORDS International Colloquium on Amphipoda; ICA; Amphipoda. Received 30.04.2017; accepted 31.05.2017; printed 30.06.2017 Proceedings of the 17th International Colloquium on Amphipoda (17th ICA), September 4th-7th 2017, Trapani (Italy) The first International Colloquium on Amphi- Poland, Turkey, Norway, Brazil and Canada within poda was held in Verona in 1969, as a simple meet- the Scientific Committee: ing of specialists interested in the Systematics of Sabrina Lo Brutto (Coordinator) - University of Gammarus and Niphargus. Palermo, Italy Now, after 48 years, the Colloquium reached the Elvira De Matthaeis - University La Sapienza, 17th edition, held at the “Polo Territoriale della Italy Provincia di Trapani”, a site of the University of Felicita Scapini - University of Firenze, Italy Palermo, in Italy; and for the second time in Sicily Alberto Ugolini - University of Firenze, Italy (Lo Brutto et al., 2013). Maria Beatrice Scipione - Stazione Zoologica The Organizing and Scientific Committees were Anton Dohrn, Italy composed by people from different countries. -
New Insights from the Neuroanatomy of Parhyale Hawaiensis
bioRxiv preprint doi: https://doi.org/10.1101/610295; this version posted April 18, 2019. The copyright holder for this preprint (which was not certified by peer review) is the author/funder, who has granted bioRxiv a license to display the preprint in perpetuity. It is made available under aCC-BY-NC-ND 4.0 International license. The “amphi”-brains of amphipods: New insights from the neuroanatomy of Parhyale hawaiensis (Dana, 1853) Christin Wittfoth, Steffen Harzsch, Carsten Wolff*, Andy Sombke* Christin Wittfoth, University of Greifswald, Zoological Institute and Museum, Dept. of Cytology and Evolutionary Biology, Soldmannstr. 23, 17487 Greifswald, Germany. https://orcid.org/0000-0001-6764-4941, [email protected] Steffen Harzsch, University of Greifswald, Zoological Institute and Museum, Dept. of Cytology and Evolutionary Biology, Soldmannstr. 23, 17487 Greifswald, Germany. https://orcid.org/0000-0002-8645-3320, sharzsch@uni- greifswald.de Carsten Wolff, Humboldt University Berlin, Dept. of Biology, Comparative Zoology, Philippstr. 13, 10115 Berlin, Germany. http://orcid.org/0000-0002-5926-7338, [email protected] Andy Sombke, University of Vienna, Department of Integrative Zoology, Althanstr. 14, 1090 Vienna, Austria. http://orcid.org/0000-0001-7383-440X, [email protected] *shared last authorship ABSTRACT Background Over the last years, the amphipod crustacean Parhyale hawaiensis has developed into an attractive marine animal model for evolutionary developmental studies that offers several advantages over existing experimental organisms. It is easy to rear in laboratory conditions with embryos available year- round and amenable to numerous kinds of embryological and functional genetic manipulations. However, beyond these developmental and genetic analyses, research on the architecture of its nervous system is fragmentary. -
Hay's Spring Amphipod
Endemic Amphipods in by Diane Pavek our Nation’s Capital Hidden away in shallow, subsurface groundwater communities, the entire known distribution of two tiny species is restricted to only a few springs along Rock Creek in the District of Columbia. Rock Creek Park protects native biodiversity not found elsewhere within the fragmented landscape of the greater Washington, D.C., metropolitan area. Legislation in 1890 established the Rock Creek Park as a unit of the National Park Service (NPS). Once the best sources of drinking water during the 1700s and 1800s, nearly all of the District’s original springs outside the parks have disappeared due to the diversion of rain water or direct piping into the sewers. Other springs and streams were entombed in concrete, filled in and paved over, or contaminated. Both of the park’s endemic species analyses, and species identifications. Kenk’s amphipod are amphipods, small shrimp-like While Rock Creek Park does not have a Photo by Irina Sereg freshwater crustaceans. The Hay’s Spring formal management plan for the Hay’s amphipod (Stygobromus hayi) is known Spring amphipod, conservation measures to exist only in five springs, all along in the park include restricting activities Rock Creek. This District endemic was in an area around the springs and in first collected from a spring within the their recharge areas. National Zoological Park in 1938 We know little about Hay’s Spring (Hubricht and Mackin 1940, Holsinger amphipod biology, its population 1967) and was listed federally as endan- dynamics, or the ecological community gered in 1982. In the late 1990s and early in which it lives. -
