Exploring the role of C5a-C5aR1 signalling in development through pluripotent stem cell modelling

Owen Hawksworth

BSc (Hons)

A thesis submitted for the degree of Doctor of Philosophy at

The University of Queensland in 2017

Faculty of Medicine Abstract The has been traditionally described as a powerful controller of innate immunity. With activation through the recognition of pathogenic surfaces, spontaneous hydrolysis, or extrinsic cleavage, a cleavage cascade is initiated culminating in the formation of the active complement fragments , , C5a, and C5b. These fragments direct immune cells to sites of , as well as tagging pathogens for destruction and directly lysing foreign cells. It is now clear however, that this complex family of possesses a wide range of functions outside of immune regulation. From fertilisation and morphogenesis, to the control of foetal and adult stem cell populations, studies have described novel actions of complement factors. This thesis is focussed on the central complement , C5aR1. Traditionally described as a potent activating and chemotactic receptor for immune cells, C5aR1 has been shown to function in a number of non- immune cell populations. Of note, our laboratory has previously described a role for C5aR1 in neural tube closure, with loss of C5aR1 signalling associated with increased neural tube defects under folate deficient conditions. However, a mechanistic role of C5aR1 at this stage of development was not described.

In this thesis, pluripotent stem cells were utilised as an in vitro model of human development to interrogate the expression and function of C5aR1 at a number of developmental stages. Specifically, in pluripotent stem cells representative of the blastocyst inner cell mass, in neural rosettes representative of the developing ventricular zone, and in matured post-mitotic cortical neurons. This builds on previous work by our laboratory, which had identified C5aR1 actions in the mouse ventricular zone, analogous to late neural rosette cultures, and had shown a neurotoxic effect of C5aR1 in post-mitotic mouse neurons.

C5aR1 was found to be expressed in pluripotent stem cells, with a role in promoting maintenance of pluripotency in the absence of FGF2 signalling. Additionally, C5aR1 was found to be apically expressed in human neural rosettes, with signalling promoting proliferation and maintenance of cell polarity. This work correlated well with mouse studies performed outside of this thesis, to show that in vivo, loss of C5aR1 in this neural progenitor population resulted in behavioural deficits and microstructural brain changes. Lastly, we determined the mRNA expression of C5aR1 in human post- mitotic cortical neurons. However, in contrast to previous mouse studies, exogenous C5a, alone or in the presence of secondary stressors, had little effect on the survival of these cells.

Overall, the results presented in this thesis have further expanded our knowledge of C5a-C5aR1 signalling in development, describing novel roles for this signalling pathway. The use of pluripotent stem cells allowed for the exploration of C5aR1 actions in human development that would otherwise be limited to animal models. Additionally, it allowed for the correlation of previous animal results to

ii a human cell type, with both inter-species conservation of function, and discordance, identified. Additionally, the use of pluripotent stem cell modelling has provided a useful platform for the future study of complement in both development and disease. This work has direct implications to the clinical environment, highlighting the important developmental roles of C5aR1, and how modulation of C5aR1 signalling to target complement driven disease could have detrimental effects on foetal development.

iii Declaration by author

This thesis is composed of my original work, and contains no material previously published or written by another person except where due reference has been made in the text. I have clearly stated the contribution by others to jointly-authored works that I have included in my thesis.

I have clearly stated the contribution of others to my thesis as a whole, including statistical assistance, survey design, data analysis, significant technical procedures, professional editorial advice, and any other original research work used or reported in my thesis. The content of my thesis is the result of work I have carried out since the commencement of my research higher degree candidature and does not include a substantial part of work that has been submitted to qualify for the award of any other degree or diploma in any university or other tertiary institution. I have clearly stated which parts of my thesis, if any, have been submitted to qualify for another award.

I acknowledge that an electronic copy of my thesis must be lodged with the University Library and, subject to the policy and procedures of The University of Queensland, the thesis be made available for research and study in accordance with the Copyright Act 1968 unless a period of embargo has been approved by the Dean of the Graduate School.

I acknowledge that copyright of all material contained in my thesis resides with the copyright holder(s) of that material. Where appropriate I have obtained copyright permission from the copyright holder to reproduce material in this thesis.

iv Publications During Candidature

Journal Articles Hawksworth OA, Coulthard LG, Woodruff TM (2016) Complement in the fundamental processes of the cell Molecular Immunology 84; 17-25

Hawksworth OA, Xiang L, Coulthard LG, Wolvetang EJ & Woodruff TM (2017) New concepts on the therapeutic control of terminal complement receptors Molecular Immunology Epub ahead of print

Hawksworth OA, Coulthard LG, Taylor SM, Wolvetang EJ & Woodruff TM (2014) Complement C5a promotes human embryonic stem cell pluripotency in the absence of FGF2 Stem Cells 32 (12); 3278-3284

Coulthard LG, Hawksworth OA, Li R, Balachandran A, Lee JD, Sepehrband F, Kurniawan N, Jeanes A, Simmons DG, Wolvetang EJ & Woodruff TM (2017) Complement C5aR1 Signaling Promotes Polarization and Proliferation of Embryonic Neural Progenitor Cells through PKCζ Journal of Neuroscience 37 (22); 5395-5407

Bellows-Peterson ML, Fung HK, Floudas CA, Kieslich CA, Zhang L, Morikis D, Wareham KJ, Monk PN, Hawksworth OA, Woodruff TM (2012) De novo peptide design with and antagonist activities: theoretical predictions and experimental validation Journal of Medicinal Chemistry 55 (9); 4159-68

Reports Hawksworth OA, Coulthard LG & Woodruff TM (2013) Complement peptide receptors: C3a receptor. International Union of Basic and Clinical Pharmacology Database. http://www.guidetopharmacology.org/GRAC/ObjectDisplayForward?objectId=31

Coulthard LG, Hawksworth OA & Woodruff TM (2013) Complement peptide receptors: . International Union of Basic and Clinical Pharmacology Database. http://www.guidetopharmacology.org/GRAC/ObjectDisplayForward?objectId=32

Hawksworth OA, Woodruff TM (2016) Flash News: Complement and microglia mediate early synapse loss in Alzheimer mouse models Focus in Complement 43; 2

v Book Chapters

Coulhard LG, Hawksworth OA, Woodruff TM “Chapters: C3aR, C5aR1, and C5aR2” The Complement FactsBook 2nd edition, S. Barnum & T. Schein (Ed.) Academic Press, October 2017

International Conference Abstracts

Hawksworth OA, Coulthard LGJ, Taylor SM, Wolvetang EJ & Woodruff TM (2012) Expression of complement factors and functional C5a receptors in human embryonic stem cells and induced pluripotent stem cells Immunobiology 217 (11), 1169

Presented at the 24th International Complement Workshop, Chania, Crete, Greece

Winner Aegean Conference Trainee Award (2012)

vi Publications Included in this Thesis

Chapter 1 Hawksworth OA, Coulthard LG, Woodruff TM (2016) Complement in the fundamental processes of the cell Molecular Immunology 84; 17-25

Contributor Statement of Contribution Hawksworth OA Researched the paper (100%) Wrote the paper (95%) Coulthard LG Wrote and edited the paper (5%) Woodruff TM Edited the paper (100%)

Hawksworth OA, Xiang L, Coulthard LG, Wolvetang EJ & Woodruff TM (2017) New concepts on the therapeutic control of terminal complement receptors Molecular Immunology Epub ahead of print

Contributor Statement of Contribution Hawksworth OA Researched the paper (95%) Wrote the paper (95%) Xiang L Researched and wrote the paper (5%) Coulthard LG Edited the paper (25%) Wolvetang EJ Edited the paper (25%) Woodruff TM Edited the paper (50%)

Chapter 2

Hawksworth OA, Coulthard LG, Taylor SM, Wolvetang EJ & Woodruff TM (2014) Complement C5a promotes human embryonic stem cell pluripotency in the absence of FGF2 Stem Cells 32 (12); 3278-3284

Contributor Statement of Contribution Hawksworth OA Performed the experiments (100%) Analysed the data (95%) Wrote the paper (80%) Coulthard LG Analysed the data (5%) Edited the paper Taylor SM Edited the paper and intellectual input (20%) Wolvetang EJ Edited the paper and intellectual input (40%) Woodruff TM Edited the paper and intellectual input (40%)

vii Chapter 3 Coulthard LG*, Hawksworth OA*, Li R, Balachandran A, Lee JD, Sepehrband F, Kurniawan N, Jeanes A, Simmons DG, Wolvetang EJ & Woodruff TM (2017) Complement C5aR1 Signaling Promotes Polarization and Proliferation of Embryonic Neural Progenitor Cells through PKCζ Journal of Neuroscience 37 (22); 5395-5407

*These authors contributed equally Contributor Statement of Contribution Hawksworth OA Performed and analysed the human experiments (100%) Wrote the paper (75%) Coulthard LG Performed and analysed the mouse experiments (90%) Wrote the paper (25%) Li R Mouse behavioural analysis (100%) Balachandran A Technical and analytical support (100%) Lee JD Performed mouse ELISA experiments (100%) Sepehrband F Performed mouse MRI experiments (50%) Kurniawan N Performed mouse MRI experiments (50%) Jeanes A Intellectual input (5%) Simmons DG Edited the paper and intellectual input (10%) Wolvetang EJ Edited the paper and intellectual input (40%) Woodruff TM Edited the paper and intellectual input (50%)

viii Contributions by others to the thesis

In addition to the contributions of research paper co-authors as listed above, I acknowledge the contributions of Associate Professor Trent Woodruff and Professor Ernst Wolvetang in reviewing and editing parts of this thesis.

Statement of parts of the thesis submitted to qualify for the award of another degree

None

ix Acknowledgements

From the beginning of my PhD in the Woodruff laboratory, to my gradual infiltration of the Wolvetang group, I have had the opportunity to meet a number of excellent colleagues and friends. Without them my 5½ years (concurrent MBBS study, not laziness!) of study would have not been the frankly amazing experience that it was.

Firstly, I would like to thank my principal supervisors, A/Prof Trent Woodruff and Prof Enrst Wolvetang. Both of you have guided and educated me immensely, and the combined education with Trent’s guidance and Ernst’s passion provided me with excellent supervision to complete my studies. Extra thank you to Steve, hope you’re not missing research in-between the chillies and home-brew.

Thank you to the original Woodruff/Taylor group members who have long left especially Mike, Pep, Liam, and Patrick, for all your support in and out of the lab and making it a fun place to be; and thank you to the new ones who have kept the lab interesting throughout my ever dwindling visits, especially Rui, Sammy, Vinod, and Vandana. Thank you as well to the Wolvetangs and Coopies past and present, in particular Nilay for all his wisdom which I, to my detriment, often ignored (and will continue to!) and Anu, the best desk buddy one could hope for.

To Liam, you were a horrible honours supervisor, but a great PhD colleague and friend. And Patrick, a great honours partner, whom without I would have been consumed by my sedentary propensity.

To my family, thank you for all your support and patience in waiting for me to finally get a real job!

Finally, Ilaria, my sugar-mamma. The best thing to come out of my PhD. Thank you for all your love and support, I’m looking forward to regaining some weekends and our post-PhD adventures together.

x Keywords

Complement, C5a, C5aR1, development, pluripotent stem cell, neurogenesis, brain development

Australian and New Zealand Standard Research Classifications (ANZSRC)

060103 Cell Development, Proliferation and Death, 50%

110707 Innate Immunity, 25%

110903 Central Nervous System, 25%

Fields of Research (FoR) Classification

0601 Biochemistry and Cell Biology, 50%

1107 Immunology, 25%

1109 Neurosciences, 25%

xi Table of Contents

Abstract ...... ii Declaration by Author ...... iv Publications during candidature ...... v Publications included in this thesis ...... vii Contributions by others to this thesis ...... ix Statement of parts of this thesis submitted to qualify for the award of another degree ...... ix Acknowledgements ...... x Keywords ...... xi Australia and New Zealand Standard Research Classifications ...... xi Fields of Research Classifications ...... xi List of Tables and Figures ...... xv List of Abbreviation’s ...... xvii

Chapter 1: Introduction ...... 1 1.1 Introduction ...... 1 1.2 The Complement System ...... 2 Abstract ...... 3 Introduction ...... 4 Complement in basic cell processes ...... 6 Migration ...... 6 Adhesion ...... 7 Morphogenesis ...... 8 Proliferation ...... 9 Survival ...... 14 Synaptic Pruning ...... 15 Summary ...... 17 References ...... 18 1.3 C5aR1 ...... 28 Signalling ...... 28 Ligands ...... 28 Function ...... 29 References ...... 31 1.4 Pharmacological Modulators of Signalling ...... 34 Abstract ...... 35 Introduction ...... 36

xii Inhibitors of C5/C5a ...... 38 Inhibitors of C5aR1 ...... 41 Targeting C3aR ...... 44 Targeting of C5aR2 ...... 45 The future of anaphylatoxin targeted therapeutics ...... 47 References ...... 49 1.5 Pluripotent Stem Cells ...... 57 Introduction ...... 57 Neural differentiation of PSSCs ...... 58 References ...... 60

Chapter 2: C5a Signalling in Pluripotent Stem Cells ...... 62 Abstract ...... 63 Introduction ...... 64 Materials & Methods ...... 65 Results and Discussion ...... 68 Conclusion ...... 74 References ...... 75

Chapter 3: C5aR1 in the control of Embryonic Neural Progenitor Cells ...... 78 Abstract ...... 79 Introduction ...... 80 Materials & Methods ...... 82 Results ...... 89 Discussion ...... 101 References ...... 104

Chapter 4: C5aR1 in Pluripotent Stem Cell derived Neurons ...... 109 Introduction ...... 109 Metabolism and Cell Survival ...... 109 Complement in Metabolic Regulation ...... 110 C5a signalling in post-mitotic neurons ...... 111 Materials & Methods ...... 112 Results ...... 114 Discussion ...... 120 References ...... 124

xiii

Chapter 5: Discussion and Concluding Remarks ...... 128 Introduction ...... 128 C5aR1 in the developing brain ...... 129 Therapeutic implications of C5a-C5aR1 inhibition ...... 130 PPSCs for the study of complement ...... 131 Conclusion ...... 133 References ...... 135

xiv List of Tables and Figures

Chapter 1: Introduction

Figure 1.2.1 The Complement Cascade Figure 1.2.2 Complement control of migration, adhesion, and morphogenesis Figure 1.2.3 Complement control of proliferation, survival, and synaptic pruning Figure 1.3.1 Dose response curves for human C5a and PMX53 Figure 1.4.1 The complement cascade and drugs available for targeting terminal signalling Table 1.4.1 Clinical Trials of Table 1.4.2 Phase II/III clinical trials of C5a-C5aR1 targeted therapeutics under active development Figure 1.5.1 Differentiation of hPSCs to neurons

Chapter 2: C5a Signalling in Pluripotent Stem Cells

Figure 2.1 Expression of complement factors C5, C5aR and C5L2 on hESC and hiPSC Figure 2.2 C5a receptor activation results in transient phosphorylation of ERK and AKT signalling proteins in the hESC line, H9 Figure 2.3 C5a promotes pluripotency in hESC in the absence of FGF2 Figure 2.4 C5a increases cell number following single cell dissociation of hESC

Chapter 3: C5aR1 in the control of Embryonic Neural Progenitor Cells

Table 3.1 List of PCR primer sequences and conditions Table 3.2 Table of MRI volume comparison of brain regions for C5aR1-antagonist or vehicle treated mice Figure 3.1 Localisation of C5aR1 and ligands Figure 3.2 Expression of C5aR1 in human embryonic stem cell-derived rosettes Figure 3.3 C5aR1 signals through PKCζ to maintain cell polarity in vitro

xv Figure 3.4 C5aR1 signaling alters neural progenitor division planes and proliferation in vivo Figure 3.5 Blockade of C5aR1 signaling at E12.5-14.5 causes behavioral changes in adult mice Figure 3.6 Blockade of C5aR1 signaling at E12.5-14.5 results in microstructural changes in adult brains

Chapter 4: C5aR1 in Pluripotent Stem Cell derived Neurons

Figure 4.1 hESC derived neuronal differentiation Figure 4.2 C5a is not toxic to C5AR1 expressing neurons Figure 4.3 C5a does not affect cell survival in the presence of apoptotic inducers Figure 4.4 Metabolic capacity of hPSC derived neurons

xvi List of Abbreviations

C Complement factor GFAP Glial fibrillary acidic aHUS Atypical hemolytic-uremic GPCR G-protein coupled receptor syndrome hESC Human embryonic stem cell AKT Protein kinase B hiPSC Human induced pluripotent stem Astrocyte-neuron lactate shuttle ANLS cell ATP Adenosine triphosphate HMEC- human microvascular endothelial 1 cell Aβ Amyloid beta IAM Inner acrosomal membrane bad Bcl-2-associated death promoter IGL Internal granule layer bak Bcl-2 homologous antagonist/killer MAC Membrane attack complex bax Bcl-2-like protein 4 MAPK Mitogen-activated protein kinases bcl-2 B-cell lymphoma 2 MASP Mannan-binding lectin serine bFGF basic fibroblast growth factor protease BM Bone Marrow MRI Magnetic resonance imaging C3aR Complement factor 3a Receptor MSC Mesenchymal stem cell C5a Complement factor 5a NCAD Neural-type cadherin C5aR1 Complement factor 5a Receptor 1 NCC Neural crest cell C5aR2 Complement factor 5a Receptor 2 NFkB Nuclear factor kappa--chain- enhancer of activated B cells C5L2 Complement factor 5a Receptor 2 NPC Neural progenitor cell CD Cluster of differentiation OCR Oxygen consumption rate CNS Central nervous system PCR Polymerase chain reaction CPC Cardiac progenitor cell pfkfb3 6-phosphofructo-2-kinase/fructose- Crry CR1-related Y 2,6-biphosphatase 3 PI3K Phosphoinositide 3-kinase CSF Cerebrospinal fluid PKC Protein kinase C CTB Cytotrophoblast PKCζ Protein kinase C zeta DCX Doublecortin PNH Paroxysmal nocturnal ECAR Extracellular acidification rate hemoglobinuria EGL External granule layer PPSC Pluripotent stem cell ERK Extracellular signal related kinases ROS Reactive oxygen species FCCP Carbonyl cyanide-4- TUBB3 Tubulin beta-3 chain (trifluoromethoxy)phenylhydrazone ZO-1 Zona occludens 1

xvii 1.1 Introduction

This chapter presents an overview of the topics relevant to this thesis. This includes subsections of work published as reviews, and on specific topics relevant to this thesis. Together, these sections help to introduce the complement system, C5a-C5aR1, and pluripotent stem cells and neuronal modelling. Section 1.2 provides an introduction to the complement system, and the actions of this signalling family outside of their traditional roles in immunity. This includes roles in cell survival, proliferation, and migration, highlighting the diverse nature of complement. Section 1.3 briefly introduces the receptor C5aR1, the main receptor of interest in this thesis. Section 1.4 provides an overview of pharmacological tools targeting both C5a and C3a signalling. This section gives an important overview of the broad therapeutic applications of C5a-C5aR1 modulation currently under investigation. With targeting of C5a- C5aR1 signalling proposed for a number of disorders, the investigation for physiological actions of this receptor is needed to understand the potential consequences of receptor inhibition. Lastly, section 1.5 provides an introduction to pluripotent stem cells, and their use as a tool for the study of complement and human neuronal modelling.

1 1.2 The Complement System

Complement in the fundamental processes of the cell Owen A. Hawksworth1,2, Liam G. Coulthard3,4, Trent M. Woodruff1

1School of Biomedical Sciences, The University of Queensland, St Lucia, Brisbane, QLD, 4072, Australia

2Australian Institute for Bioengineering & Nanotechnology, The University of Queensland, St. Lucia, Brisbane, QLD, 4072, Australia

3School of Medicine, University of Queensland, Herston, Australia

4Royal Brisbane and Women’s Hospital, Herston, Australia

Published in Molecular Immunology

2 Abstract

Once regarded solely as an activator of innate immunity, it is now clear that the complement system acts in an assortment of cells and tissues, with immunity only one facet of a diverse array of functions under the influence of the complement proteins. Throughout development, complement activity has now been demonstrated from early sperm-egg interactions in fertilisation, to regulation of epiboly and organogenesis, and later in refinement of cerebral synapses. Complement has also been shown to regulate homeostasis of adult tissues, controlling cell processes such as migration, survival, repair, and regeneration. Given the continuing emergence of such novel actions of complement, the existing research likely represents only a fraction of the myriad of functions of this complex family of proteins. This review is focussed on outlining the current knowledge of complement family members in the regulation of cell processes in non-immune systems.

3 Introduction

The complement system has long been regarded as the effector arm of innate immunity. After initial activation of complement, a multitude of split products are able to facilitate the recruitment of immune cells to sites of inflammation and pathogen clearance via opsonisation or direct destruction. It is now well established that these actions represent only one part of a diverse array of complement functions, with emerging research demonstrating the versatility of this phylogenetically conserved family throughout numerous cell systems and developmental stages.

Traditionally, complement activation has been thought to occur through three pathways; the C1 antibody-antigen complex of the classical pathway, spontaneous C3 hydrolysis of the alternative pathway, or recognition of damaged or pathogenic surfaces by mannose-binding lectin (MBL) through the . Pathway activation initiates a cascade resulting in the cleavage of complement factor 3 (C3) and complement factor 5 (C5) to their active fragments (C3a, C3b, C5a, C5b). These cleavage fragments represent the foundation of the complement-initiated cellular immune response (for a comprehensive review, see (Merle et al. 2015a; Merle et al. 2015b)). Both C3a and C5a are capable of signalling through their respective G-protein coupled receptors, C3aR1 and C5aR1, to regulate the activation of immune cells and their recruitment to sites of tissue injury and inflammation. C5a can also interact with a second C5a receptor, C5aR2, which despite lacking G-protein coupling, can alter the response of a cell to C5a (Croker et al. 2016). Additionally, C3b acts as a powerful , tagging foreign pathogens and cells for destruction, whilst C5b can combine with further downstream complement factors, C6, C7, & C9, to form the membrane attack complex (MAC) capable of disrupting bacterial cell membranes. In the absence of complement cascade activation, C3 and C5 can also be cleaved by a variety of predominantly cell and blood- derived serine proteases (Huber-Lang et al. 2006; Amara et al. 2010; Perl et al. 2012). This ‘extrinsic’ pathway provides a mechanism by which complement can be locally activated in the absence of inflammation, to control a number of immune and non-immune cell processes.

It is now evident that the activation of the innate immune response represents only one arm of the diverse array of physiological functions that receive contribution from the complement proteins. Throughout development, complement activity has been demonstrated from early sperm-egg interactions in fertilisation, to regulation of epiboly and organogenesis, and later in refinement of cerebral synapses. Complement has also been shown to regulate homeostasis of adult tissues, controlling cell processes such as migration, survival, repair, and regeneration. Given the continuing emergence of novel actions of complement, the existing research likely represents only a fraction of the full role of this complex family of proteins. This review is focussed on outlining the current

4 knowledge on both divergent and conserved actions of complement family members in the regulation of cell processes in non-immune systems.

Figure 1.2.1 The complement cascade. Complement activation can occur through three pathways; the C1 antibody-antigen complex of the classical pathway, spontaneous C3 hydrolysis of the alternative pathway, or recognition of damaged or pathogenic surfaces by mannose-binding lectin (MBL). Activation results in a cleavage cascade, and the formation of complement fragments C3a, C3b, C5a, and C5b. These fragments represent the main effector components of the complement system. C3 and C5 may also be cleaved directly via the extrinsic pathway.

5 Complement in basic cell processes

Migration

The coordinated migration of cells is a core process in multicellular organisms, facilitating actions such as embryogenesis, wound healing, and the immune response. The complement system has been demonstrated to have a broad role in the control of cell migration, extending to, and beyond, immunity. Through selective expression and activation, complement factors control a number of migratory processes in the organisation of the developing embryo and in recruitment of adult stem cell pools. The ability of complement to control cell migration also represents a significant arm of the complement-mediated immune response. Activation of the complement cascade results in the cleavage of complement factor 5 (C5) to the active fragment, C5a; a potent mobiliser of immune cell migration capable of recruiting monocytes and to sites of inflammation (Marder et al. 1985; Boneschansker et al. 2014). The action of C5a in recruiting leukocytes is pivotal in the mounting of host defences against pathogens, however, aberrant activity can also play a role in disease pathology. Complement control of cell migration can also have anti-inflammatory actions, moderating the extent of the immune response. This is demonstrated in a model of intestinal ischemia- reperfusion injury, where C3a/C3aR signalling attenuates mobilisation into the circulation, leading to reduced neutrophil recruitment and tissue damage (Wu et al. 2013). Interestingly, this same impaired mobilisation response leads to increased tumour growth in cancer models (Nabizadeh et al. 2016).

In the non-immune context, both C3a and C5a have both been demonstrated to induce actin polymerisation and of mesenchymal stem cells (MSCs) through C3aR1- and C5aR1- dependent phosphorylation of ERK (Schraufstatter et al. 2009). The mobilisation of MSC pools to sites of tissue injury is an important step in repair and regeneration, as such is it proposed that increased C3a and C5a concentrations during inflammation can serve a dual function in both facilitating acute immune responses, as well as mobilising cell pools such as MSCs for subsequent tissue repair. A similar function has also been observed in cardiac progenitor cells (CPCs). Here C3a and C5a, through activation of ERK, PKC, and NFkB pathways, induced transition of CPCs from an endothelial to a mesenchymal state, promoting migration of the cells to sites of repair (Lara-Astiaso et al. 2012). In addition, anaphylatoxin signalling increased proliferation of the CPC pool and induced their maturation towards myofibroblasts, required for repair following cardiac injury.

This action on progenitor cells is not a global phenomenon. Both C3a and C5a also contribute to the mobilisation of bone marrow hematopoietic stem cells (HPSCs). However, in HPSCs C5a and C3a demonstrate opposing actions via separate mechanisms. Through indirect activation of granulocytes,

6 C5a, produced via thrombin cleavage of C5, promotes the release of pro-mobilisation factors that facilitate egress of HPSCs from their bone marrow (BM) niche (Lee et al. 2009). C3a opposes this action, promoting retention of BM HPSCs. C3 and C3aR1 deficient mice show decreased mobilisation of HPSCs in response to G-CSF (Ratajczak et al. 2004). Interestingly, this is not a direct effect, instead C3aR1 signalling sensitises HPSCs to BM stromal cell released SDF-1 (Ratajczak et al. 2004; Wysoczynski et al. 2009). This effect has also been reported in HPSC derivatives including myeloid, erythroid, and megakaryocytic progenitors (Reca et al. 2003). However, other reports have suggested that C3aR1 is not expressed on human HPSCs, with the action of C3a occurring independently of C3aR1 (Honczarenko et al. 2005). Interestingly, this mechanism extends to neural progenitor cells (NPCs) in the adult brain. C3a alone had no observed effect on mouse whole brain- derived NPCs, however it was shown that the presence of C3a increased SDF-1 induced ERK phosphorylation, resulting in chemotaxis and proliferation of NPCs (Shinjyo et al. 2009). The underpinning function of this response was again suggested to lie in complement mobilisation of regenerative/repair responses following injury such as ischemic stroke.

