Myoglobin Primary Structure Reveals Multiple Convergent Transitions To
Total Page:16
File Type:pdf, Size:1020Kb
Load more
Recommended publications
-
MAMMALS of OHIO F I E L D G U I D E DIVISION of WILDLIFE Below Are Some Helpful Symbols for Quick Comparisons and Identfication
MAMMALS OF OHIO f i e l d g u i d e DIVISION OF WILDLIFE Below are some helpful symbols for quick comparisons and identfication. They are located in the same place for each species throughout this publication. Definitions for About this Book the scientific terms used in this publication can be found at the end in the glossary. Activity Method of Feeding Diurnal • Most active during the day Carnivore • Feeds primarily on meat Nocturnal • Most active at night Herbivore • Feeds primarily on plants Crepuscular • Most active at dawn and dusk Insectivore • Feeds primarily on insects A word about diurnal and nocturnal classifications. Omnivore • Feeds on both plants and meat In nature, it is virtually impossible to apply hard and fast categories. There can be a large amount of overlap among species, and for individuals within species, in terms of daily and/or seasonal behavior habits. It is possible for the activity patterns of mammals to change due to variations in weather, food availability or human disturbances. The Raccoon designation of diurnal or nocturnal represent the description Gray or black in color with a pale most common activity patterns of each species. gray underneath. The black mask is rimmed on top and bottom with CARNIVORA white. The raccoon’s tail has four to six black or dark brown rings. habitat Raccoons live in wooded areas with Tracks & Skulls big trees and water close by. reproduction Many mammals can be elusive to sighting, leaving Raccoons mate from February through March in Ohio. Typically only one litter is produced each year, only a trail of clues that they were present. -
JVP 26(3) September 2006—ABSTRACTS
Neoceti Symposium, Saturday 8:45 acid-prepared osteolepiforms Medoevia and Gogonasus has offered strong support for BODY SIZE AND CRYPTIC TROPHIC SEPARATION OF GENERALIZED Jarvik’s interpretation, but Eusthenopteron itself has not been reexamined in detail. PIERCE-FEEDING CETACEANS: THE ROLE OF FEEDING DIVERSITY DUR- Uncertainty has persisted about the relationship between the large endoskeletal “fenestra ING THE RISE OF THE NEOCETI endochoanalis” and the apparently much smaller choana, and about the occlusion of upper ADAM, Peter, Univ. of California, Los Angeles, Los Angeles, CA; JETT, Kristin, Univ. of and lower jaw fangs relative to the choana. California, Davis, Davis, CA; OLSON, Joshua, Univ. of California, Los Angeles, Los A CT scan investigation of a large skull of Eusthenopteron, carried out in collaboration Angeles, CA with University of Texas and Parc de Miguasha, offers an opportunity to image and digital- Marine mammals with homodont dentition and relatively little specialization of the feeding ly “dissect” a complete three-dimensional snout region. We find that a choana is indeed apparatus are often categorized as generalist eaters of squid and fish. However, analyses of present, somewhat narrower but otherwise similar to that described by Jarvik. It does not many modern ecosystems reveal the importance of body size in determining trophic parti- receive the anterior coronoid fang, which bites mesial to the edge of the dermopalatine and tioning and diversity among predators. We established relationships between body sizes of is received by a pit in that bone. The fenestra endochoanalis is partly floored by the vomer extant cetaceans and their prey in order to infer prey size and potential trophic separation of and the dermopalatine, restricting the choana to the lateral part of the fenestra. -
Cryptic Phylogeographic History Sheds Light on the Generation of Species Diversity in Sky-Island Mountains
bioRxiv preprint doi: https://doi.org/10.1101/199786; this version posted October 7, 2017. The copyright holder for this preprint (which was not certified by peer review) is the author/funder, who has granted bioRxiv a license to display the preprint in perpetuity. It is made available under aCC-BY-NC-ND 4.0 International license. Cryptic phylogeographic history sheds light on the generation of species diversity in sky-island mountains Kai He1, 2, 3, #, Tao Wan 1, 4, Klaus-Peter Koepfli 5, 6, Wei Jin7, Shao-Ying Liu7, Xue-Long Jiang1, # 1 State Key Laboratory of Genetic Resources and Evolution, Kunming Institute of Zoology, Chinese Academy of Sciences, Kunming, Yunnan 650223, China 2 Department of Biological Sciences, University of Manitoba, Winnipeg, MN R3T R3V, Canada 3 The Kyoto University Museum, Kyoto University, Kyoto 606-8501, Japan. 