Neomysis Mercedis Class: Malacostraca Order: Mysidacea a Mysid, Or Opossum Shrimp Family: Mysidae
Phylum: Arthropoda, Crustacea Neomysis mercedis Class: Malacostraca Order: Mysidacea A mysid, or opossum shrimp Family: Mysidae Taxonomy: Neomysis awatschensis, N. Carapace: Not attached dorsally at intermedia, and N. mercedis were considered posterior edge. Anterior lateral angles acute three different species (with distinct (Figs. 1, 3). morphology) from the western Pacific, Rostrum: A short triangle with northwestern Pacific and northeast Pacific obtusely pointed apex, and rounded, “flanged” coasts (Tattersall 1951; Holmquist 1973; corners (Tattersall and Tattersall 1951). A Brand et al. 1993), but have since been medial depression obscures the pointed apex synonymized as N. mercedis (Moldin 2007). (Holmquist 1973). In total size, rostrum is only as long as bases of eyestalks (Tattersall Description and Tattersall 1951) (Figs. 1, 3). Size: Adults range in size from 11 to 17 mm Eyes: On movable stalks and about in length (Banner 1948b). The illustrated 1.5 times as long as broad and with corneas specimens (from the Columbia River estuary) that are expanded, but not separated into two were up to 17 mm long. portions (Fig. 3). Color: Clear body with black Antennae: Long, slender, and multi- chromatophores, although an individual articulate (Fig. 1). caught on eelgrass was yellow green Antennae Scale: (= squama) Long, (Banner 1948b). narrow, about eight times longer than wide General Morphology: Mysids are shrimp- (Banner 1948b; Brandt et al. 1993). The size like crustaceans that are occasionally called of the scale, however, may vary among opossum shrimp due to the female individuals (Holmquist 1973). The scale is marsupium or brood pouch, which is setose all around and is with pointed apex composed of oostegites. -
Feeding Ecology of a Mysid Species, Neomysis Awatschensis in the Lake Kasumigaura: Combining Approach with Microscopy, Stable Isotope Analysis and DNA Metabarcoding
Plankton Benthos Res 15(1): 44–54, 2020 Plankton & Benthos Research © The Plankton Society of Japan Feeding ecology of a mysid species, Neomysis awatschensis in the Lake Kasumigaura: combining approach with microscopy, stable isotope analysis and DNA metabarcoding 1, 1 2 3 YASUHIDE NAKAMURA *, AKIHIRO TUJI , WATARU MAKINO , SHIN-ICHIRO S. MATSUZAKI , 4 3 3 NOBUAKI NAGATA , MEGUMI NAKAGAWA & NORIKO TAKAMURA 1 Department of Botany, National Museum of Nature and Science, Tsukuba 305–0005, Japan 2 Graduate School of Life Sciences, Tohoku University, Sendai 980–8577, Japan 3 Center for Environmental Biology & Ecosystem Studies, National Institution for Environmental Studies, Tsukuba 305–8506, Japan 4 Division of Collections Conservation, National Museum of Nature and Science, Tsukuba 305–0005, Japan Received 17 December 2018; Accepted 6 January 2020 Responsible Editor: Kazutaka Takahashi doi: 10.3800/pbr.15.44 Abstract: Neomysis awatschensis is an important prey item for various fishes in Lake Kasumigaura, Japan. There is, however, a contradiction concerning the major food sources of this mysid species: whether “bottom mud”, “particulate organic matter (POM) including phytoplankton”, or “mesozooplankton” is the main diet, and this uncertainty may be due to differences in the methodology used to determine the prey items in previous studies. This study examined the main food sources of N. awatschensis by combining three methods to eliminate methodological biases: DNA metabar- coding, microscopy and stable isotope analysis. Planktonic diatoms and green algae sequences were the main taxa de- tected by DNA metabarcoding and microscopy on the fecal pellets. The δ15N values of the mysids were similar to those of phytoplankton feeders rather than carnivorous planktonic crustaceans. -
Common Kansas Spiders
