Cionin, a Vertebrate Cholecystokinin/Gastrin
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Colonial Tunicates: Species Guide
SPECIES IN DEPTH Colonial Tunicates Colonial Tunicates Tunicates are small marine filter feeder animals that have an inhalant siphon, which takes in water, and an exhalant siphon that expels water once it has trapped food particles. Tunicates get their name from the tough, nonliving tunic formed from a cellulose-like material of carbohydrates and proteins that surrounds their bodies. Their other name, sea squirts, comes from the fact that many species will shoot LambertGretchen water out of their bodies when disturbed. Massively lobate colony of Didemnum sp. A growing on a rope in Sausalito, in San Francisco Bay. A colony of tunicates is comprised of many tiny sea squirts called zooids. These INVASIVE SEA SQUIRTS individuals are arranged in groups called systems, which form interconnected Star sea squirts (Botryllus schlosseri) are so named because colonies. Systems of these filter feeders the systems arrange themselves in a star. Zooids are shaped share a common area for expelling water like ovals or teardrops and then group together in small instead of having individual excurrent circles of about 20 individuals. This species occurs in a wide siphons. Individuals and systems are all variety of colors: orange, yellow, red, white, purple, grayish encased in a matrix that is often clear and green, or black. The larvae each have eight papillae, or fleshy full of blood vessels. All ascidian tunicates projections that help them attach to a substrate. have a tadpole-like larva that swims for Chain sea squirts (Botryloides violaceus) have elongated, less than a day before attaching itself to circular systems. Each system can have dozens of zooids. -
Settlement Patterns in Ascidians Concerning Have Been
View metadata, citation and similar papers at core.ac.uk brought to you by CORE provided by Digital.CSIC Larval settlement behaviour in six gregarious ascidians in relation to adult 2 distribution 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 Marc Rius1,2,*, George M. Branch2, Charles L. Griffiths1,2, Xavier Turon3 18 19 20 1 Centre for Invasion Biology, Zoology Department, University of Cape Town, 21 Rondebosch 7701, South Africa 22 23 2 Marine Biology Research Centre, Zoology Department, University of Cape Town, 24 Rondebosch 7701, South Africa 25 26 3 Center for Advanced Studies of Blanes (CEAB, CSIC), Accés Cala St. Francesc 14, 27 17300 Blanes (Girona), Spain 28 29 30 31 32 33 34 * Corresponding author: Marc Rius 35 Centre for Invasion Biology, Zoology Department, University of Cape Town, 36 Rondebosch 7701, South Africa 37 E-mail: [email protected] 38 Telephone: +27 21 650 4939 39 Fax: +27 21 650 3301 40 41 Running head: Settlement patterns of gregarious ascidians 42 43 44 1 45 ABSTRACT 46 Settlement influences the distribution and abundance of many marine organisms, 47 although the relative roles of abiotic and biotic factors influencing settlement are poorly 48 understood. Species that aggregate often owe this to larval behaviour, and we ask 49 whether this predisposes ascidians to becoming invasive, by increasing their capacity to 50 maintain their populations. We explored the interactive effects of larval phototaxis and 51 geotaxis and conspecific adult extracts on settlement rates of a representative suite of 52 six species of ascidians that form aggregations in the field, including four aliens with 53 global distributions, and how they relate to adult habitat characteristics. -
Ciona Intestinalis and Comparative Analysis with Ciona Savignyi
Downloaded from genome.cshlp.org on September 24, 2021 - Published by Cold Spring Harbor Laboratory Press Methods Diploid genome reconstruction of Ciona intestinalis and comparative analysis with Ciona savignyi Jong Hyun Kim,1,4 Michael S. Waterman,2,3 and Lei M. Li2,3 1Department of Computer Science, Yonsei University, Seoul, 120-749, Republic of Korea; 2Molecular and Computational Biology Program, Department of Biological Sciences, University of Southern California, Los Angeles, California 90089, USA; 3Department of Mathematics, University of Southern California, Los Angeles, California 90089, USA One of the main goals in genome sequencing projects is to determine a haploid consensus sequence even when clone libraries are constructed from homologous chromosomes. However, it has been noticed that haplotypes can be inferred from genome assemblies by investigating phase conservation in sequenced reads. In this study, we seek to infer haplotypes, a diploid consensus sequence, from