Biological Control of Rhizoctonia Solani by Indigenous Trichoderma Spp
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AFLP Fingerprinting for Identification of Infra-Species Groups of Rhizoctonia Solani and Waitea Circinata Bimal S
atholog P y & nt a M l i P c r Journal of f o o b l i a o Amaradasa et al., J Plant Pathol Microb 2015, 6:3 l n o r g u y DOI: 10.4172/2157-7471.1000262 o J Plant Pathology & Microbiology ISSN: 2157-7471 Research Article Open Access AFLP Fingerprinting for Identification of Infra-Species Groups of Rhizoctonia solani and Waitea circinata Bimal S. Amaradasa1*, Dilip Lakshman2 and Keenan Amundsen3 1Department of Plant Pathology, University of Nebraska-Lincoln, Lincoln, NE 68583, USA 2Floral and Nursery Plants Research Unit and the Sustainable Agricultural Systems Lab, Beltsville Agricultural Research Center-West, Beltsville, MD 20705, USA 3Department of Agronomy and Horticulture, University of Nebraska-Lincoln, Lincoln, NE 68583 USA Abstract Patch diseases caused by Thanatephorus cucumeris (Frank) Donk and Waitea circinata Warcup and Talbot varieties (anamorphs: Rhizoctonia species) pose a serious threat to successful maintenance of several important turfgrass species. Reliance on field symptoms to identify Rhizoctonia causal agents can be difficult and misleading. Different Rhizoctonia species and Anastomosis Groups (AGs) vary in sensitivity to commonly applied fungicides and they also have different temperature ranges conducive for causing disease. Thus correct identification of the causal pathogen is important to predict disease progression and make future disease management decisions. Grouping Rhizoctonia species by anastomosis reactions is difficult and time consuming. Identification of Rhizoctonia isolates by sequencing Internal Transcribed Spacer (ITS) region can be cost prohibitive. Some Rhizoctonia isolates are difficult to sequence due to polymorphism of the ITS region. Amplified Fragment Length Polymorphism (AFLP) is a reliable and cost effective fingerprinting method for investigating genetic diversity of many organisms. -
Proteo-Metabolomic Investigation of Transgenic Rice Unravels Metabolic
www.nature.com/scientificreports OPEN Proteo-metabolomic investigation of transgenic rice unravels metabolic alterations and Received: 27 November 2018 Accepted: 24 June 2019 accumulation of novel proteins Published: xx xx xxxx potentially involved in defence against Rhizoctonia solani Subhasis Karmakar1, Karabi Datta1, Kutubuddin Ali Molla2,3, Dipak Gayen4, Kaushik Das1, Sailendra Nath Sarkar1 & Swapan K. Datta1 The generation of sheath blight (ShB)-resistant transgenic rice plants through the expression of Arabidopsis NPR1 gene is a signifcant development for research in the feld of biotic stress. However, to our knowledge, regulation of the proteomic and metabolic networks in the ShB-resistant transgenic rice plants has not been studied. In the present investigation, the relative proteome and metabolome profles of the non–transformed wild-type and the AtNPR1-transgenic rice lines prior to and subsequent to the R. solani infection were investigated. Total proteins from wild type and transgenic plants were investigated using two-dimensional gel electrophoresis (2-DE) followed by mass spectrometry (MS). The metabolomics study indicated an increased abundance of various metabolites, which draws parallels with the proteomic analysis. Furthermore, the proteome data was cross-examined using network analysis which identifed modules that were rich in known as well as novel immunity-related prognostic proteins, particularly the mitogen-activated protein kinase 6, probable protein phosphatase 2C1, probable trehalose-phosphate phosphatase 2 and heat shock protein. A novel protein, 14–3– 3GF14f was observed to be upregulated in the leaves of the transgenic rice plants after ShB infection, and the possible mechanistic role of this protein in ShB resistance may be investigated further. -