4 Kunming College of Life Science, University of Chinese Academy of Sciences, Kunming, Yunnan 650223, China 5 Smithsonian Conservation Biology Institute, National Zoological Park, DC 20008, USA 6 Theodosius Dobzhansky Center for Genome Bioinformatics, Saint Petersburg State University, St. Petersburg 199034, RUSSIA 7 Sichuan Academy of Forest, Chengdu 610081, Sichuan, China Keywords: allopatry, Approximate Bayesian Computation, cryptic corridor, interglacial refugia, niche modeling, species delimitation Running title: Cryptic sky-island phylogeography # Correspondence: Kai He and Xue-Long Jiang, Fax: 86 871 6512 5226; E-mails: [email protected], [email protected] 1 bioRxiv preprint doi: https://doi.org/10.1101/199786; this version posted October 7, 2017. The copyright holder for this preprint (which was not certified by peer review) is the author/funder, who has granted bioRxiv a license to display the preprint in perpetuity. -
Interglacial Refugia Preserved High Genetic Diversity of the Chinese Mole Shrew in the Mountains of Southwest China
Heredity (2016) 116, 23–32 & 2016 Macmillan Publishers Limited All rights reserved 0018-067X/16 www.nature.com/hdy ORIGINAL ARTICLE Interglacial refugia preserved high genetic diversity of the Chinese mole shrew in the mountains of southwest China KHe1,2, N-Q Hu1,3, X Chen4,5, J-T Li6 and X-L Jiang1 The mountains of southwest China (MSC) harbor extremely high species diversity; however, the mechanism behind this diversity is unknown. We investigated to what degree the topography and climate change shaped the genetic diversity and diversification in these mountains, and we also sought to identify the locations of microrefugia areas in these mountains. For these purposes, we sampled extensively to estimate the intraspecific phylogenetic pattern of the Chinese mole shrew (Anourosorex squamipes)in southwest China throughout its range of distribution. Two mitochondrial genes, namely, cytochrome b (CYT B) and NADH dehydrogenase subunit 2 (ND2), from 383 archived specimens from 43 localities were determined for phylogeographic and demographic analyses. We used the continuous-diffusion phylogeographic model, extensive Bayesian skyline plot species distribution modeling (SDM) and approximate Bayesian computation (ABC) to explore the changes in population size and distribution through time of the species. Two phylogenetic clades were identified, and significantly higher genetic diversity was preserved in the southern subregion of the mountains. The results of the SDM, continuous-diffusion phylogeographic model, extensive Bayesian skyline plot and ABC analyses were congruent and supported that the Last Interglacial Maximum (LIG) was an unfavorable period for the mole shrews because of a high degree of seasonality; A. squamipes survived in isolated interglacial refugia mainly located in the southern subregion during the LIG and rapidly expanded during the last glacial period. -
Fossil Micromammals of the Early Pliocene Locality of Almenara MB: Biostratigraphical and Palaeoecological Implications
SPANISH JOURNAL OF PALAEONTOLOGY Fossil micromammals of the early Pliocene locality of Almenara MB: biostratigraphical and palaeoecological implications Samuel MANSINO1,2*, Vicente Daniel CRESPO1,2, María LÁZARO1, Francisco Javier RUIZ- SÁNCHEZ1,2,3, Juan ABELLA3,4 & Plinio MONTOYA1 1 Departament de Geologia, Universitat de València, Doctor Moliner 50, 46100 Burjassot, Spain; [email protected]; [email protected]; [email protected]; [email protected], [email protected] [email protected] 2 Museu Valencià d’Història Natural, L’Hort de Feliu, P.O. Box 8460, 46018 Alginet, Valencia, Spain 3 INCYT-UPSE, Universidad Estatal Península de Santa Elena, 7047, Santa Elena, Ecuador 4 Institut Català de Paleontologia Miquel Crusafont, Universitat Autònoma de Barcelona, Edifi ci ICTA-ICP, Carrer de les Columnes s/n, Campus de la UAB, Cerdanyola del Vallès, 08193 Barcelona, Spain * Corresponding author Mansino, S., Crespo, V.D., Lázaro, M., Ruiz-sánchez, F.J., Abella, J. & Montoya, P. 2016. Fossil micromammals of the early Pliocene locality of Almenara MB: biostratigraphical and palaeoecological implications. [Micromamíferos fósiles de la localidad del Plioceno inferior de Almenara MB: implicaciones bioestratigráfi cas y paleoecológicas]. Spanish Journal of Palaeontology, 31 (2), 253-270. Manuscript received 20 October 2015 © Sociedad Española de Paleontología ISSN 2255-0550 Manuscript accepted 04 March 2016 ABSTRACT RESUMEN In this work, we have studied the fossil rodent, insectivore En este trabajo hemos estudiado los roedores, insectívoros and chiropteran faunas, of a new locality from the Almenara- y quirópteros fósiles de una nueva localidad del complejo Casablanca karstic complex, named ACB MB (Castellón, kárstico de Almenara-Casablanca, denominada ACB east Spain). -