the genome assembly of an organism, Ciona intestinalis. The Ciona intestinalis genome is an ideal resource from which haplotypes can be inferred because of the high polymorphism rate (1.2%). The haplotype estimation scheme consists of polymorphism detection and phase estimation. The core step of our method is a Gibbs sampling procedure. The mate-pair information from two-end sequenced clone inserts is exploited to provide long-range continuity. We estimate the polymorphism rate of Ciona intestinalis to be 1.2% and 1.5%, according to two different polymorphism counting schemes. The distribution of heterozygosity number is well fit by a compound Poisson distribution. The N50 length of haplotype segments is 37.9 kb in our assembly, while the N50 scaffold length of the Ciona intestinalis assembly is 190 kb. -
Roles for Androgens in Mediating the Sex Differences of Neuroendocrine and Behavioral Stress Responses Damian G
Zuloaga et al. Biology of Sex Differences (2020) 11:44 https://doi.org/10.1186/s13293-020-00319-2 REVIEW Open Access Roles for androgens in mediating the sex differences of neuroendocrine and behavioral stress responses Damian G. Zuloaga1, Ashley L. Heck2, Rose M. De Guzman1 and Robert J. Handa2* Abstract Estradiol and testosterone are powerful steroid hormones that impact brain function in numerous ways. During development, these hormones can act to program the adult brain in a male or female direction. During adulthood, gonadal steroid hormones can activate or inhibit brain regions to modulate adult functions. Sex differences in behavioral and neuroendocrine (i.e., hypothalamic pituitary adrenal (HPA) axis) responses to stress arise as a result of these organizational and activational actions. The sex differences that are present in the HPA and behavioral responses to stress are particularly important considering their role in maintaining homeostasis. Furthermore, dysregulation of these systems can underlie the sex biases in risk for complex, stress-related diseases that are found in humans. Although many studies have explored the role of estrogen and estrogen receptors in mediating sex differences in stress-related behaviors and HPA function, much less consideration has been given to the role of androgens. While circulating androgens can act by binding and activating androgen receptors, they can also act by metabolism to estrogenic molecules to impact estrogen signaling in the brain and periphery. This review focuses on androgens as an important hormone for modulating the HPA axis and behaviors throughout life and for setting up sex differences in key stress regulatory systems that could impact risk for disease in adulthood. -
Neuropeptides As Attractants of Immune Cells in the Brain and Their Distinct Signaling
Advances in Neuroimmune Biology 1 (2011) 53–62 53 DOI 10.3233/NIB-2011-005 IOS Press Neuropeptides as Attractants of Immune Cells in the Brain and their Distinct Signaling Mami Noda∗, Masataka Ifuku, Yuko Okuno, Kaoru Beppu, Yuki Mori and Satoko Naoe Laboratory of Pathophysiology, Graduate School of Pharmaceutical Sciences, Kyushu University, Fukuoka, Japan Abstract. Microglia, the immune cells of the central nervous system (CNS), are busy and vigilant housekeepers in the adult brain. The main candidate as a chemoattractant for microglia at damaged site is adenosine triphosphate (ATP). However, many other substances can induce immediate change of microglia. Some neuropeptides such as angiotensin II, bradykinin (BK), endothelin, galanin (GAL), and neurotensin are also chemoattractants for microglia. Among them, BK increased microglial migration via B1 receptor with different mechanism from that of ATP. BK-induced migration was controlled by a Gi/o protein-independent pathway, while ATP-induced migration was via a Gi/o protein-dependent and also a mitogen-activated protein kinase (MAPK) / extracellular signal-regulated kinase (ERK)-dependent pathway. On the other hand, GAL is reported to have a similar signal cascade as that of BK, though only part of the signaling was similar to that of BK-induced migration. For example, BK activates reverse-mode Na+/Ca2+ exchange allowing extracllular Ca2+ influx, while GAL induces intracellular Ca2+ mobilization via increasing inositol-1,4,5-trisphosphate. In addition, GAL activates MAPK/ERK-dependent signaling but BK did not. These results suggest that chemoattractants for immune cells in the brain including ATP and each peptide may have distinct role under both physiological and pathophysiological conditions. -
Reorganization of Neural Peptidergic Eminence After Hypophysectomy