Phylogenetic Relationships of Rhizoctonia Fungi Within the Cantharellales
fungal biology 120 (2016) 603e619 journal homepage: www.elsevier.com/locate/funbio Phylogenetic relationships of Rhizoctonia fungi within the Cantharellales Dolores GONZALEZa,*, Marianela RODRIGUEZ-CARRESb, Teun BOEKHOUTc, Joost STALPERSc, Eiko E. KURAMAEd, Andreia K. NAKATANIe, Rytas VILGALYSf, Marc A. CUBETAb aInstituto de Ecologıa, A.C., Red de Biodiversidad y Sistematica, Carretera Antigua a Coatepec No. 351, El Haya, 91070 Xalapa, Veracruz, Mexico bDepartment of Plant Pathology, North Carolina State University, Center for Integrated Fungal Research, Campus Box 7251, Raleigh, NC 27695, USA cCBS Fungal Biodiversity Centre, Uppsalalaan 8, 3584 CT Utrecht, The Netherlands dDepartment of Microbial Ecology, Netherlands Institute of Ecology (NIOO/KNAW), Droevendaalsesteeg 10, 6708 PB Wageningen, The Netherlands eUNESP, Faculdade de Ci^encias Agronomicas,^ CP 237, 18603-970 Botucatu, SP, Brazil fDepartment of Biology, Duke University, Durham, NC 27708, USA article info abstract Article history: Phylogenetic relationships of Rhizoctonia fungi within the order Cantharellales were studied Received 2 January 2015 using sequence data from portions of the ribosomal DNA cluster regions ITS-LSU, rpb2, tef1, Received in revised form and atp6 for 50 taxa, and public sequence data from the rpb2 locus for 165 taxa. Data sets 1 January 2016 were analysed individually and combined using Maximum Parsimony, Maximum Likeli- Accepted 19 January 2016 hood, and Bayesian Phylogenetic Inference methods. All analyses supported the mono- Available online 29 January 2016 phyly of the family Ceratobasidiaceae, which comprises the genera Ceratobasidium and Corresponding Editor: Thanatephorus. Multi-locus analysis revealed 10 well-supported monophyletic groups that Joseph W. Spatafora were consistent with previous separation into anastomosis groups based on hyphal fusion criteria. -
Protective and Curative Effects of Trichoderma Asperelloides Ta41 on Tomato Root Rot Caused by Rhizoctonia Solani Rs33
agronomy Article Protective and Curative Effects of Trichoderma asperelloides Ta41 on Tomato Root Rot Caused by Rhizoctonia solani Rs33 Ahmed A. Heflish 1, Ahmed Abdelkhalek 2 , Abdulaziz A. Al-Askar 3,* and Said I. Behiry 1 1 Agricultural Botany Department, Faculty of Agriculture (Saba Basha), Alexandria University, Alexandria 21531, Egypt; ahmed_hefl[email protected] (A.A.H.); [email protected] (S.I.B.) 2 Plant Protection and Biomolecular Diagnosis Department, ALCRI, City of Scientific Research and Technological Applications, New Borg El Arab City, Alexandria 21934, Egypt; [email protected] 3 Botany and Microbiology Department, Faculty of Science, King Saud University, Riyadh 11451, Saudi Arabia * Correspondence: [email protected]; Tel.: +96-65-0346-1390 Abstract: Two molecularly identified tomato isolates, Trichoderma asperelloides Ta41 and Rhizoctonia solani Rs33, were characterized and antagonistically evaluated. The dual culture technique showed that Ta41 had a high antagonistic activity of 83.33%, while a light microscope bioassay demonstrated that the Ta41 isolate over-parasitized the pathogen completely. Under greenhouse conditions, the application of Ta41 was able to promote tomato plant growth and had a significant increase in plant height, root length, and shoot fresh, shoot dry, root fresh, and root dry weight. It also improved chlorophyll content and total phenol content significantly, both in protective and in curative treat- ments. The protective treatment assay exhibited the lowest disease index (16.00%), while the curative treatment showed a disease index of 33.33%. At 20 days post-inoculation, significant increases in the relative expression levels of four defense-related genes (PR-1, PR-2, PR-3, and CHS) were observed in all Ta41-treated plants when compared with the non-treated plants. -