The ability of complement factors to regulate cell migration across a number of systems may also have pathogenic consequences, with aberrant complement expression linked to the migratory properties of a number of cancer cells. Increased C5aR1 levels have been reported in squamous cell carcinomas, adenocarcinomas, and transitional cell carcinoma across a number of tissues. C5aR1 expression was associated with increased cell migration and invasiveness in bile, colon, and renal cancers (Nitta et al. 2013; Maeda et al. 2015). In addition, both C3a and C5a are capable of driving chemotaxis and adhesion of leukemic cells, primarily through p38 MAPK dependent downregulation of heme oxygenase 1 (Abdelbaset-Ismail et al. 2016). As well as being directly chemotactic, C5aR1 has also been shown to promote epithelial to mesenchymal transition in hepatocellular carcinoma, increasing cell motility and invasiveness (Hu et al. 2016).

Adhesion

Adhesion is a well-known facet of complement action in the immune context. Multiple arms of complement are involved in the adhesion and extravasation of leukocytes from the circulation to damaged tissues. However, given the scope of this review, we restrict our focus to the non-immune context.

CD46 is a membrane protein that acts traditionally as an inhibitor of complement activation, through the inactivating cleavage of C3b and C4b. However, at the point of conception, expression of CD46 is restricted to the inner acrosomal membrane (IAM) of sperm (Riley et al. 2002a). This unique

7 localisation has been postulated to facilitate the adherence of spermatozoa to the , permitting penetration and fertilization (Riley-Vargas et al. ; Anderson et al. 1993; Taylor et al. 1994). Interestingly, studies in new world monkeys have suggested that the mechanism of action for CD46 is not through traditional C3b binding, but through an alternative binding domain CCP1 which is selectively expressed in the testes of these animals (Riley et al. 2002b). In support of this, CCP1 blocking antibodies reduced human spermatozoa-egg binding, whereas an antibody against the C3b binding site of CD46 had no effect (Taylor et al. 1994).

C1q, an initiator of the classical complement cascade, has also been linked with adhesive processes outside of immunity. Following fertilisation, the developing embryo must implant into the maternal endometrium. Invasive cytotrophoblasts (CTBs) migrate into the maternal decidua to establish maternofoetal connections required for nutrient exchange and foetal growth. C1q has been demonstrated to facilitate this process, with C1q released by invading CTBs mediating gC1qR and B1 dependent CTB adhesion and decidual migration (Agostinis et al. 2010). Loss of this process in C1q-deficient mice results in embryonic growth restriction with increased foetal resorptions and increased foetal weight after 15 days of pregnancy.

Morphogenesis

Complement C3 has been consistently identified as an important signalling factor in the control of embryonic tissue organisation (Carmona-Fontaine et al. 2011; Broders-Bondon et al. 2016; Szabo et al. 2016). Within the mammalian embryo, our laboratory has documented the presence of multiple complement factors during embryogenesis and neurulation (Denny et al. 2013; Hawksworth et al. 2014; Jeanes et al. 2015). The prominence of C3 in these roles is intriguing as C3, along with activation factors MASP and factor B, are the most evolutionarily primitive components of the complement system, conserved and present in the common ancestor of eumetazoa potentially more than 1300 million years ago (Nonaka and Kimura 2006). Whilst this ancient origin is linked to early immune competence, it is possible that the emergence of C3 was as a controller of a sophisticated tissue organisation with immune roles following in later evolution.

The developmental actions of C3 have been best characterised in xenopus and zebrafish studies. In xenopus, C3a/C3aR1 signalling has been implicated in chemotactic processes during gastrulation (Szabo et al. 2016). During epiboly, morphogenetic processes such as radial intercalation are required for the organisation and expansion of the embryo. This radial intercalation has been shown to be driven by C3a/C3aR1 signalling with C3a released from a superficial cell layer a chemoattractant for

8 C3aR1 expressing deep cell layer cells, resulting in the thinning of multilayered deep cells and expansion of tissue during gastrulation (Szabo et al. 2016).

Through a different mechanism, C3 signalling has also been implicated in the control of neural crest cell (NCC) migration. Following the formation of the neural tube, NCCs form in the neural folds and subsequently undergo epithelial to mesenchymal transition. This permits their detachment from the neuroepithelium and migration throughout the embryo, forming structures such as craniofacial cartilage and bone, smooth muscle, and peripheral neurons. Interestingly, this transition to a migratory, mesenchymal state, results in the upregulation of C3aR1. In xenopus and zebrafish models, NCC release of C3a was shown to mediate coattraction between NCCs, allowing for collective, coordinated migration (Carmona-Fontaine et al. 2011). Mouse studies have shown conservation of this function in mammals, with C3a/C3aR1 involvement in collective migration of enteric NCCs (Broders-Bondon et al. 2016). Through N-Cadherin dependent mechanisms, C3a activation of C3aR1 facilitated coattraction, with perturbation of C3aR1 signalling disrupting migration of enteric NCCs and gut colonisation. C3a/C3aR1 signalling again plays an important role in the migratory process of post-natal cerebellar NPCs. C3a subdural injections in P10 rats increased granule cell motility and migration, resulting in decreased external granule layer (EGL) thickness and increased internal granule layer (IGL) thickness (Benard et al. 2008). Combined, this evidence supports a novel global role for the C3a/C3aR1 axis in the normal physiology of development.

Interestingly, a further two complement factors, CL-K1 and MASP1 of the lectin pathway have also been implicated in the control of NCC migration (Rooryck et al. 2011). Mutations in these factors have been identified in 3MC patients, a rare disorder resulting in features such as facial dysmorphism, cleft lip and/or palate, craniosynostosis, learning disability and genital, limb and vesicorenal anomalies. Animal studies have shown that both these factors serve as guidance cues for migratory NCCs, with loss of either gene resulting in craniofacial abnormalities as a consequence of defective NCC migration (Rooryck et al. 2011). Of the two proteins, CL-K1 was also directly identified as a NCC chemoattractant. Whilst traditionally associated with complement activation following bacterial infection, the emergence of MASP along with C3 in eumetazoa perhaps points to evolutionary origins of complement in tissue organisation before immunity.

Proliferation

The complement system has been demonstrated to be capable of not only activating immune and inflammatory responses, but also of coordinating the activation of cells following injury, mediating regenerative and repair responses primarily through induction of cell proliferation.

9 An involvement of complement in tissue regeneration was first identified in urodeles, amphibians capable of regenerating limb and lens tissue. Following limb amputation or lens removal, C3 and C5 are both upregulated in distinct regions, with C3 expression predominately in the limb blastemal, iris and cornea, and C5 expression mainly in the limb wound epithelium and lens vesicle (Del Rio-Tsonis et al. 1998; Kimura et al. 2003). These observations strongly suggested an involvement of these complement factors in urodele tissue regeneration, however, no mechanistic function was demonstrated. Further studies in chick retina identified the C3 fragment, C3a, as a potent inducer of regeneration (Haynes et al. 2013). Following retina removal, exogenous C3a, through C3aR1 activation, stimulated retinal progenitor proliferation and retinal regeneration. This effect was observed to be through activation of a critical regenerative pathway, with C3a/C3aR1 signalling increasing STAT3 phosphorylation and induction of IL-6, IL-8, and TNFα expression.

The complement anaphylatoxins have also been identified as promotors of liver regeneration. Following either partial hepatectomy or CCl4 injury, normally quiescent hepatocytes will be induced to proliferate and regenerate the damaged/loss liver mass. Deficiency in either C3, C5, or both factors has been observed to result in impairment of this regenerative response (Mastellos et al. 2001; Strey et al. 2003). Similar to chick retina, loss of complement signalling resulted in impaired activation of known pro-regenerative pathways including TNFα and IL-6 mRNA expression, and NF-kB and STAT3 signalling (Strey et al. 2003). Furthermore, in rat studies, C5a/C5aR1 signalling was associated with upregulation of mitogenic factors HGF and c-met receptor, and increased hepatocyte proliferation (Daveau et al. 2004). Interestingly, C4 deficient mice (inducing loss of classical and lectin pathways) and Factor B deficient mice (inducing loss of the alternative pathway) had no impairment in regeneration, suggesting that cleavage and activation of C3 and C5 occurs via the extrinsic pathway (Clark et al. 2008).

The involvement of complement in proliferation and regeneration has also been observed in neural tissue. Developmentally, C5aR1 was shown to stimulate proliferation of immature cerebellar granule neurons, whilst C3aR1 antagonism was linked with reduced proliferation of neuronal progenitor cells (Benard et al. 2008). In the adult brain, the action of C3 signalling was extended to the regenerative response following injury, with mice deficient in C3 having impaired neurogenesis following ischemic stroke (Rahpeymai et al. 2006). Additionally, in the post-acute phase of spinal cord injury, C5aR1 signalling reduces pathology and improves recovery of motor functions (Brennan et al. 2015). The underlying mechanism was demonstrated to be through C5aR1 control of astrocyte proliferation and glial scar formation, processes necessary for recovery, via STAT3 signalling. In tissues with poor regenerative capacity, complement signalling following injury has also been associated with induction of tissue repair responses. Both C3a and C5a, acting through their respective receptors

10 C3aR1 and C5aR1, have been reported to stimulate proliferation of cardiac progenitor cells (CPCs) whilst pushing these cells towards a myofibroblast state, promoting tissue repair and fibrosis (Lara- Astiaso et al. 2012).

Figure 1.2.2. Complement control of migration, adhesion, and morphogenesis. Summary of complement factors and cell types involved for the aforementioned cell processes in non-immune systems. Effect is summarised by positive (+) and negative (−) modulation of the cell process. HPSC = hematopoietic stem cell, NCC = neural crest cell.

In the context of response to injury, complement factor C1q has been shown to regulate a number of cell processes in endothelial, CNS, and skeletal muscle cells. Within each cell type, a different mechanism of action for C1q was identified, highlighting the diverse capabilities of this complement factor. In the endothelium of blood vessels, C1q is present exclusively during wound healing (Bossi et al. 2014). Likely acting through its receptor gC1qR, C1q was observed to have angiogenic activity,

11 stimulating endothelial proliferation and new vessel formation. In a human microvascular endothelial cell line (HMEC-1) similar proliferative and angiogenic effects were seen for C5a/C5aR1 signalling (Kurihara et al. 2010). C1q has also been shown to act independently of its traditional receptors, interacting with a number of soluble proteins to regulate biological processes. This is exemplified in neuronal regeneration

Figure 1.2.3 Complement control of proliferation, survival, and synaptic pruning. Summary of complement factors and cell types involved for the aforementioned cell processes in non-immune systems. Effect is summarised by positive (+) and negative (−) modulation of the cell process.

12 following spinal cord injury (SCI), where C1q has been observed to bind and negatively regulate myelin associated glycoprotein (MAG) (Peterson et al. 2015). Through inhibition of MAG inhibitory signals, C1q is capable of enhancing cortical neuron outgrowth, promoting recovery following SCI. Such unique interactions by C1q can also have deleterious effects on tissue regeneration. C1q has been observed to be capable of binding receptors to activate Wnt signalling (Naito et al. 2012). In skeletal muscle tissue this interaction results in differential modulation of cell proliferation, with anti-proliferative effects of C1q on satellite cells, whilst increasing proliferation of fibroblasts. Overall this lead to impaired regeneration of damaged muscle tissue and increased fibrosis. C1q was also observed to have antiproliferative effects on malignant cell lines of lymphoid origin (Ghebrehiwet et al. 1990).

The capacity of complement to drive proliferation also extends to more unexpected members of the complement family including the terminal complement complex C5b-9 and the complement regulator CD46. The C5b-9 complex is commonly known for its function as the membrane attack complex, directly destroying foreign pathogens. However, a number of studies have suggested a pro- proliferative effect of C5b-9 on host cells during inflammation. C5b-9 has been reported to signal through G-protein dependent mechanisms, activating second messengers such as ERK and PI3K to stimulate proliferation of a number of cell types including oligodendrocytes, aortic endothelial cells, glomerular mesangial cells, and lymphoblastic B cells (Rus et al. 1996; Niculescu et al. 1997; Niculescu et al. 1999; Fosbrink et al. 2006; Qiu et al. 2012). This proliferative stimulus from C5b-9 generated during inflammatory processes is suggested to be pathogenic, driving sclerotic change in tissues.

The complement receptor CD46, traditionally a negative complement regulator, is now at the forefront of emerging complement studies, with a number of roles for this receptor identified including actions in driving cell proliferation. Acting as a costimulatory molecule, CD46 with CD3 (T-cell co-receptor) strongly promotes T cell proliferation (Astier et al. 2000; Arbore et al. 2016). CD46 expression is also required for epidermal stem cell proliferation (Tan et al. 2013). Whilst the mechanism by which CD46 drives epidermal stem cell proliferation was not outlined, it is noteworthy that the role of CD46 was identified through its association with high expression of the notch ligand, delta-like 1 (DLL1). In T cell biology, CD46 has been identified as a binder of another notch ligand, Jagged1 (Le Friec et al. 2012). This interaction was proposed as a mechanism by which Notch1- Jagged1 interaction is limited by CD46, favouring Notch1 and DLL1 signalling. It is possible that CD46 is influencing notch signalling, promoting Notch1-DLL1 interaction and cell proliferation. Considering the significant involvement of notch signalling in development and the ubiquitous

13 expression of CD46, it will be interesting to see whether CD46/notch interactions have as of yet an undiscovered involvement in the coordinated regulation of developmental processes.

Survival

During the activation of inflammation in response to tissue damage or pathogens, complement factors are also essential for the survival of host cells. Expression of inhibitory complement receptors such as CD46, CD55, and CD59 protect host cells from innate immune attack, whilst stimulation of complement receptors such as C3aR1 can promote cell survival in the presence of pathogenic infection (Zipfel and Skerka 2009; Mueller-Ortiz et al. 2014). Complement signalling can also directly promote survival of immune cells during inflammation. Under normal conditions, circulating neutrophils undergo spontaneous apoptosis, however, C5a signalling, activated during inflammation, is capable of perturbing these apoptotic signals (Perianayagam et al. 2004). Whilst this may enhance pathogen destruction, it has also been suggested that C5a induced neutrophil survival can accentuate organ injury during inflammation (Guo et al. 2006). In addition to these actions, complement signalling is utilised independently of immunity to control cell survival during neuronal development and in adult tissues including the CNS, PNS, and hepatic system.

As a potent driver of inflammation, the complement system can have a significant impact on cell survival. Within the brain, complement activation of inflammation and immunity has implications in the progression of neurodegenerative conditions such as Alzheimer’s disease, multiple sclerosis, and motor neuron disease (Woodruff et al. 2006; Woodruff et al. 2008; Ingram et al. 2009), as well as in acute injury models such as spinal cord injury and stroke (Brennan et al. 2012). Whilst the pathogenic actions of complement in progression of these diseases resides in the mobilisation of immunity (Brennan et al. 2016), studies have also identified the ability of complement factors to positively modulate cell survival pathways in neurons and glia. This dual function of complement may exist to permit inflammation whilst promoting the survival of host cells.

In the central nervous system, C5a signalling has been shown to be both neuroprotective and neurodestructive. During glutamate excitotoxicity, activation of neuronally expressed C5aR1 promotes survival, inhibiting apoptotic protein activation such as caspase 3, whilst maintaining expression of GluR2 receptors (Mukherjee et al. 2008). In development, C5a/C5aR1 signalling has again been implicated as a promotor of neuronal survival. For example, in developing rat cerebellar granule neurons, C5aR1 expression was increased, with C5a/C5aR1 signalling reducing in vitro apoptosis (Bénard et al. 2004). In contrast to neuroprotection in the setting of glutamate toxicity, in the setting of hypoxic ischemia, C5a/C5aR1 signalling directly induces apoptosis of cortical neurons

14 (Pavlovski et al. 2012). Additionally, C3a signalling has been reported to promote neuronal survival during glutamate excitotoxicity, however, this effect is indirect, with C3a stimulated astrocytes providing anti-apoptotic signals for neurons (van Beek et al. 2001). As well as promoting neuron survival, C3a stimulation of astrocytes has also been shown to directly promote astrocyte survival under conditions of ischemic stress (Shinjyo et al. 2016).

Complement anaphylatoxins have also been implicated as pro-survival factors in hepatocytes. C3 deficiency, with consequent lack of C3a and C5a production, was associated with dysregulation of STAT3, AKT, and mTOR signalling, resulting in impaired hepatocyte survival following partial hepatectomy (Markiewski et al. 2009). This was a direct effect of C3a and C5a signalling, with supplementation of mice with C3a and C5a able to ameliorate the impaired survival.

In experimental autoimmune encephalomyelitis, an animal model of multiple sclerosis, complement C5 has been shown to promote cell survival resulting in increased remyelination during recovery (Niculescu et al. 2004). Rather than through C5a signalling, as was seen in CNS and liver cells, the action of C5 has been suggested to be through the C5b cleavage fragment in the formation of the C5b- 9 complex (Niculescu et al. 2004). In oligodendrocytes, sublytic C5b-9 was observed to signal through ERK and AKT to inhibit both Fas/FasL and mitochondrial apoptotic pathways (Soane et al. 2001; Cudrici et al. 2006). Anti-apoptotic signalling by C5b-9 has also been reported in Schwann cells, with C5b-9 signalling through AKT resulting in negative phosphorylation of BAD and increased Bcl-xL expression (Hila et al. 2001). C5b-9 has also been observed to promote survival of smooth muscle cells, stimulating IGF-1 secretion and IGF-1 receptor expression to inhibit Fas/FasL mediated apoptosis (Zwaka et al. 2003).

Synaptic pruning

One of the hallmark features of the complement response is the ability of complement to control phagocytosis of pathogens and apoptotic cells. Traditionally, this is undertaken through the binding of C3b to cell membranes, tagging appropriate cells and fragments for leukocyte phagocytosis, with protection of host cells through the expression of negative complement regulators such as CD46, CD55 and . Through similar mechanisms, complement has been identified as an important controller of cell survival during brain formation, with complement-mediated phagocytosis resulting in synapse refinement necessary for correct neural development. Furthermore, aberrant activity of the involved complement proteins has been implicated in the pathogenesis of disorders such as schizophrenia and Alzheimer’s disease.

15 In an animal model of synaptic pruning during development, C1q and C3 were both identified as factors required for the elimination of synapses (Stevens et al. 2007). Whilst not demonstrated in this study, the mechanism behind this was suggested to be through the capability of these proteins to tag cells for destruction, in this case potentially tagging synapses with inappropriate electrical activity for phagocytic elimination by microglia. In support of this it was shown that complement receptor 3 (CR3)/C3 signalling drives microglial phagocytosis of synapses during retinogeniculate pruning (Schafer et al. 2012).

Further studies showed that an absence of C1q resulted in increased cortical excitatory synapses (Chu et al. 2010). As a consequence of this increased activity, C1q knockout mice suffered from atypical absence seizures, highlighting the necessity of complement in synapse refinement and CNS development (Chu et al. 2010). Furthermore, expression of C1q for synaptic pruning has been shown to be driven by TGF-β signalling (Bialas and Stevens 2013). In a similar model, C4 was also identified as a mediator of synapse elimination during postnatal development. In humans, aberrant expression of C4 is associated with patients affected by schizophrenia (Sekar et al. 2016). The resultant increase in C4 activity may play a role in the decreased synapse number and loss of grey matter seen in schizophrenia.

In the post-natal brain, C1q has been observed to have mixed effects on neuronal survival, both promoting death via complement activation of inflammation, and directly activating neurons to promote survival. In acute models such as ischemic stroke, C1q knockout mice have reduced complement activation and inflammation resulting in protection from brain injury (Ten et al. 2005). Interestingly, this effect of C1q was observed to only occur in neonates, not adult mice. In contrast, a neurodegenerative model of Alzheimer’s disease identified C1q as a protective factor, with neuronal upregulation of C1q expression during injury conferring cell survival against amyloid beta (Aβ) toxicity (Pisalyaput and Tenner 2008). The mechanism of C1q promoted survival was reported to be both through the ability of C1q to bind and aggregate Aβ fragments, and through C1q induction of neuronal expression of the protective receptors LRP1B and GPR6 (Benoit et al. 2013). Interestingly, CNS expression of C1q has been reported to increase significantly during aging, accumulating near aging synapses (Stephan et al. 2013). C1q deficiency was associated with reduced cognitive decline suggesting that whilst activating neuroprotective pathways, the multiple actions of C1q may overall have a detrimental effect on the aging brain, promoting neurodegeneration. In support of this, recent studies have demonstrated that the aforementioned C1q, C3, and CR3 complement-dependent synaptic pruning pathways physiologically required during development, are inappropriately activated in early Alzheimer’s disease, mediating synaptic loss before the appearance of amyloid plaques (Hong et al. 2016). Additionally, inhibition of the classical pathway of the complement

16 cascade is associated with reduced synaptic degeneration in animal models of glaucoma (Williams et al. 2016), whilst C3-knockout mice show altered synaptic function and enhanced learning, as well as protection against age-related hippocampal decline (Perez-Alcazar et al. 2014; Shi et al. 2015).

Summary

In this review we have summarised the current knowledge regarding the role complement proteins play in basic cell processes of non-immune cells. Such novel roles include the control of tissue organisation in development, and synaptic refinement in the mammalian brain (refer to Figs. 1.2.2 and 1.2.3 for synopsis). The link of these functions with the pathogenesis of disorders of development such as 3MC syndrome, neural tube defects, and schizophrenia, and with neurodegenerative disorders such as Alzheimer’s disease, highlights the importance of complement in regulating cell activity and the future potential of complement-targeted therapeutics in the regulation of these disease processes (Brennan et al. 2016). Additionally, the demonstration of complement interactions with other signalling pathways, such as C1q and CD46 in their regulation of wnt and notch signalling respectively (Le Friec et al. 2012; Naito et al. 2012), personifies the continuing emergence of unexpected roles of complement, and the far-reaching potential for complement in vital physiological and developmental processes.

Once regarded solely as an activator of innate immunity, it is now clear that the complement system acts in an assortment of cells and tissues, performing a myriad of functions that current research has only partially defined. With such an array of roles, it is interesting to speculate the original purpose of such a system. Whilst studies have established C3, MASP, and factor B as the most evolutionarily ancient components of complement, it remains to be seen whether these proteins initially emerged as components of early immunity or as controllers of tissue morphogenesis, with immune actions developing later. Regardless, it is evident that complement system can no longer be simply defined as an immune cascade, but rather a multi-faceted signalling family that underpins a broad range of fundamental cell processes in both development and adult tissues.

17 References

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27 1.3 C5aR1

C5aR1 lies at the heart of the canonical complement mediated response, with novel functions of C5aR1 signalling also reported in non-immune cells in areas such as regeneration to neuronal survival (Hawksworth et al. 2016). This thesis is focussed on this pivotal complement receptor, and the exploration of novel roles of C5a/C5aR1 signalling.

Signalling

C5aR1 is a classical G-protein coupled seven-transmembrane domain receptor. The endogenous ligand for C5aR1, C5a, interacts with C5aR1 via a two-site model, with biding of both the C5aR1 N- terminus and transmembrane domains required for receptor activation (Monk et al. 2007).

Following ligand binding and receptor activation, C5aR1 has been demonstrated to couple to Gi/o or Gq proteins to elicit cell-specific second messenger signalling cascades. This includes mitogen- activated protein kinase (MAPK), phosphatidylinositol 3 kinase (PI3K), protein kinase C (PKC) and nuclear factor kappa-light-chain-enhancer of activated B cells (NFkB) signalling pathways (Monsinjon et al. 2003; Sayah et al. 2003; Monk et al. 2007).

Ligands

A number of ligands for C5aR1 have been reported, with the main endogenous ligand, C5a, demonstrated to activate C5aR1 with nanomolar potency (Fig 1.3.1). A number of other endogenous ligands have been reported to have affinity for C5aR1. This includes the C5a metabolite, C5a desArg which can activate C5aR1, albeit at a 10-100 fold reduced potency (Monk et al. 2007). In addition, the ribosomal protein S19 and bacterial chaperone Skp have both been reported to bind to C5aR1 (Nishiura et al. 1996; Shrestha et al. 2004).

A number of synthetic C5aR1 have been reported in the literature, which may offer advantages in terms of stability and cost. However, to date, these agonists lack specificity for C5a receptors. For example, the best reported peptide, YSFKPMPLaR (EP54), functionally binds both C5aR1 and C3aR1 (Finch et al. 1997; Scully et al. 2010). Whilst presenting a significant cost advantage, the lack of specificity of synthetic ligands such as EP54 restricted their selection for use in this thesis, with commercially available C5a isolated from human donors preferred for interrogation of C5aR1 function.

28 Greater success has been seen in the development of selective antagonists of C5aR1. A number of C5aR1 antagonists are now available for research across a number of classes including antibody inhibitors, peptides, and non-peptidic small molecules (Hawksworth et al. 2017). The available C5aR1 antagonists, and their use in clinical research, is reviewed in further detail in section 1.4 of this thesis. Of the available inhibitors, the peptide antagonist, PMX53 (3D53), was selected for use in this thesis. A specific non-competitive inhibitor of C5aR1, PMX53 remains the most widely utilised C5aR1 antagonist in preclinical research and is ideal for the in vitro experiments performed in this thesis.

A B

100 100

50 50

0 0 Normalised ResponseNormalised

-8 -6 -8 -6 -4 -14 -12 -10 -10 log [C5a] log [PMX53]

Figure 1.3.1 Dose response curves for human C5a and PMX53. Data was obtained using calcium flux analysis of matured U937 cells. A) Response to varied concentrations of C5a. B) Response of U937 cells to 1 nM C5a following pre-treatment with varied concentrations of the C5aR1 , PMX53. Unpublished Data, Owen Hawksworth.

