FAH Deficiency (Tyrosinemia Type 1)
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Incidence of Inborn Errors of Metabolism by Expanded Newborn
Original Article Journal of Inborn Errors of Metabolism & Screening 2016, Volume 4: 1–8 Incidence of Inborn Errors of Metabolism ª The Author(s) 2016 DOI: 10.1177/2326409816669027 by Expanded Newborn Screening iem.sagepub.com in a Mexican Hospital Consuelo Cantu´-Reyna, MD1,2, Luis Manuel Zepeda, MD1,2, Rene´ Montemayor, MD3, Santiago Benavides, MD3, Hector´ Javier Gonza´lez, MD3, Mercedes Va´zquez-Cantu´,BS1,4, and Hector´ Cruz-Camino, BS1,5 Abstract Newborn screening for the detection of inborn errors of metabolism (IEM), endocrinopathies, hemoglobinopathies, and other disorders is a public health initiative aimed at identifying specific diseases in a timely manner. Mexico initiated newborn screening in 1973, but the national incidence of this group of diseases is unknown or uncertain due to the lack of large sample sizes of expanded newborn screening (ENS) programs and lack of related publications. The incidence of a specific group of IEM, endocrinopathies, hemoglobinopathies, and other disorders in newborns was obtained from a Mexican hospital. These newborns were part of a comprehensive ENS program at Ginequito (a private hospital in Mexico), from January 2012 to August 2014. The retrospective study included the examination of 10 000 newborns’ results obtained from the ENS program (comprising the possible detection of more than 50 screened disorders). The findings were the following: 34 newborns were confirmed with an IEM, endocrinopathies, hemoglobinopathies, or other disorders and 68 were identified as carriers. Consequently, the estimated global incidence for those disorders was 3.4 in 1000 newborns; and the carrier prevalence was 6.8 in 1000. Moreover, a 0.04% false-positive rate was unveiled as soon as diagnostic testing revealed negative results. -
Tetrahydrobiopterin Loading Test in Hyperphenylalaninemia
003 1-399819113005-0435$03.00/0 PEDIATRIC RESEARCH Vol. 30, No. 5, 1991 Copyright 0 199 1 International Pediatric Research Foundation, Inc. Pr~ntc.d in U.S. A Tetrahydrobiopterin Loading Test in Hyperphenylalaninemia ALBERT0 PONZONE, ORNELLA GUARDAMAGNA, SILVIO FERRARIS, GIOVANNI B. FERRERO, IRMA DIANZANI, AND RICHARD G. H. COTTON InstiflifeofPediatric Clinic(A.P., O.G., S.F., G.B.F., I.D.], University of Torino, 10126 Torino, Italy and Olive Miller Laboratory [R.G.H.C.],Murdoch Institute, Royal Children's Hospital, Vicroria,Australia 3052 ABSTRACT. Some cases of primary hyperphenylalanine- PKU to describe some cases clinically unresponsive to a Phe- mia are not caused by the lack of phenylalanine hydroxyl- restricted diet and later shown to be due to BH4 deficiency ase, but by the lack of its cofactor tetrahydrobiopterin. ( 1-4). These patients are not clinically responsive to a phenylal- By analyzing all the essential components of the complex anine-restricted diet, but need specific substitution therapy. hydroxylation system of aromatic amino acids, it became appar- Thus, it became necessary to examine all newborns ent that a defect in the BH4 recycling enzyme DHPR (EC screened as positive with the Guthrie test for tetrahydro- 1.66.99.7) and two defects in BH4 synthetic pathway enzymes, biopterin deficiency. Methods based on urinary pterin or guanosine triphosphate cyclohydrolase I (EC 3.5.4.16) and 6- on specific enzyme activity measurements are limited in PPH4S, may lead to cofactor deficiency resulting in HPA and in their availability, and the simplest method, based on the impaired production of dopamine and serotonin (5-7). -
Amino Acid Disorders