Occurrence and Anastomosis Grouping of Rhizoctonia Spp
Journal of Fungi Article Occurrence and Anastomosis Grouping of Rhizoctonia spp. Inducing Black Scurf and Greyish-White Felt-Like Mycelium on Carrot in Sweden Shirley Marcou 1,†, Mariann Wikström 2,†, Sara Ragnarsson 3, Lars Persson 4 and Monica Höfte 1,* 1 Department of Plants and Crops, Faculty of Bioscience Engineering, Ghent University, 9000 Ghent, Belgium; [email protected] 2 Agro Plantarum AB, Kärrarpsvägen 410, S-265 90 Åstorp, Sweden; [email protected] 3 Swedish Board of Agriculture, Elevenborgsvägen 4, S-234 56 Alnarp, Sweden; [email protected] 4 Brandsberga Gård AB/Agri Science Sweden AB, Brandsberga Gård 210, S-264 53 Ljungbyhed, Sweden; [email protected] * Correspondence: [email protected]; Tel.: +32-9264-6017 † Shared first authors. These authors contributed equally to the manuscript. Abstract: Carrots with different Rhizoctonia-like symptoms were found in the main Swedish carrot production areas from 2001–2020. The most commonly observed symptoms were a greyish-white felt-like mycelium and black scurf, the latter often associated with Rhizoctonia solani anastomosis group (AG) 3-PT on potato. An overall increase in disease incidence in all studied fields over time was observed for both symptoms. The majority of Rhizoctonia isolates sampled from carrot in the period 2015–2020 were identified as AG 3 (45%) and AG 5 (24%), followed by AG 1-IB (13%), AG Citation: Marcou, S.; Wikström, M.; 11 (5%), AG-E (5%), AG BI (3%), AG-K (3%) and AG 4-HGII (2%). To our knowledge, this is the Ragnarsson, S.; Persson, L.; Höfte, M. first report describing AG 5 in Sweden as well as AG 3, AG 11 and AG-E inducing Rhizoctonia-like Occurrence and Anastomosis symptoms on carrot. -
Two New Species and a New Chinese Record of Hypocreaceae As Evidenced by Morphological and Molecular Data
MYCOBIOLOGY 2019, VOL. 47, NO. 3, 280–291 https://doi.org/10.1080/12298093.2019.1641062 RESEARCH ARTICLE Two New Species and a New Chinese Record of Hypocreaceae as Evidenced by Morphological and Molecular Data Zhao Qing Zeng and Wen Ying Zhuang State Key Laboratory of Mycology, Institute of Microbiology, Chinese Academy of Sciences, Beijing, P.R. China ABSTRACT ARTICLE HISTORY To explore species diversity of Hypocreaceae, collections from Guangdong, Hubei, and Tibet Received 13 February 2019 of China were examined and two new species and a new Chinese record were discovered. Revised 27 June 2019 Morphological characteristics and DNA sequence analyses of the ITS, LSU, EF-1a, and RPB2 Accepted 4 July 2019 regions support their placements in Hypocreaceae and the establishments of the new spe- Hypomyces hubeiensis Agaricus KEYWORDS cies. sp. nov. is characterized by occurrence on fruitbody of Hypomyces hubeiensis; sp., concentric rings formed on MEA medium, verticillium-like conidiophores, subulate phia- morphology; phylogeny; lides, rod-shaped to narrowly ellipsoidal conidia, and absence of chlamydospores. Trichoderma subiculoides Trichoderma subiculoides sp. nov. is distinguished by effuse to confluent rudimentary stro- mata lacking of a well-developed flank and not changing color in KOH, subcylindrical asci containing eight ascospores that disarticulate into 16 dimorphic part-ascospores, verticillium- like conidiophores, subcylindrical phialides, and subellipsoidal to rod-shaped conidia. Morphological distinctions between the new species and their close relatives are discussed. Hypomyces orthosporus is found for the first time from China. 1. Introduction Members of the genus are mainly distributed in temperate and tropical regions and economically The family Hypocreaceae typified by Hypocrea Fr. -