A Pocket Guide to Common Kansas Spiders By Hank Guarisco Photos by Hank Guarisco Funded by Westar Energy Green Team, American Arachnological Society and the Chickadee Checkoff Published by the Friends of the Great Plains Nature Center i Table of Contents Introduction • 2 Arachnophobia • 3 Spider Anatomy • 4 House Spiders • 5 Hunting Spiders • 5 Venomous Spiders • 6-7 Spider Webs • 8-9 Other Arachnids • 9-12 Species accounts • 13 Texas Brown Tarantula • 14 Brown Recluse • 15 Northern Black Widow • 16 Southern & Western Black Widows • 17-18 Woodlouse Spider • 19 Truncated Cellar Spider • 20 Elongated Cellar Spider • 21 Common Cellar Spider • 22 Checkered Cobweb Weaver • 23 Quasi-social Cobweb Spider • 24 Carolina Wolf Spider • 25 Striped Wolf Spider • 26 Dotted Wolf Spider • 27 Western Lance Spider • 28 Common Nurseryweb Spider • 29 Tufted Nurseryweb Spider • 30 Giant Fishing Spider • 31 Six-spotted Fishing Spider • 32 Garden Ghost Spider Cover Photo: Cherokee Star-bellied Orbweaver ii Eastern Funnelweb Spider • 33 Eastern and Western Parson Spiders • 34 Garden Ghost Spider • 35 Bark Crab Spider • 36 Prairie Crab Spider • 37 Texas Crab Spider • 38 Black-banded Crab Spider • 39 Ridge-faced Flower Spider • 40 Striped Lynx Spider • 41 Black-banded Common and Convict Zebra Spiders • 42 Crab Spider Dimorphic Jumping Spider • 43 Bold Jumping Spider • 44 Apache Jumping Spider • 45 Prairie Jumping Spider • 46 Emerald Jumping Spider • 47 Bark Jumping Spider • 48 Puritan Pirate Spider • 49 Eastern and Four-lined Pirate Spiders • 50 Orchard Spider • 51 Castleback Orbweaver • 52 Triangulate Orbweaver • 53 Common & Cherokee Star-bellied Orbweavers • 54 Black & Yellow Garden Spider • 55 Banded Garden Spider • 56 Marbled Orbweaver • 57 Eastern Arboreal Orbweaver • 58 Western Arboreal Orbweaver • 59 Furrow Orbweaver • 60 Eastern Labyrinth Orbweaver • 61 Giant Long-jawed Orbweaver • 62 Silver Long-jawed Orbweaver • 63 Bowl and Doily Spider • 64 Filmy Dome Spider • 66 References • 67 Pocket Guides • 68-69 1 Introduction This is a guide to the most common spiders found in Kansas. -
Araneus Bonali Sp. N., a Novel Lichen-Patterned Species Found on Oak Trunks (Araneae, Araneidae)
A peer-reviewed open-access journal ZooKeys 779: 119–145Araneus (2018) bonali sp. n., a novel lichen-patterned species found on oak trunks... 119 doi: 10.3897/zookeys.779.26944 RESEARCH ARTICLE http://zookeys.pensoft.net Launched to accelerate biodiversity research Araneus bonali sp. n., a novel lichen-patterned species found on oak trunks (Araneae, Araneidae) Eduardo Morano1, Raul Bonal2,3 1 DITEG Research Group, University of Castilla-La Mancha, Toledo, Spain 2 Forest Research Group, INDEHESA, University of Extremadura, Plasencia, Spain 3 CREAF, Cerdanyola del Vallès, 08193 Catalonia, Spain Corresponding author: Raul Bonal ([email protected]) Academic editor: M. Arnedo | Received 24 May 2018 | Accepted 25 June 2018 | Published 7 August 2018 http://zoobank.org/A9C69D63-59D8-4A4B-A362-966C463337B8 Citation: Morano E, Bonal R (2018) Araneus bonali sp. n., a novel lichen-patterned species found on oak trunks (Araneae, Araneidae). ZooKeys 779: 119–145. https://doi.org/10.3897/zookeys.779.26944 Abstract The new species Araneus bonali Morano, sp. n. (Araneae, Araneidae) collected in central and western Spain is described and illustrated. Its novel status is confirmed after a thorough revision of the literature and museum material from the Mediterranean Basin. The taxonomy of Araneus is complicated, but both morphological and molecular data supported the genus membership of Araneus bonali Morano, sp. n. Additionally, the species uniqueness was confirmed by sequencing the barcode gene cytochrome oxidase I from the new species and comparing it with the barcodes available for species of Araneus. A molecular phylogeny, based on nuclear and mitochondrial genes, retrieved a clade with a moderate support that grouped Araneus diadematus Clerck, 1757 with another eleven species, but neither included Araneus bonali sp. -
Amphipod Newsletter 23