Function

Whilst C5aR1 is now accepted to have diverse functions across a number of systems, the classical understanding of C5aR1 function is derived from its role in the innate immune response. C5aR1 is expressed on all leukocytes of the myeloid lineage, co-ordinating their response to tissue injury and pathogens (Marder et al. 1985; Merle et al. 2015). Broadly, C5aR1 receptor signalling in both immune

29 and non-immune cells has been shown regulate a number of cellular functions including migration, survival, and effector response (Hawksworth et al. 2016). In neutrophils, C5aR1 signalling has a bimodal effect, dependent on C5a concentration (Ehrengruber et al. 1994; Boneschansker et al. 2014). At lower concentrations C5aR1 receptor activation promotes neutrophil chemotaxis, whilst higher concentrations promote degranulation of neutrophils. Additionally, under normal conditions, circulating neutrophils undergo spontaneous apoptosis, an effect which is perturbed by C5aR1 signalling to enhance the immunological efficacy of neutrophils (Perianayagam et al. 2004). C5aR1 signalling also promotes degranulation of other myeloid cells, including mast cells and basophils, and chemotaxis of macrophage cells (Fureder et al. 1995; Haviland et al. 1995; Huber-Lang et al. 2003; Heimbach et al. 2011).

Of particular interest to this thesis are the non-immune actions of C5aR1 in the central nervous system (CNS), where a number of functions have been reported. This includes C5aR1 signalling driving proliferation of immature cerebellar granule neurons (Benard et al. 2004) and astrocytes (Brennan et al. 2015), and reports of both pro- and anti- apoptotic effects in cortical neurons under physiological conditions (Benard et al. 2004; Mukherjee et al. 2008; Pavlovski et al. 2012; Hernandez et al. 2017). The functions of C5aR1 signalling in non-immune cells are discussed further in section 1.2 of this thesis.

30 References

Benard, M., B. J. Gonzalez, M. T. Schouft, A. Falluel-Morel, D. Vaudry, P. Chan, H. Vaudry, and M. Fontaine. 2004. 'Characterization of C3a and C5a receptors in rat cerebellar granule neurons during maturation. Neuroprotective effect of C5a against apoptotic cell death', J Biol Chem, 279. Boneschansker, Leo, Jun Yan, Elisabeth Wong, David M. Briscoe, and Daniel Irimia. 2014. 'Microfluidic platform for the quantitative analysis of leukocyte migration signatures', Nat Commun, 5. Brennan, F. H., R. Gordon, H. W. Lao, P. J. Biggins, S. M. Taylor, R. J. Franklin, T. M. Woodruff, and M. J. Ruitenberg. 2015. 'The Complement Receptor C5aR Controls Acute Inflammation and Astrogliosis following Spinal Cord Injury', J Neurosci, 35: 6517-31. Ehrengruber, M. U., T. Geiser, and D. A. Deranleau. 1994. 'Activation of human neutrophils by C3a and C5A. Comparison of the effects on shape changes, chemotaxis, secretion, and respiratory burst', FEBS Lett, 346: 181-4. Finch, A. M., S. M. Vogen, S. A. Sherman, L. Kirnarsky, S. M. Taylor, and S. D. Sanderson. 1997. 'Biologically active conformer of the effector region of human C5a and modulatory effects of N-terminal receptor binding determinants on activity', J Med Chem, 40: 877-84. Fureder, W., H. Agis, M. Willheim, H. C. Bankl, U. Maier, K. Kishi, M. R. Muller, K. Czerwenka, T. Radaszkiewicz, J. H. Butterfield, G. W. Klappacher, W. R. Sperr, M. Oppermann, K. Lechner, and P. Valent. 1995. 'Differential expression of complement receptors on human basophils and mast cells. Evidence for heterogeneity and CD88/C5aR expression on skin mast cells', J Immunol, 155: 3152-60. Haviland, D. L., R. L. McCoy, W. T. Whitehead, H. Akama, E. P. Molmenti, A. Brown, J. C. Haviland, W. C. Parks, D. H. Perlmutter, and R. A. Wetsel. 1995. 'Cellular expression of the C5a anaphylatoxin receptor (C5aR): demonstration of C5aR on nonmyeloid cells of the liver and lung', J Immunol, 154: 1861-9. Hawksworth, Owen A., Liam G. Coulthard, and Trent M. Woodruff. 2016. 'Complement in the fundamental processes of the cell', Mol Immunol. Hawksworth, Owen A., Xaria X. Li, Liam G. Coulthard, Ernst J. Wolvetang, and Trent M. Woodruff. 2017. 'New concepts on the therapeutic control of complement anaphylatoxin receptors', Mol Immunol. Heimbach, L., Z. Li, P. Berkowitz, M. Zhao, N. Li, D. S. Rubenstein, L. A. Diaz, and Z. Liu. 2011. 'The C5a receptor on mast cells is critical for the autoimmune skin-blistering disease bullous pemphigoid', J Biol Chem, 286: 15003-9.

31 Hernandez, M. X., P. Namiranian, E. Nguyen, M. I. Fonseca, and A. J. Tenner. 2017. 'C5a Increases the Injury to Primary Neurons Elicited by Fibrillar Amyloid Beta', ASN Neuro, 9: 1759091416687871. Huber-Lang, M. S., J. V. Sarma, S. R. McGuire, K. T. Lu, V. A. Padgaonkar, E. M. Younkin, R. F. Guo, C. H. Weber, E. R. Zuiderweg, F. S. Zetoune, and P. A. Ward. 2003. 'Structure-function relationships of human C5a and C5aR', J Immunol, 170: 6115-24. Marder, S. R., D. E. Chenoweth, I. M. Goldstein, and H. D. Perez. 1985. 'Chemotactic responses of human peripheral blood monocytes to the complement-derived peptides C5a and C5a des Arg', J Immunol, 134: 3325-31. Merle, Nicolas S., Remi Noe, Lise Halbwachs-Mecarelli1, Veronique Fremeaux-Bacchi, and Lubka T. Roumenina. 2015. 'Complement system part II: role in immunity', Frontiers in Immunology, 6. Monk, P. N., A. M. Scola, P. Madala, and D. P. Fairlie. 2007. 'Function, structure and therapeutic potential of complement C5a receptors', British Journal of Pharmacology, 152: 429-48. Monsinjon, T., P. Gasque, P. Chan, A. Ischenko, J. J. Brady, and M. C. Fontaine. 2003. 'Regulation by complement C3a and C5a anaphylatoxins of cytokine production in human umbilical vein endothelial cells', FASEB J, 17. Mukherjee, Piali, Sunil Thomas, and Giulio Maria Pasinetti. 2008. 'Complement anaphylatoxin C5a neuroprotects through regulation of glutamate receptor subunit 2 in vitro and in vivo', Journal of Neuroinflammation, 5: 1-7. Nishiura, H., Y. Shibuya, S. Matsubara, S. Tanase, T. Kambara, and T. Yamamoto. 1996. 'Monocyte chemotactic factor in rheumatoid arthritis synovial tissue. Probably a cross-linked derivative of S19 ribosomal protein', J Biol Chem, 271: 878-82. Pavlovski, Dale, John Thundyil, Peter N. Monk, Rick A. Wetsel, Stephen M. Taylor, and Trent M. Woodruff. 2012. 'Generation of complement component C5a by ischemic neurons promotes neuronal apoptosis', The FASEB Journal, 26: 3680-90. Perianayagam, M. C., V. S. Balakrishnan, B. J. Pereira, and B. L. Jaber. 2004. 'C5a delays apoptosis of human neutrophils via an extracellular signal-regulated kinase and Bad-mediated signalling pathway', Eur J Clin Invest, 34: 50-6. Sayah, S., A.C. Jauneau, C. Patte, M.C. Tonon, H. Vaudry, and M. Fontaine. 2003. 'Two different transduction pathways are activated by C3a and C5a anaphylatoxins on astrocytes', Mol. Brain. Res., 112: 53-60. Scully, C. C., J. S. Blakeney, R. Singh, H. N. Hoang, G. Abbenante, R. C. Reid, and D. P. Fairlie. 2010. 'Selective hexapeptide agonists and antagonists for human complement C3a receptor', J Med Chem, 53: 4938-48.

32 Shrestha, A., L. Shi, S. Tanase, M. Tsukamoto, N. Nishino, K. Tokita, and T. Yamamoto. 2004. 'Bacterial chaperone protein, Skp, induces leukocyte chemotaxis via C5a receptor', Am J Pathol, 164: 763-72.

33 1.4 Pharmacological Modulators of Anaphylatoxin Signaling

New concepts on the therapeutic control of complement anaphylatoxin receptors

Owen A. Hawksworth1,2, Xaria X. Li1, Ernst J. Wolvetang2, Trent M. Woodruff1

Affiliations: 1School of Biomedical Sciences, The University of Queensland, St. Lucia, Australia 2Australian Institute of Bioengineering and Nanotechnology, University of Queensland, St. Lucia, Australia

Published in Molecular Immunology

34 Abstract

The complement system is a pivotal driver of innate immunity, co-ordinating the host response to protect against pathogens. At the heart of the complement response lie the active fragments, C3a and C5a, acting through their specific receptors, C3aR, C5aR1, and C5aR2, to direct immune cells. Their potent function however, places them at risk of damaging the host, with aberrant C3a and C5a signalling activity linked to a wide range of disorders of inflammatory, autoimmune, and neurodegenerative aetiologies. As such, the therapeutic control of these receptors represents an attractive drug target, however, the realisation of this clinical potential remains limited. With the success of eculizumab, and the progression of a number novel C5a-C5aR1 targeted drugs to phase II and III clinical trials, there is great promise for complement therapeutics in future clinical practice. In contrast, the toolbox of drugs available to modulate C3aR and C5aR2 signalling remains limited, however, the emergence of new selective ligands and molecular tools, and an increased understanding of the function of these receptors in disease, has highlighted their unique potential for clinical applications. This review provides an update on the growing arsenal of drugs now available to target C5, and C5a and C3a receptor signalling, and their utility in both clinical and pre-clinical development.

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35 Introduction

From its first description at the end of the 19th century as a single heat-labile effector of antibody- mediated immunity, knowledge of complement has expanded to reveal a complex and vital family of proteins, capable of controlling the innate immune response through activation and recruitment of immune cells, tagging of pathogens for destruction, and the direct lysis of bacterial pathogens (Kaufmann 2008; Nesargikar, Spiller, and Chavez 2012). The complement system achieves its function through a number of activating pathways with different triggering mechanisms. This includes the traditional C1 antibody-antigen complex of the classical pathway, spontaneous C3 hydrolysis of the alternative pathway, or recognition of damaged or pathogenic surfaces through the lectin pathway; as well as more recently acknowledged extrinsic and intracellular activating mechanisms (Hawksworth, Coulthard, and Woodruff 2016). These pathways converge to cleave the central complement factors C3 and C5 to their respective active fragments, C3a and C3b, and C5a and C5b. These fragments represent the core effector components of the complement response. C3b covalently binds target cells to instruct phagocytosis and also initiate C5 cleavage, whilst C5b is capable of directing the formation of the membrane attack complex (MAC) to directly lyse target cells. The fragments C3a and C5a, traditionally described as anaphylatoxins, but perhaps more usefully termed inflammatory modulators (Coulthard and Woodruff 2015), exert their effects through activation of specific receptors, C3aR, C5aR1, and C5aR2. Capable of activating and recruiting immune cells to sites of inflammation, the powerful function of these receptors as drivers of innate immunity, also implicates them in the progression of a wide and ever expanding number of disorders with underlying inflammatory aetiologies.

A significant body of research has ascribed aberrant anaphylatoxin receptor activity, particularly C5aR1, in driving the pathology of autoimmune, neurodegenerative, and inflammatory conditions (Morgan and Harris 2015; Brennan et al. 2016). As such, it is unsurprising that there has been great interest in the therapeutic targeting of anaphylatoxin receptors (Woodruff, Nandakumar, and Tedesco 2011). Despite promising efforts, decades of clinical trials have shown little success for C5aR1- targeted therapeutics (Morgan and Harris 2015). However, the increased understanding of complement mutations underlying human pathologies, and the clinical success of the C5-targeted therapeutic, eculizumab, has only served to increase interest in the study of anaphylatoxin receptor inhibition. Newer therapeutics targeting the C5a-C5aR1 signalling axis are now entering phase II and III clinical trials, whilst new preclinical drug development and disease modelling has strengthened the viability for modulation of C3aR and C5aR2 as a novel therapeutic approach. This review provides an update on the current landscape of anaphylatoxin targeted therapeutics in both clinical and preclinical development.

36

Figure 1.4.1: The complement cascade and drugs available for targeting terminal complement receptor signalling. A number of therapeutics are available for the inhibition of complement anaphylatoxin receptors. Displayed are those approved for clinical use (silver), in current clinical trials (orange), or available for preclinical research and development (purple).

37 Inhibitors of C5/C5a

Given the potent inflammatory potential of complement activation, therapeutic targeting of complement holds great promise for the future treatment of a number of autoimmune and inflammatory diseases. To date however, the current suite of clinically available specific terminal complement therapeutics remains limited to just one, the C5 inhibitor, eculizumab, the ‘poster child’ of complement therapeutics. First approved for use in 2007, this humanised monoclonal antibody is capable of binding C5, preventing its cleavage and formation of C5a and C5b proteins, and subsequent MAC formation (Rother et al. 2007). Clinically, eculizumab has had great success as the only disease-modifying treatment for paroxysmal nocturnal hemoglobinuria (PNH) and atypical haemolytic uremic syndrome (aHUS), with a dramatic effect seen in improving patient morbidity and mortality. The success of eculizumab in treatment of these diseases has prompted a number of trials aimed at identifying further therapeutic applications (Table 1.4.1). Clinical trials have shown promising results in the treatment of neuromyelitis optica, myasthenia gravis, and CD59 deficiency induced Guillain-Barre syndrome (Pittock et al. 2013; Howard et al. 2013; Mevorach et al. 2016). Eculizumab has not proven a magic bullet for all inflammatory diseases however, with no significant efficacy observed in trials for the treatment of macular degeneration, rheumatoid arthritis, or in improving transplant and coronary bypass outcomes (Verrier et al. 2004; Yehoshua et al. 2014; Garcia Filho et al. 2014; Rother et al. 2007). This may be due to alternative drivers of disease pathology, or unfavourable pharmacological characteristics of antibody-based inhibition of C5. Clinical trials of another monoclonal C5 inhibitor, LFG316, has reported a similar lack of effect in the treatment of macular degeneration (Reis et al. 2015). In contrast, the C5 inhibitor, Zimura, has reported benefits in clinical trials for the treatment of age-related macular degeneration, with phase II/III trials for geographic atrophy and macular degeneration ongoing (ClinicalTrials.gov identifier: NCT02686658) (Querques et al. 2015). An alternative to antibody-based inhibition of C5, Zimura is a chemically synthesised aptamer (oligonucleotide-based ligand) which may offer benefits in terms of production cost, efficacy, and side-effect profiles (Keefe, Pai, and Ellington 2010). Zimura is also in phase II trials for the treatment of the eye disorder, idiopathic polypoidal choroidal vasculopathy (NCT02397954).

In addition to poor efficacy in some trials, limitations have been seen on the practical use of eculizumab, including drug cost, side effects, and a lack of efficacy in patient subpopulations. The high cost for development and manufacture of antibody therapeutics, in combination with reduced competition through orphan drug exclusivity rights, has resulted in a hefty price tag for eculizumab (Shaughnessy 2012; Sharma et al. 2010). The average cost per patient in 2012 was in excess of 400,000 USD per year (Shaughnessy 2012). With the patents covering eculizumab set to begin

38 expiring from 2020, a number of biosimilar antibody inhibitors of C5 are already under trial which may improve upon the high cost of the drug (Derbyshire 2015). However, with the continued high cost for development and manufacture of antibody therapeutics, this price reduction is forecast to be limited to only 20-30% of existing prices (Shaughnessy 2012). It should also be noted that rare C5 polymorphisms have been identified which render patients resistant to eculizumab-C5 binding, and therefore non-responders to treatment (Nishimura et al. 2014). Future monoclonal antibody development or alternative C5 inhibition methods may prove beneficial in this patient group.

Increased infection risk is a major a concern with chronic eculizumab treatment (Hillmen et al. 2013), and remains the most significant side effect reported in treated patients. Whilst opsonisation capacity through C3b is maintained with eculizumab, the suppression of terminal MAC formation increases the risk of infection, particularly with encapsulated bacteria (Wong, Goodship, and Kavanagh 2013). Of the most significant, is the increased rate of life-threatening meningococcal disease (Hillmen et al. 2013; Dmytrijuk et al. 2008). In diseases such as PNH and aHUS where MAC is hypothesised to be a key driver of pathology, the risks of MAC inhibition may be inescapable. However, in the expansion of therapeutic applications for complement inhibitors, more specific targeting of anaphylatoxin signalling may prove advantageous, treating the underlying inflammatory disease process whilst preserving bactericidal MAC functionality. To this end, a number of C5a inhibitors have been developed. Phase II trials for the antibody based C5a inhibitor, IFX-1 have reported promising results in the treatment of early sepsis (NCT02246595), with trials also being undertaken for use of IFX-1 for systemic inflammatory response syndrome (SIRS) prophylaxis (NCT02866825), community acquired pneumonia, and hidradenitis suppurativa (NCT03001622) (Ricklin and Lambris 2016). Another antibody based C5a inhibitor, ALXN1007, is in phase II trials for the treatment of graft-versus-host disease (NCT02245412), and antiphospholipid syndrome (NCT02128269). Aptamer technology has also been used to develop C5a inhibitors, NOX-D19 to NOX-D21 (Vater and Klussmann 2015). An L-RNA aptamer (spiegelmer), the NOX molecules offer increased stability and bioavailability over natural D-oligonucleotide ligands, and are suggested to be beneficial over other methodologies due to their highly selective characteristics, low immunogenicity, and potential for a favourable pharmacokinetic and side effect profile. However, to date, testing of these drugs has not yet been reported in human trials.

39

Table 1.4.1: Clinical trials of Eculizumab

Disease Clinical Trial Number Status Phase Paroxysmal Nocturnal Hemoglobinuria Marketed Significant effect

Atypical Hemolytic-uremic Syndrome Marketed Significant effect

Neuromyelitis Optica II NCT02003144 Improvement in patient outcomes III NCT01892345 Ongoing Refractory Generalized Myasthenia Gravis III NCT01997229 Improved patient quality of life Cardiac transplant rejection IV NCT02013037 Ongoing Shiga-Toxin Producing Escherichia Coli II/III NCT01410916 No results reported Hemolytic-Uremic Syndrome

III NCT02205541 Ongoing Chronic Cold Agglutinin Disease II NCT01303952 Significant effect

Guillain-Barre syndrome II NCT02029378 No results reported CD59 deficiency associated Guillain-Barre I/II NCT01579838 Significant effect syndrome Prevention of Delayed Graft Function II NCT01403389 Ongoing (DGF) in Kidney Transplantation

II NCT01919346 Ongoing Prevention and Treatment of Kidney Graft II NCT01756508 Ongoing Reperfusion Injury

Primary membranoproliferative II NCT02093533 Ongoing glomerulonephropathy

Renal Transplantation in Patients With II NCT01029587 Ongoing History of Catastrophic Antiphospholipid Antibody Syndrome

Dermatomyositis II NCT00005571 No results reported Mild Allergic Asthma II NCT00485576 No results reported Geographic Atrophy in Age-Related II NCT00935883 No effect in disease Macular Degeneration progression

Antibody-mediated Rejection Following II NCT01895127 No effect seen Renal Transplantation

40 Inhibitors of C5aR1

C5a-C5aR1 signalling is a powerful driver of inflammation (Manthey et al. 2009), implicated in the pathogenesis of many inflammatory disorders. As such, targeting of C5a-C5aR1 is an attractive option in the treatment of disease. Direct targeting of C5aR1 has a number of theoretical advantages over inhibition of C5 or C5a. For example, the inhibition of C5aR1 alone would preserve the bactericidal activity of MAC, reducing potential negative immunosuppressive consequences. Additionally, direct C5aR1 inhibition permits continued C5a-C5aR2 signalling. Activation of C5aR2 has been reported to have an anti-inflammatory effect through its negative regulation of C5aR1 signalling (Li et al. 2013). As such, maintenance of this signalling pathway may result in increased efficacy, or reduced dosing requirements, resulting in reduced adverse effects of treatment. Furthermore, direct inhibition of C5aR1 may provide pharmacodynamic advantages over inhibition of soluble C5 or C5a.

To date, there has been a strong interest in the development of C5a-C5aR1 inhibitors, with a diverse number of inhibitors across a number of chemical classes now available. This includes antibody inhibitors, aptamers, peptides, and non-peptide small molecules. Of these, the cyclic peptide, PMX53 (3D53), was one of the first reported, and remains the most widely studied antagonist of C5aR1. Modelled off of the first full antagonist of C5aR1 reported by Merck in 1994 (Konteatis et al. 1994), this peptide is a highly potent and stable non-competitive inhibitor of C5a-C5aR1 activation. This drug can be administered via a wide variety of routes including orally, and provides long-term inhibition of C5aR1 signalling (Seow et al. 2016). As such, it has been utilised extensively in animal studies, significantly expanding our knowledge of C5aR1 in disease. The efficacy of PMX53 has been reported in preclinical animal studies for the treatment of a multitude of inflammatory pathologies, including (but most definitely not limited to) inflammatory arthritis, ischemia- reperfusion injuries, sepsis, inflammatory bowel disease, and neurological disorders (Li et al. 2014; Woodruff et al. 2006; Woodruff, Nandakumar, and Tedesco 2011; Woodruff et al. 2003; Woodruff et al. 2002). Translation of these results to the clinic however has been poor. Early phase Ib/IIa trials for the treatment of rheumatoid arthritis found PMX53 to be safe and well tolerated when administered orally and topically, but had no clear efficacy in improving patient outcomes (Vergunst et al. 2007). Factors such as poor oral bioavailability, low patient numbers, short trial duration, and concomitant therapy with methotrexate and prednisone, have been attributed as potential reasons for PMX53’s lack of efficacy in these clinical studies (Woodruff, Nandakumar, and Tedesco 2011). A modified version of PMX53, PMX205, has been more recently developed, with enhanced lipophilicity, gastrointestinal stability, and in vivo potency (Woodruff et al. 2005). The increased lipophilicity of PMX205 also allows for a large distribution to the brain and spinal cord, making it a

41 promising future therapeutic for the treatment of neurodegenerative disorders (Lee et al. 2017; Brennan et al. 2015; Woodruff et al. 2006; Fonseca et al. 2009). Whilst this utility is strongly supported by animal studies, human trials have yet to commence.

The non-peptidic C5aR1 inhibitor, CCX168 (Avacopan), is the only other reported C5aR1 antagonist to enter Phase II clinical trials to date (Woodruff, Nandakumar, and Tedesco 2011). In contrast to PMX53/205, this compound is a competitive inhibitor of C5aR1, and thus prolonged blood exposure of drug is required to maintain C5aR1 inhibition (Bekker et al. 2016). Phase II clinical trials for CCX168 have reported success in reducing glucocorticoid requirements in the treatment of ANCA vasculitis (Jayne et al. 2017). Clinical trials of CCX168 have remained focussed on autoimmune disorders with renal involvement, with current phase III trials for ANCA vasculitis (NCT02994927), and trials for aHUS (NCT02464891), IgA nephropathy (NCT02384317), and C3 glomerulopathy.

In more recent years, an increased understanding of GPCR structure has produced an innovative method of targeting C5aR1 through allosteric inhibition. DF2593A is a compound designed to target the allosteric “minor pocket” of C5aR1, which is presumed to be highly conserved between C5aR1 and chemokine receptors (Moriconi et al. 2014). DF2593A was shown to have good oral bioavailability, as well as the ability to cross the blood-brain barrier, inhibiting C5aR1 mediated nociceptive effects in mouse models of inflammation and nerve injury. Whilst still in preclinical development, DF2593A highlights the novel approaches being taken in the inhibition of C5a-C5aR1 signalling. Allosteric modulation may prove advantageous, with the potential to dampen C5aR1 signalling, reducing hyperactivity associated with disease, whilst permitting continuation of C5aR1 immune and physiological functions.

The development of antibody therapeutics targeting C5aR1 directly has also been explored. Of this class, the humanised monoclonal antibody NN0384 (full name, NNC0215-0384) has shown the greatest progression, with phase I clinical trials showing safety and tolerability of the drug (Wagner et al. 2014).

42 Table 1.4.2: Phase II/III clinical trials of C5a-C5aR1 targeted therapeutics under active development

Compound Target Class Disease Clinical Trial Number Status Phase ALXN1210 C5 Antibody Paroxysmal Nocturnal II NCT02946463 Ongoing Hemoglobinuria Paroxysmal Nocturnal II NCT03056040 Ongoing Hemoglobinuria Atypical Hemolytic II NCT02949128 Ongoing Uremic Syndrome LFG316 C5 Antibody Wet Age Related II NCT01535950 No results Macular Degeneration reported Wet Age Related II NCT01527500 No results Macular Degeneration reported Transplant Associated II NCT02763644 Ongoing Microangiopathy Paroxysmal Nocturnal II NCT02534909 Ongoing Hemoglobinuria Uveitis II NCT01526889 Ongoing Zimura C5 Aptamer Idiopathic Polypoidal II NCT02397954 No results Choroidal reported Vasculopathy Geographic Atrophy II NCT02686658 Ongoing Secondary to Dry Age- Related Macular Degeneration Coversin C5 Protein Paroxysmal Nocturnal II NCT02591862 Ongoing Hemoglobinuria IFX-1 C5a Antibody Early, Newly II NCT02246595 No results Developing Septic reported Organ Dysfunction Cardiac Surgery II NCT02866825 No results reported Hidradenitis II NCT03001622 Ongoing Suppurativa ALXN-1007 C5a Antibody Antiphospholipid II NCT02128269 No results Syndrome reported acute graft-versus-host II NCT02245412 Terminated - disease Unstated reason CCX168 C5aR1 Small aHUS II NCT02464891 Terminated Molecule Anti-Neutrophil III NCT02994927 Ongoing Cytoplasmic Antibody (ANCA)-Associated Vasculitis Immunoglobulin A II NCT02384317 No results Nephropathy reported

43 Targeting C3aR

Whilst the immunogenic potential of C5aR1 signalling has led to the production of an array of compounds with varied modalities for inhibition, the development of therapeutics for its upstream homologue, C3aR, remains limited. The full therapeutic potential of targeting C3a receptor signalling remains unclear, however, animal models have demonstrated the theoretical benefits for both inhibition and activation of C3aR in the clinical setting (Coulthard and Woodruff 2015). C3a-C3aR signalling has been demonstrated to have a dual function in the control of inflammation. In the acute phase, C3aR activation decreases the inflammatory response through prevention of leukocyte mobilisation (Wu et al. 2013; Nabizadeh et al. 2016). Conversely, in chronic inflammation, C3aR has been shown to be a driver of disease pathology. Chronic inhibition of C3aR has shown improved outcomes in a number of animal models including inflammatory arthritis, airway disease, and inflammatory bowel disease (Banda et al. 2012; Bera et al. 2011; Lajoie et al. 2010; Wende et al. 2013). C3aR inhibition may also have unexpected benefits in the treatment of cancer. C3aR activation has been shown to directly promote melanoma growth, whilst perturbing the host inflammatory response to favour tumour growth (Nabizadeh et al. 2016). Additionally, inhibition of C3a-C3aR signalling has been shown to maintain the blood-CSF barrier, preventing metastatic spread to the leptomeningeal space (Boire et al. 2017).