Understanding and Managing Rhizoctonia Solani In
UNDERSTANDING AND MANAGING RHIZOCTONIA SOLANI IN SUGARBEET A Thesis Submitted to the Graduate Faculty Of the North Dakota State University of Agriculture and Applied Science By Afsana Noor In Partial Fulfillment of the Requirements for the Degree of MASTER OF SCIENCE Major Department: Plant Pathology May 2013 Fargo, North Dakota North Dakota State University Graduate School Title UNDERSTANDING AND MANAGING RHIZOCTONIA SOLANI IN SUGARBEET By Afsana Noor The Supervisory Committee certifies that this disquisition complies with North Dakota State University’s regulations and meets the accepted standards for the degree of MASTER OF SCIENCE SUPERVISORY COMMITTEE: Dr. Mohamed Khan Chair Dr. Luis del Rio Dr. Marisol Berti Dr. Melvin Bolton Approved: Dr. Jack B. Rasmussen 10/04/13 Date Department Chair ABSTRACT Rhizoctonia crown and root rot of sugarbeet (Beta vulgaris L.) caused by Rhizoctonia solani Kühn is one of the most important production problems in Minnesota and North Dakota. Greenhouse studies were conducted to determine the efficacy of azoxystrobin to control R. solani at seed, cotyledonary, 2-leaf and 4-leaf stages of sugarbeet; compatibility, safety, and efficacy of mixing azoxystrobin with starter fertilizers to control R. solani; and the effect of placement of azoxystrobin in control of R. solani. Results demonstrated that azoxystrobin provided effective control applied in-furrow or band applications before infection at all sugarbeet growth stages evaluated; mixtures of azoxystrobin and starter fertilizers were compatible, safe, and provided control of R. solani; and azoxystrobin provided effective control against R. solani when placed in contact over the sugarbeet root or into soil close to the roots. -
Trichoderma: the “Secrets” of a Multitalented Biocontrol Agent
plants Review Trichoderma: The “Secrets” of a Multitalented Biocontrol Agent 1, 1, 2 3 Monika Sood y, Dhriti Kapoor y, Vipul Kumar , Mohamed S. Sheteiwy , Muthusamy Ramakrishnan 4 , Marco Landi 5,6,* , Fabrizio Araniti 7 and Anket Sharma 4,* 1 School of Bioengineering and Biosciences, Lovely Professional University, Jalandhar-Delhi G.T. Road (NH-1), Phagwara, Punjab 144411, India; [email protected] (M.S.); [email protected] (D.K.) 2 School of Agriculture, Lovely Professional University, Delhi-Jalandhar Highway, Phagwara, Punjab 144411, India; [email protected] 3 Department of Agronomy, Faculty of Agriculture, Mansoura University, Mansoura 35516, Egypt; [email protected] 4 State Key Laboratory of Subtropical Silviculture, Zhejiang A&F University, Hangzhou 311300, China; [email protected] 5 Department of Agriculture, University of Pisa, I-56124 Pisa, Italy 6 CIRSEC, Centre for Climatic Change Impact, University of Pisa, Via del Borghetto 80, I-56124 Pisa, Italy 7 Dipartimento AGRARIA, Università Mediterranea di Reggio Calabria, Località Feo di Vito, SNC I-89124 Reggio Calabria, Italy; [email protected] * Correspondence: [email protected] (M.L.); [email protected] (A.S.) Authors contributed equal. y Received: 25 May 2020; Accepted: 16 June 2020; Published: 18 June 2020 Abstract: The plant-Trichoderma-pathogen triangle is a complicated web of numerous processes. Trichoderma spp. are avirulent opportunistic plant symbionts. In addition to being successful plant symbiotic organisms, Trichoderma spp. also behave as a low cost, effective and ecofriendly biocontrol agent. They can set themselves up in various patho-systems, have minimal impact on the soil equilibrium and do not impair useful organisms that contribute to the control of pathogens. -