−1− NEW AMPHIPOD TAXA IN AMPHIPOD NEWSLETTER 23 Wim Vader, XII-2001 All references are to papers found in the bibliography in AN 23 A. Alphabetic list of new taxa 1. New subfamilies Andaniexinae Berge & Vader 2001 Stegocephalidae AndaniopsinaeBerge & Vader 2001 Stegocephalidae Bathystegocephalinae Berge & Vader 2001 Stegocephalidae Parandaniinae Berge & Vader 2001 Stegocephalidae 2. New genera Alania Berge & Vader 2001 Stegocephalidae Apolochus Hoover & Bousfield 2001 Amphilochidae Austrocephaloides Berge & Vader 2001 Stegocephalidae Austrophippsia Berge & Vader 2001 Stegocephalidae Bouscephalus Berge & Vader 2001 Stegocephalidae Exhyalella (rev.)(Lazo-Wasem & Gable 2001) Hyalellidae Gordania Berge & Vader 2001 Stegocephalidae Hourstonius Hoover & Bousfield 2001 Amphilochidae Marinohyalella Lazo-Wasem & Gable 2001 Hyalellidae Mediterexis Berge & Vader 2001 Stegocephalidae Metandania (rev.) (Berge 2001) Stegocephalidae Miramarassa Ortiz, Lalana & Lio 1999 Aristiidae Othomaera Krapp-Schickel, 2001 Melitidae Parafoxiphalus Alonso de Pina 2001 Phoxocephalidae Pseudo Berge & Vader 2001 Stegocephalidae Schellenbergia Berge & Vader 2001 Stegocephalidae Stegomorphia Berge & Vader 2001 Stegocephalidae Stegonomadia Berge & Vader 2001 Stegocephalidae Zygomaera Krapp-Schickel 2001 Melitidae 3. New species and subspecies abei (Anonyx) Takakawa & Ishimaru 2001 Uristidae abyssorum (rev.) (Andaniotes) (Berge 2001 ) Stegocephalidae −2− africana (Andaniopsis) Berge, Vader & Galan 2001 Stegocephalidae amchitkana (Anisogammarus) Bousfield 2001 Anisogammaridae -
Colonization of Novel Algal Habitats by Juveniles of a Marine Tube-Dwelling Amphipod
Colonization of novel algal habitats by juveniles of a marine tube-dwelling amphipod Marilia Bueno1, Glauco B.O. Machado1,2 and Fosca P.P. Leite1 1 Departamento de Biologia Animal, Universidade Estadual de Campinas, Campinas, São Paulo, Brazil 2 Instituto de Biociências, Campus do Litoral Paulista, Universidade Estadual Paulista, São Vicente, São Paulo, Brazil ABSTRACT Background: Dispersal is an important process affecting population dynamics and connectivity. For marine direct developers, both adults and juveniles may disperse. Although the distribution of juveniles can be initially constrained by their mothers’ choice, they may be able to leave the parental habitat and colonize other habitats. We investigated the effect of habitat quality, patch size and presence of conspecific adults on the colonization of novel habitats by juveniles of the tube-dwelling amphipod Cymadusa filosa associated with the macroalgal host Sargassum filipendula. Methods: We tested the factors listed above on the colonization of juveniles by manipulating natural and artificial plants in both the field and laboratory. Results: In the laboratory, juveniles selected high-quality habitats (i.e., natural alga), where both food and shelter are provided, when low-quality resources (i.e., artificial alga) were also available. In contrast, habitat quality and algal patch size did not affect the colonization by juveniles in the field. Finally, the presence of conspecific adults did not affect the colonization of juveniles under laboratory condition but had a weak effect in the field experiment. Our results suggest that C. filosa juveniles can select and colonize novel habitats, and that such process can be partially affected by habitat Submitted 6 August 2020 quality, but not by patch size. -
Cellular Energy Allocation in the Estuarine Mysid Shrimp Neomysis Integer (Crustacea: Mysidacea) Following Tributyltin Exposure
Journal of Experimental Marine Biology and Ecology 288 (2003) 167–179 www.elsevier.com/locate/jembe Cellular energy allocation in the estuarine mysid shrimp Neomysis integer (Crustacea: Mysidacea) following tributyltin exposure Tim Verslyckea,*, Jordy Vercauterenb, Christophe Devosc, Luc Moensb, Pat Sandrac, Colin R. Janssena a Laboratory of Environmental Toxicology and Aquatic Ecology, Ghent University, J. Plateaustraat 22, B-9000 Ghent, Belgium b Laboratory for Analytical Chemistry, Ghent University, Proeftuinstraat 86, B-9000 Ghent, Belgium c Laboratory for Organic Chemistry, Ghent University, Krijgslaan 281 S4, B-9000 Ghent, Belgium Received 7 October 2002; received in revised form 3 December 2002; accepted 13 December 2002 Abstract Recently, we described the cellular energy allocation (CEA) methodology to asses the effects of abiotic stress on the energy metabolism of the estuarine crustacean Neomysis integer (Crustacea: Mysidacea) [J. Exp. Mar. Biol. Ecol. 279 (2002) 61]. This short-term assay is based on the biochemical assessment of changes in the energy reserves (total carbohydrate, protein and lipid content) and the energy consumption (electron transport activity), and has been shown to be predictive of effects at the population level in daphnids [J. Aquat. Ecosyst. Stress Recovery 6 (1997) 43]. In the present study, the CEA methodology was evaluated using adult N. integer exposed for 96 h to the antifoulant tributyltinchloride (TBTCl). From a range-finding experiment with juvenile N. integer, a 96-h LC50 of 164 ng TBTCl/l was calculated. The energy metabolism of N. integer,as summarized by the CEA, was significantly altered by TBTCl exposure. Mysids exposed to 10, 100 and 1000 ng TBTCl/l consumed less energy and had lower respiration rates (in 10 and 1000 ng TBTCl/l treatments) than the control, resulting in a lower CEA. -
