Newer Immunosuppressive Drugs: a Review
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Erythrinin C, from the Root of Pueraria Peduncularis, Is a Potential Antagonist Against DHODH, a Therapeutic Target in Acute Myeloid Leukemia: an in Silico Study
Erythrinin C, from the Root of Pueraria peduncularis, is a potential antagonist against DHODH, a therapeutic target in Acute Myeloid Leukemia: An in silico study ABSTRACT Acute myeloid leukaemia (AML) is the second most common form of leukaemia with an annual incidence of 3.6 per 100,000 adults in the United States. A 5-year survival rate of a person with AML is less than 50%. Myeloid leukemogenesis has been reported to arise by a differentiation arrest at early progenitor stage of hematopoietic maturation of the bone marrow; this has led researchers to identify the human dihydroorotate dehydrogenase (DHODH) to be a therapeutic target in the differentiation therapy for AML. Several inhibitors of DHODH have been developed; however only a few have reached clinical trials of which include Brequinar, a strong DHODH inhibitor. Brequinar has reached a phase 2 clinical trials, however, several complication and toxicities have been reported in phase 1 clinical trials in patients with solid tumours. This ranges from myelosupression, thrombocytopenia, nausea, vomiting, skin rashes, mucositis, and this limit its use in AML. In view of this, research is focused on identifying potent DHODH inhibitors with little or no toxic effect that can be used in the differentiation therapy of AML. Pueraria peduncularis belongs to the Leguminosae family and it is widely distributed in some parts of China, India, Pakistan, Nepal and Burma. A recent study has accessed and reported that flavonoids from root of Pueraria peduncularis have anti-tumour effects against cancer cell lines. The aim of this study was to analyse flavonoids from (plant source) root of Pueraria peduncularis for their DHODH inhibitory potential via computational docking studies. -
DHODH and Cancer: Promising Prospects to Be Explored
Zhou et al. Cancer & Metabolism (2021) 9:22 https://doi.org/10.1186/s40170-021-00250-z REVIEW Open Access DHODH and cancer: promising prospects to be explored Yue Zhou1, Lei Tao1, Xia Zhou1, Zeping Zuo2, Jin Gong1, Xiaocong Liu1, Yang Zhou1, Chunqi Liu1, Na Sang1, Huan Liu3, Jiao Zou1, Kun Gou1, Xiaowei Yang1 and Yinglan Zhao1,3* Abstract Human dihydroorotate dehydrogenase (DHODH) is a flavin-dependent mitochondrial enzyme catalyzing the fourth step in the de novo pyrimidine synthesis pathway. It is originally a target for the treatment of the non-neoplastic diseases involving in rheumatoid arthritis and multiple sclerosis, and is re-emerging as a validated therapeutic target for cancer therapy. In this review, we mainly unravel the biological function of DHODH in tumor progression, including its crucial role in de novo pyrimidine synthesis and mitochondrial respiratory chain in cancer cells. Moreover, various DHODH inhibitors developing in the past decades are also been displayed, and the specific mechanism between DHODH and its additional effects are illustrated. Collectively, we detailly discuss the association between DHODH and tumors in recent years here, and believe it will provide significant evidences and potential strategies for utilizing DHODH as a potential target in preclinical and clinical cancer therapies. Keywords: Cancer metabolism, Dihydroorotate dehydrogenase, DHODH inhibitors, De novo pyrimidine biosynthesis, Mitochondria Introduction active to meet the increased demand for nucleic acid pre- Cellular metabolism is the basis of all biological activ- cursors and other cellular components [2]. Compared ities. Metabolic dysregulation, an emerging hallmark of with normal proliferous cells, there is a significant imbal- cancer, contributes to maintain cell proliferation, migra- ance of pyrimidine metabolism in cancer cells which is tion, and differentiation during tumorigenesis and pro- stringently linked with tumor transformation and progres- gression [1]. -