<I>Rhizoctonia Solani</I>
University of Nebraska - Lincoln DigitalCommons@University of Nebraska - Lincoln Theses, Dissertations, and Student Research in Agronomy and Horticulture Department Agronomy and Horticulture Spring 5-20-2016 Identification of QTLs for Resistance Against Rhizoctonia solani and Phoma glycinicola in Soybeans (Glycine max L. Merr) Herbert Sserunkuma University of Nebraska-Lincoln Follow this and additional works at: http://digitalcommons.unl.edu/agronhortdiss Part of the Genetics Commons, Molecular Genetics Commons, and the Other Genetics and Genomics Commons Sserunkuma, Herbert, "Identification of QTLs for Resistance Against Rhizoctonia solani and Phoma glycinicola in Soybeans (Glycine max L. Merr)" (2016). Theses, Dissertations, and Student Research in Agronomy and Horticulture. 103. http://digitalcommons.unl.edu/agronhortdiss/103 This Article is brought to you for free and open access by the Agronomy and Horticulture Department at DigitalCommons@University of Nebraska - Lincoln. It has been accepted for inclusion in Theses, Dissertations, and Student Research in Agronomy and Horticulture by an authorized administrator of DigitalCommons@University of Nebraska - Lincoln. IDENTIFICATION OF QTLS FOR RESISTANCE AGAINST RHIZOCTONIA SOLANI AND PHOMA GLYCINICOLA IN SOYBEANS (GLYCINE MAX L. MERR) By Herbert Sserunkuma A THESIS Presented to the Faculty of The Graduate College at the University of Nebraska In Partial Fulfillment of Requirements For the Degree of Master of Science Major: Agronomy Under the Supervision of Professor George L. Graef Lincoln, Nebraska May, 2016 IDENTIFICATION OF QTLS FOR RESISTANCE AGAINST RHIZOCTONIA SOLANI AND PHOMA GLYCINICOLA IN SOYBEANS (GLYCINE MAX L. MERR) Herbert Sserunkuma, M.S. University of Nebraska, 2016 Advisor: George L. Graef A QTL (Quantitative trait locus) is a chromosome location of a gene controlling a specific phenotypic trait. -
Measurement and Inheritance of Resistance to Sheath Blight Caused by Rhizoctonia Solani Kuhn in Rice
Louisiana State University LSU Digital Commons LSU Historical Dissertations and Theses Graduate School 1998 Measurement and Inheritance of Resistance to Sheath Blight Caused by Rhizoctonia Solani Kuhn in Rice. Xueyan Sha Louisiana State University and Agricultural & Mechanical College Follow this and additional works at: https://digitalcommons.lsu.edu/gradschool_disstheses Recommended Citation Sha, Xueyan, "Measurement and Inheritance of Resistance to Sheath Blight Caused by Rhizoctonia Solani Kuhn in Rice." (1998). LSU Historical Dissertations and Theses. 6790. https://digitalcommons.lsu.edu/gradschool_disstheses/6790 This Dissertation is brought to you for free and open access by the Graduate School at LSU Digital Commons. It has been accepted for inclusion in LSU Historical Dissertations and Theses by an authorized administrator of LSU Digital Commons. For more information, please contact [email protected]. INFORMATION TO USERS This manuscript has been reproduced from the microfilm master. UMI films the text directly from the original or copy submitted. Thus, some thesis and dissertation copies are in typewriter face, while others may be from any type of computer printer. The quality of this reproduction is dependent upon the quality of the copy submitted. Broken or indistinct print, colored or poor quality illustrations and photographs, print bleedthrough, substandard margins, and improper alignment can adversely affect reproduction. In the unlikely event that the author did not send UMI a complete manuscript and there are missing pages, these will be noted. Also, if unauthorized copyright material had to be removed, a note will indicate the deletion. Oversize materials (e.g., maps, drawings, charts) are reproduced by sectioning the original, beginning at the upper left-hand comer and continuing from left to right in equal sections with small overlaps. -