Inter Subfamily Comparison of Gut Microbial Diversity in Twelve Wild
Inter subfamily comparison of gut microbial diversity in twelve wild spider species of family Araneidae Kaomud Tyagi1, Inderjeet Tyagi1, Priya Prasad2, Kailash Chandra1, and Vikas Kumar1 1Zoological Survey of India 2Affiliation not available August 12, 2020 Abstract Spiders are among the most diverse groups of arthropods remarkably known for extra oral digestion. The largest effort based on targeted 16S amplicon next generation sequencing was carried out to decipher the inter subfamily comparison of gut bacterial diversity in spiders and their functional relationship. Twelve spider species belonging to three subfamilies, Araneinae (8), Argiopinae (2) and Gasteracanthinae (2) of family Araneidae have been studied. Analysis revealed the presence of 22 phyla, 145 families, and 364 genera of microbes in the gut microbiome, with Proteobacteria as the highest abundant Phylum. Moreover, the phyla Firmicutes, Actinobacteria and Deinococcus Thermus were also detected. The bacterial phyla Bacteriodetes and Chlamydiae dominated in Cyclosa mulmeinensis and Neoscona bengalensis respectively. At genera level, Acinetobacter, Pseudomonas, Cutibacterium, Staphylococcus, and Bacillus were the most dominant genera in their gut. In addition to this, the genus Prevotella was observed only in one species, Cyclosa mulmeinensis, and endosymbiont genus Wolbachia generally responsible for reproductive alterations was observed in one spider species Eriovixia laglaizei. Our study revealed that the gut bacterial diversity of the spiders collected from wild are quite different from the diet driven spider gut bacterial diversity as published earlier. A functional analysis revealed the involvement of gut microbiota in carbohydrate, lipid, amino acids, fatty acids and energy metabolism. Introduction Spiders (order Araneae) are arthropods that usually act as natural predators on insect pests in agricultural ecosystem (Michalko et al., 2018; Yang et al., 2017) bio-control agent for various diseases (Ndava et al., 2018), and indicator species for environment monitoring (Ossamy et al, 2016). -
California Fish and Wildlife
California Fish and Wildlife 106 • WINTER 2020 • NUM VOLUME BER 1 Journal for the Conservation and Management of California’s Species and Ecosystems Published Quarterly by the California Department of Fish and Wildlife STATE OF CALIFORNIA Gavin Newsom, Governor CALIFORNIA NATURAL RESOURCES AGENCY Wade Crowfoot, Secretary for Natural Resources FISH AND GAME COMMISSION Eric Sklar, President Jacque Hostler-Carmesin, Vice President Russell Burns, Member Peter S. Silva, Member Samantha Murray, Member Melissa Miller-Henson, Executive Director DEPARTMENT OF FISH AND WILDLIFE Charlton “Chuck” Bonham, Director CALIFORNIA FISH AND WILDLIFE EDITORIAL STAFF Ange Darnell Baker ...........................................................................Editor-in-Chief Lorna Bernard ...........................Office of Communication, Education and Outreach Neil Clipperton, Scott Osborn, Laura Patterson, Joel Trumbo, Dan Skalos, Karen Converse, and Kristin Denryter ....................... Wildlife Branch Felipe La Luz ...................................................................................... Water Branch Jeff Rodzen, Jeff Weaver, and Ken Kundargi ................................. Fisheries Branch Cherilyn Burton ........................................... Habitat Conservation Planning Branch Kevin Fleming ...............................................Watershed Restoration Grants Branch Jeff Villepique, Steve Parmenter ............................................ Inland Deserts Region Paul Reilly and James Ray ................................................................Marine