471 Review Article on Inborn Errors of Metabolism Page 1 of 10 Amino acid disorders Ermal Aliu1, Shibani Kanungo2, Georgianne L. Arnold1 1Children’s Hospital of Pittsburgh, University of Pittsburgh School of Medicine, Pittsburgh, PA, USA; 2Western Michigan University Homer Stryker MD School of Medicine, Kalamazoo, MI, USA Contributions: (I) Conception and design: S Kanungo, GL Arnold; (II) Administrative support: S Kanungo; (III) Provision of study materials or patients: None; (IV) Collection and assembly of data: E Aliu, GL Arnold; (V) Data analysis and interpretation: None; (VI) Manuscript writing: All authors; (VII) Final approval of manuscript: All authors. Correspondence to: Georgianne L. Arnold, MD. UPMC Children’s Hospital of Pittsburgh, 4401 Penn Avenue, Suite 1200, Pittsburgh, PA 15224, USA. Email: [email protected]. Abstract: Amino acids serve as key building blocks and as an energy source for cell repair, survival, regeneration and growth. Each amino acid has an amino group, a carboxylic acid, and a unique carbon structure. Human utilize 21 different amino acids; most of these can be synthesized endogenously, but 9 are “essential” in that they must be ingested in the diet. In addition to their role as building blocks of protein, amino acids are key energy source (ketogenic, glucogenic or both), are building blocks of Kreb’s (aka TCA) cycle intermediates and other metabolites, and recycled as needed. A metabolic defect in the metabolism of tyrosine (homogentisic acid oxidase deficiency) historically defined Archibald Garrod as key architect in linking biochemistry, genetics and medicine and creation of the term ‘Inborn Error of Metabolism’ (IEM). The key concept of a single gene defect leading to a single enzyme dysfunction, leading to “intoxication” with a precursor in the metabolic pathway was vital to linking genetics and metabolic disorders and developing screening and treatment approaches as described in other chapters in this issue. -
Gene Function
Gene Function Chapter 12 The Central Dogma of Biology GATC transcription GAUC translation 20 amino acids Gene Control of Enzyme Structure • Genes encode proteins, including enzymes. • Genes work in sets to accomplish biochemical pathways. • Genes often work in cooperation with other genes. • These discoveries are the foundation of modern molecular genetics. Genetic Approach to Studying the Gene – Enzyme Connection Beadle (Drosophila geneticist) and Tatum (biochemist), 1940’s • Tried for 6 years (1935- 1941) to link genes to chemical reactions in Drosophila. • Switched to a simpler organism: Neurospora crassa • Irradiated and isolated many arginine auxotrophs. Beadle and Tatum and Neurospora mutants • Mutagenized normal Neurospora cells; undergo meiosis… • Isolated individual cells (ascospores) into separate tubes with complete media (growth media that is rich with amino acids, nucleotides, etc… opposite of minimal media). • Tested each for the ability to grow on minimal media. Neurospora Mutants Certain cells did not grow on minimal medium. The type of auxotrophy was tested on media with various supplements. Arginine Mutants Identified • After isolating mutants deficient in amino acid production, specific amino acid deficiencies were identified. • For the purpose of our discussion, we will focus on the arginine mutants. • Several independent arginine mutants were isolated. arg X arg mutant 1 mutant 2 Only if strains are mutant for heterokaryon: a different transient diploid genes How Do We Figure Out The Pathway? Each complementation group responded differently to supplements which were thought to be intermediates in the biochemical synthesis pathway leading to arginine. l ornithine a m i n i m citrulline - - - arginine Next, figure out at which step in the pathway each complementation group (gene) acts… Mutant minimal citrulline ornithine arginine arg-1 - + + + arg-2 - + - + arg-3 - - - + arg-1 arg-2 arg-3 enz. -
Screening for Inherited Metabolic Disease in Wales Using Urine-Impregnated Filter Paper
Arch Dis Child: first published as 10.1136/adc.50.4.264 on 1 April 1975. Downloaded from Archives of Disease in Childhood, 1975, 50, 264. Screening for inherited metabolic disease in Wales using urine-impregnated filter paper D. M. BRADLEY From the Department of Medicine, Welsh National School of Medicine, Heath Park, Cardiff Bradley, D. M. (1975). Archives of Disease in Childhood, 50, 264. Screening for inherited metabolic disease in Wales using urine-impregnated filter paper. Urine specimens from 135 295 infants have been collected on filter paper and tested for 7 abnormal urinary constituents using spot tests and paper chromato- graphy. The method has detected 5 infants with phenylketonuria, 4 with histidinae- mia, 5 with cystinuria, 5 with diabetes mellitus, and one with alcaptonuria. Transient abnormalities such as tyrosyluria, generalized aminoaciduria, cystinuria, and glyco- suria have been noted. 