The Journal of Neuroscience, October 1994, 14(10): 59966012 Reorganization of Neural Peptidergic Systems Median Eminence after Hypophysectomy Marcel0 J. Villar, Bjiirn Meister, and Tomas Hiikfelt Department of Neuroscience, The Berzelius Laboratory, Karolinska Institutet, Stockholm, 171 77 Sweden Earlier studies have shown the formation of a novel neural crease to a final stage of a few, strongly immunoreactive lobe after hypophysectomy, an experimental manipulation fibers in the external layer at longer survival times. Vaso- that causes transection of neurohypophyseal nerve fibers active intestinal polypeptide (VIP)- and peptide histidine- and removal of pituitary hormones. The mechanisms that isoleucine (PHI)-IR fibers in hypophysectomized animals had underly this regenerative process are poorly understood. already contacted portal vessels 5 d after hypophysectomy, The localization and number of peptide-immunoreactive and from then on progressively increased in numbers. Fi- (-IR) fibers in the median eminence were studied in normal nally, most of the peptide fibers described above formed rats and in rats at different times of survival after hypophy- dense innervation patterns around the large blood vessels sectomy using indirect immunofluorescence histochemistry. along the lateral borders of the median eminence. The number of vasopressin (VP)-IR fibers increased in the The present results show that hypophysectomy induces external layer of the median eminence in 5 d hypophysec- a wide variety of changes in hypothalamic neurosecretory tomized rats. Oxytocin (OXY)-IR fibers decreased in the in- fibers. Not only is the expression of several peptides in these ternal layer and progressively extended into the external fibers modified following different survival times, but a re- layer. -
Glucagon-Like Peptide-1 Reduces Pancreatic Β-Cell Mass Through
www.nature.com/scientificreports OPEN Glucagon-like peptide-1 reduces pancreatic β-cell mass through hypothalamic neural pathways in Received: 3 October 2016 Accepted: 30 May 2017 high-fat diet-induced obese rats Published: xx xx xxxx Hisae Ando, Koro Gotoh, Kansuke Fujiwara, Manabu Anai, Seiichi Chiba, Takayuki Masaki, Tetsuya Kakuma & Hirotaka Shibata We examined whether glucagon-like peptide-1 (GLP-1) affectsβ -cell mass and proliferation through neural pathways, from hepatic afferent nerves to pancreatic efferent nerves via the central nervous system, in high-fat diet (HFD)-induced obese rats. The effects of chronic administration of GLP-1 (7–36) and liraglutide, a GLP-1 receptor agonist, on pancreatic morphological alterations, c-fos expression and brain-derived neurotrophic factor (BDNF) content in the hypothalamus, and glucose metabolism were investigated in HFD-induced obese rats that underwent hepatic afferent vagotomy (VgX) and/ or pancreatic efferent sympathectomy (SpX). Chronic GLP-1 (7–36) administration to HFD-induced obese rats elevated c-fos expression and BDNF content in the hypothalamus, followed by a reduction in pancreatic β-cell hyperplasia and insulin content, thus resulting in improved glucose tolerance. These responses were abolished by VgX and SpX. Moreover, administration of liraglutide similarly activated the hypothalamic neural pathways, thus resulting in a more profound amelioration of glucose tolerance than native GLP-1 (7–36). These data suggest that GLP-1 normalizes the obesity-induced compensatory increase in β-cell mass and glucose intolerance through a neuronal relay system consisting of hepatic afferent nerves, the hypothalamus, and pancreatic efferent nerves. β-cell mass, which is determined by the product of the number and size of pancreatic β-cells, is tightly con- trolled to maintain glucose levels within a normal range. -
From the National Park La Restinga, Isla Margarita, Venezuela
Biota Neotrop., vol. 10, no. 1 Inventory of ascidians (Tunicata, Ascidiacea) from the National Park La Restinga, Isla Margarita, Venezuela Rosana Moreira Rocha1,11, Edlin Guerra-Castro2, Carlos Lira3, Sheila Marquez Pauls4, Ivan Hernández5, Adriana Pérez3, Adriana Sardi6, Jeannette Pérez6, César Herrera6, Ana Karinna Carbonini7, Virginia Caraballo3, Dioceline Salazar8, Maria Cristina Diaz9 & Juan José Cruz-Motta6,10 1 Departamento de Zoologia, Universidade Federal do Paraná – UFPR, CP 19020, CEP 82531-980 Curitiba, PR, Brasil 2Centro de Ecología, Instituto Venezolano de Investigaciones Científicas, CP 21827, Caracas 1020-A, Venezuela, e-mail: [email protected] 3Laboratorio de Zoología, Universidad de Oriente, Núcleo de Nueva Esparta, Escuela de Ciencias Aplicadas del Mar, CP 658, Porlamar 6301, Isla