Late Miocene Soricidae (Mammalia) Fauna from Tardosbánya (Western Hungary)
Hantkeniana 2, 103-125 (1998) Budapest Late Miocene Soricidae (Mammalia) fauna from Tardosbánya (Western Hungary) Lukács Gy. MÉszÁRos Eötvös Loránd University, Department ofPalaeontology H-I083 Budapest, Ludovika tér 2, Hungary (Wi th 5 figures, 6 tables and 4 plates) The Soricidae (Mamrnalia, Insectivora) elements of the rich and well preserved fossil vertebrate fauna from Tardosbánya limestone quarry (Western Hungary, Gerecse Mountains) are presented. Five species could have been identified from the material: Amblycoptus oligodon KORMOS 1926, Crusafontina konnosi (BACHMAYER& WILSON, 1970), Blarinella dubia (BACHMAYERand WILSON, 1970), Episoricuius gibberodon (PETÉNYI, 1864) and Paenelimnoecus repenningi (BACHMAYER & WILSON, 1970). The occurrence of Crusafantina, B. dubia and P. repenningi indicates that the age of the sarnple is Late Miocene. The morphometrical studies on C. konnosi, and the morphology and the low relative frequency of A. oligodon suggest that the fauna is correlative with the Turolian MN 12 Zone. The occurrence of A. oligodon, C. konnosi and E. gibberodon indicates well watered, forested environment. Introduction The Late Miocene vertebrate fauna from Tardosbánya quarry was colleeted by D. JÁNOSSY Locality (Hungarian Natural History Museum) in 1975. He gave a prelinúnary faunal list of the sample (1981, Tardosbánya is situated at the northern margin only in manuscript form) and deposited the material of the Transdanubian Central Range (Western in the Geological Museum of Hungary (GMH) (in Hungary), about 10 km north from Tatabánya (see the Geological Institute of Hungary). JÁNOSSYlisted Fig. 1). The remains have been found in a sediment- the following soricids: filled fossil shaft in the Jurassic limestone of the Gerecse Mountains, excavated by exploitation in the - "Petenyia" "red marble" quarry near Tardosbánya. -
Controlling the Eastern Mole
Agriculture and Natural Resources FSA9095 Controlling the Eastern Mole Dustin Blakey Introduction known about the Eastern Mole, and County Extension Agent successful control in landscapes Agriculture Few things in this world are requires a basic understanding of more frustrating than spending valu their biology. able time and money on a landscape Rebecca McPeake only to have it torn up by wildlife. Mole Biology Associate Professor and Moles’ underground habits aerate the Extension Wildlife soil and reduce grubs, but their Moles spend most of their lives Specialist digging is cause for homeowner underground feeding on invertebrate complaints, making them one of the animals living in the soil. A mole’s most destructive mammals that can diet sharply reflects the diversity of inhabit our landscapes. the fauna found in its environment. In Arkansas, moles primarily feed on earthworms, grubs and other inverte brates. Moles lack the dental struc ture to chew plant material (seeds, roots, etc.) for food and, as a result, subsist strictly as carnivores. Occasionally moles will cut surface vegetation and bring it down to their nest, as bedding, but this is not eaten. Figure 1. Rarely seen on the surface, moles are uniquely designed for their underground existence. Photo printed with permission by Ann and Rob Simpson. Contrary to popular belief, moles are not rodents. Mice, squirrels and gophers are all rodents. Moles are insectivores in the family Talpidae. Figure 2. Moles lack the dental structure This animal family survives by to chew plant material and subsist feeding on invertebrate prey. There mostly on earthworms and other invertebrates. are seven species of moles in North America, but the Eastern Mole Moles are well-adapted to living (Scalopus aquaticus L.) is the species underground. -
Mammals of Jordan