Rhizoctonia Solani As a Potato Pathogen
View metadata, citation and similar papers at core.ac.uk brought to you by CORE provided by Helsingin yliopiston digitaalinen arkisto RHIZOCTONIA SOLANI AS A POTATO PATHOGEN - VARIATION OF ISOLATES IN FINLAND AND HOST RESPONSE MARI J LEHTONEN Department of Applied Biology Faculty of Agriculture and Forestry Viikki Graduate School in Molecular Biosciences University of Helsinki Finland ACADEMIC DISSERTATION IN PLANT PATHOLOGY To be presented, with permission of the Faculty of Agriculture and Forestry of the University of Helsinki, for public criticism in Viikki, Auditorium B5 (Forest Sciences building, Latokartanonkaari 9), on May 12th 2009, at 12 o'clock noon. Supervisor: Academy Professor Jari PT Valkonen Department of Applied Biology Plant Pathology Laboratory University of Helsinki Finland Reviewers: Professor (Emer.) Marjatta Raudaskoski Laboratory of Plant Physiology and Molecular Biology University of Turku Finland Senior Scientist, PhD Annemarie Fejer Justesen Department of Integrated Pest Management Research Centre Flakkebjerg Slagelse Denmark Opponent: Associate Professor, Associate Dean Suha Jabaji Faculty of Agricultural & Environmental Sciences Plant Science McGill University Montreal, Quebec Canada Custos: Professor Minna Pirhonen Department of Applied Biology Plant Pathology Laboratory University of Helsinki Finland ISSN 1795-7079, 16/2009 ISBN 978-952-10-5474-7 (paperback) ISBN 978-952-10-5475-4 (PDF) http://ethesis.helsinki.fi Yliopistopaino Helsinki 2009 Lehtonen MJ, 2009 2 CONTENT LIST OF ORIGINAL PUBLICATIONS ........................................................................................ -
Biocontrol Potential of Trichoderma Viride, Pseudomonas Fluorescens for Fusarium Wilt of Cowpea (Vigna Unguiculata L.)
International Journal of Agricultural Technology 2020 Vol. 16(2): 377-392 Available online http://www.ijat-aatsea.com ISSN 2630-0192 (Online) Biocontrol potential of Trichoderma viride, Pseudomonas fluorescens for Fusarium wilt of cowpea (Vigna unguiculata L.) Ramasamy, P. and Sundaram, L.* Department of Botany, School of Life Sciences, Periyar University, Salem. Tamil Nadu, India. Ramasamy, P. and Sundaram, L. (2020). Biocontrol potential of Trichoderma viride, Pseudomonas fluorescens for fusarium wilt of cow pea (Vigna unguiculata L.). International Journal of Agricultural Technology 16(2): 377-392. Abstract Trichoderma viride (MH333256), Pseudomonas fluorescens (Ps01), Fusarium oxysporum (Fu04) were morphological identified and biochemical characterization was determined under compound microscope. All isolates were phylogenetic confirmed by genetic DNA isolation and PCR analysis. The healthy seeds of Cowpea (Vigna unguiculata L.) were used in experiment. Results described in treatments of control, Ps01, Tr02, Fu04, Ps01+ Fu04, Tr02+ Fu04, Ps01+ Fu04+Tr02, after inoculation to the seeds sown in the pots. In pot experiment, the bio-inoculated plant (Tr02) significantly enhanced the plant biomass, chlorophyll, nitrogen, NPK content and soil microbial population after 45 DAI. Bioinoculant (Tr02, Ps01) highly inhibited plant pathogen (Fu04) and increased in plant fresh weight (13.4 g) when compared to the control (9 g) and Fu04 (6 g). Keywords: Trichoderma viride, Pseudomonas fluorescens, Fusarium oxysporum, Siderophore, Phosphate solublization Introduction Soil-borne pathogens cause the diseases leading to low quality and yield of the crops. Fungi is the most important soil-borne pathogens that damaged the several major crops. Pythium, Botrytis, Rhizoctonia and Fusarium are found to be the main pathogenic fungi (Djonovic et al., 2007).