The further delineation of C3aR roles in disease has been hindered in part due to a poorer selection of pharmacological tools for the study of receptor function (Woodruff and Tenner 2015; Coulthard and Woodruff 2015). Currently, the only reported full antagonist of C3aR is the small molecule, SB290157. This drug has shown benefit in improving outcomes in multiple animal models (Gu et al. 2016; Rynkowski et al. 2009; Lian et al. 2015). However, both off target effects and full agonist activity of SB290157 have been reported for this drug (Woodruff and Tenner 2015), limiting the interpretation of results found with this antagonist. A casual review of the literature identifies the continued use of this molecule as the sole method for interpreting C3aR function. When not used in combination with other C3aR modulation techniques such as agonist or knockout studies, the results of such reports may be equally due to activation or inhibition of C3aR, or off target effects, and should be approached with caution. The continued use of this compound regardless of its caveats highlights the need for future development of a specific C3aR antagonist. This would allow for an uncompromised characterisation of the role for C3aR antagonism therapeutic preclinical studies. To date, a specific and effective C3aR inhibitor that can be used in animal models has not be described. Future production of such antagonists would also permit the study of effects of dual C5aR1/C3aR inhibition. Through the combined use, the beneficial reduction in inflammation could be increased, or therapeutic effect may be achieved at lower doses leading to reduced side effects.

44 As opposed to chronic inflammation, C3aR activation in acute injury has been reported to have an anti-inflammatory effect. In animal models of gut ischemia-reperfusion (IR) injury, the presence of C3aR restricted mobilisation of neutrophils, ameliorating intestinal IR pathology (Wu et al. 2013). The study also utilised a potent C3aR agonist, WWGKKYRASKLGLAR, to demonstrate a beneficial effect in wild type, but not C3aR knockout mice. Whilst potent and selective, this linear peptide is rapidly degraded in vivo, and requires parenteral administration reducing its usefulness in chronic animal models (Proctor et al. 2004). Neutrophils have been implicated as a key drivers of injury in a number of tissues (Schofield et al. 2013), as such, C3aR activation to reduce neutrophil driven pathology has great potential for clinical use. The therapeutic benefit of C3aR activation in acute injury was also recently demonstrated in an animal model of neonatal hypoxic-ischemic brain injury, with intranasal delivery of C3a beneficial in amelioration of injury-induced cognitive impairment (Moran et al. 2017).

More recently, peptides designed against the C-terminus of C5a with serendipitous specific affinity for C3aR have been reported (Halai et al. 2014). Additionally, the production of potent C3aR agonists via modelling of previous C3aR ligands has been reported (Reid et al. 2014). The same group have also reported the production of specific, small molecule, heterocyclic protein mimics of C3a with high potency for C3aR (Reid et al. 2013). These compounds have been shown to be effective in vitro, however, in vivo studies of pharmacokinetics and pharmacodynamics, which would determine the usefulness of these compounds as tools for C3aR study, are awaiting.

Targeting of C5aR2

The targeting of the second receptor for C5a, C5aR2 (C5L2), represents an interesting avenue for future therapeutic applications. Whilst sharing G-protein coupled receptor homology to C5aR1, this seven transmembrane receptor couples to β-arrestins, but not G-proteins (Bamberg et al. 2010). Originally described as a decoy receptor for C5a, C5aR2 has now been shown to signal through β- arrestins to act both as a negative regulator of C5aR1 signalling, perturbing C5aR1 second messenger signal transduction, and independently inhibiting the release of proinflammatory cytokines (Croker et al. 2016). Owing in part to the previously enigmatic functions of C5aR2, and a predominant focus on C5aR1, the potential for C5aR2 to be targeted therapeutically remains largely unexplored. To date, animal knockout studies have demonstrated an effect of C5aR2 modulation in spinal injury, allergic asthma, and sepsis (Biggins et al. 2017; Rittirsch et al. 2008; Zhang et al. 2010; Li et al. 2013).

45 As a negative regulator of C5aR1, targeting of C5aR2 either with or without C5aR1 antagonism may provide unique therapeutic advantages. The capacity of C5aR2 to reduce the cellular response to C5aR1 may restrict the progression of inflammatory disorders associated with C5aR1 hyper-activity, whilst allowing for physiological activity of C5aR1 in aspects such as wound healing and immune protection (Hawksworth, Coulthard, and Woodruff 2016). Additionally, the combination of C5aR2 activation with C5aR1 blockade may reduce dosing requirements, and therefore negative effects, of C5a-C5aR1 inhibitors. Pre-clinical research into such uses has been hindered by a lack of pharmacological tools to modulate C5aR2 signalling. Recently, the first selective agonists of C5aR2 have been reported, peptides P32 and P59, which have activity in vitro and in vivo (Croker et al. 2016). These drugs provide an important tool for the preclinical study of C5aR2 (Kemper 2016; Arbore et al. 2016).

In animal models of sepsis, a pro-inflammatory effect of C5aR2 has been described (Rittirsch et al. 2008). Here, C5aR2 knockout animals showed reduced cytokine production and improved survival, suggesting a pathological role of C5aR2 signalling in disease progression. Such results may highlight potential negative effects of C5aR2 activation, and considerations for any envisioned therapeutic use of C5aR2 agonists. Additionally, these results show the potential benefit of C5aR2 antagonism in clinical scenarios. To date however, no specific antagonist of C5aR2 capable for further study of these functions has been reported.

46 The future of anaphylatoxin targeted therapeutics

Therapeutic targeting of complement has long been proposed for a myriad of inflammatory disorders, however, the realisation of this potential has been relatively limited. Only one specific terminal complement therapeutic is currently approved, and only for orphan diseases to date. However, the range of novel complement targeted drugs now progressing to phase II and III clinical trials is rapidly increasing, perhaps heralding the relative imminence of an expanded market of approved complement therapeutics. In the realm of anaphylatoxin-targeted drugs, first generation compounds such as PMX53 have been superseded by the advancement of newer inhibitors of both C5a and C5aR1, which have shown greater clinical success than their predecessors. This growing arsenal of C5a-C5aR1 therapies across modalities including humanised antibodies, peptides, small molecules, and aptamers, leave the question not of if, but when, C5a-C5aR1 targeted therapeutics will be approved for treatment of both rare and common autoimmune and inflammatory diseases.

Of the other anaphylatoxin receptors, it is perhaps due to the predominant interest in C5aR1 that there remains only a trickle of studies for the development of C3aR and C5aR2 targeted agents. However, recently discovered compounds have been described with specific agonist activity for these receptors. Such drugs have great potential for therapeutic use both as sole agents and in combination with C5aR1 inhibitors, however their benefit remains to be demonstrated in preclinical studies. As such, in the toolbox of complement targeted agents, there remains a dire need for specific inhibitors of C3aR and C5aR2, which would greatly improve knowledge for the role of these receptors in disease, and may both have benefit for applications in specific clinical situations.

The targeting of anaphylatoxin signalling directly is advantageous over inhibition of upstream C3 or C5 factors, allowing for a specific blockade of disease driving receptors with potential benefits in efficacy of treatment, and reduced risk of life-threatening infection. The ever expanding understanding of these complement family members however, warns that significant negative effects may arise with long term use. Traditionally described as a regulator of innate immunity and inflammation, it is now clear that complement is involved in the regulation of a wide number of non- immune functions. For example, C3a and C5a signalling has been shown to play roles in embryogenesis, wound healing, and cell proliferation (Hawksworth, Coulthard, and Woodruff 2016; Coulthard et al. 2017). As such, long term inhibition may pose significant risks. Whilst long term data is still unavailable, it is promising that after a decade of use, no negative effects attributable to non-canonical complement activity have been described for eculizumab. However, the tissue distribution of the humanised monoclonal antibody may limit the risk such effects in systems such as the brain or in foetal development. With the advancement of future therapeutics with improved tissue

47 penetration, increased monitoring for potential adverse effects of non-immune complement inhibition would be warranted.

These off target effects may also prove unexpected strengths for future anaphylatoxin targeted inhibitors. For example, both C5aR1 and C3aR signalling have been shown to play unique roles in the control of a number of non-immune stem cell populations, including prenatal, adult, and cancer cells (Hawksworth et al. 2014; Hawksworth, Coulthard, and Woodruff 2016). In regulation of these cell populations, in vivo animal studies have shown benefit of C3aR modulation in the treatment brain injury (Järlestedt et al. 2013; Rahpeymai et al. 2006; Ducruet et al. 2012), and of both C3aR and C5aR1 modulation in the control of tumour growth (Nabizadeh et al. 2016; Corrales et al. 2012; Sayegh, Bloch, and Parsa 2014).

The development of anaphylatoxin targeted therapeutics remains an area of intense research, with new preclinical and clinical studies strengthening the position of this group of compounds. C5aR1 inhibition remains the most promising target, but there is now evidence that modulation of C3aR and C5aR2 signalling may provide unique clinical advantages. However two decades after the development of the first full C5aR1 antagonist, the realisation of direct C5a-C5aR1 targeted therapies in the clinical is still pending. Nevertheless, with ongoing phase 3 trails, the nebulous future of anaphylatoxin inhibitors in reaching their long regarded therapeutic potential remains ever promising.

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56 1.5 Pluripotent Stem Cells

Human pluripotent stem cells (PPSCs), including both human embryonic stem cells (hESCs) and human induced pluripotent stem cells (hiPSCs), represent a powerful tool in scientific research. Thomson and colleagues generated the first hESC line in 1998 through the isolation and culture of inner cell mass cells from preimplantation human blastocysts (Thomson et al. 1998). This was followed more recently by Takahashi and colleagues (2007), generating hiPSCs through the viral transduction of adult human fibroblasts with four transcription factors, Oct3/4, Sox2, c-Myc and Klf4, inducing the cells to reprogram back into a hES-like pluripotent state (Takahashi et al. 2007). The capability of PPSCs to self-renew indefinitely, whilst maintaining the ability to form any cell type in the human body, makes them amenable to a wide number of applications. This includes developmental modelling, tissue engineering, disease modelling, and drug design and development (Zhu and Huangfu 2013; Yap et al. 2015). This thesis is focussed on the first of these, utilising PPSCs to recapitulate aspects of human development in vitro to gain insights into the role of C5aR1 in human development.

Prior to the advent of PPSCs, the majority of our knowledge of human development was extrapolated from model organisms such as mouse, fruit fly, and zebrafish. These organisms are powerful tools in developmental research, setting the foundation for our knowledge in embryogenesis, and defining the function of genes and signalling pathways that control development. However, species-species variation limits the application of discoveries in animal models to the human environment (Milet and Monsoro-Burq 2012; Zhu and Huangfu 2013). This also applies to the complement system, with divergent evolution between rodent an primate species leading to alterations in expression and function of complement family members. The most striking example of this is seen in the receptors for C3 fragments, CR1, CR2, CR1-related gene/protein Y (Crry), and CD46. In humans, the receptors CR1 and CR2 are encoded by separate genes, with separate functions in the regulation of complement immunity (Jacobson and Weis 2008). In mice however, these receptors are formed via splicing of a single gene, with expression limited to B cells and follicular dendritic cells (Jacobson and Weis 2008). Additionally, mouse expression of CD46 is restricted to the testis where it plays a role in the acrosome reaction. In humans, CD46 is expressed on almost all cell types, with functions as a complement regulator as well newly discovered roles in T-cell biology (Yamamoto et al. 2013). In mouse, the complement regulatory functions of human CD46 and CR1 are performed by Crry, which is not expressed in humans. With regards to C5aR1, the traditional function of this receptor in innate immunity appears to be conserved between species, however, conservation of non-immune functions

57 of C5aR1 has not been established. It is here where PPSCs provide an exciting platform for the discovery of novel functions of complement, but also to correlate complement functions seen in animal models to the human environment. In this thesis, we have used PPSCs to gain insights into the expression and function of C5aR1 in three developmental stages; in pluripotent stem cells, in neural progenitor cells, and in post-mitotic cortical neurons.

Neural Differentiation of PPSCs

This thesis has utilised PPSCs as a model of human neurons, as such, it is important to introduce some of the significant aspects of neural induction of PPSCs. During mammalian development, a concert of molecular signals direct the progression of cells through germ layer and neurectoderm formation, to create specific subsets of adult neurons. Both animal and human studies have progressed the understanding of some of these vital signalling mechanisms, allowing for the development of chemically defined growth environments to provide the molecular cues for PPSCs to form neurons in vitro.

Whilst a number of methods are available for PPSC derived neuron generation, the most utilised, with consistent results and high efficiency, is that of dual SMAD inhibition. First described by Chambers and colleagues (Chambers et al. 2009), the timed addition of two inhibitors of SMAD signalling such as noggin and SB431542, restricts PPSC differentiation down mesoderm and endoderm lineages, guiding the cells towards neuronal specification. Refinement of this protocol has resulted in a high efficiency generation of neural lineage cells, with the resultant culture approaching 100% neurons or glia (Shi et al. 2012a). During differentiation, PPSCs have been demonstrated to progress through a number of vital stages of in vivo mammalian neuronal differentiation. At the initiation of differentiation, PPSC colonies thicken and form a columnar cell layer similar to the embryonic neural plate (Krencik and Zhang 2006; Germain et al. 2010). In the embryo, the neural plate then undergoes a number of morphogenic changes to form the neural tube. This is achieved via a number of simultaneous and co-ordinated processes including apical constriction, actomyosin contraction, cell adhesion, proliferation, and convergent extension (Wallingford 2005). Similar processes can be visualised in vitro, with acquisition of apico-basal polarity and emergence of early neural rosettes from the thickened columnar cell layer (Elkabetz et al. 2008). The culture of rosettes in the presence of retinoids directs them towards a cortical progenitor fate (Shi et al. 2012b).These cortical rosettes display characteristics analogous to the cortical ventricular zone. This includes analogous apico-basal polarity, with localisation of proteins such as prominin, ZO-1, and N-Cadherin to the apical surface

58 of rosettes (Shi et al. 2012b). Furthermore, the characteristic interkinetic nuclear migration of ventricular zone cells is seen in the neural progenitor cells of rosettes (Shi et al. 2012b; Ziv et al. 2015). The nuclei of rosette neural progenitors shows cell cycle dependent localisation between basal and apical surfaces, with symmetric apical M phase division yielding two rosette progenitor cells, whilst asymmetric division at the basal surface of results in loss of apical attachment, and migration and maturation of neural progenitors.

Figure 1.5.1 Differentiation of hPSCs to neurons. Graphical representation of the differentiation protocol for the generation of cortical neurons and glia. After 10 days of dual SMAD inhibition, human pluripotent stem cells (hPSCs) have progressed to form neuroepithelial progenitors. With further maturation in the presence of retinoids, formation of cortical rosettes and later, mature neurons and glia, is seen.

Continued culture of these neural progenitors allows for progressive maturation of neurons, resulting in cultures of excitatory glutamatergic neurons and glia. This includes spontaneous and induced depolarisation of neurons, with the formation of functional synapses between neuronal cells (Shi et al. 2012b). Whilst the efficient derivation of more specific neuronal subtypes represents an ongoing area of research, it has been shown that subtypes such as dopaminergic and motor neurons can be

59 enriched for in neuronal culture (Wilson and Stice 2006). In this thesis, we utilise an adaptation of the dual SMAD inhibition protocol to generate both neural rosettes and post-mitotic neurons for the investigation of C5aR1 expression and function in these cell populations.

References

Chambers, Stuart M., Christopher A. Fasano, Eirini P. Papapetrou, Mark Tomishima, Michel Sadelain, and Lorenz Studer. 2009. 'Highly efficient neural conversion of human ES and iPS cells by dual inhibition of SMAD signaling', Nature biotechnology, 27: 275-80. Elkabetz, Y., G. Panagiotakos, G. Al Shamy, N. D. Socci, V. Tabar, and L. Studer. 2008. 'Human ES cell-derived neural rosettes reveal a functionally distinct early neural stem cell stage', Genes Dev, 22: 152-65. Germain, N., E. Banda, and L. Grabel. 2010. 'Embryonic stem cell neurogenesis and neural specification', J Cell Biochem, 111: 535-42. Jacobson, Amanda C., and John H. Weis. 2008. 'Comparative Functional Evolution of Human and Mouse CR1 and CR2', Journal of Immunology (Baltimore, Md. : 1950), 181: 2953-59. Krencik, Robert, and Su-Chun Zhang. 2006. 'Stem cell neural differentiation: a model for chemical biology', Current Opinion in Chemical Biology, 10: 592-97. Milet, C., and A. H. Monsoro-Burq. 2012. 'Embryonic stem cell strategies to explore neural crest development in human embryos', Dev Biol, 366: 96-9. Shi, Y., P. Kirwan, and F. J. Livesey. 2012a. 'Directed differentiation of human pluripotent stem cells to cerebral cortex neurons and neural networks', Nat Protoc, 7: 1836-46. Shi, Yichen, Peter Kirwan, James Smith, Hugh P. C. Robinson, and Frederick J. Livesey. 2012b. 'Human cerebral cortex development from pluripotent stem cells to functional excitatory synapses', Nat Neurosci, 15: 477-86. Takahashi, K., K. Tanabe, M. Ohnuki, M. Narita, T. Ichisaka, K. Tomoda, and S. Yamanaka. 2007. 'Induction of pluripotent stem cells from adult human fibroblasts by defined factors', Cell, 131: 861-72. Thomson, J. A., J. Itskovitz-Eldor, S. S. Shapiro, M. A. Waknitz, J. J. Swiergiel, V. S. Marshall, and J. M. Jones. 1998. 'Embryonic stem cell lines derived from human blastocysts', Science, 282: 1145-7. Wallingford, J. B. 2005. 'Neural tube closure and neural tube defects: studies in animal models reveal known knowns and known unknowns', Am J Med Genet C Semin Med Genet, 135c: 59-68.

60 Wilson, P. G., and S. S. Stice. 2006. 'Development and differentiation of neural rosettes derived from human embryonic stem cells', Stem Cell Rev, 2: 67-77. Yamamoto, Hidekazu, Antonella Francesca Fara, Prokar Dasgupta, and Claudia Kemper. 2013. 'CD46: The ‘multitasker’ of complement proteins', The International Journal of Biochemistry & Cell Biology, 45: 2808-20. Yap, May Shin, Kavitha R. Nathan, Yin Yeo, Lee Wei Lim, Chit Laa Poh, Mark Richards, Wei Ling Lim, Iekhsan Othman, and Boon Chin Heng. 2015. 'Neural Differentiation of Human Pluripotent Stem Cells for Nontherapeutic Applications: Toxicology, Pharmacology, and In Vitro Disease Modeling', Stem Cells International, 2015: 11. Zhu, Z., and D. Huangfu. 2013. 'Human pluripotent stem cells: an emerging model in developmental biology', Development, 140: 705-17. Ziv, Omer, Assaf Zaritsky, Yakey Yaffe, Naresh Mutukula, Reuven Edri, and Yechiel Elkabetz. 2015. 'Quantitative Live Imaging of Human Embryonic Stem Cell Derived Neural Rosettes Reveals Structure-Function Dynamics Coupled to Cortical Development', PLOS Computational Biology, 11: e1004453.

61

2. The role of C5aR1 in pluripotency

Complement C5a Promotes Human Embryonic Stem Cell Pluripotency in the Absence of FGF2 Owen A. Hawksworth1, Liam G. Coulthard1, Stephen M. Taylor1, Ernst J. Wolvetang2,*, Trent M. Woodruff1,*

1School of Biomedical Sciences, The University of Queensland, St Lucia, Brisbane, QLD, 4072, Australia

2Australian Institute for Bioengineering & Nanotechnology, The University of Queensland, St. Lucia, Brisbane, QLD, 4072, Australia

Published in Stem Cells

62 Abstract The complement activation product, C5a, is a pivotal member of the innate immune response; however, a diverse number of non-immune functions are now being ascribed to C5a signalling, including roles during embryonic development. Here we identify the expression of the C5a precursor protein, C5, as well as the C5a receptors, C5aR and C5L2, in both human embryonic stem cells (hESCs) and human induced pluripotent stem cells (hiPSCs). We show that administration of a physiologically relevant dose of purified human C5a (1nM) stimulates activation of ERK1/2 and AKT signalling pathways, and is able to promote maintenance of pluripotency in the absence of FGF2. C5a also reduced cell loss following dissociation of human pluripotent stem cells. Our results reveal that complement C5a signalling supports human stem cell pluripotency and survival, and thus may play a key role in shaping early human embryonic development.

63 Introduction The complement system is a fundamental component of the innate immune response, traditionally associated with the protection of the host against foreign pathogens through the recruitment and activation of immune cells to sites of infection or injury (Ricklin and Lambris 2013; Woodruff et al. 2009). More recently, varied and complex roles for complement are being uncovered, including roles in tissue regeneration and cell survival, as well as in embryonic and fetal development (Strey et al. 2003; Kimura et al. 2003; Sayah et al. 2003; Tse et al. 2008; Usami et al. 2010; Denny et al. 2013b).

Complement factor C5 is a major and central member of the complement system. C5 remains inactive until cleaved by complement convertases, or cell-derived proteases, to generate the fragment C5a, a potent inflammatory mediator and key component of the innate immune response (Guo and Ward 2005; Manthey et al. 2009; Pavlovski et al. 2012). This anaphylatoxin elicits its effects primarily through binding the G-protein coupled receptor, C5aR, and subsequent activation of cell specific signalling pathways, including ERK1/2 and AKT pathways (Sayah et al. 2003; Schraufstatter et al. 2009). C5a can also bind to a second receptor, C5L2, which, though structurally homologous to C5aR, is not G-protein coupled. As such, the role for C5L2 in C5a mediated-functions is yet to be conclusively demonstrated (Li et al. 2013).

We recently identified that C5aR is present during prenatal development, facilitating neural tube closure in mouse models of folic acid deficiency(Denny et al. 2013a). However, it is not yet known how early in development C5a signalling occurs, and whether such roles extend to human embryonic development. The present study thus utilised human embryonic stem cells (hESCs) and human induced pluripotent stem cells (hiPSCs) to determine a potential involvement of C5a signalling in early human embryogenesis.

64 Materials & Methods Cell Culture hESCs and hiPSCs were maintained on Matrigel (BD Biosciences, San Diego, CA, http:/www.bdbiosciences.com) coated dishes in mouse embryonic fibroblast conditioned KSR medium (Dulbecco’s modified Eagle’s medium (DMEM)/F12 supplemented with 20% knockout serum replacement (KOSR), 0.1 mM non-essential amino acids, 1 mM L-glutamine, 0.1 mM β- mercaptoethanol, and 10ng/ml human basic fibroblast growth factor (FGF2)) as previously described(Briggs et al. 2013) (all sourced from Life Technologies, Carlsbad, CA, http://www.invitrogen.com). For some experiments, cells were treated with purified human C5a (1nM; Comptech, Tyler, TX, http://www.complementtech.com) (Halai et al. 2012), and the C5aR antagonist, AcF-[OPdChaWR] (PMX53) (Woodruff et al. 2011).

Immunocytochemistry hPSCs were fixed in 4% paraformaldehyde (Sigma-Aldrich, St. Louis, MO, http://www.sigmaaldrich.com) for 20min, permeabilised with 0.1% Triton-X-100 (Sigma-Aldrich) for 20min, blocked with 4% goat serum in phosphate buffered saline (PBS) (Life Technologies) for 30min. Primary antibodies C5 (1:500 Hycult Biotech, Uden, The Netherlands, http://www.hycultbiotech.com), C5aR (1:250, AbD Serotec, Kidlington, UK, http://www.abdserotec.com), C5L2 (clone 4C8; 1:500, gift from Charles Mackay, Monash University, Melbourne, VIC, Australia) or isotype control antibodies (Life Technologies) were applied overnight at 4°C. After washing with PBS, samples were incubated with Alexa Fluor- conjugated secondary antibodies (1:1000, Invitrogen, overnight 4°C), counterstained (1µg/ml 4',6- diamidino-2-phenylindole (DAPI) for 5 min) and mounted using Prolong Gold (Invitrogen). Samples were imaged using an Olympus BX61 confocal microscope (Olympus, Tokyo, Japan, http://www.olympus-global.com).

Reverse Transcriptase Polymerase Chain Reaction (RT-PCR) mRNA was obtained using ISOLATE RNA Mini Kit (Bioline, London, UK, http://www.bioline.com) and cDNA synthesised using iScript Select cDNA Synthesis Kit (Bio-Rad, Hercules, CA, http://www.bio-rad.com). RT-PCR was performed using MyTaq Red Mix (Bioline) using the following primer sequences: C5 fwd GTGGCATTAGCAGCAGTGGACAGTG, C5 rev GCAGGCTCCATCGTAACAACATTTC; C5aR1 fwd TCCTTCAATTATACCACCCCTGA, C5aR1 rev GGAAGACGACTGCAAAGATGA; GPR77 fwd CCTGGTGGTCTACGGTTCAG, GPR77 rev GGGCAGGATTTGTGTCTGTT; ACTB fwd ATGATGATATCGCCGCGCTC, ACTB

65 rev GCGCTCGGTGAGGATCTTCA. RT-PCR products were separated on a 1% w/v agarose gel and visualised with ethidium bromide staining under UV light.

Flow Cytometry and Sorting Flow cytometry was performed on a BD CSampler Accuri C6 flow cytometer (BD Biosciences) as previously described(Laslett et al. 2007) using anti-C5aR (1:250, AbD Serotec) and anti-OCT4 (1:400, Merck Millipore, Darmstadt, Germany, http://www.millipore.com) primary antibodies. For sorting, pluripotent hPSCs cells were harvested using TrypLE (Invitrogen), live stained with TRA- 160 antibodies (1:400, Merck Millipore) and sorted using FACS Vantage equipment (BD Biosciences).