2 phenylketonuric infants failed to excrete a detectable quantity of o-hydroxyphenylacetic acid at the time of testing. The findings show that the detection of this compound in urine is an unreliable method of screening for phenylketonuria. Early detection of phenylketonuria became Method essential when it was found that the severe mental Collection of urine specimens. The recom- retardation associated with this disorder could be mended time of testing is between the 10th and 14th prevented by introducing a low phenylalanine diet day of life. In practice, 53% of all specimens are in the first months of life (Bickel, Gerrard, and collected by the 14th day, rising to 98% by the 28th Hickmans, 1953). The Medical Research Council day (Table I). -
Living with Classical Homocystinuria
Living with Classical Homocystinuria This brochure will help you understand what classical homocystinuria is, how it affects your body, and how you can manage your condition A few words about this brochure What is homocystinuria? Has your doctor diagnosed you or your child You may have heard the word “homocystinuria” with homocystinuria (HO-mo-SIS-tin-YUR- for the first time when your doctor talked to ee-uh)? There are three types of genetic you about possibly having this condition. disorders that cause homocystinuria. Each Homocystinuria is a rare disorder involving type has a different cause and different the amino acid homocysteine (HO-mo-SIS- health issues. This brochure will talk about teen). Amino acids are building blocks that your classical homocystinuria. The information body uses to make proteins. Homocystinuria will help you understand classical occurs when there is a buildup of the amino acid homocystinuria and how you can manage homocysteine in your blood and urine. your condition. High levels of homocysteine can be harmful to your body. You may be reading this brochure because you have classical homocystinuria or Why is there homocysteine because your child or a sibling or a friend in your body? has it. Or perhaps you’re a healthcare professional. Please note the brochure It starts with the foods you eat. Your body addresses “you,” but it’s understood that makes homocysteine from another amino acid “you,” the reader, may not have classical called methionine (meh-THIGH-uh-neen). Most homocystinuria yourself. foods contain some methionine. But high-protein foods such as meat, fish, eggs, or cheese tend to have the most methionine. -
Ex Vivo Gene Therapy: a “Cultured” Surgical Approach to Curing Inherited Liver Disease
Mini Review Open Access J Surg Volume 10 Issue 3 - March 2019 Copyright © All rights are reserved by Joseph B Lillegard DOI: 10.19080/OAJS.2019.10.555788 Ex Vivo Gene Therapy: A “Cultured” Surgical Approach to Curing Inherited Liver Disease Caitlin J VanLith1, Robert A Kaiser1,2, Clara T Nicolas1 and Joseph B Lillegard1,2,3* 1Department of Surgery, Mayo Clinic, Rochester, MN, USA 2Midwest Fetal Care Center, Children’s Hospital of Minnesota, Minneapolis, MN, USA 3Pediatric Surgical Associates, Minneapolis, MN, USA Received: February 22, 2019; Published: March 21, 2019 *Corresponding author: Joseph B Lillegard, Midwest Fetal Care Center, Children’s Hospital of Minnesota, Minneapolis, Minnesota, USA and Mayo Clinic, Rochester, Minnesota, USA Introduction Inborn errors of metabolism (IEMs) are a group of inherited diseases caused by mutations in a single gene [1], many of which transplant remains the only curative option. Between 1988 and 2018, 12.8% of 17,009 pediatric liver transplants in the United States(see were primarily due to an inherited liver). disease. are identified in Table 1. Though individually rare, combined incidence is about 1 in 1,000 live births [2]. While maintenance www.optn.transplant.hrsa.gov/data/ Table 1: List of 35 of the most common Inborn Errors of Metabolism. therapies exist for some of these liver-related diseases, Inborn Error of Metabolism Abbreviation Hereditary Tyrosinemia type 1 HT1 Wilson Disease Wilson Glycogen Storage Disease 1 GSD1 Carnitine Palmitoyl Transferase Deficiency Type 2 CPT2 Glycogen Storage -
Disease Name Tyrosinemia Type III