© Biologiezentrum Linz/Austria; download unter www.biologiezentrum.at Mammals of Jordan Z. AMR, M. ABU BAKER & L. RIFAI Abstract: A total of 78 species of mammals belonging to seven orders (Insectivora, Chiroptera, Carni- vora, Hyracoidea, Artiodactyla, Lagomorpha and Rodentia) have been recorded from Jordan. Bats and rodents represent the highest diversity of recorded species. Notes on systematics and ecology for the re- corded species were given. Key words: Mammals, Jordan, ecology, systematics, zoogeography, arid environment. Introduction In this account we list the surviving mammals of Jordan, including some reintro- The mammalian diversity of Jordan is duced species. remarkable considering its location at the meeting point of three different faunal ele- Table 1: Summary to the mammalian taxa occurring ments; the African, Oriental and Palaearc- in Jordan tic. This diversity is a combination of these Order No. of Families No. of Species elements in addition to the occurrence of Insectivora 2 5 few endemic forms. Jordan's location result- Chiroptera 8 24 ed in a huge faunal diversity compared to Carnivora 5 16 the surrounding countries. It shelters a huge Hyracoidea >1 1 assembly of mammals of different zoogeo- Artiodactyla 2 5 graphical affinities. Most remarkably, Jordan Lagomorpha 1 1 represents biogeographic boundaries for the Rodentia 7 26 extreme distribution limit of several African Total 26 78 (e.g. Procavia capensis and Rousettus aegypti- acus) and Palaearctic mammals (e. g. Eri- Order Insectivora naceus concolor, Sciurus anomalus, Apodemus Order Insectivora contains the most mystacinus, Lutra lutra and Meles meles). primitive placental mammals. A pointed snout and a small brain case characterises Our knowledge on the diversity and members of this order. -
The Genome of the Pyrenean Desman and the Effects of Bottlenecks and Inbreeding on the Genomic Landscape of an Endangered Species
Received: 18 August 2020 | Revised: 19 March 2021 | Accepted: 27 April 2021 DOI: 10.1111/eva.13249 ORIGINAL ARTICLE The genome of the Pyrenean desman and the effects of bottlenecks and inbreeding on the genomic landscape of an endangered species Lídia Escoda | Jose Castresana Institute of Evolutionary Biology (CSIC- Universitat Pompeu Fabra), Barcelona, Spain Abstract The Pyrenean desman (Galemys pyrenaicus) is a small semiaquatic mammal endemic Correspondence Jose Castresana, Institute of Evolutionary to the Iberian Peninsula. Despite its limited range, this species presents a strong ge- Biology (CSIC- Universitat Pompeu Fabra), netic structure due to past isolation in glacial refugia and subsequent bottlenecks. Passeig Marítim de la Barceloneta 37, 08003 Barcelona, Spain. Additionally, some populations are highly fragmented today as a consequence of river Email: [email protected] barriers, causing substantial levels of inbreeding. These features make the Pyrenean Funding information desman a unique model in which to study the genomic footprints of differentiation, Plan Nacional I+D+i del Ministerio de bottlenecks and extreme isolation in an endangered species. To understand these Ciencia e Innovación, Grant/Award Number: CGL2017- 84799- P (MINECO/AEI/FEDER, UE) processes, the complete genome of the Pyrenean desman was sequenced and as- sembled using a Bloom filter- based approach. An analysis of the 1.83 Gb reference genome and the sequencing of five additional individuals from different evolutionary units allowed us to detect its main genomic characteristics. The population differen- tiation of the species was reflected in highly distinctive demographic trajectories. In addition, a severe population bottleneck during the postglacial recolonization of the eastern Pyrenees created one of the lowest genomic heterozygosity values recorded in a mammal. -
Chapter 1 - Introduction
EURASIAN MIDDLE AND LATE MIOCENE HOMINOID PALEOBIOGEOGRAPHY AND THE GEOGRAPHIC ORIGINS OF THE HOMININAE by Mariam C. Nargolwalla A thesis submitted in conformity with the requirements for the degree of Doctor of Philosophy Graduate Department of Anthropology University of Toronto © Copyright by M. Nargolwalla (2009) Eurasian Middle and Late Miocene Hominoid Paleobiogeography and the Geographic Origins of the Homininae Mariam C. Nargolwalla Doctor of Philosophy Department of Anthropology University of Toronto 2009 Abstract The origin and diversification of great apes and humans is among the most researched and debated series of events in the evolutionary history of the Primates. A fundamental part of understanding these events involves reconstructing paleoenvironmental and paleogeographic patterns in the Eurasian Miocene; a time period and geographic expanse rich in evidence of lineage origins and dispersals of numerous mammalian lineages, including apes. Traditionally, the geographic origin of the African ape and human lineage is considered to have occurred in Africa, however, an alternative hypothesis favouring a Eurasian origin has been proposed. This hypothesis suggests that that after an initial dispersal from