Enzyme-linked Immunosorbent Assay (ELISA) ELISA for human C5a was performed on hPSC lysates using previously described methods(Pavlovski et al. 2012) with anti-C5a and biotinylated anti-C5a antibodies (both 1:500, R&D Systems, Minneapolis, MN http://www.rndsystems.com).

Western Blot Analysis Western blots were performed as described previously (Shinjyo et al. 2009) using anti-phospho- p44/42 or anti-phospho-AKT antibodies and total-p44/42 and total-AKT antibodies (all 1:1000, Cell Signalling Technology, Beverly, MA http://www.cellsignal.com). hESCs were serum starved for 6 hours in DMEM/F12 (Life Technologies) + 0.25% BSA (Invitrogen) after which C5a (1nM) or vehicle control were added. Samples were collected at 0, 5, 10, 30 and 60min post drug addition using RIPA lysis buffer containing protease and phosphatase inhibitor cocktails (all from Thermo Fisher Scientific, Waltham, MA, http://www.thermofisher.com). Cell lysates were collected and protein concentration quantified using a bicinchoninic acid assay (Thermo Fisher). Protein samples were solubilized in SDS-PAGE sample buffer (62.5 mM Tris-HCl, pH 6.8, 5% β-mercaptoethanol, 2% SDS, 5% sucrose, 0.005% bromophenol blue) and incubated at 95°C for 5min. Proteins were separated on 12.5% gels followed by transfer onto a polyvinylidene fluoride membrane. Membranes were blocked in 5% BSA in TBS-Tween for 1 hour at room temperature and incubated with anti- phospho-p44/42 or anti-phospho-AKT antibodies in blocking buffer overnight at 4°C. Anti-rabbit HRP conjugate incubation was then performed for 2 hours at room temperature followed by chemiluminescent detection (GE Healthcare, Little Chalfont, UK, http://www.gehealthcare.com) and exposure to x-ray film for visualisation of protein bands. Membranes were then stripped and re- probed for total-p44/42 and total-AKT (both 1:1000, Cell Signalling), to which phosphorylated

66 protein levels were normalised and analysed using NIH ImageJ software v1.47 (http://rsbweb.nih.gov/ij/).

Pluripotency Assay After adaption to culture in mTESR medium (Stem Cell Technologies, Vancouver, Canada http://www.stemcell.com), cells were cultured for 10 days in FGF2-free mTeSR, in the presence or absence of 1nM C5a, 10ng/ml FGF2, or vehicle control. Pluripotency was assessed in EOS-EGFP pluripotency reporter hESC16 by GFP flow cytometry, and in hESC using flow cytometric quantification of Oct-4 following cell dissociation with TrypLE (Invitrogen).

Dissociation induced apoptosis assay Dissociation induced apoptotic events were quantified as described17 using CyQuant DNA dye (Invitrogen) according to the manufacturer’s protocol.

Statistical Analyses Graphing and statistics were performed using GraphPad Prism Software 6.0c (GraphPad Software, LaJolla, CA, http://www.graphpad.com/), using Student’s t test and one-way ANOVA with Dunnett post-test for the relevant statistical analysis.

67 Results and Discussion

C5, C5aR and C5L2, are Expressed in Pluripotent Stem Cells. To determine if C5 and C5a receptors are present in human pluripotent stem cells we performed RT-PCR analysis of TRA-160 sorted hPSCs (three hESC and two hiPSC lines) and identified robust expression of C5, C5aR and C5L2 in all lines, with higher levels of C5L2 in HES3 and MEL2 hESCs (Fig. 1A). Protein translation was confirmed by immunocytochemistry in hESC (H9) and hiPSC lines (Fig. 1B), revealing punctate staining for C5 and C5L2 and more diffuse staining for C5aR. Flow cytometry demonstrated uniform expression of C5aR in the majority of cells (Fig. 1C&D). The active C5 fragment, C5a, was detected by ELISA in both hESC (7.5±0.2 ng/ml) and hiPSC (6.6±0.3 ng/ml) cell lysates (Fig. 1E).

C5a Activates ERK1/2 and AKT Signalling. We next aimed to determine if these C5a receptors were functionally coupled, administering purified human C5a and examining for phosphorylation of ERK1/2 or AKT proteins, two members of second messenger signalling families through which C5aR is known to signal and be of importance in adult stem cell biology(Schraufstatter et al. 2009). We found that a low physiological dose (1nM) of C5a resulted in a significant and transient increase in of ERK1/2 protein phosphorylation, peaking to a 6-fold increase between 5 to 10 min, and subsiding by 30 min post-stimulation (Fig. 2A). This level of activation was comparable to that induced by FGF2, a pivotal hESC signalling protein, suggesting C5a elicited a biologically relevant cellular response. Pre-treatment with the specific C5aR antagonist PMX53(Woodruff et al. 2011) prior to C5a addition was able to inhibit this response, demonstrating that ERK1/2 phosphorylation was mediated through C5aR. A similar activation profile was observed for AKT phosphorylation (Fig 2B), however, this was not significantly inhibited by PMX53, suggesting an alternate route of activation, potentially through the second C5a receptor, C5L2. In order to determine whether an increased concentration of C5a may potentiate second messenger phosphorylation, we next examined AKT phosphorylation at 10 and 30min with both 1nM and 10nM C5a (Fig. 2D). No increase in either phosphorylation level or duration was detected. hiPSCs were also examined for second messenger activation, with a similar profile to hESC observed for AKT phosphorylation (Fig. 2C).

68

Figure 1: Expression of complement factors C5, C5aR and C5L2 on hESC and hiPSC. (A) RT- PCR analysis for mRNA expression of the complement factors C5, C5aR and C5L2. Expression of the complement factors was detected across all hESC (H9, HES3, MEL2) and hiPSC (C11, C32) lines examined. The monocytic cell line, U937, used as a positive control, and no template (-ve) control, are also shown. Minus reverse transcriptase (-RT) controls were also performed (not shown) (B) Immunocytochemical detection of complement proteins C5, C5aR and C5L2, and the pluripotent marker OCT4, in both hESCs (H9) and hiPSCs (C11). Images display both the relevant protein of interest (green) and the nuclear stain DAPI (blue). Scale bars = 10 µm. (C&D) Flow cytometry results for the hESC line, H9, demonstrating uniform expression of C5aR within the hPSC population.

69

Figure 2: C5a receptor activation results in transient phosphorylation of ERK and AKT signalling proteins in the hESC line, H9. (A) ERK1/2 and AKT phosphorylation was induced by 1nM C5a, peaking between 5-10min and subsiding by 30min. ERK1/2 phosphorylation was inhibited by the C5aR antagonist, PMX53 (1µM), whilst AKT phosphorylation was unaffected. Levels of phosphorylation were comparable to 10ng/ml FGF2. Error bars represent SEM (n=3); *, p < .05; **, p <0.01; ***, p <0.001

70 C5a Promotes Pluripotency. Since FGF2-induced ERK1/2 signalling is indispensable for the maintenance of pluripotency, we next investigated whether C5a was able to support pluripotency in the absence of FGF2. Using a defined culture medium devoid of FGF2 (mTeSR) we assessed the ability of 1nM C5a to maintain pluripotency over a 10 day period as compared to 10ng/ml FGF2 using a HES3 hESC line stably transfected with the EOS-GFP pluripotency reporter(Titmarsh et al. 2013). As expected, strong GFP expression was maintained in the FGF2 treated cells, whilst in the absence of FGF2, GFP expression was gradually lost (Fig 3A). Intriguingly, both morphology (Fig 3A) and flow cytometric quantification of GFP expression (Fig 3B) showed that daily C5a (1nM) supplementation caused a significant increase in GFP-positive pluripotent cells (69±2.9%), as compared to vehicle control treated cells (51±6.4%). To verify these data we assessed OCT-4 protein expression by immunostaining and FACS in the genetically unmodified H9 hESC line following 7- day culture in the presence or absence of C5a. We again detected significant increase in OCT-4 positive pluripotent cells (53±3.6%) in the C5a-treated groups as compared to vehicle controls (32±0.6%) (Fig. 3C&D). This result was repeatable in hiPSCs, with a significant increase in OCT-4 positive cells (53±1.5%) in the C5a-treated groups as compared to vehicle controls (43±2.1%) (Fig. 3F). We conclude that C5a is able to substitute, at least in part, for FGF2 in maintaining pluripotency of hESC, likely through C5aR-mediated activation of ERK1/2.

As previously stated, C5a was detected in hPSC lysates, raising the question of endogenous C5aR activation. The C5a-mediated increase in OCT-4 positive pluripotent cells was able to be inhibited by the specific C5aR antagonist, PMX53 (Fig. 3E), demonstrating a C5aR mediated response; however, the addition of PMX53 alone had no effect on OCT-4 positive cells, suggesting the previously detected endogenous C5a was not able to interact with C5aR in the basal hPSC state.

Evidently, daily addition of a low concentration of C5a is unable to facilitate continued maintenance in the absence of FGF2. This may suggest that either C5a signalling alone is insufficient to supplant FGF2 in maintenance of pluripotency of hESCs, or potentially, that a single daily C5a dose is unable to induce sufficient and repeated activation of ERK signalling due to factors such as receptor tachyphylaxis and/or C5a degradation(Webster et al. 1982; Naik et al. 1997). Indeed, due to the relatively rapid degradation of FGF2 in culture, high FGF2 concentrations are necessary to ensure sufficient ligand concentrations over time for continued ERK1/2 activation(Chen et al. 2012); and less stable forms of FGF, such as FGF1, are only able to maintain pluripotency when added at increased frequency (Chen et al. 2012). Higher concentrations of C5a (10nM) were not able to potentiate the observed phenotype (Fig. 3E); however, as C5a is a short-lived peptide in plasma, and is relatively instable in culture(Scola et al. 2009; Webster et al. 1982), it is plausible that increased frequency of C5a administration, or the development of stable C5a agonists may be able to supplant this deficit.

71 Figure 3: C5a promotes pluripotency in hESC in the absence of FGF2. (A) Representative images of HES3 EOS (OCT4/SOX2 GFP reporter) line at 0 and 10 days in custom mTeSR medium in the presence or absence of C5a (1nM) or FGF2 (10ng/ml). GFP-positive cells (green) represent those which remain pluripotent. Scale bars = 250 µm (B) Flow cytometry of cells shown in (A) for GFP positive cells at day 10. A significant increase in remaining pluripotent cells was seen in the C5a (1nM) group in comparison to the vehicle control (n=4). (C&D) Similar results were seen in the hESC line, H9. Representative histogram and quantification of results are shown for remaining OCT- 4 positive cells as detected by immunostaining and flow cytometry. A significant increase in OCT-4 positive cells in the C5a (1nM) group in comparison to vehicle control was observed. Data in B&D are normalised to the FGF2 response for each experiment. Error bars represent SEM (n=3 independent experiments); *, p < 0.05.

72 C5a Increases Single Cell Survival. Dissociation of hPSCs to single cells results in extensive apoptosis(Chen et al. 2010; Ohgushi et al. 2010) due to loss of E-cadherin mediated cell-cell contact and subsequent activation of rho-associated protein kinase (ROCK) signalling(Ohgushi et al. 2010). Since C5a can affect regulation of the ROCK pathway, surface expression of integrin and cadherin family members, and, independent from these functions, can act as a pro-survival factor(Morris et al. 2011; Liu et al. 2011; Strainic et al. 2008; Ulfman et al. 2005), we next examined whether C5a could have a similar function in hPSC. We therefore treated H9 hESC with 1nM C5a, or vehicle alone, 1 hour prior to enzymatic single cell dissociation and quantified cell survival of these single cell dissociated cultures after 16 hours. A significant (P<0.001) 25% increase in cell number was observed in the C5a-treated group as compared to vehicle control (Fig. 4A), suggesting C5a receptor signalling also impacts cell survival following dissociation events. This result was repeatable in hiPSCs, with a significant increase in cell number observed in the C5a-treated group in comparison to the control (135.8±12.7%, Fig. 4B).

Figure 4: C5a increases cell number following single cell dissociation of hESC. H9 hESCs were enzymatically dissociated to single cells and plated following a 1 hour pre-treatment with 1nM C5a. After seeding overnight, total cell numbers were quantified using fluorescent DNA dye, and demonstrate C5a significantly increases cell survival following dissociation. Error bars represent SEM (n=5 independent experiments); ***, p <0.001

73 Conclusion

This study has identified expression of functional complement C5a receptors in hPSCs, and demonstrated a novel role for C5a in pluripotency and dissociation-induced apoptotic events. These studies demonstrate an unexpected role for this highly evolutionarily conserved innate immune pathway in very early developmental processes, and may inform the development of novel culture media for human pluripotent stem cells.

74 References

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76 Strey, C. W., M. Markiewski, D. Mastellos, R. Tudoran, L. A. Spruce, L. E. Greenbaum, and J. D. Lambris. 2003. 'The proinflammatory mediators C3a and C5a are essential for liver regeneration', Journal of Experimental Medicine, 198: 913-23. Titmarsh, D. M., D. A. Ovchinnikov, E. J. Wolvetang, and J. J. Cooper-White. 2013. 'Full factorial screening of human embryonic stem cell maintenance with multiplexed microbioreactor arrays', Biotechnol J, 8: 822-34. Tse, P. K., Y. L. Lee, W. N. Chow, J. M. C. Luk, K. F. Lee, and W. S. B. Yeung. 2008. 'Preimplantation embryos cooperate with oviductal cells to produce embryotrophic inactivated complement-3b', Endocrinology, 149: 1268-76. Ulfman, L. H., J. Alblas, C. W. van Aalst, J. J. Zwaginga, and L. Koenderman. 2005. 'Differences in potency of CXC chemokine ligand 8-, CC chemokine ligand 11-, and C5a-induced modulation of integrin function on human eosinophils', J Immunol, 175: 6092-9. Usami, Makoto, Katsuyoshi Mitsunaga, Atsuko Miyajima, Momoko Sunouchi, and Osamu Doi. 2010. 'Complement component C3 functions as an embryotrophic factor in early postimplantation rat embryos', International Journal of Developmental Biology, 54: 1277-85. Webster, R. O., G. L. Larsen, and P. M. Henson. 1982. 'In vivo clearance and tissue distribution of C5a and C5a des arginine complement fragments in rabbits', J Clin Invest, 70: 1177-83. Woodruff, T. M., K. S. Nandakumar, and F. Tedesco. 2011. 'Inhibiting the C5-C5a receptor axis', Mol Immunol, 48: 1631-42. Woodruff, Trent M., Rahasson R. Ager, Andrea J. Tenner, Peter G. Noakes, and Stephen M. Taylor. 2009. 'The role of the complement system and the activation fragment C5a in the central nervous system', Neuromolecular Medicine, 12: 179-92.

77 3. C5aR1 Signaling in Neural Progenitor Cells

Complement C5aR1 Signaling Promotes Polarization and Proliferation of Embryonic Neural Progenitor Cells through PKCζ.

Liam G. Coulthard* a,b, Owen A. Hawksworth* c,d,, Rui Lic, Anushree Balachandrand, John D. Leec, Farshid Sepehrbande,f, Nyoman Kurniawane, Angela Jeanesc, David G. Simmonsc, Ernst Wolvetangd,2 & Trent M. Woodruffc,2 aRoyal Brisbane and Women’s Hospital, Herston, QLD, Australia bSchool of Medicine, The University of Queensland, Herston, QLD, Australia cSchool of Biomedical Sciences, The University of Queensland, St Lucia, QLD, Australia dAustralian Institute for Bioengineering and Nanotechnology, The University of Queensland, St Lucia, QLD, Australia eCentre for Advanced Imaging, The University of Queensland, St Lucia, QLD, Australia fLaboratory of Neuro Imaging, USC Mark and Mary Stevens Neuroimaging and Informatics Institute, Keck School of Medicine, University of Southern California, Los Angeles, CA, USA.

*These authors contributed equally. 2Corresponding authors.

Published in Journal of Neuroscience

The work presented within this chapter represents the combined effort of a number of researchers. This has culminated in the publication of this research in the Journal of Neuroscience, for which the text of this chapter is of this final published work. The author contributions have been acknowledged and outlined in the preliminary pages.

78 Abstract

The complement system, typically associated with innate immunity, is emerging as a key controller of non-immune systems including in development, with recent studies linking complement mutations with neurodevelopmental disease. A key effector of the complement response is the activation fragment C5a which, through its receptor C5aR1, is a potent driver of inflammation. Surprisingly, C5aR1 is also expressed during early mammalian embryogenesis, however no clearly defined function is ascribed to C5aR1 in development. Here we demonstrate polarized expression of C5aR1 on the apical surface of mouse embryonic neural progenitor cells in vivo, and on human embryonic stem cell derived neural progenitors. We further show that signaling of endogenous C5a during mouse embryogenesis drives proliferation of neural progenitor cells within the ventricular zone, and was required for normal brain histogenesis. C5aR1 signaling in neural progenitors was dependent on atypical protein kinase C zeta (PKCζ), a mediator of stem cell polarity, with C5aR1 inhibition reducing proliferation and symmetric division of apical neural progenitors in human and mouse models. C5aR1 signaling was shown to promote the maintenance of cell polarity, with exogenous C5a increasing the retention of polarized rosette architecture in human neural progenitors following physical or chemical disruption. Transient inhibition of C5aR1 during neurogenesis in developing mice led to behavioral abnormalities in both sexes and MRI-detected brain microstructural alterations, in studied males, demonstrating a requirement of C5aR1 signaling for appropriate brain development. This study thus identifies a functional role for C5a-C5aR1 signaling in mammalian neurogenesis, and provides mechanistic insight into recently identified complement gene mutations and brain disorders.

79 Introduction

The key complement activation fragment, anaphylatoxin C5a, and its primary receptor, C5aR1, play pivotal roles in inflammation and immune defense. However, it is increasingly recognized that this evolutionarily ancient system also possesses unexpected roles in development, such as in morphogenesis, neurogenesis, migration, and neuronal synapse pruning (Hawksworth et al., 2016; Gorelik et al., 2017). Defects in complement signaling have been associated with neurodevelopmental abnormalities such as autism, schizophrenia, and 3MC syndrome (Corbett et al. 2007; Rooryck et al. 2011; Sekar et al. 2016)

Despite these emerging developmental roles of complement, the functional role of C5aR1 in embryonic development remains poorly defined. During organogenesis of Xenopus embryos, C5 is expressed in the neural plate of the developing nervous system (McLin et al. 2008), and in mice and humans, C5 and C5aR1 are expressed in the developing neural tube (Denny et al. 2013). Postnatally, C5a-C5aR1 expression continues in neural stem cells in vitro, is expressed in migrating neuroblasts in response to ischemia (Rahpeymai et al. 2006), and promotes the proliferation of progenitor cells within the external granular layer of the post-natal rat cerebellum (Benard et al. 2008). We also previously demonstrated that C5 and C5aR1 are expressed in human embryonic stem cells, and can regulate pluripotency (Hawksworth et al. 2014). This early embryonic expression pattern of C5aR1 in the absence of other factors of the canonical pathogen-initiated complement cascade (Jeanes et al. 2015), suggests that C5aR1 signaling has adopted additional roles in mammalian development beyond innate immunity. However, despite this clear expression of C5a receptors during brain development, a neurodevelopmental role for C5a remains poorly defined.

To investigate the role of C5aR1 in neural progenitor cell physiology we utilized both mouse models and human embryonic stem (hES) cells differentiated to a stage resembling the ventricular zone of the developing brain. In these hES-derived cultures, neural rosettes are formed that display apical polarization and interkinetic nuclear migration of periluminal cells, similar to that seen during neurulation and in the cortical ventricular zone (Shi et al. 2012; Ziv et al. 2015). The signaling mechanisms in the control of rosette polarity are highly conserved and the localization of the Par3/Par6/PKCζ complex to the apical membrane is essential for self-renewal of neural progenitors through the orchestration of the balance between symmetric and asymmetric division (Fietz and Huttner 2011). Here, we show that C5aR1 is a regulator of the apicobasal polarity of neural stem cells and that the acute pharmacological blockade of C5aR1 signaling during neurogenesis results in reduced ventricular zone proliferation and cerebral disorganization, leading ultimately to behavioral alterations. Collectively our data reveal that C5aR1 functions as a regulator of mammalian brain

80 development under normal physiological conditions in both mice and humans. This work complements recent studies documenting mutations in complement activation pathways that contribute to an increased risk of neurodevelopmental disorders.

81 Materials & Methods

Reagents

Mouse recombinant C5a (mC5a) was obtained from Sigma Aldrich and reconstituted in 0.25% BSA in PBS. Human isolated C5a (hC5a) was obtained from CompTech, USA. PMX53 was synthesized as previously described (Pavlovski et al. 2012), stored lyophilized and reconstituted in purified water before use.

Tissue Collection and Processing

All animal experiments in this study were performed with prior approval from the animal ethics committee of the University of Queensland. Animal housing and time-mating of mice was provided, with thanks, from University of Queensland Biological Resources. Tissues were collected after sacrifice by cervical dislocation. Tissues preserved for RNA/protein analysis were snap frozen in liquid nitrogen and stored at -80°C until extraction. Protein was extracted using modified RIPA buffer prepared in-house. Tissues used for histological analysis were incubated at 4°C overnight in freshly prepared 4% paraformaldehyde. Tissues were prepared for cryosection by sequential passaging through serial sucrose solutions (10%, 20%, 30%), removed into OCT for freezing and sectioned at 12μm, unless otherwise stated.

Embryonic cerebrospinal fluid (CSF) was obtained from E13.5 embryos using a pulled glass pipette attached to a vacuum. Pooled CSF from three litters was used in analysis of mC5a concentration through ELISA. CSF was treated with EDTA (5mM final concentration) to prevent coagulation and extrinsic complement activation, and stored at -80°C until analysis.

RT-PCR and qPCR

RNA was extracted using RNeasy plus spin columns (QIAGEN, The Netherlands) and treated for gDNA contamination using Turbo DNase (Life Technologies, USA). All RNA was additionally checked for gDNA contamination by PCR analysis. Primer sequences and PCR conditions can be found in Table 1. qPCR performed using SYBR green PCR mastermix (Ambion, USA) and machine settings according to the manufacturer's instructions. The ΔΔCt method to assess fold-change of gene expression was employed and all data points within an individual sample were referenced back to r18s expression levels.

82 Table 1: List of PCR primer sequences and conditions

Name Species Use Forward Reverse Annealing Product (5’-3’) (5’-3’) Temp size (°C) mC5aR1 Mouse RT- ATGCTGATGCTGATGCTGATCG ATGCTGATGGCTGATCGTCGGATGCTGAT 60 562bp PCR mActB Mouse RT- GTGGGCCGCCCTAGGCACCAG CTCTTTGATGTCACGCACGATTTC 60 103bp PCR mC5aR1 Mouse qPCR GGGATGTTGCAGCCCTTATCA CGCCAGATTCAGAAACCAGATG 60 131bp

mSox2 Mouse qPCR TAGAGCTAGACTCCGGGCGATGA TTTCGTGGTCTTGTTTAAGGCAA 60 296bp m18s Mouse qPCR GATCCATTGGAGGGCAAGTCT CCAAGATCCAACTACGAGCTT 60 103bp hC5AR Human qPCR TCCTTCAATTATACCACCCCTGA GGAAGACGACTGCAAAGATGA 60 139bp

hC5 Human qPCR ACTGAATTTGGTTGCTACTCCTC GTATTACTGGGACTCCTCCTACC 60 110bp hACTB Human qPCR GCGGGAAATCGTGCGTGACATT GATGGAGTTGAAGGTAGTTTGGTG 60 232bp

hCDH2 Human qPCR ATCAACCCCATACACCAGCC GTCGATTGGTTTGACCACGG 60 128bp

Western blot

Protein samples (20μg) were subjected to electrophoresis at 100V on a 10% polyacrylamide gel until good separation was achieved. Primary antibodies directed against C5aR1 (1:500, HBT clone 10/92, RRID:AB_10130226), phospho-Erk (1:1000, CST #9106, RRID:AB_331768), total-Erk (1:1000, CST #9102, RRID:AB_330744) and beta-tubulin (1:2000, Sigma Aldrich clone TUB2.1, AB_10679259) were diluted in 0.5x odyssey blocking buffer (LiCor, Germany) and incubated with the membrane rocking overnight at 4°C. Incubation with specific Licor odyssey secondary antibodies was carried out according to the manufacturer's instructions. Blots were imaged using the Licor odyssey system and software. Optical densitometry values were derived from analysis of the image in ImageJ (NIH, MD, USA, RRID:SCR_003070).

Immunofluorescence

Tissues or cells were blocked using 0.1% Triton X-100/4% goat serum in PBS for one hour. In the case of live staining for NE-4C cultures, primary antibody was added to unfixed cells on ice for 30 minutes prior to fixation. Primary antibodies raised against mC5aR1 (HBT clone 10/92, 1:200, RRID:AB_10130226), Pax6 (R&D #MAB1260, 1:500, RRID:AB_2159696), Phosphohistone H3 (CST #9706, 1:1000, RRID:AB_331749), doublecortin (CST #4604, 1:500, RRID:AB_561007), Sox2 (CST #3728, 1:500, RRID:AB_2194037), acetylated alpha-tubulin (Sigma Aldrich #T7451, 1:500, RRID:AB_609894), Zo-1 (Life Technologies, #402300, 1:500, RRID:AB_2533457), hC5aR1 (BD, # 550733, 3µg/mL, RRID:AB_393854), C5 (HBT, clone bb5.1, 1:250, RRID:AB_10992443), Tubb3 (Millipore, MAB1637, 1:1000, RRID:AB_2210524), NCAD (Sigma Aldrich, C3865, 1:2000, RRID:AB_262097), Arl13b (NeuroMab, 73-287, 1:200, RRID:AB_11000053), PKCζ (Abcam,

83 ab59412, 1:250, RRID:AB_946308) or isotype control antibodies were incubated overnight at 4°C. Appropriate alexafluor secondary antibodies (Invitrogen, USA, 1:1000) were incubated with the samples for 2 hours at room temperature before counterstaining (1μg/mL DAPI, 5 min) and mounting. For C5aR/PKCζ costaining, the issue of using two rabbit antibodies was circumvented with the use of conjugated Fab fragments and intermediate blocking with unconjugated Fab fragment (Jackson Lab, USA). All immunofluorescence images were acquired via confocal microscopy (DMi8, Leica Microsystems, Germany) and processed with ImageJ software. Further image analysis was performed with either ImageJ or CellProfiler (Broad Institute, MA, USA, RRID:SCR_007358) software, as stated in the relevant methods sections. mC5a ELISA

Maternal and embryonic brain sample concentrations were determined by BCA assay (ThermoScientific, USA). Aliquots of each sample were measured in technical triplicate for mC5a concentration by enzyme-linked immunosorbent assay (R&D systems, USA, RRID:AB_2067297) according to manufacturer's instructions. mC5a concentrations were normalized to protein concentration (ng/mg, brain samples) or volume (ng/mL, CSF).