Design and Synthesis of Novel Dihydroorotate Dehydrogenase Inhibitors by Joseph T. Madak a Dissertation Submitted in Partial
Design and Synthesis of Novel Dihydroorotate Dehydrogenase Inhibitors by Joseph T. Madak A dissertation submitted in partial fulfillment of the requirements for the degree of Doctor of Philosophy (Medicinal Chemistry) in the University of Michigan 2018 Doctoral Committee: Professor Nouri Neamati, Co-Chair Professor Hollis Showalter, Co-Chair Professor Zaneta Nikolovska-Coleska Professor Matthew Soellner Joseph T. Madak [email protected] ORCID 0000-0003-1079-8151 © Joseph Madak 2018 All Rights Reserved Acknowledgements The work described in this thesis would not be possible without a few people. First, I would like to thank Dr. Hollis Showalter and Dr. Nouri Neamati for being my co-mentors. Dr. Showalter is an exceptionally knowledgeable synthetic chemist/scientist and I am very grateful for his advice. Throughout my tenure, he was always willing to help. I am fortunate to be co- mentored by him. The same can be said for Dr. Nouri Neamati. Dr. Neamati gave me an opportunity to research while managing a chemistry lab. I have learned much from my time in his lab and from his advice over the years. I’d like to thank both of my mentors for their time, tolerance, and guidance. Additionally, I’d like to thank my committee members Dr. Matthew Soellner and Dr. Zaneta Nikolovska-Coleska. I am grateful for their time, effort, and thought- provoking questions. From the Showalter lab, I’d like to thank Rod Sorenson, Yafei Jin, Xinmin Gan, and Dr. Fardokht Abulwerdi for their help. When I first joined this lab, I had very little organic chemistry experience. The listed individuals all took time to answer my questions and teach me new techniques. -
MASARYK UNIVERSITY Molecular Modeling of Enzymes' Substrate
MASARYK UNIVERSITY FACULTY OF SCIENCE DEPARTMENT OF EXPERIMENTAL BIOLOGY LOSCHMIDT LABORATORIES Molecular modeling of enzymes’ substrate specificity Doctoral dissertation Lukáš Daniel Supervisors: Prof. Mgr. Jiří Damborský, Dr. Mgr. Jan Brezovský, Ph.D. Brno 2016 Poděkování Rád bych poděkoval svému školiteli Jiřímu Damborskému nejen za umožnění studia v Loschmidtových laboratořích, ale především za odborné vedení během mého akademického dozrávání, povzbuzení a za ochotu a čas věnovaných do četných diskuzí. Velmi děkuji i Janu Brezovskému za trpělivost a cenné rady poskytované během mého studia. Děkuji také všem současným i minulým kolegům, kteří formovali Loschmidtovy laboratoře po vědecké i lidské stránce v místo, které je velmi přívětivé a inspirující pro každodenní práci. Největší poděkování však patří mým rodičům a blízkým za neutuchající podporu a důvěru v mém studijním i osobním životě. Bibliographic entry Author: Mgr. Lukáš Daniel Loschmidt laboratories Department of Experimental Biology Faculty of Science Masaryk University Title of dissertation: Molecular modeling of enzymes’ substrate specificity Study programme: Biology Supervisor: prof. Mgr. Jiří Damborský, Dr. Supervisor-specialist: Mgr. Jan Brezovský, Ph.D. Year of defence: 2016 Keywords: biocatalysis, substrate specificity, haloalkane dehalogenases, virtual screening, protein engineering, protein tunnel Bibliografický záznam Autor: Mgr. Lukáš Daniel Loschmidtovy laboratoře Ústav experimentální biologie Přírodovědecká fakulta Masarykova univerzita Název disertace: Molekulové modelování substrátové specificity enzymů Studijní obor: Biologie Školitel: prof. Mgr. Jiří Damborský, Dr. Školitel specialista: Mgr. Jan Brezovský, Ph.D. Rok obhajoby: 2016 Klíčová slova: biokatalýza, substrátová specifita, halogenalkandehalogenasy, virtuální screening, proteinové inženýrství, proteinový tunel Zvítězí, kdo vytrvá. © Lukáš Daniel, Masaryk University 2016 CONTENTS MOTIVATION 1 SUMMARY 2 SHRNUTÍ 4 INTRODUCTION 7 1. Enzyme biotechnology 7 2. -