Disease Name Tyrosinemia type III Alternate name(s) Hereditary infantile tyrosinemia, Hepatorenal tyrosinemia, Fumarylacetoacetase deficiency, Fumarylacetoacetate hydrolase FAH deficiency Acronym TYR-3 Disease Classification Amino Acid Disorder Variants Yes Variant name Tyrosinemia I chronic-type, Tyrosinemia II, Tyrosinemia III Symptom onset Infancy Symptoms Hepatocellular degeneration leading to acute hepatic failure or chronic cirrhosis and hepatocellular carcinoma, renal Fanconi syndrome, peripheral neuropathy, seizures and possible cardiomyopathy. Natural history without treatment Chronic liver disease leading to cirrhosis and hepatocellular carcinoma. Renal tubular disease (Fanconi syndrome) with phosphaturia, aminoaciduria and often glycosuria. May lead to clinical rickets. Peripheral neuropathy. Self- injurious behavior, seizures and cardiomyopathy have been observed. Coagulation problems. Natural history with treatment Hepatitic disease may progress despite dietary treatment. NTBC treatment leads to improvements in kidney, liver and neurologic function, but may not affect incidence of liver cancer. Treatment Dietary restriction of phenylalanine and tyrosine. NTBC (2-(2-nitro-4-trifluoro- methylbenzoyl)-1,3-cyclohexanedione) treatment which improves hepatic and renal function. Liver transplantation when indicated to prevent hepatocellular carcinoma. Vitamin D to heal rickets. Other Unpleasant odor due to accumulation of methionine. Sometimes described as “cabbage-like” odor. Physical phenotype No abnormalities present at birth. -
The PAH Gene, Phenylketonuria, and a Paradigm Shift
HUMAN MUTATION 28(9), 831^845, 2007 WILEY 200TH ANNIVERSARY TRIBUTE ARTICLE The PAH Gene, Phenylketonuria, and a Paradigm Shift Charles R. Scriver1–4Ã 1Department of Human Genetics, Faculty of Medicine, McGill University, Montreal, Quebec, Canada; 2Department of Biochemistry, Faculty of Medicine, McGill University, Montreal, Quebec, Canada; 3Department of Pediatrics, Faculty of Medicine, McGill University, Montreal, Quebec, Canada; 4Department of Biology, Faculty of Science, McGill University, Montreal, Quebec, Canada Communicated by Johannes Zschocke ‘‘Inborn errors of metabolism,’’ first recognized 100 years ago by Garrod, were seen as transforming evidence for chemical and biological individuality. Phenylketonuria (PKU), a Mendelian autosomal recessive phenotype, was identified in 1934 by Asbjo¨rn Fo¨lling. It is a disease with impaired postnatal cognitive development resulting from a neurotoxic effect of hyperphenylalaninemia (HPA). Its metabolic phenotype is accountable to multifactorial origins both in nurture, where the normal nutritional experience introduces L-phenylalanine, and in nature, where mutations (4500 alleles) occur in the phenylalanine hydroxylase gene (PAH) on chromosome 12q23.2 encoding the L-phenylalanine hydroxylase enzyme (EC 1.14.16.1). The PAH enzyme converts phenylalanine to tyrosine in the presence of molecular oxygen and catalytic amounts of tetrahydrobiopterin (BH4), its nonprotein cofactor. PKU is among the first of the human genetic diseases to enter, through newborn screening, the domain of public health, and to show a treatment effect. This effect caused a paradigm shift in attitudes about genetic disease. The PKU story contains many messages, including: a framework on which to appreciate the complexity of PKU in which phenotype reflects both locus-specific and genomic components; what the human PAH gene tells us about human population genetics and evolution of modern humans; and how our interest in PKU is served by a locus-specific mutation database (http://www.pahdb.mcgill.ca; last accessed 20 March 2007). -
Molecular Patterns Behind Immunological and Metabolic Alterations in Lysinuric Protein Intolerance