Neurosphere culture

Telencephalon from litters of E14.5 C57BL6/J mice, RRID:IMSR_JAX:000664, were isolated and mechanically dissociated. Cells were maintained in DMEM/F12 media supplemented with 1x B27 supplement, L-glutamine 10ng/mL bFGF, 10ng/mL EGF and penicillin/streptomycin. Isolated human rosettes were maintained in N2B27 throughout the neurosphere assay. To assess the effect of C5aR1 modulation on neurosphere growth 103 cells at passage 3 were seeded into each well of a 96 well plate in the presence or absence of 10nM mC5a. Wells were imaged after one week in culture and the number and diameter of neurospheres assessed. Media was replaced every 48 hours. Before treatment with 10nM mC5a cells were deprived of growth factors (bFGF/EGF) for 6 hours.

NE-4C culture

NE-4C cells were acquired from the American Type Culture Collection (#CRL-2925, RRID:CVCL_B063) and expanded in MEM (Sigma Aldrich) supplemented with 10% FCS (Lonza, Switzerland), L-glutamine and Non-essential amino acids (Life Technologies, USA). For transwell culture, NE-4C cells were plated on poly-L-lysine coated 0.2μm transwell membranes in a 24-well plate. Cells were maintained in media as described above and treatment (mC5a or vehicle) was added to the upper compartment 12 hours before fixation for immunofluorescence.

84 Human embryonic stem cell culture and neuronal differentiation

H9 hES cells (RRID:CVCL_9773) were maintained on Matrigel (BD Biosciences, San Diego, CA) coated dishes in mouse embryonic fibroblast conditioned KSR medium (Dulbecco's modified Eagle's medium/F-12 supplemented with 20% Gibco KnockOut Serum Replacement, 0.1 mM nonessential amino acids, 1 mM l-glutamine, 0.1 mM β-mercaptoethanol, and 10 ng/ml human basic fibroblast growth factor [FGF2] - all sourced from ThermoFisher, USA) as previously described (Briggs et al. 2013). Neuronal induction was performed using an adapted method of dual SMAD inhibition (Chambers et al. 2009). Briefly, high density H9 cells were incubated for 10 days in N2B27 medium (1:1 mixture of DMEM/F-12 supplemented with N2 and Neurobasal medium supplemented with B27, 0.1 mM nonessential amino acids, 1 mM l-glutamine, 0.1 mM β-mercaptoethanol, 50 U/ml penicillin, and 50 mg/mL streptomycin) supplemented with 1 μM Dorsomorphin and 10 μM SB431542. At day 10, cultures were bulk passaged using 1 mg/mL dispase solution and seeded on Matrigel coated plates in N2B27 medium without Dorsomorphin and SB431542. The cultures passaged again using a similar technique at day 15, maintaining bulk and high density culture. Cells were supplemented with 2 ng/mL FGF2 from day 16 to day 22 to promote emergence and proliferation of rosettes. Using this method, rosettes began to emerge around day 16-18, reaching maturity 7 to 10 days later. In order to ensure purity of neuronal cultures, rosettes were manually harvested around day 24.

Human neural rosette experiments

Rosette cultures were single cell dissociated with Accutase (ThermoFisher, USA) and seeded at either high density (3.2x105 cells/cm2) or low density (1.2x105 cells/cm2) for subsequent experiments. At high density, 100% of cells re-formed rosettes, allowing for experimentation on a pure culture of uniformly sized rosettes. At low density, the ability of rosette re-formation was limited (see results), allowing for interrogation of the ability of C5aR1 signaling to promote reestablishment of rosettes over differentiation.

Low density single cells were grown for 7 days in the presence of 10 nM hC5a, 1 μM PMX53 + hC5a, or vehicle control, after which cells were fixed in 4% paraformaldehyde and stained for NCAD using the above immunocytochemistry methods protocol. Acquired images were analyzed using CellProfiler (RRID:SCR_007358) to quantify rosette number through the measurement and quantification of NCAD positive rosette lumens (Kamentsky et al. 2011).

High density single cells were cultured for 5 days to allow re-establishment of rosettes after which cells were tested in DAPT treatment and cell cycle progression experiments. For DAPT treatment, cells were pre-treated with 10nM hC5a or vehicle control for 1 hour, after which 1µM DAPT was 85 added. Cells were incubated overnight, after which they were fixed, stained for NCAD, imaged, and analyzed with CellProfiler to quantify rosette number or RNA collected for qRT-PCR. For cell cycle testing, cells were serum starved overnight in DMEM/F12 + 0.25% BSA, after which 10nM hC5a or vehicle control was added to the cells. The cells were then incubated overnight after which they were fixed and stained with anti-pHH3 antibody and DAPI using the above immunocytochemistry methods protocol. The ratio of pHH3 positive nuclei was calculated using analysis with CellProfiler.

In utero injections

Time-mated dams at E13.5 were anaesthetized under 1% isofluorane for surgery. 1uL of 100nM mC5a, 10μM PMX53 or respective vehicle control was injected into the ventricular system of the embryos. Abdominal incisions were closed with sutures and dams were administered 0.1mg/kg buprenorphine for analgesia post-surgery. Dams were sacrificed and tissues collected at 24-hours post-surgery for tissue analysis.

For analysis of proliferation the embryonic telencephalon was sectioned coronally and sections at the level of the preoptic area were used for histological analysis. M-phase cells, as determined by phosphohistone H3 staining, were counted using ImageJ at the apical surface of the telencephalic ventricular zone. Phosphohistone H3 positive cells per 100μm was calculated for each individual embryo and differences between treatment groups analyzed by students T-test.

Treatment of animals for behavioral experiments and MRI

Time-mated dams were acquired from UQBR and housed under standard conditions under the care of animal house staff. Mice were administered 1mg/kg PMX53 or sterile water vehicle control (n=6 per group) in a 100μL volume via intraperitoneal injection over three days (E12.5 - E14.5). Dams were allowed to litter down in individual cages. Gestational age at birth was defined as the number of days after discovery of the vaginal plug (E0.5). Litter number, weight, crown-rump length and snout-occiput length were taken at birth. In addition, pup weight was tracked over the first five weeks of life to determine if any differences existed in growth parameters.

At eight weeks of age male and female mice from the litters were randomly selected for participation in behavioral experiments (n = 8 per group). After behavioral experiments mice were anaesthetized with zylazine/xoletil cocktail and perfused with PBS followed by 4% PFA via an intracardiac cannula. Whole heads were incubated in 4% PFA for a further 3 days before washes with PBS and careful removal of the brain. Brains were stored in fresh PBS until MRI analysis.

86 Grip strength

Mice were assessed for motor weakness using the grip strength test. Briefly, mice gripped a bar attached to a force transducer. The experimenter gently pulled backwards on the base of the tail until the mouse dislodged from the bar. The maximum force recorded over three trials was designated as the grip strength. Both forelimb and hindlimb grip strength was assessed.

Balance Beam

Mice were assessed for higher motor coordination using the balance beam test. The apparatus consisted of a 70cm (length) x 3mm (width) beam suspended 1m above a surface. The beam was held in a room with bright overhead lights kept at a constant output of 150 lumens, a covered platform was set at the end of the beam. Mice were trained, through four training attempts, to move towards the covered platform through the use of a training beam of 80mm width. After training, mice were exposed to the test apparatus. Time taken to cross beam and foot fall errors were recorded. A footfall error was deemed to have occurred if the paw of the animal moved from a position on the beam and crossed a threshold 10mm beneath the beam.

Open Field Test

The open field test utilized 50 x 50cm infrared photobeam tracking arenas (Med associates, USA) to measure activity in a novel environment. Mice were placed in the center of the arena and, after a 30s initiation period, movement in the x, y and z planes was tracked for the following 30 minutes. Arenas were cleaned with 70% ethanol and allowed to dry between experiments. Thigmotaxis over the initially 5 minutes was used as a measure of anxiety in the new environment and was assessed as beam breaks within the center (25 x 25cm) square of the arena.

Y-maze

The Y-maze consisted of a Y shaped maze of opaque white plastic with three identical arms set at 120° angles. The arms were consisted of a home arm, of plain design and two exploratory arms where the walls were decorated with different repetitive geometric patterns. For the exploratory task, one exploratory arm was blocked from the maze by use of a plastic divider. A subject was placed in the home arm and allowed to explore the home arm and remaining exploratory arm for 5 minutes. The subject was then re-introduced to the maze after a 30-minute period with the arm divider removed, allowing for entry into the second, novel, exploratory arm. The movement of the mouse around the maze was tracked with EthoVision video tracking software (Noldus, The Netherlands). Frequency of entry into the novel arm was used as a measure of short term memory.

87 MRI analysis of brain regions

Brains stored for MRI analysis were washed extensively in PBS, followed by 48h incubation in gadolinium contrast agent (0.2% Magnevist, Bayer Healthcare Pharmaceuticals, in PBS). Brains were imaged on 16.4T small animal vertical wide bore NMR spectrometer (Bruker BioSpin) at the Centre for Advanced Imaging, University of Queensland. Brains were immersed in fomblin oil (Solvay Solexis, Italy) inside a glass test tube of 10mm diameter and fitted inside a quadrature birdcage coil (M2M imaging Inc., USA). T1 weighted images and multi-shell diffusion weighted images (DWI) were obtained within a total scan time of 18 hours as previously described (Sepehrband et al. 2015). Briefly, DWI datasets were composed of three B0 images and sixty diffusion weighted images for each shell. Optimally ordered gradient directions with electrostatic energy minimization were obtained using the Camino software package (Jones, Horsfield, and Simmons 1999; Cook et al. 2007).

Volumetric analysis of the obtained T1 images was achieved using Advanced Normalisation Tools (ANTs) software. Briefly, all T1 images were warped to produce a common template image. Warp fields containing Jacobian values for the individual images were subjected to a modified T-test using the randomize function of FSL (Oxford center for functional MRI of the brain software library, Oxford, UK) in order to determine significantly different Jacobian value voxels between the vehicle and PMX53 treated groups. Inverse warp fields were applied to anatomical area mapping of the common template to generate volumetric values for regions of sample brains. T1 images and generated anatomical masks were visualized and refined in ITKsnap software (University of Pennsylvania, USA). Differences in brain regions volume were tested for using Student's T-test.

Images were registered using the FSL linear registration tool in order to compare anatomically similar voxels between samples. Comparison of each of the diffusion parameters was achieved using the randomize function of FSL to generate a probability map of differences between vehicle- and PMX53-treated samples. Probability maps were thresholded to significance (p ≤ 0.05) and displayed on a generated template image.

Statistical Analyses

Graphing and statistics were performed using GraphPad Prism Software 6.0c (GraphPad Software, USA) using Student's t test and one-way ANOVA with Dunnett post-test for the relevant statistical analysis.

88 Results

C5aR1 is expressed in murine neural progenitor cells and is localized to the apical ventricular zone.

We have previously reported the neuroepithelial expression of C5aR1 during mouse neurulation (7.5- 10.5 dpc) (Denny et al. 2013), but it is unknown if C5aR1 expression continues during the period of neurogenesis. We therefore examined the temporal expression of C5aR1 in embryos 12.5-18.5dpc. RT-PCR analysis of whole brain RNA extracts revealed C5ar1 expression during this key period of brain formation (Fig. 3.1A). Immunohistochemistry analysis indicated that C5aR1 protein was distinctly localized to the apical surface of the ventricular zone (Fig. 3.1A). The ligand of C5aR1, mC5a, was detected at very low levels in embryonic and adult brain tissue, however, it was found at much higher levels in cerebrospinal fluid (CSF) sampled from E14.5 embryonic ventricles, but not adult mouse CSF (Fig. 3.1D). Human concordance with these results has recently been reported, with hC5a detected in the CSF of newborn infants (Pataky et al. 2016). Importantly, these embryonic mC5a CSF concentrations equated to approximately 1.4nM, a functionally active concentration for this potent signaling peptide (Hawksworth et al. 2014).

We next demonstrated that C5aR1 expression is maintained ex vivo in neurospheres derived from the telencephalon of E14.5 mice, and the immortalized neural progenitor cell line NE-4C, as determined by RT-PCR analysis (Fig. 3.1A) and immunocytochemistry (Fig. 3.1B&C). Interestingly, differentiation of the NE-4C line with retinoic acid, confirmed by downregulation of Sox2, caused a statistically significant reduction in C5aR1 mRNA between stage II and IV (Fig. 3.1F), a period that corresponds to the beginning of neurogenesis and migration in the cultures (Schlett and Madarasz 1997). No reduction of C5aR1 protein was detected until stage VI, a period that marks the onset of gliogenesis (Fig. 3.1E). The discordance in timing between mRNA and protein signal loss reflects previous measurements of protein half-life in culture (Schwanhausser et al. 2011). Overall, this indicates that C5aR1 retains a polarized localization in neural progenitor cells ex vivo, and expression of the receptor reduces as cells differentiate.

89 Figure 3.1: Localization of C5aR1 and ligands. A) C5aR1 (red) is expressed in the developing neocortex at the apical surface of the ventricular zone from at E14.5 (top row). Counterstain with Pax6 (green), DAPI (blue). Scale bar = 50µm. Merged images of the ventricular zone at E12.5, E16.5 and E18.5 are shown in the second row. RT-PCR demonstrates C5aR1 expression in embryonic brain tissue, neurosphere and NE- 4C culture. B) C5aR expression (red) within sectioned neurosphere. Secondary-only negative controlled labelled ‘Negative’. Scale bar = 50µm. C) C5aR expression (red) on NE4C cells grown in monolayer. Secondary-only negative controlled labelled ‘Negative’. Scale bar = 20µm. D) Embryonic CSF contains C5a at significantly greater concentrations than brain tissue or maternal CSF. E) C5aR1 is detected within NE-4C cultures by western blot at the predicted molecular weight (50kDa), and decreases at stage VI of differentiation. Stages indicate morphologically distinct progression of NE-4C differentiation (See Methods). F) Expression of C5aR1 mRNA decreases with differentiation of NE-4C cells. Progenitor marker Sox2 is assayed as comparison.

90 C5aR1 is apically localized in human embryonic stem cell-derived neural progenitors.

To explore the role of C5aR1 in a human setting, we first assessed whether the mouse apical neural localization of C5aR1 was conserved in human tissue. We have previously reported C5aR1 expression in a similar localization to mouse, with staining for C5aR1 restricted to the cortical ventricular zone of Carnegie stage 13 human neural tissue (Denny et al. 2013). To further assess C5aR1 localization and function in human development, we utilized hES-derived neuronal progenitors as an in vitro model system. To this end, hES cells were differentiated into cortical neural rosettes, a stage with characteristics analogous to the cortical ventricular zone (Shi et al. 2012; Ziv et al. 2015). The cells in these human neural rosettes expressed the neural markers TUBB3 and NCAD, with strong expression of the tight junction marker ZO-1 on the apical luminal surface of each rosette, indicative of the distinct apicobasal polarity that defines the rosette architecture (Fig. 3.2A). C5aR1 expression was robustly detected at the apical surface of rosettes, where it co-localized strongly with the apical membrane marker atypical protein kinase C zeta (PKCζ), but not with markers of cell-cell junctions (NCAD) or cilia (Arl13b), suggesting that the protein is confined to the apical plasma membrane (Fig. 3.2A). In neural progenitor cells, the apical membrane attachment acts as an anchor for determinants of polarity such as the Par3/Par6/PKCζ complex, which together with apical NCAD- based adherens junctions maintains tissue architecture and apicobasal polarity (Gotz and Huttner 2005). Interestingly, we observed a close correlation between NCAD and C5aR1 expression levels during the neural differentiation of hES cells. Upregulation of NCAD after neural induction peaked at the rosette stage and decreased upon further maturation of the cultures. Both C5aR1 and C5 closely followed this pattern of expression (Fig. 3.2B). C5 protein expression appeared diffuse and punctate throughout the rosettes (Fig. 3.2A), and the processed form of C5, hC5a, was detectable in the lysate of rosette cells at a similar time-point (Fig. 3.2C). High lysate levels of C5a may reflect intracellular stores of C5a, as has been observed and discussed previously for the complement anaphylatoxins (Pavlovski et al. 2012; Hawksworth et al. 2014; Elvington et al. 2017). These results indicate that human subcellular and temporal C5aR1 expression during development closely mirrors that observed in developing mouse brain.

91 Figure 3.2: Expression of C5aR1 in human embryonic stem cell-derived rosettes. A) Immunocytochemistry of human neural rosettes showing staining for neural marker TUBB3, tight junction marker ZO-1, and complement factor 5 (C5). C5aR1 localizes to the apical membrane, colocalizing with PKCζ, but not markers of cilia (Arl13b) or tight junctions (NCAD). Negative controls shown top right. Scale bar = 20µm. B) Transcript expression as human embryonic stem (hES) cells (day 0) are differentiated through the cortical rosette stage (day 28) to a mature neuronal lineage. C5AR1 expression is highest at the rosette stage of neuronal differentiation. C) C5a is detected through ELISA within the lysate of rosette cultures, and is not derived from the exogenous extracellular matrix (Matrigel). 92 C5aR1 signals via PKCζ and Erk in mouse and human neural progenitors to promote polarization and proliferation.

Intrigued by the unique apical localization of C5aR1 in vivo and in vitro, and the well described importance of the apical membrane and PKCζ in controlling progenitor pool proliferation, we next assessed the functional role of C5aR1 in these processes. In mouse neurosphere cultures, mC5a addition caused an increase in p42/44 (ERK) phosphorylation (Fig. 3.3A), which could be effectively inhibited through pretreatment with a specific PKCζ pseudosubstrate inhibitor (Fig. 3.3B). Similarly, in human rosette cultures, treatment with human C5a caused an increase in p42/44 phosphorylation that was attenuated through pretreatment with either a selective C5aR1 antagonist (C5aR1-A, PMX53), or with PKCζ inhibition (Fig. 3.3C), indicating that C5aR1 signaling is conserved between human and mouse. Given the association between ERK signaling and mitogenic activity, we investigated the ability of C5aR1 signaling to modulate neural progenitor proliferation. Daily addition of species-specific C5a to neurosphere cultures resulted in an increase in both number and diameter of mouse and human neurospheres over a 7-day period (Fig 3D/E & F/G respectively). Additionally, in human neural rosette cultures, addition of C5a led to a 59% increase in phosphorylated histone H3 (pHH3) positive nuclei, indicative of increased mitotic activity within rosettes (Fig. 3.3H).

The observation that C5aR1 signaling is mediated by PKCζ, a component of the Par3/Par6/PKCζ cell polarity complex, combined with its localization at the apical membrane of neural rosettes, strongly supports a role for C5aR1 in controlling neural progenitor cell (NPC) polarity. We therefore examined a role of C5aR1 in NPC polarity signaling pathways. Previous studies have shown that a loss of paracrine Notch signaling results in downregulation of NCAD and the loss of apicobasal polarity (Main et al. 2013). Treatment of human neural rosettes with the Notch signaling inhibitor DAPT significantly decreased the expression of NCAD, leading to a disruption of cell-cell contacts and induced a loss of rosette architecture (Fig. 3.3I). Interestingly both C5aR1 and C5 expression also decreased with DAPT treatment, which may indicate polarity-dependent expression of these complement factors (Fig. 3.3I). Single cell dissociation of rosettes also interferes with paracrine signaling and cell-cell contact, resulting in loss of cell polarity and impaired rosette formation. Exogenous addition of hC5a maintained rosette architecture in the presence of DAPT (Fig. 3.3J), and promoted re-establishment of rosette architecture after dissociation, an effect that was blocked following C5aR1 antagonism (Fig. 3.3K). We conclude that C5aR1 is not only dependent on, but also actively promotes, cell polarity.

This promotion of polarity was also observed in mouse-derived NE-4C cells cultured on transwell plates. Addition of exogenous mC5a led to restriction of the apical surface area by ~50%, as measured by ZO-1 staining, and microtubule organizing center (MTOC) localization in these cells was 93 significantly closer to the apical center, indicative of the induction of cell polarization (Fig. 3.3L&M). Collectively, these data confirmed the polarity-dependent expression of C5aR1, an involvement of C5aR1 signaling in the maintenance of neural progenitor polarity, and subsequently, proliferation.

Figure 3.3: C5aR1 signals through PKCζ to maintain cell polarity in vitro. A) Mouse neurosphere cultures demonstrate C5a-concentration dependent p42/44 phosphorylation B) The response to 100nM C5a is prevented by PKCζ inhibition. C) Human rosette cultures demonstrate time-dependent p42/44 phosphorylation to 10nM hC5a. The response is prevented through pretreatment with C5aR1-A or PKCζ inhibition. D-G) Mouse and human neurosphere cultures dissociated and grown over a 7-day period demonstrate an increase in number (D & F respectively) and diameter (E & G respectively) in response to C5a. H-K) Treatment of human rosettes with 10nM C5a. H) C5a increases M-phase positive cells in neural rosettes as determined by pHH3 immunocytochemical analysis. I) DAPT (grey bars) treatment induced loss of rosettes and decrease in mRNA of NCAD, C5AR1, and C5 compared to vehicle (black bars) treatment. Maintenance of rosette architecture following single cell dissociation (K) or DAPT treatment (J) was promoted by exogenous C5a addition. Adjacent images are representative of DAPT treated rosettes in the presence or absence of C5a. NCAD (white), and computational outlines (green) of rosette apical lumens are shown. L&M) NE-4C cells grown on transwell membranes demonstrate reorganisation of the mitotic spindle (L), as determined by acetylated tubulin staining (green), and reduction in apical surface area (M), outlined by ZO-1 (red) in response to C5a. White arrows are representative distances from mitotic spindle to calculated cell centre as shown in (L). Scale bar = 20µm.

94 C5aR1 signaling increases the proliferation of neural progenitor cells of the embryonic ventricular zone in vivo

Having defined a role for C5aR1 in NPC proliferation and establishment of cell polarity in vitro, we next wished to assess its role in mouse brain development by in utero delivery of mC5a or C5aR1-A (PMX53) into the embryonic ventricle of embryonic day (E)13.5 mouse embryos (Fig. 3.4A). We observed that twenty-four hours after a single injection with mC5a there was a 2-fold increase in the number of apical progenitors in M-phase of the cell cycle, as indicated by pHH3 staining (Fig. 3.4B). In contrast, blockade of C5aR1 signaling resulted in a decrease in the number of M-phase apical progenitors after 24 hours (Fig. 3.4B). Analysis of the cleavage plane of actively dividing cells in these samples demonstrated a significant shift from symmetric to asymmetric division following C5aR1-A injection (Fig. 3.4C). We conclude that C5aR1 signaling promotes NPC proliferation in vivo and affects the balance between symmetric and asymmetric division, in concordance with in vitro observations. Combined with the robust expression of mC5a in embryonic CSF (Fig. 3.1D), this supports an endogenous physiological role for mC5a-C5aR1 signaling during embryonic neurogenesis.

95 Figure 3.4: C5aR1 signaling alters neural progenitor division planes and proliferation in vivo. A) Schema of the in utero injection process. Briefly, 1µL 100nM mC5a, 1µM PMX53 or vehicle was delivered to the embryonic ventricle in utero. After 24 hours, brains were processed for immunohistochemistry. M-phase cells, as determined by pHH3 staining, were counted along the ventricular surface of the neocortex. B) In utero injection of mC5a to the embryonic ventricle increases, whilst blockade of C5aR1 signaling using PMX53 decreases, the number of M-phase apical progenitor cells. C) Cleavage plan analysis demonstrates a shift from symmetric division towards asymmetric division upon treatment with C5aR1 antagonist. S, Symmetric division; A, Asymmetric division; O, Oblique division.

96 Blockade of C5aR1 from E12.5-14.5 results in behavioral abnormalities in the adult mouse

Given that acute disruption of C5a-C5aR1 signaling affects proliferation of apical progenitors and the balance between symmetric and asymmetric cell division, we next determined whether acute pharmacological blockade of C5aR1 during neurogenesis translates into behavioral abnormalities later in life. Time-mated dams were intraperitoneally injected daily with 1mg/kg C5aR1-A during the critical neurodevelopmental window (E12.5-14.5), and resultant litters were subjected to behavioral testing between 6-8 weeks of age (Fig. 3.5A). We first confirmed that intraperitoneal delivery of C5aR1-A over the three-day embryonic window resulted in impaired neurogenesis. Compared to vehicle controls C5aR1-A-treated embryos displayed a reduction in the size of the ventricular zone, as measured by Sox2 staining, and an increase in the thickness of the maturing cortex, as demonstrated by the post-mitotic maturing neuron marker doublecortin (DCX) at E16.5. This collectively resulted in a significant decrease of the Sox2/DCX ratio (Fig. 3.5B). We next assessed whether C5aR1-A treatment resulted in any gross developmental or pregnancy complications. C5aR1-A treated pups showed no change in postnatal growth (Fig. 3.5C), litter size (Fig. 3.5D) and snout-occiput length (Fig. 3.5F), however a minor, but significant, reduction in crown-rump length was observed (Fig. 3.5E).

Adult mice were next subjected to a series of behavioral tests to assess neuromotor and cognitive function. In utero C5aR1-A treated mice demonstrated significant behavioral abnormalities in adulthood. In motor control tasks, there was no difference in grip-strength (Fig. 3.5G), however balance beam testing of centrally-controlled motor coordination tasks showed an increase in both footfall errors and time taken to cross the beam for C5aR1-A treated mice (Fig. 3.5H, I). In an open field test, C5aR1-A treated animals of both genders demonstrated a decrease in distance travelled in the center areas of the cage (Fig. 3.5J), suggesting heightened anxiety in a novel environment. The Y-maze was used to assess short-term memory, and frequency of entry into the novel arm was reduced in C5aR1-A treated animals (Fig. 3.5K). Finally, the forced swim test was used to assess depressive- like symptoms, where C5aR1-A treated animals spent significantly reduced time being immobile compared to non-treated animals (Fig. 3.5L). These results clearly demonstrated that acute in utero blockade of C5aR1 signaling over a relatively short time frame led to a range of behavioral discrepancies that involved several anatomically distinct systems such as memory, coordination and anxiety.