Margarita, Venezuela, e-mail: [email protected], [email protected], [email protected] 4Instituto de Zoologia Tropical, Escuela de Biologia, Universidad Central de Venezuela, CP 47058, Caracas 1041, Venezuela, e-mail: [email protected] 5Departamento de Ciencias, Universidad de Oriente, Núcleo de Nueva Esparta, Guatamara, Isla de Margarita, Venezuela, e-mail: [email protected] 6Laboratorio de Ecología Experimental, Universidad Simón Bolívar, CP 89000, Sartenejas, Caracas 1080, Venezuela, e-mail: [email protected], [email protected], [email protected] 7Laboratorio de Biología Marina, Universidad Simón Bolívar, CP 89000, Sartenejas, Caracas 1080, Venezuela, e-mail: [email protected] 8Departamento de Biología, Escuela de Ciencias, Universidad de Oriente, Núcleo de Sucre, CP 245, CEP 6101,Cumaná, Venezuela, e-mail: [email protected] 9Museo Marino de Margarita, Bulevar El Paseo, Boca del Río, Margarita, Edo. Nueva Esparta, Venezuela, e-mail: [email protected] 10Departamento de Estudios Ambientales, Universidad Simón Bolívar, CP 89000, Sartenejas, Caracas 1080, Venezuela, e-mail: [email protected] 11Corresponding author: Rosana Moreira Rocha, e-mail: [email protected] ROCHA, R.M., GUERRA-CASTRO, E., LIRA, C., PAUL, S.M., HERNÁNDEZ. -
Neuropeptidergic Signaling Partitions Arousal Behaviors in Zebrafish
3142 • The Journal of Neuroscience, February 26, 2014 • 34(9):3142–3160 Behavioral/Cognitive Neuropeptidergic Signaling Partitions Arousal Behaviors in Zebrafish Ian G. Woods,1,2 David Schoppik,2 Veronica J. Shi,2 Steven Zimmerman,2 Haley A. Coleman,1 Joel Greenwood,3 Edward R. Soucy,3 and Alexander F. Schier2,3 1Department of Biology, Ithaca College, Ithaca, New York 14850, and 2Department of Molecular and Cellular Biology and 3Center for Brain Science, Harvard University, Cambridge, Massachusetts 02138 Animals modulate their arousal state to ensure that their sensory responsiveness and locomotor activity match environmental demands. Neuropeptides can regulate arousal, but studies of their roles in vertebrates have been constrained by the vast array of neuropeptides and their pleiotropic effects. To overcome these limitations, we systematically dissected the neuropeptidergic modulation of arousal in larval zebrafish. We quantified spontaneous locomotor activity and responsiveness to sensory stimuli after genetically induced expression of seven evolutionarily conserved neuropeptides, including adenylate cyclase activating polypeptide 1b (adcyap1b), cocaine-related and amphetamine-related transcript (cart), cholecystokinin (cck), calcitonin gene-related peptide (cgrp), galanin, hypocretin, and nocicep- tin. Our study reveals that arousal behaviors are dissociable: neuropeptide expression uncoupled spontaneous activity from sensory responsiveness, and uncovered modality-specific effects upon sensory responsiveness. Principal components analysis and phenotypic clustering revealed both shared and divergent features of neuropeptidergic functions: hypocretin and cgrp stimulated spontaneous locomotor activity, whereas galanin and nociceptin attenuated these behaviors. In contrast, cart and adcyap1b enhanced sensory respon- siveness yet had minimal impacts on spontaneous activity, and cck expression induced the opposite effects. Furthermore, hypocretin and nociceptin induced modality-specific differences in responsiveness to changes in illumination. -
Ciona Intestinalis
UC Berkeley UC Berkeley Previously Published Works Title Unraveling genomic regulatory networks in the simple chordate, Ciona intestinalis Permalink https://escholarship.org/uc/item/6531j4jb Journal Genome Research, 15(12) ISSN 1088-9051 Authors Shi, Weiyang Levine, Michael Davidson, Brad Publication Date 2005-12-01 Peer reviewed eScholarship.org Powered by the California Digital Library University of California Perspective Unraveling genomic regulatory networks in the simple chordate, Ciona intestinalis Weiyang Shi, Michael Levine, and Brad Davidson1 Department of Molecular and Cell Biology, Division of Genetics and Development, Center for Integrative Genomics, University of California, Berkeley, California 94720, USA The draft genome of the primitive chordate, Ciona intestinalis, was published three years ago. Since then, significant progress has been made in utilizing Ciona’s genomic and morphological simplicity to better understand conserved chordate developmental processes. Extensive annotation and sequencing of staged EST libraries make the Ciona genome one of the best annotated among those that are publicly available. The formation of the Ciona tadpole depends on simple, well-defined cellular lineages, and it is possible to trace the lineages of key chordate tissues such as the notochord and neural tube to the fertilized egg. Electroporation methods permit the targeted expression of regulatory genes and signaling molecules in defined cell lineages, as well as the rapid identification of regulatory DNAs underlying cell-specific gene expression. The recent sequencing of a second Ciona genome (C. savignyi) permits the use of simple alignment algorithms for the identification of conserved noncoding sequences, including microRNA genes and enhancers. Detailed expression profiles are now available for almost every gene that encodes a regulatory protein or cell-signaling molecule. -