Africa to Eurasia at ~17Ma and subsequent radiation from Spain to China, fossil apes disperse back to Africa at least once and found the African ape and human lineage in the late Miocene. The purpose of this study is to test the Eurasian origin hypothesis through the analysis of spatial and temporal patterns of distribution, in situ evolution, interprovincial and intercontinental dispersals of Eurasian terrestrial mammals in response to environmental factors. Using the NOW and Paleobiology databases, together with data collected through survey and excavation of middle and late Miocene vertebrate localities in Hungary and Romania, taphonomic bias and sampling completeness of Eurasian faunas are assessed. -
Zootaxa, a New Species of Crocidura (Soricomorpha: Soricidae) From
Zootaxa 2345: 60–68 (2010) ISSN 1175-5326 (print edition) www.mapress.com/zootaxa/ Article ZOOTAXA Copyright © 2010 · Magnolia Press ISSN 1175-5334 (online edition) A new species of Crocidura (Soricomorpha: Soricidae) from southern Vietnam and north-eastern Cambodia PAULINA D. JENKINS1, ALEXEI V. ABRAMOV2,4, VIATCHESLAV V. ROZHNOV3,4 & ANNETTE OLSSON5 1The Natural History Museum, Cromwell Road, London SW7 5BD, UK. E-mail: [email protected] 2Zoological Institute, Russian Academy of Sciences, Universitetskaya nab., 1, Saint-Petersburg, 199034, Russia. E-mail: [email protected] 3A.N. Severtsov Institute of Ecology and Evolution, Russian Academy of Sciences, Leninskii pr., 33, Moscow, 119071, Russia. E-mail: [email protected] 4Joint Vietnam-Russian Tropical Research and Technological Centre, Nguyen Van Huyen, Nghia Do, Cau Giay, Hanoi, Vietnam. E-mail: [email protected] 5Conservation International – Cambodia Programme, P.O. Box 1356, Phnom Penh, Cambodia. E-mail: [email protected] Abstract Knowledge of the Soricidae occurring in Vietnam has recently expanded with the discovery of several species previously unknown to science. Here we describe a new species of white-toothed shrew belonging to the genus Crocidura from lowland areas in southern Vietnam and from a river valley in north-eastern Cambodia. This small to medium sized species is diagnosed on the basis of external features, cranial proportions and morphology of the last upper and lower molars. Comparisons are made with other species of Crocidura known to occur in Vietnam and the biogeography of the regions where the new species has been found, is briefly discussed. Key words: white-toothed shrew, Vietnam, Cambodia Introduction Knowledge of the soricid fauna of South-East Asia and particularly that of Vietnam is still poorly understood, while that of Cambodia is virtually unknown (Jenkins, 1982; Heaney & Timm, 1983; Jenkins & Smith, 1995; Motokawa et al., 2005; Jenkins et al., 2009). -
Checklist of Rodents and Insectivores of the Mordovia, Russia
ZooKeys 1004: 129–139 (2020) A peer-reviewed open-access journal doi: 10.3897/zookeys.1004.57359 RESEARCH ARTICLE https://zookeys.pensoft.net Launched to accelerate biodiversity research Checklist of rodents and insectivores of the Mordovia, Russia Alexey V. Andreychev1, Vyacheslav A. Kuznetsov1 1 Department of Zoology, National Research Mordovia State University, Bolshevistskaya Street, 68. 430005, Saransk, Russia Corresponding author: Alexey V. Andreychev ([email protected]) Academic editor: R. López-Antoñanzas | Received 7 August 2020 | Accepted 18 November 2020 | Published 16 December 2020 http://zoobank.org/C127F895-B27D-482E-AD2E-D8E4BDB9F332 Citation: Andreychev AV, Kuznetsov VA (2020) Checklist of rodents and insectivores of the Mordovia, Russia. ZooKeys 1004: 129–139. https://doi.org/10.3897/zookeys.1004.57359 Abstract A list of 40 species is presented of the rodents and insectivores collected during a 15-year period from the Republic of Mordovia. The dataset contains more than 24,000 records of rodent and insectivore species from 23 districts, including Saransk. A major part of the data set was obtained during expedition research and at the biological station. The work is based on the materials of our surveys of rodents and insectivo- rous mammals conducted in Mordovia using both trap lines and pitfall arrays using traditional methods. Keywords Insectivores, Mordovia, rodents, spatial distribution Introduction There is a need to review the species composition of rodents and insectivores in all regions of Russia, and the work by Tovpinets et al. (2020) on the Crimean Peninsula serves as an example of such research. Studies of rodent and insectivore diversity and distribution have a long history, but there are no lists for many regions of Russia of Copyright A.V.