97 Figure 3.5: Blockade of C5aR1 signaling at E12.5-14.5 causes behavioral changes in adult mice. A) Schema of the experimental process. Briefly, 1mg/kg/day of the C5aR1 antagonist, PMX53, was delivered by intraperitoneal injection to pregnant dams at E12.5-14.5. Resultant litters were taken through behavioral testing from 6-8 weeks, sacrificed and brains prepared for ex vivo MRI. Figures display results for vehicle (V, black bars) and PMX53 (P, grey bars) treated mice. B) Sox2/DCX ratio of the ventricular zone of E16.5 embryos. No change in postnatal growth (C), litter size (D), and snout-occiput length (F) was seen. A significant reduction in crown-rump length was observed (E). G) No difference between treatment groups was found in grip strength for both forelimb (F) and hindlimb (H). H) Time to cross balance beam was increased in male animals from PMX53-treated litters. I) Footfall errors crossing balance beam. Distance moved in center of open field arena (J), Frequency of entry to novel arm Y-maze (K), and Time spent immobile during forced swim test (L) were significantly different in PMX53-treated litters.

98 In utero blockade of C5aR1 between E12.5-14.5 results in microstructural differences on MRI analysis

Given the broad behavioral deficits induced by transient in utero C5aR1 antagonism between E12.5- 14.5 of gestation, we next utilized ex vivo 16.4T magnetic resonance imaging (MRI) to identify structural alterations in the brain that could underlie the observed phenotypes. Firstly, a Jacobian map was utilized to measure the relative change of each brain structure required to fit to a template image, therefore identifying any volumetric change in distinct regions between sample groups (Leporé et al. 2007). C5aR1-A treated animals showed significantly increased clusters of Jacobian values throughout the cortex and striatum (Fig. 3.6) indicating that spatial expansion was required to fit individual images to the template in these areas (Lepore et al. 2008). However, volumetric analysis of segmented brain regions (Ma et al. 2005) failed to show significant differences between groups (Table 2). These areas of volume difference correlated with microstructural difference as shown by fractional anisotropy (FA). FA values were higher in the frontal cortex, striatum, and hypothalamus of C5aR1-A treated animals (Fig. 3.6) alluding to increased myelination, increased axonal density or a reduction in fiber dispersion in these areas (Sepehrband et al. 2015), which may account for the behavioral differences seen between these two experimental groups (Soares et al. 2013). Overall, these results demonstrate multiple microstructural differences induced by C5aR1 inhibition in embryos, which are concordant with the behavioral deficits seen in these mice.

Table 2: Table of MRI volume comparison of brain regions for C5aR1-antagonist or vehicle treated mice.

Vehicle treatment C5aR1-A treatment Area Volume (mm3) Std Error n Volume (mm3) Std Error n p value Amygdala 10.24 0.1425 7 10.18 0.2929 9 0.8764 Caudate/Putamen 23.25 0.4326 7 22.85 0.5933 9 0.6175 CC and External Capsule 8.213 0.102 7 7.891 0.331 9 0.4203 Central Grey Matter 4.476 0.05 7 4.339 0.07 9 0.1762 Cerebellum 46.96 0.3563 7 42.83 1.764 9 0.0624 Fimbria 2.007 0.028 7 1.928 0.05576 9 0.2702 Globus Pallidus 2.485 0.055 7 2.368 0.046 9 0.1209 Hippocampus 24.71 0.287 7 24.31 0.5846 9 0.5832 Hypothalamus 11.61 0.162 7 11.17 0.284 9 0.234 Neocortex 125.5 1.84 7 121.5 3.45 9 0.3668 Olfactory Bulbs 17.88 0.2216 6 16.53 0.7673 9 0.1858 Thalamus 25.19 0.095 7 24.69 0.732 8 0.5444

99 Figure 3.6: Blockade of C5aR1 signaling at E12.5-14.5 results in microstructural changes in adult brains. Top row; significance map of jacobian warping projected onto T1 weighted template average. Middle row; significance map of fractional anisotropy (FA) values projected onto template average. For both maps, vehicle>PMX53 (C5aR1-A) treatment (blue/purple) and PMX53>vehicle (red/yellow). Color coded p-values shown at bottom of figure. Bottom row; Anatomical areas labelled; Mot, motor cortex; Orb, orbital cortex; OB, olfactory bulb; SS, somatosensory cortex; Gust, gustatory cortex; P, piriformis; CP, caudate/putamen; NA, nucleus accumbens; Pal, pallidum; H, hypothalamus.

100 Discussion

Proteins of the complement system are present during embryogenesis, playing novel roles in development (McLin et al. 2008; Denny et al. 2013; Jeanes et al. 2015). Our laboratory has previously demonstrated their presence and function on human embryonic stem cells and mouse neuroepithelial cells (Denny et al. 2013; Hawksworth et al. 2014). Additionally, we have previously shown C5aR1 expression on the apical neuroepithelium at a similar developmental stage to this study, in non- pathological human embryos (Denny et al. 2013), raising the question of roles for complement in normal embryonic development. Here we show that in both human and mouse models, the key complement effector system, C5a-C5aR1 signaling, functions to control progenitor cell polarity, proliferation and the symmetry of the cell division. Ultimately, this loss of C5aR1 signaling manifests as altered cerebral organization and behavioral deficits.

In neural progenitor cells of the ventricular zone, the loss of apical attachment where C5aR1 resides is associated with decreased expression of factors responsible for the maintenance of stemness. Asymmetric inheritance of this attachment during mitosis is a catalyst for differentiation toward a post-mitotic state, with loss of attachment initiating exit from the ventricular zone pool, and subsequent maturation into neuronal subtypes (Gotz and Huttner 2005; Miyamoto, Sakane, and Hashimoto 2015). Conversely, symmetric division of the apical membrane maintains both daughter cells within the ventricular zone progenitor pool, secondary to continued signaling from the apical membrane. The apically-localized PKCζ is an essential second messenger in the promotion of symmetric division and the maintenance of neuroepithelial architecture (Ghosh et al. 2008). However, less is known about the receptors that trigger PKCζ activation. Here we have identified C5aR1 as a novel prime candidate, with polarized apical expression, for controlling endogenous PKCζ signaling during mammalian corticogenesis.

In addition, we have shown a plausible biological source for C5aR1 stimulation within the CSF of the developing embryo, which were at higher concentrations than both embryonic brain tissue and adult CSF. This may suggest that C5a is actively secreted into the CSF to stimulate proliferation of progenitor cells, given that concentrations are higher during development than in adulthood. The source of this C5a will require further delineation, however we demonstrated C5 expression within neural rosette cultures (Fig 2A). As the CSF was assayed before the advent of ependymal cell differentiation, this strongly suggests an autocrine production of C5a by neural progenitor cells.

These findings are particularly of interest in light of previous reports demonstrating that, in adult mice, C5aR1 does not contribute to basal neurogenesis (Bogestal et al. 2007). This appears to contrast with our study, which identifies a role for C5aR1 in neurogenesis, albeit at an earlier stage of life than

101 investigated by Bogestål and colleagues (2007). However, the receptor has also been demonstrated on migrating neuroblasts in models of cerebral ischemia (Rahpeymai et al. 2006), leading to some question of its role on these cells, given an apparent non-contributory role to neurogenesis. Whilst not directly tested, it could be argued that C5aR1 is responsive on neuroblasts to the higher C5a concentrations in the ischemic brain, but has a dormant role in the non-pathological, and therefore low-C5a, setting.

The present discovery adds to previous studies which have identified neurodevelopmental deficits associated with aberrant complement activity, including in disorders such as autism, schizophrenia, and epilepsy (Hawksworth, Coulthard, and Woodruff 2016). For example, the fetal neurocognitive injury associated with maternal malaria infection has been shown to be mediated by C5aR1 (McDonald et al. 2015). Furthermore, allele variations leading to increased complement factor 4A () expression have been correlated to increased schizophrenia risk (Sekar et al. 2016). It is interesting to speculate, given our findings, on whether the behavioral deficits demonstrated in both diseases are the result of a direct effect of C5aR1 signaling on neural progenitors, altering corticogenesis, rather than the alternate hypothesis of a generalized inflammation and altered synaptic pruning. Within this hypothesis, classical complement cascade activation would inescapably lead to the formation of C5 convertases, and activation of C5. Given our identification of a mechanistic role for C5aR1 in ventricular zone progenitors and cerebral organization, it could equally be hypothesized that the increased C4A and classical complement cascade activation increases cerebral C5aR1 signaling, with consequent alterations in progenitor migration driving the complex cortical pathology associated with schizophrenia risk. Additionally, it is interesting that the short window of C5aR1 blockade used in our studies was also not compensated for later in development, as demonstrated by the behavioral and brain microstructural differences in adult mice. In contrast, there is a demonstrated functional compensation of impaired synaptic pruning resulting from other models of complement deficiency (Perez-Alcazar et al. 2014). This theory is supported by the finding of impaired short term memory in C5aR1 knockout animals (Gong et al. 2013), indicated that disruption of the receptor signaling, but not the cascade, is enough to alter neuronal circuitry.

Given the potential disparity between animal and human cognitive development, one focus of this study was to validate observations made in the mouse model in a human environment. We have previously shown expression of C5aR1 in human embryos, at Carnegie stage 13, where it is also localized to the apical neuroepithelium (Denny et al. 2013). The combination of this in vivo localization with the results presented in this study, demonstrating human neural progenitors signaling through C5aR1 in a similar manner to the mouse, strongly suggests conservation of C5aR1 function between mouse and human. C5aR1 is already a strong candidate target for direct therapeutics

102 against inflammatory diseases of pregnancy. Maternal complement dysregulation is a factor in the pathogenesis of preeclampsia and infection-related preterm birth (Lokki et al. 2014; Denny et al. 2015). Interestingly, the humanized IgG2/4 monoclonal antibody directed against C5, eculizimab, has already been in use in pregnant women affected by paroxysmal nocturnal haemoglobinuria (PNH). Given the rarity of the disease there have only been a few reports on the safety of this drug in pregnancy, with no obvious complications at birth nor in early childhood development (Kelly et al. 2015). The effect of eculizimab is fortuitously confined to the maternal circulation by the poor transfer of IgG2 through the placenta, and comparison of maternal and cord blood from these pregnancies has shown no effect on the complement system of the fetus (Hallstensen et al. 2015). However, with the clinical development of small molecule C5aR1 inhibitors, such as CCX-168 (Woodruff, Nandakumar, and Tedesco 2011), it would be prudent to be cautious in the clinical use of C5aR1 directed therapeutics during pregnancy without prior consideration to fetal transfer and potential developmental implications of C5aR1 inhibition as highlighted in this study.

This study also adds to emerging work demonstrating a wide developmental role for complement components in mammalian development. These include roles for complement factors in developmental processes such as radial intercalation, migration and synaptic pruning (Stevens et al. 2007; Carmona-Fontaine et al. 2011; Szabo et al. 2016; Gorelik A et al. 2017). In this context, it is interesting to speculate what niche these proteins first filled. The origins of the evolutionarily ancient system of complement proteins may be as a controller of tissue organization and development, with utilization of complement in the context of innate immunity following later in evolution (Hawksworth, Coulthard, and Woodruff 2016).

In conclusion, here we show a novel role for C5aR1 as a modulator of apicobasal polarity in neural progenitor cells that is highly conserved between mice and humans. Inhibition of C5aR1 signaling during neurogenesis has deleterious consequences for cerebral organization, resulting in behavioral abnormalities in adult mice. Our data suggest that the development and use of C5aR1 antagonists as potential treatments for pregnancy-related inflammatory disease should be approached with extreme caution.

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108 4. C5aR1 in Pluripotent Stem Cell derived Neurons

The complement system is now firmly established as a multipotent regulator of biological processes. This chapter is focussed on exploring an emerging facet of complement function, complement regulation of cellular metabolism and its interplay with cell survival.

Metabolism and Cell Survival

The regulation of metabolic flux controls not only production of ATP in response to energy requirements, but the balance between cell death and survival. Here some of more pertinent mechanistic links between cell metabolism and survival, which may underpin any observed function of C5a signalling, are introduced.

There is an intuitive link between metabolic rate and cell survival, with glycolytic rate influencing survival via repression of apoptotic signalling. Reduced glycolysis leads to loss of mitochondrial membrane potential, swelling, release of pro-death factors such as cytochrome c, and increased ROS production (Kuznetsov et al. 2004). This process can be mediated by canonical bcl-2 family signalling, with loss of phosphorylation of bcl-2-associated death promotor (bad) resulting in bax and bak mediated initiation of apoptosis. Interestingly, the bcl-2 family of proteins have now been identified as regulators of energy metabolism independent of their apoptotic functions. In hepatocytes and beta islet cells, bad activates glucokinase to increase glycolysis, whilst bcl-2 and mcl-1 proteins have been shown to increase mitochondrial respiration and energy production (Giménez-Cassina and Danial 2015). C5a is known to modulate the activity of bcl-2 family proteins, however, to date this has only been explored in terms of canonical bcl-2 signalling, with an influence on cell metabolism largely unexplored (Perianayagam et al. 2004; Perianayagam et al. 2006; Lalli et al. 2008).

With regards to neuronal energy metabolism, a number of studies have outlined a unique link between energy flux and cell survival. It has been reported that in the rat cortex, neurons express 6- phosphofructo-2-kinase/fructose-2, 6-bisphosphatase-3 (pfkfb3), a key glycolytic enzyme; however, this enzyme is subjected to rapid proteosomal degradation, leading to an absence of pfkfb3 protein (Herrero-Mendez et al. 2009). As would be expected, this lack of pfkfb3 leads to a low glycolytic rate and an inability of the neurons to increase glycolysis in response to inhibition of mitochondrial respiration (Almeida et al. 2001). Rather than being detrimental, this has been reported to be an advantageous adaptation for neurons, with the low neuronal glycolytic rate diverting glucose into the pentose phosphate pathway, increasing the production of reduced glutathione, a major antioxidant

109 required for ROS homeostasis. As such, when the levels of pfk3b were artificially increased, the decrease in antioxidant production resulted in increased ROS and apoptosis of the neurons. In such a model, the prioritisation of antioxidant production over pyruvate formation would lead to a requirement for a separate source of energy. Within the brain this need is hypothesised be met by astrocyte production of lactate, which is then taken up by neurons and converted to pyruvate for use in the TCA cycle and oxidative phosphorylation, in a processes termed the astrocyte-neuron lactate shuttle (ANLS) hypothesis.

Whilst there is a growing body of evidence in support of the ANLS hypothesis, there remains considerable dispute in this area of study, with reports of experimental results contradictory to those expected in an ANLS model (best reviewed in (Dienel 2012; Pellerin and Magistretti 2012)). In conflict with the above results, it has been reported that similar rat neurons are capable of upregulating glycolysis to meet energy requirements, negating the low pfkfb3 hypothesis and need for an ANLS (Dienel 2012; Patel et al. 2014). Such disagreements within the literature highlight that in the study of a role of C5a in control of neuronal metabolism, the identification of the metabolic capacity of human neurons may provide serendipitous insights into the validity of the ANLS hypothesis in the human brain.

Complement in metabolic regulation

Recent work has demonstrated an intrinsic link between complement activation and metabolic flux in immune cells (recently reviewed by Hess et. al. (Hess and Kemper 2016)). For example, in T-cells, C3b-C46 signalling has been shown to enhance glycolysis and mitochondrial respiration, whilst intracellular C3a-C3aR signalling results in the activation of mechanistic target of rapamycin (mTOR), a central regulator of T-cell metabolism capable of increasing aerobic glycolysis (Kolev et al. ; Liszewski et al. ; Yang and Chi 2012). C5aR signalling has also been linked with mTOR signalling in T-cells through AKT phosphorylation (Strainic et al. 2013). Interestingly, AKT signalling itself can induce glycolysis and inhibit apoptosis through an increase in mitochondrial associated hexokinase (Gottlob et al. 2001). Given the long history of C5a signalling in promoting survival, such a mechanism provides a link through which previous observations of pro-survival C5a signalling may be acting via metabolic regulation, rather than direct inhibition of apoptotic cascades.

Whilst systemic actions of complement on metabolism have been reported (Phieler et al. 2013), the involvement of complement signalling in cellular metabolism of non-immune types such as neurons remains poorly defined. One report stated that C5a signalling in pheochromocytoma derived neuron- like cells retards cell growth through reduced aerobic glycolysis; however, on review of the results

110 of this study, further investigation would be necessary before a comprehensive conclusion could be made (Martinus and Cook 2011).

C5a signalling in post-mitotic neurons

As outlined in chapter 1, within the central nervous system C5a signalling has been shown to be an important regulator of survival. Given the strong connection between metabolic pathways and cell survival, and the recent works linking complement to cell metabolism, it could be postulated that the mechanism behind the previously defined actions of C5a in neuronal survival lies in the regulation of neuronal metabolism by complement.

In post-mitotic neurons, animal studies have reported both neuroprotective and neurodestructive actions of C5a signalling. In the setting of glutamate excitotoxicity, activation of C5aR in mouse cortico-hippocampal neuronal cultures promotes cell survival through maintenance of glutamate GluR2 receptor expression and inhibition of apoptosis (Osaka et al. 1999; Mukherjee et al. 2008). Conversely, it has been reported that addition of C5a to mouse cortical neurons of a similar age directly induces neuronal apoptosis (Pavlovski et al. 2012). Additionally, in this study it was reported that apoptosis induced via glucose deprivation was mediated through autocrine C5a signalling, with survival promoted by antagonism of C5aR. Whilst the results between the studies are in conflict, this may be in part explained by variations in methodology used for neuron isolation, with the action of C5aR in more specific neuronal subsets varying between promotion of survival or apoptosis.

A main focus of this chapter was to explore the role of C5a signalling in human embryonic stem cell derived cortical neurons. More specifically, it was aimed to define the action of C5a in human neuronal survival, and explore a mechanistic link between C5a function and the regulation of cell metabolism. The elucidation of a role for C5aR1 in human neuronal survival and/or metabolism, would aid in the understanding of how this receptor acts in both normal physiology and in neuronal pathologies such as stroke or Alzheimer’s disease, helping to guide future therapeutic research.

111 Materials and Methods

Cell Culture

H9 hES cells were maintained on Matrigel (BD Biosciences, San Diego, CA) coated dishes in mouse embryonic fibroblast conditioned KSR medium (Dulbecco's modified Eagle's medium/F-12 supplemented with 20% knockout serum replacement, 0.1 mM nonessential amino acids, 1 mM l- glutamine, 0.1 mM β-mercaptoethanol, and 10 ng/ml human basic fibroblast growth factor [FGF2] - all sourced from Life Technologies, Carlsbad, CA) as previously described (Briggs et al. 2013). hES induction to cortical neurons was performed using an adaptation of the dual-SMAD inhibition method (Shi et al. 2012a). With this protocol, the induction efficiency is >95% with a population consisting of 70% TUBB3 positive neurons by day 40 of differentiation (Shi et al. 2012b).

The initial steps of this protocol involve rosette generation as described in chapter 3 of this thesis. Following rosette generation, purity of cultures was ensured by manual harvesting of rosettes. Cells were matured in the continued presence of retinoic acid, until day 60, after which they were used for further experimentation. Cytarabine (1µM, Sigma-Aldrich) was added to cultures with second-daily media changes from day 43-50. The concentration and timing of cytarabine addition were optimised and selected as the ideal time for induction of apoptosis of progenitor and contaminant cells, allowing for the production of a pure population of post-mitotic neurons.

Immunocytochemistry

Differentiated neuronal cultures were fixed and stained using the same methodology as described in chapter 3 of this thesis. Neurons were stained with antibodies raised against human C5aR1 (BD, # 550733, 3µg/mL), Tubb3 (Millipore, MAB1637, 1:1000), and GFAP (DAKO, PO449, 1:500) and subsequently with the appropriate alexafluor secondary antibodies (Invitrogen, 1:1000). Secondary only staining controls were used.

Calcium Flux Analysis

Day 28 neurons were seeded at a density of 3x104 cells per well into a black walled, clear bottom 96 well plate (Sigma-Aldrich, USA) and matured following the above protocol. On the day of experimentation, cells were incubated for 45min at 37°C in 100uL per well of Fluo-4 NW dye solution (Invitrogen, USA) consisting of 1x Fluo-4 dye in Hank’s balanced salt solution (HBSS) and 2.5mM probenecid. The FlexStation 3 microplate reader (Molecular Devices, USA) was used to perform the

112 calcium mobilisation assay. Changes in fluorescence indicative of intracellular calcium changes were measured every 2 seconds for 2.5min after the addition of a dose range from 100µM-1µM glutamate. FBS was used as a positive control.

Polymerase Chain Reaction

RT-PCR of post day 60 neuronal cultures was performed using the same methodology as described in chapter 3 of this thesis. The primer sequences for mRNA detection were, C5AR1 Fwd: CCTTCAATTATACCACCCCTGA Rev: GGAAGACGACTGCAAAGATGA; ACTB Fwd:GCGGGAAATCGTGCGTGACATT Rev: GATGGAGTTGAAGGTAGTTTGGTG.

Cell Survival

Neurons seeded at 3x104 cells per well in 96 well plates were used for cell survival studies. Cells were matured as described above and used post day 60 of differentiation. In order to accurately interrogate the function of C5a, cells were placed into a chemically defined medium with controlled levels of metabolic substrates. This base medium consisted of 145mM NaCl, 4mM KCl, 1mM MgCl2,

15mM HEPES, 2g/L Glucose, 2mM CaCl2, and 0.25% BSA (all Sigma-Aldrich). For FCCP and rotenone treatments, cells were incubated in a dose response of the respective chemicals. For C5a treatment, cells were pre-treated with 1nM C5a for 1 hour, after which vehicle, FCCP, or rotenone was added. Cells were analysed 24 hours later using a 1/10 dilution of Alamar Blue (Invitrogen) according to the manufacturers protocol. With this assay, the rate of colour change of the dye from blue to pink is directly proportional to the number of live cells. Following incubation, the supernatant absorbance was measured at 570nm, with 600nm as a reference wavelength.

Metabolic Analysis

Metabolic flux was analysed using the Seahorse bio-analyser (Seahorse Bioscience, USA) according to the manufacturer’s protocol. Briefly, a concentration range of both cells and chemicals were tested to identify the optimal concentrations of both. Cells were interrogated using the mito stress test protocol, with oxygen consumption rate (OCR) and extracellular acidification rate (ECAR) measured in response to the addition to the chemicals oligomycin, FCCP, and rotenone. An overview of the function of these chemicals is show in figure 3C.

113 Statistical Analysis

Graphing and statistics were performed using GraphPad Prism Software 6.0c (GraphPad Software, LaJolla, CA), using Student's t test and one-way ANOVA with Dunnett post-test for the relevant statistical analysis.

.

Results

Production of hESC derived cortical neurons

In order to investigate the role of C5aR1 signalling in human neurons, hES cells underwent neuronal induction using an adaption of the previously reported dual-SMAD inhibition protocol (Shi et al. 2012a). The produced cultures contained both neurons and glia, as confirmed with TUBB3 and GFAP staining respectively (Fig. 1A). It has previously been shown that PPSC derived cortical stem cells produce post-mitotic neurons prior to the formation of astrocytes (Shi et al. 2012b). This timing was taken advantage of to purify post-mitotic neurons from glial and contaminant cells. Temporal addition of the antimetabolite cytarabine induced apoptosis in proliferative cells, leaving a pure population of post-mitotic neurons for further study (Fig. 1A). Cortical specification was achieved through the presence of retinoic acid as previously described (Shi et al. 2012b). Consistent with previous reports, maturation of cortical neuronal cultures resulted in the acquisition of glutamate responsiveness as detected via calcium flux analysis (Fig. 1B&C).

114

Figure 1: hESC derived neuronal differentiation. (A) Human embryonic stem cells differentiated to neurons using dual SMAD inhibition results in cultures containing both TUBB3 positive (green) neurons and GFAP positive (red) glia. The addition of cytarabine from day 43-50 induced apoptosis of dividing progenitor and contaminant cells, leaving a pure population of post-mitotic neurons. (B) As detected via calcium flux analysis, the neurons showed no response to glutamate at day 44 of differentiation, with acquisition of glutamate invoked depolarisation achieved by day 60 of differentiation (C).

115 Exogenous C5a is not toxic to hESC derived neurons

C5aR1 expression has previously been reported on mouse cortical neurons and human neuronal subtypes (Hawksworth et al. 2016). Consistent with these reports, mRNA expression of C5AR1 was seen in hESC derived neurons (Fig. 2B). Protein expression in these neuronal cultures was below the limits of detection via immunocytochemistry with a C5aR1 specific antibody (clone C85-2506, see chapter 3). Whilst this limited the ability to assess the distribution of C5aR1 expression within the culture, this result is concordant with previous studies which showed functional C5aR1 signalling in mouse neurons where only mRNA expression was detectable (Hernandez et al. 2017). Given the previous reports of C5aR1 signalling modulating survival of mammalian cortical neurons, we next sought to assess the ability of C5a to induce neurotoxicity in human neurons. In contrast to previous reports in mouse neurons, the addition of 10nM C5a to neuronal cultures did not affect neuronal survival after 24 hours (Fig. 2A). This may reflect species specific effects of C5aR1 in previous rodent studies which do not translate to human cells.

Figure 2: C5a is not toxic to C5AR1 expressing neurons. (A) Exogenous C5a did not alter cell survival as detected by Alamar Blue analysis after 24 hours incubation with 10nM C5a. (B) Post-day 60 neuronal cultures showed mRNA expression of C5AR1. No-reverse transcriptase (-RT) and ACTB controls are shown.

116 In the previous mouse studies, as well as being directly toxic, C5a was implicated in increased cell death in the presence of secondary factors such as glucose deprivation and amyloid beta (Aβ) (Pavlovski et al. 2012; Hernandez et al. 2017). As such, we examined the potential for C5a to enhance cell death in the presence of a secondary stressor. Given our interest in exploring the link between C5a function and metabolism, we utilised modulators of the mitochondrial electron transport chain alone or in the presence of C5a. This allowed for interrogation of both the effect of C5a on neurons undergoing oxidative stress and apoptosis, and any potential role of C5a in the regulation of neuronal metabolism.