Making Sense of the Sensory Regulation of Hunger Neurons
Insights & Perspectives Making sense of the sensory regulation Think again of hunger neurons Yiming Chen and Zachary A. Knight* AgRP and POMC neurons are two key cell types that regulate feeding in such as leptin, and increases the level of response to hormones and nutrients. Recently, it was discovered that these hormones that promote feeding, such as neurons are also rapidly modulated by the mere sight and smell of food. This ghrelin. This hormonal switch activates rapid sensory regulation ‘‘resets’’ the activity of AgRP and POMC neurons AgRP neurons and inhibits POMC neu- before a single bite of food has been consumed. This surprising and rons, creating a “hunger drive” that counterintuitive discovery challenges longstanding assumptions about the motivates animals to find and consume food, and that persists until food intake function and regulation of these cells. Here we review these recent findings and replenishes the body of nutrients. In this discuss their implications for our understanding of feeding behavior. We way, a simple negative feedback loop is propose several alternative hypotheses for how these new observations might thought to explain the remarkable be integrated into a revised model of the feeding circuit, and also highlight some coordination of feeding behavior with of the key questions that remain to be answered. physiologic need. While this homeostatic model is Keywords: widely accepted, one key piece of data has been missing: information about anticipatory; arcuate nucleus; feeding; homeostasis; hunger; hypothalamus; . the activity dynamics of these neurons neural circuit in vivo. In the past year, this gap has Introduction consumption [3–6]. POMC neurons, in been closed, as three groups have contrast, are activated by energy surfeit, reported measurements of AgRP and The body weight of most animals is and their activity promotes fasting and POMC neuron dynamics in awake, remarkably stable over time, suggesting weight loss [3, 7]. -
And Description of a New Species, Ciona Interme
An integrative taxonomic framework for the study of the genus Ciona (Ascidiacea) and description of a new species, Ciona intermedia Francesco Mastrototaro, Federica Montesanto, Marika Salonna, Frédérique Viard, Giovanni Chimienti, Egidio Trainito, Carmela Gissi To cite this version: Francesco Mastrototaro, Federica Montesanto, Marika Salonna, Frédérique Viard, Giovanni Chimi- enti, et al.. An integrative taxonomic framework for the study of the genus Ciona (Ascidiacea) and description of a new species, Ciona intermedia. Zoological Journal of the Linnean Society, Linnean Society of London, 2020, 10.1093/zoolinnean/zlaa042. hal-02861027 HAL Id: hal-02861027 https://hal.archives-ouvertes.fr/hal-02861027 Submitted on 8 Jun 2020 HAL is a multi-disciplinary open access L’archive ouverte pluridisciplinaire HAL, est archive for the deposit and dissemination of sci- destinée au dépôt et à la diffusion de documents entific research documents, whether they are pub- scientifiques de niveau recherche, publiés ou non, lished or not. The documents may come from émanant des établissements d’enseignement et de teaching and research institutions in France or recherche français ou étrangers, des laboratoires abroad, or from public or private research centers. publics ou privés. Doi: 10.1093/zoolinnean/zlaa042 An integrative taxonomy framework for the study of the genus Ciona (Ascidiacea) and the description of the new species Ciona intermedia Francesco Mastrototaro1, Federica Montesanto1*, Marika Salonna2, Frédérique Viard3, Giovanni Chimienti1, Egidio Trainito4, Carmela Gissi2,5,* 1 Department of Biology and CoNISMa LRU, University of Bari “Aldo Moro” Via Orabona, 4 - 70125 Bari, Italy 2 Department of Biosciences, Biotechnologies and Biopharmaceutics, University of Bari “Aldo Moro”, Via Orabona, 4 - 70125 Bari, Italy 3 Sorbonne Université, CNRS, Lab.