Inhibition of Metabolic Enzymes As Differentiation Therapy in Acute Myeloid Leukemia
Inhibition of Metabolic Enzymes as Differentiation Therapy in Acute Myeloid Leukemia The Harvard community has made this article openly available. Please share how this access benefits you. Your story matters Citable link http://nrs.harvard.edu/urn-3:HUL.InstRepos:37945013 Terms of Use This article was downloaded from Harvard University’s DASH repository, and is made available under the terms and conditions applicable to Other Posted Material, as set forth at http:// nrs.harvard.edu/urn-3:HUL.InstRepos:dash.current.terms-of- use#LAA Inhibition of Metabolic Enzymes as Differentiation Therapy in Acute Myeloid Leukemia A dissertation presented by Jason Michael Law to The Department of Chemistry and Chemical Biology in partial fulfillment of the requirements for the degree of Doctor of Philosophy in the subject of Chemistry Harvard University Cambridge, Massachusetts October, 2016 © 2016 Jason Michael Law All rights reserved Dissertation Advisor: Professor Stuart L. Schreiber Jason Michael Law Inhibition of Metabolic Enzymes as Differentiation Therapy in Acute Myeloid Leukemia Abstract Acute myeloid leukemia (AML) is among the deadliest of cancers: it carries a 27% 5-year survival rate and is responsible for over 10,000 deaths annually in the United States alone. Despite the clear medical need, new therapeutics effective in most AML patients have not been developed in forty years, and cytotoxic chemotherapy remains the typical treatment. Fortunately, advances in the understanding of AML biology have the potential to lead to new treatments. A hallmark of AML is the differentiation block: cancer cells are halted at an early phase of hematopoietic development in which they are programmed to proliferate rapidly. -
UNIVERSIDADE DE SÃO PAULO Triagem De Inibidores
UNIVERSIDADE DE SÃO PAULO FACULDADE DE CIÊNCIAS FARMACÊUTICAS DE RIBEIRÃO PRETO LUCAS APOLINÁRIO CHIBLI Triagem de inibidores da enzima DHODH de Leishmania major em Asteraceae: estudos metabolômicos e da relação estrutura-atividade quantitativa (QSAR) Ribeirão Preto 2018 LUCAS APOLINÁRIO CHIBLI Triagem de inibidores da enzima DHODH de Leishmania major em Asteraceae: estudos metabolômicos e da relação estrutura-atividade quantitativa (QSAR) Tese de Doutorado apresentada ao Programa de Pós-Graduação em Ciências Farmaceûticas da Faculdade de Ciências Farmacêuticas de Ribeirão Preto/USP para obtenção do Título de Doutor em Ciências Área de Concentração: Produtos Naturais e Sintéticos. Orientador: Prof. Dr. Fernando Batista da Costa Versão corrigida da Tese de Doutorado apresentada ao Programa de Pós- Graduação em Ciências Farmacêuticas em 05/07/2018. A versão original encontra- se disponível na Faculdade de Ciências Farmacêuticas de Ribeirão Preto/USP. Ribeirão Preto 2018 AUTORIZO A REPRODUÇÃO E DIVULGAÇÃO TOTAL OU PARCIAL DESTE TRABALHO, POR QUALQUER MEIO CONVENCIONAL OU ELETRÔNICO, PARA FINS DE ESTUDO E PESQUISA, DESDE QUE CITADA A FONTE. Chibli, Lucas Apolinário Triagem de inibidores da enzima DHODH de Leishmania major em Asteraceae: estudos metabolômicos e da relação estrutura-atividade (QSAR). Ribeirão Preto, 2018. 188 p.; 30cm. Tese de Doutorado, apresentada à Faculdade de Ciências Farmacêuticas de Ribeirão Preto/USP – Área de concentração: Produtos Naturais e Sintéticos. Orientador: Da Costa, Fernando Batista 1. Farmacognosia. 2. Quimioinformática. 3. Metabolômica FOLHA DE APROVAÇÃO Lucas Apolinário Chibli Triagem de inibidores da enzima DHODH de Leishmania major em Asteraceae: estudos metabolômicos e da relação estrutura-atividade quantitativa (QSAR) Tese de Doutorado apresentada ao Programa de Pós-Graduação em Ciências Farmacêuticas da Faculdade de Ciências Farmacêuticas de Ribeirão Preto/USP para obtenção do Título de Doutor em Ciências Área de Concentração: Produtos Naturais e Sintéticos.