The inhibitors FCCP and rotenone act on separate complexes in the electron transport chain (Fig. 3C) to induce cell death through different mechanisms. FCCP collapses the proton gradient across the mitochondrial inner membrane, reducing the efficiency of aerobic ATP generation which results in increased respiration to meet ATP requirements (Dispersyn et al. 1999). The dissipation of the inner membrane potential eventually results in outer membrane instability and release of pro-apoptotic factors, as well as depletion of intracellular antioxidant capacity (Dispersyn et al. 1999; Han et al. 2009). In contrast, rotenone inhibits complex 1 to prevent mitochondrial respiration and ATP generation whilst increasing ROS production, resulting in apoptotic cell death (Pei et al. 2003; Radad et al. 2006).

FCCP showed a dose dependent reduction in cell survival (EC50 = 750 nM), with reduced cell number as detected with alamar blue after 24 hours treatment (Fig. 3A). The neurons were more resistant to rotenone induced cell death, with a 30% reduction in cell number after 24 hours (Fig. 3A), which may reflect a resistance of the neurons to primarily oxidative apoptosis in contrast to the membrane destabilisation seen with FCCP. As was seen with the C5a alone treatment, the addition of exogenous C5a to FCCP or rotenone treatments did not alter cell survival (Fig. 3B). There appeared to be a trend in C5a increasing survival in the presence of FCCP, however, this result was not found to be statistically significant over multiple repetitions of the experiment. Together these results suggest that, in this population of human neurons, C5a signalling does not impact on cell survival, either positively or negatively, and has little effect on metabolic flux.

117

Figure 3. C5a does not affect cell survival in the presence of apoptotic inducers. (A) Dose response curves showing cell survival in response to increasing concentrations of FCCP and rotenone after 24 hours. (B) EC50 concentrations were calculated for FCCP and rotenone. The presence of C5a was unable to alter cell survival in the presence of these mitochondrial inhibitors. (C) Illustration of the mechanism of effect for the mitochondrial inhibitors used in this chapter. Rotenone inhibits complex I of the electron transport chain, whilst FCCP acts to dissipate the proton gradient, reducing the efficiency of ATP generation. n.s.= not significant.

118 hESC derived neurons are capable of increasing glycolysis

Finally, we aimed to examine the metabolic capacity of the cortical neuron cultures. The current literature remains in conflict as to the capability of neurons to upregulate glycolysis, with some evidence showing a preference for antioxidant generation and access of metabolic substrates through the ANLS. The metabolic capacity of the neurons was examined using the Seahorse extracellular flux analyser to measure oxygen consumption rate (OCR) and extracellular acidification rate (ECAR). Inhibition of ATP synthase with oligomycin lead to an expected reduction in mitochondrial respiration and drop in OCR (Fig. 4A). Interestingly, a simultaneous increase in ECAR was seen, suggestive of an increase in the rate of glycolysis. This result is in conflict with previous reports in rat studies which showed little increase in ECAR (Almeida et al. 2001), and suggests that neurons are capable of upregulating glycolysis. As was expected, a respective increase and decrease in OCR for FCCP and rotenone treatments was seen, confirming the efficacy and mechanism of action of these molecules in previous results (Fig. 3). Whilst the neurons were capable of increasing glycolysis, the addition of lactate provided a survival advantage to FCCP induced cell death. This suggests a role for ANLS under conditions of substrate depletion as may be seen in ischaemic stroke. Additionally, the ability of lactate to reduce FCCP toxicity confirms that increased energy flux can mitigate the FCCP induced membrane destabilisation. As such, if C5a were to affect energy flux, or apoptotic pathways, a difference in FCCP toxicity would have been seen (Fig 3). Whilst this experiment methodology was optimised to provide a platform to further interrogate the role of C5a in neuronal metabolism and survival; given the non-significant findings for a role of C5a in these functions in previous experiments, C5a treatment with seahorse analysis was not performed.

119 Figure 4. Metabolic capacity of hPSC derived neurons. Neurons were subjected to seahorse flux analysis in the presence of modifiers of mitochondrial respiration (see fig 3C). An illustration of the significance of each chemical use is shown in A. Interestingly, ECAR increased in the presence of oligomycin, suggesting a capacity for the neurons to increase the rate of glycolysis. (B) Lactate addition was able to reduce FCCP induced apoptosis, as detected via alamar blue after 24 hours treatment. OCR = Oxygen consumption rate, ECR = Extracellular acidification rate. ** p≤0.01, ****p≤0.0001

Discussion

The complement anaphylatoxin, C5a, and its receptor C5aR1 have been demonstrated to act not only in the potentiation of the immune response, but in a wide number of non-immune systems. Within the brain, C5aR1 expression has been reported on both glia and neurons with functions of C5aR1 observed both under physiological and pathological conditions (Woodruff et al. 2011; Hawksworth et al. 2016). More specifically, in mature neurons, the effect of C5a has been centred on its actions in cell survival. Reports from separate groups have demonstrated that C5aR1 activation in vitro

120 induces apoptosis of mouse cortical neurons (Pavlovski et al. 2012; Hernandez et al. 2017). Additionally, C5a was shown to enhance toxicity of insults such as glucose deprivation and amyloid beta exposure. This is in contrast to earlier studies on SH-SY5Y cells which showed an effect of C5a in reducing Aβ induced toxicity (O'Barr et al. 2001), which has been suggested to be an artefact of the mutated neuroblastoma cell line (Hernandez et al. 2017).

Here we have utilised hESCs differentiated to post-mitotic cortical neurons to determine the action of C5a signalling in human neurons. In our experimental model, exogenous C5a both alone or in the presence of metabolic/pro-apoptotic stressors, had little effect on neuronal survival. This is in contrast to previous animal studies where a direct neurotoxic effect was seen with exogenous C5a. Our results add to previous observations in terminally differentiated SH-SY5Y neuroblastoma cells, where C5a was reported to ameliorate Aβ induced toxicity (O'Barr et al. 2001). Given the cancerous origins of the SH-SY5Y line, its ability to faithfully recapitulate normal neuronal properties has been rightfully questioned, with the results in conflict to more recent primary mouse studies suggested to be due to an artefact of the mutated cell line. Our observations in hESC derived neurons, in addition to the SH- SY5Y study, may highlight an important discordance in C5aR1 function between rodent and human brains.

Such differences in the complement system between mammalian species are not unprecedented, with the receptors for C3 fragments providing the most striking illustration of mouse-human variation. In humans, the receptors CR1 and CR2 are encoded by separate genes, with the receptors playing separate roles in immune regulation (Jacobson and Weis 2008). In mice however, these receptors are formed via splicing of a single gene, with limited expression. Mice instead express CR1-related gene Y (Crry), which was lost in primate evolution, with the function of Crry replaced in primates by CR1 and CD46. In mice, CD46 expression is restricted to the testis with roles in the acrosome reaction (Jacobson and Weis 2008). In contrast, CD46 in humans is found on all nucleated cells, with additional roles in both regulation of complement and modulation of adaptive immunity (Yamamoto et al. 2013). For C5aR1, the gene shares only 65% between mouse and human (Gerard et al. 1992), and whilst there is conservation of function in innate immune actions, our results may suggest a divergence of non-immune functions in post-mitotic neurons. This is in contrast to neural progenitor cells, where in chapter 3 of this thesis, C5aR1 function was seen to be conserved between mouse and human models of neurogenesis.

Whilst these results strongly suggest a lack of involvement of C5aR1 signalling in both neuronal cell survival and metabolism, there are a number of confounding factors which limit the interpretation of these results, including a poor determination of receptor distribution in the cultures, and limitations of the current capabilities of hESC modelling. The human cortical neurons expressed C5AR1 mRNA,

121 with low protein levels below the threshold of immunocytochemical detection. This has been reported previously in mouse cortical neurons (Hernandez et al. 2017). Additionally, in chapter 3 of this thesis, apical concentration of C5aR1 receptor allowed for protein detection, however, with the addition of DAPT, loss of apical localisation and receptor redistribution lead to loss of protein signal even in the known presence of C5aR1 protein. Taken with these previous results, lack of protein detection does not exclude uniform distribution of C5aR1 expression, however, it may equally be that the expression of C5aR1 was limited to a specific sub-population of cells. The lack of conclusive determination of protein expression hinders the interpretation of subsequent observations, particularly when interpreting negative results such as those obtained in this study.

Additionally, interpretation of the significance of the results of this study is limited by the capacity of PPSC modelling to faithfully reproduce neurons analogous to adult in vivo human neurons. The current state of the field in neuronal modelling with PPSCs is rapidly advancing and provides a powerful tool for both development and disease modelling (Zhu and Huangfu 2013). Improvements in methods for differentiation of PPSCs has resulted in the production of a matured network of post- mitotic neurons capable of both spontaneous and neurotransmitter invoked depolarization (Shi et al. 2012b). Specification of neurons to a cortical phenotype and into further subtypes such as dopaminergic neurons have produced models capable of recapitulating disease phenotypes, allowing for analysis of human development and disease which would otherwise be limited to animal studies (Zhu and Huangfu 2013; Yap et al. 2015). This model provides a number of advantages over animal or mutant cell studies, however, current differentiation protocols are limited in their ability to faithfully produce postnatal neurons. Functional studies have reported PPSC derived neurons such as those used in this chapter display a phenotype resembling foetal and early postnatal rodent neurons (Livesey et al. 2016). Additionally, transcriptomic studies have reported PPSC derived neurons display expression profiles with the highest correlation to midgestational human foetal brain tissue (Stein et al. 2014). Whilst this is a significant improvement over other in vitro cell types such as SH- SY5Y (Livesey et al. 2016), these results show that the current state of the field in PPSC neuronal modelling is limited in its capacity to produce neurons of an adult, or potentially even postnatal, phenotype. As such, the observation of a lack of a role for C5a signalling in human neuronal metabolism and survival, as seen in this study, may not accurately reflect the function of C5a in the adult brain. Regardless of the studies caveats, the addition of these results to those seen in animal and mutant line studies offers another piece in the puzzle behind the functional role of C5a signalling in human neurons.

The experimental results of this study also allowed for the exploration of the capacity of PPSC derived neurons to regulate metabolic pathways. In contrast to the ANLS hypothesis demonstrated in rat

122 neurons, the human neurons displayed a capacity to increase glycolysis in response to metabolic need. Again, this result may reflect species variations between rodent and human neurons. Additionally, if the effect of C5aR1 in mouse neuronal apoptosis was due to an underlying regulation of metabolic flux, the increased capacity of the human neurons to auto-regulate metabolism may be playing a part in the lack of effect seen for C5a-C5aR1 signalling.

It is obvious that further work is required before a sound conclusion can be made on the role of C5aR1 in human adult neurons. With the rapid progression of PPSC differentiation techniques, it is hoped that the maturation of neurons to a cell type more analogous to human adult neurons will be achieved, allowing for repetition and validation of the results of this chapter. In conclusion, the results obtained in this chapter suggest that, in contrast to mouse studies, C5a signalling in cortical neurons has little effect on survival or metabolic signalling pathways. Furthermore, whilst a protective role for lactate can be seen in support of an ANLS hypothesis, the human neurons in this model displayed capacity to upregulate glycolysis, which supports research disputing ANLS validity (Dienel 2012; Patel et al. 2014).

123 References

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127 5. Discussion and Concluding Remarks

The complement system has long stood as a controller of innate immunity. From its first description at the end of the 19th century as a single heat-labile effector of antibody-mediated immunity, knowledge of complement has expanded to reveal a complex and vital family of proteins, capable of controlling the innate immune response through activation and recruitment of immune cells, tagging of pathogens for destruction, and the direct lysis of bacterial pathogens (Kaufmann 2008; Nesargikar et al. 2012). The regard of complement solely as a controller of innate immunity was maintained for almost a century, until the early 90s, with the discovery of seminal complement proteins and the actions of complement C3b and CD46 in facilitating sperm-oocyte interactions, broadening the perspective of complement beyond innate immunity (Anderson et al. 1993). This perspective of complement has rapidly shifted, with the complement system now widely accepted as a multi-faceted family of proteins, capable of not only innate and adaptive immune regulation, but of facilitating a broad number of non-immune actions including the control of tissue morphogenesis, wound healing, and synaptic pruning (Hawksworth et al. 2016). It apparent however, that even with such discoveries, the current knowledge of the full array of complement functions remains limited. Recent examples of the continued surprises which complement can throw at researchers includes the discovery of novel modes for autocrine complement activation, with the discovery of intracellular cleavage of C3 and C5 to activate intracellular complement receptor signalling (Arbore and Kemper 2016; Kolev et al. 2014).

This thesis further explored novel actions of C5a-C5aR1 signalling in development. Through the utilisation of human pluripotent stem cells (PPSCs) for in vitro modelling, the main aims of this thesis were to investigate C5aR1 expression and function at three points in development; in PPSCs representative of the blastocyst inner cell mass, in neural rosettes representative of the developing ventricular zone, and in matured post-mitotic cortical neurons. Overall, the experimental results identified a number of novel functions of C5aR1. In PPSCs, C5aR1 was found to be expressed across a number of PPSC lines, with exogenous C5a promoting maintenance of pluripotency as well as survival following colony dissociation. In neural rosettes, C5aR1 expression was distinctly localised to the apical surface of rosettes, with receptor activation co-ordinating maintenance of cell polarity and cell division under a number of conditions. Whilst in post-mitotic cortical neurons, mRNA expression of C5aR1 was detected, with little effect seen for C5aR1 in modulating either survival or metabolic flux of this neuronal population. In this chapter, these results are contextualised with the current literature, with discussions of their clinical relevance and future directions of this work.

128 C5aR1 in the developing brain

The work in this thesis adds to the current knowledge for the non-immune function of C5aR1 signalling in the developing brain. The expression of C5aR1 on neurons under physiological conditions was first described in 2001 by O’Barr et al., with C5aR1 expression identified in human adult cortical, hippocampal, and cerebellar neurons (O'Barr et al. 2001). Since this time, studies have identified functions of C5aR1 on both neuronal stem cells and in adult neurons (Hawksworth et al. 2016). In combining these results, a consistent role for C5aR1 in foetal neurogenesis is seen, whilst in the adult brain the function of C5aR1 expressed on neurons remains less clear.

In pre-natal development, both this thesis and previous studies have shown C5aR1 signalling to promote proliferation of neural stem cell populations (Rutkowski et al. 2010; Coulthard et al. 2017). Additionally, in chapter 3, a novel function of apically expressed C5aR1 was identified in maintaining polarity and promoting symmetrical division of neural progenitor cells. As a consequence of this function, the perturbation of physiological C5aR1 activity during foetal development, either through pharmacological inhibition or gene deletion, has been shown to negatively impact on neurogenesis, increasing neural tube defect rates, and later, impacting cerebral organisation and cognitive capacity of mice (Gong et al. 2013; Denny et al. 2013; Coulthard et al. 2017). The identification of such a function serves as a herald for increased caution in the use of emerging complement therapeutics during pregnancy. Additionally, it may inform on recent observations of a role for C5aR1 in the neural pathology of prenatal inflammatory conditions.

In contrast to the positive role in neurogenesis which we have described, under states of inflammation, C5aR1 activity has been reported to have a negative impact on neurogenesis. For example, maternal infection with malaria has been linked to C5a-C5aR1 dependent neurocognitive deficits in uninfected offspring (McDonald et al. 2015). Elevated C5a levels have also been observed in the cerebrospinal fluid of preterm neonates, with the inhibition of C5aR1 protective against foetal cortical injury in inflammation/infection associated preterm birth (Pataky et al. 2016; Pedroni et al. 2014). These studies may suggest that a balance of C5aR1 activity is required, with either loss or over-activity of C5aR1 signalling negatively impacting brain development. Alternatively, and perhaps more likely, these studies could highlight at the broader functions of C5aR1. For example, in astrocytes and microglia, a role for C5aR1 in driving inflammation and pathology in the brain has been described in adult neurodegeneration (Woodruff et al. 2010).

In the post-natal brain, whilst there are clear roles for C5aR1 in chronic neuro-inflammation, the physiological action of C5aR1 signalling on neurons remains more ambiguous. Studies have suggested that the function of C5aR1 in driving neurogenesis may have less of a role in maintaining

129 adult neurogenesis (Bogestal et al. 2007). Additionally, in mouse post-mitotic neurons, C5aR1 has been suggested to directly induce apoptosis of neurons, whilst this thesis and others have found either little role, or a protective function of C5aR1 in human neurons of a similar type (Hernandez et al. 2017; O'Barr et al. 2001). As discussed in chapter 4, this may reflect species variations in C5aR1 functioning in adult neurons, or may be a consequence of comparing diverse model systems. Nevertheless, the full function of C5aR1 in the adult brain under physiological or acute disease settings remains poorly defined, and an area of interest for future study.

Therapeutic implications of C5a-C5aR1 inhibition

The potent inflammatory action of C5a-C5aR1 signalling has led to the implication of this pathway in a number of disorders with underlying inflammatory aetiologies (Morgan and Harris 2015; Brennan et al. 2016). As such, the pharmacological inhibition of C5a-C5aR1 presents an attractive option in the treatment of a number of disorders with autoimmune, neurodegenerative, and chronic inflammatory pathologies. A current review of the therapeutic potential and clinical trials of C5a- C5aR1 inhibitors was presented in chapter 1 of this thesis. From this review, it can be seen that there remains a strong interest in the development of C5a-C5aR1 targeted drugs, with an array of molecules in either preclinical development or clinical trials. This includes classes such as peptides, non-peptidic small molecules, aptamers, and monoclonal antibodies. The application of these drugs for the treatment of currently intractable diseases would provide a great therapeutic benefit. However, there remains a growing body of evidence for roles of C5aR1 signalling outside of inflammation and immunity. Within this thesis we have outlined actions of C5aR1 signalling in non-immune cells such as pluripotent stem cells and neural progenitors, which highlights the potential deleterious consequences of C5aR1 inhibition during gestation. Whilst the demonstration of functional expression of C5aR1 in pluripotent stem cells is an interesting discovery, it could be argued that such an in vitro study would poorly reflect the in vivo blastocyst physiology and any potential in vivo action of C5aR1. However, the demonstration of a role for C5aR1 signalling in human neural rosettes, in combination with in vivo mouse studies showing a detrimental effect of C5aR1 inhibition, strongly suggests a physiological role for C5aR1 signalling during human in vivo neurogenesis.

Currently, the only clinically approved therapeutic targeting C5a-C5aR1 remains the humanised antibody eculizumab, granted orphan status for the treatment of paroxysmal nocturnal hemoglobinuria (PNH) and atypical haemolytic uraemic syndrome (aHUS) (Morgan and Harris 2015). Raised against C5, this antibody prevents C5 cleavage to the active fragments, C5a and C5b, with dramatic improvements in patient outcomes for these complement driven diseases. As an

130 antibody therapeutic, the innate restriction of antibody placental transfer may be advantageous for eculizumab, preventing potential neurodevelopmental consequences. Placental transfer of IgG is mediated by Fc receptors, and is dependent on maternal IgG concentration, gestational age, placental integrity, IgG subclass, and nature of antigen (Palmeira et al. 2012). In normal pregnancy, transfer begins at 16 weeks gestation (10% maternal levels), reaching maternal IgG levels at 26 weeks gestation (Saji et al. 1999). Any transfer of eculizumab to the placenta would therefore be restricted during the earlier gestational stages examined in this thesis, limiting potential negative developmental consequences. This has been supported by studies reporting safety of eculizumab in pregnant mothers (Kelly et al. 2015; Miyasaka et al. 2016). Additionally, low detection of eculizumab has been reported in newborns from eculizumab-treated mothers, suggesting poor placental transfer of this antibody even in late gestation (Hallstensen et al. 2015). However, long term data to comprehensively demonstrate the safety of this molecule during pregnancy is awaiting.

Newer therapeutics of varied classes, such as the C5aR1 antagonist CCX168 which is currently in phase II trials, may not possess the same advantageous pharmacokinetic properties as the antibody eculizumab. As such, placental crossing and monitoring of foetal developmental consequences would require close examination before utilising such potentially disease modifying therapeutics during pregnancy.

As discussed previously, animal studies have reported the inhibition of C5aR1 signalling to be protective in preventing foetal cortical injury under inflammatory and infective maternal conditions. Whilst this thesis has identified a physiological role in cortical development, the time period studied corresponds to the first trimester of pregnancy. There is little evidence for negative consequences of C5aR1 inhibition later in pregnancy, however, additional functions of C5aR1 during this time period cannot yet be excluded. Late gestation inhibition of C5aR1 remains a therapeutic option for future consideration in the treatment of inflammatory maternal and foetal/neonatal pathologies.

PPSCs for the study of complement

The development of pluripotent stem cell (PPSC) technology has significantly altered the landscape of scientific discovery, providing a tool for the investigation of developmental processes and study of disease which would otherwise be limited to animal models. This includes the capacity for generation of PPSCs from patients with complex diseases, allowing for the direct study of pathological processes in human disease populations. Within this thesis, PPSCs have been utilised as an in vitro model of human development, to study the expression and functional role of C5aR1 in human PPSCs, neural progenitors, and post-mitotic neurons. To our knowledge, this is the first

131 utilisation of PPSCs to investigate the actions of the complement system. There exists a great potential for the future use of PPSCs for the investigation of complement factors and their function in both in development and disease. This includes the study of novel complement signalling pathways, correlation of animal results to human models, interrogation of human-specific complement factors, and the use of patient derived PPSCs for disease modelling. Here, some of these potential uses are discussed in relation to this thesis.

As discussed in chapter 1, a number of complement proteins have been identified to have novel interactions with non-complement signalling families. Notably, this includes the role of CD46 in modulating notch signalling in T-cells (Le Friec et al. 2012), and C1q activating wnt signalling in cells of skeletal muscle tissue (Naito et al. 2012). These two signalling families have a significant importance in the coordination of a number of developmental processes. However, the exploration for a role of complement in directing these signalling pathways during development has not been described. PPSC modelling provides an ideal platform for the interrogation of such roles, with any discoveries then able to be compared to animal models to allow for discoveries of both human and in vivo significance. The capacity of PPSCs to provide a human model for the study of development, and correlation of animal studies to the human environment, has proven advantageous in this thesis. For example, in chapter 3, the concordance between human and mouse models are supportive of a significant role of C5aR1 in human neurogenesis. Alternatively, the poor correlation of mouse and human models seen in chapter 4 may be suggestive of species variation in the role of C5aR1 in post-mitotic neurons. Additionally, complement proteins such as CD46, with drastically varied tissue distribution and function between rodent and human, are difficult to study in animal models (Yamamoto et al. 2013). PPSC modelling provides a great tool for the study of this complement protein, which has a number of signalling functions outside of complement regulation and likely developmental functions awaiting discovery.

Whilst there is an obvious wealth of potential PPSC technology, the capability of researchers harness this potential remains in its relative infancy. For example, the field of neuronal modelling utilised in this thesis has shown a rapid progression in understanding and techniques required to efficiently generate neuronal populations. This has allowed researchers to progress the understanding of developmental processes and the pathogenesis of neuronal diseases, as well as aiding in the discovery of new therapeutic targets (Zhu and Huangfu 2013; Yap et al. 2015). Whilst advantageous over animal models, the current differentiation techniques remain limited in their ability to faithfully recapitulate characteristics of the human brain, as was discussed in chapter 4. Considering the relative infancy of this field, it is foreseeable that the progression of newer 3d culture systems, and mixed cultures of neurectoderm, microglial, and vascular cells, to model

132 developmental and pathological conditions, will become available, circumventing some of the current limitations of PPSC neuronal modelling (Muffat et al. 2016).

In terms of the study of complement, such advances would be of great interest. In particular, the future capability of PPSCs to model interactions between neurons, glia, and microglia. Animal models have implicated complement proteins in physiological synaptic pruning by microglia, as well as in the pathogenesis of neuroinflammatory disorders such as Alzheimer’s and motor neuron disease (Woodruff et al. 2011). More refined mixed culture systems would allow the investigation of these functions and potential therapeutics in the human environment. A specific example can be identified in the recent literature, where genetic schizophrenia risk has been linked to increased complement levels (Sekar et al. 2016). It has been hypothesised that the altered complement activity may lead to reduced synapse numbers, which is partly supported by animal studies. The ability to use patient derived PPSCs from schizophrenia patients, and model synapse formation and pruning in vivo would provide a unique insight into the pathogenesis of this disorder and the involvement of complement (Quadrato et al. 2016). This example is only one of a vast number of potential applications of PPSCs for the future study of complement in development and disease.

Conclusion

The complement system remains an intriguing family of proteins. Traditionally described as an immune regulator, complement can now be seen as a broad-functioning group of proteins capable of controlling a number of systems. Phylogenetically, the first components of the complement system to emerge are C3, factor B, and MASP, as early as 1300 million years ago in the common ancestor of eumetazoa, (Nonaka and Kimura 2006). Whilst linked to early immune competence, it is possible that the emergence of these proteins was as a controller of sophisticated tissue organisation, as discussed in chapter 1, with immune roles following later in evolution. Regardless of evolutionary origins, complement can now be considered as a family of proteins capable of controlling the proliferation, migration, and survival of a broad number of cell populations, of which just one part lies in immunity. Consistent with this, this thesis has again demonstrated functions of complement in the control of tissue organisation and stem cell populations. The pivotal complement receptor, C5aR1, was demonstrated to be expressed in PPSCs, acting as a regulator of the pluripotent state in vitro, with the in vivo consequence of this function remaining an area of interest for future research. C5aR1 was also shown to act in neural progenitor cells to control proliferation and maintenance of polarity, with loss of C5aR1 resulting in behavioural and structural

133 brain abnormalities. Lastly, the role of C5aR1 in post-mitotic neurons was explored, with little neurotoxic or neuroprotective effect seen, incongruous with previous animal studies. With the wide functions of complement, PPSCs are a powerful tool for the future study of complement proteins in both human development and disease. Capable of exploring novel signalling pathways such as CD46-notch and C1q-wnt in development, as well as providing a modelling system for the delineation of complement involvement in a number of neurodevelopmental and neurodegenerative disorders.

Together, this work adds to the growing body of work identifying novel actions of complement outside of immunity. With the increasing development of C5aR1 targeted therapeutics, this work has a direct clinical significance for guiding the understanding and consideration of potential negative effects of C5aR1 inhibition during pregnancy, particularly early in gestation. With new discoveries of complement functions ever emerging, the full function of complement in development remains unclear. This thesis provides another piece of the puzzle, however, it is likely that the current research has only begun to scratch the surface in delineating the full potential of this complex protein family.

134 References

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