MOLECULAR PATTERNS BEHIND IMMUNOLOGICAL AND METABOLIC ALTERATIONS IN LYSINURIC PROTEIN INTOLERANCE Johanna Kurko TURUN YLIOPISTON JULKAISUJA – ANNALES UNIVERSITATIS TURKUENSIS Sarja - ser. D osa - tom. 1220 | Medica - Odontologica | Turku 2016 University of Turku Faculty of Medicine Institute of Biomedicine Department of Medical Biochemistry and Genetics Turku Doctoral Programme of Molecular Medicine (TuDMM) Supervised by Adjunct Professor Juha Mykkänen, Ph.D Professor Harri Niinikoski, MD, Ph.D Research Centre of Applied and Department of Paediatrics and Preventive Cardiovascular Medicine Adolescent Medicine University of Turku Turku University Hospital Turku, Finland University of Turku Turku, Finland Reviewed by Adjunct Professor Risto Lapatto, MD, Ph.D Adjunct Professor Outi Monni, Ph.D Department of Paediatrics Research Programs’ Unit and Institute of Helsinki University Hospital Biomedicine University of Helsinki University of Helsinki Helsinki, Finland Helsinki, Finland Opponent Adjunct Professor Päivi Saavalainen, Ph.D Research Programs Unit University of Helsinki Helsinki, Finland The originality of this thesis has been checked in accordance with the University of Turku quality assurance system using the Turnitin OriginalityCheck service. ISBN 978-951-29-6399-7 (PRINT) ISBN 978-951-29-6400-0 (PDF) ISSN 0355-9483 (PRINT) ISSN 2343-3213 (ONLINE) Painosalama Oy - Turku, Finland 2016 ‘Nothing has such power to broaden the mind as the ability to investigate systematically and truly all that comes under thy observation in life.’ Marcus -
Disorders Alphabetical by Disease Updated 1/2020
Disorders Alphabetical by Disease updated 1/2020 Disorders Abbreviation Classification Recommended Uniform Screening Panel (RUSP) Classification 2,4 Dienoyl CoA Reductase Deficiency DE RED Fatty Acid Oxidation Disorder Secondary Condition 2-Methyl 3 Hydroxy Butyric Aciduria 2M3HBA Organic Acid Disorder Secondary Condition 2-Methyl Butyryl-CoA Dehydrogenase Deficiency 2MBG Organic Acid Disorder Secondary Condition (called 2-Methylbutyrylglycinuria on RUSP) 3-Hydroxy-3-Methylglutaryl CoA Lyase Deficiency HMG Organic Acid Disorder Core Condition 3-Methylcrotonyl CoA Carboxylase Deficiency 3MCC Organic Acid Disorder Core Condition 3-Methylglutaconic Aciduria 3MGA Organic Acid Disorder Secondary Condition Alpha-Thalassemia (Bart's Hb) Hemoglobin Bart's Hemoglobin Disorder Secondary Conditoin Argininemia, Arginase Deficiency ARG Amino Acid Disorder Secondary Condition Arginosuccinic Aciduria ASA Amino Acid Disorder Core Condition Benign Hyperphenylalaninemia PHE Amino Acid Disorder Secondary Condition Beta-Ketothiolase Deficiency BKT Organic Acid Disorder Core Condition Biopterin Defect in Cofactor Biosynthesis BIOPT (BS) Amino Acid Disorder Secondary Condition Biopterin Defect in Cofactor Regeneration BIOPT (Reg) Amino Acid Disorder Secondary Condition Biotinidase Deficiency BIO Metabolic Disorder of Biotin Recycling Core Condition Carbamoyltransferase Deficiency, Carbamoyl Phosphate Synthetase I Deficiency CPS Amino Acid Disorder Not on RUSP Carnitine Palmitoyl Transferase Deficiency Type 1 CPT I Fatty Acid Oxidation Disorder Secondary Condition -
Diseases Catalogue
Diseases catalogue AA Disorders of amino acid metabolism OMIM Group of disorders affecting genes that codify proteins involved in the catabolism of amino acids or in the functional maintenance of the different coenzymes. AA Alkaptonuria: homogentisate dioxygenase deficiency 203500 AA Phenylketonuria: phenylalanine hydroxylase (PAH) 261600 AA Defects of tetrahydrobiopterine (BH 4) metabolism: AA 6-Piruvoyl-tetrahydropterin synthase deficiency (PTS) 261640 AA Dihydropteridine reductase deficiency (DHPR) 261630 AA Pterin-carbinolamine dehydratase 126090 AA GTP cyclohydrolase I deficiency (GCH1) (autosomal recessive) 233910 AA GTP cyclohydrolase I deficiency (GCH1) (autosomal dominant): Segawa syndrome 600225 AA Sepiapterin reductase deficiency (SPR) 182125 AA Defects of sulfur amino acid metabolism: AA N(5,10)-methylene-tetrahydrofolate reductase deficiency (MTHFR) 236250 AA Homocystinuria due to cystathionine beta-synthase deficiency (CBS) 236200 AA Methionine adenosyltransferase deficiency 250850 AA Methionine synthase deficiency (MTR, cblG) 250940 AA Methionine synthase reductase deficiency; (MTRR, CblE) 236270 AA Sulfite oxidase deficiency 272300 AA Molybdenum cofactor deficiency: combined deficiency of sulfite oxidase and xanthine oxidase 252150 AA S-adenosylhomocysteine hydrolase deficiency 180960 AA Cystathioninuria 219500 AA Hyperhomocysteinemia 603174 AA Defects of gamma-glutathione cycle: glutathione synthetase deficiency (5-oxo-prolinuria) 266130 AA Defects of histidine metabolism: Histidinemia 235800 AA Defects of lysine and