Wearable Neuroimaging: Combining and Contrasting Magnetoencephalography and Electroencephalography
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Electroencephalography (EEG)-Based Brain Computer Interfaces for Rehabilitation
Virginia Commonwealth University VCU Scholars Compass Theses and Dissertations Graduate School 2012 Electroencephalography (EEG)-based brain computer interfaces for rehabilitation Dandan Huang Virginia Commonwealth University Follow this and additional works at: https://scholarscompass.vcu.edu/etd Part of the Biomedical Engineering and Bioengineering Commons © The Author Downloaded from https://scholarscompass.vcu.edu/etd/2761 This Dissertation is brought to you for free and open access by the Graduate School at VCU Scholars Compass. It has been accepted for inclusion in Theses and Dissertations by an authorized administrator of VCU Scholars Compass. For more information, please contact [email protected]. School of Engineering Virginia Commonwealth University This is to certify that the dissertation prepared by Dandan Huang entitled “Electroencephalography (EEG)-based brain computer interfaces for rehabilitation” has been approved by her committee as satisfactory completion of the dissertation requirement for the degree of Doctoral of Philosophy. Ou Bai, Ph.D., Director of Dissertation, School of Engineering Ding-Yu Fei, Ph.D., School of Engineering Azhar Rafiq, M.D., School of Medicine Martin L. Lenhardt, Ph.D., School of Engineering Kayvan Najarian, Ph.D., School of Engineering Gerald Miller, Ph.D., Chair, Department of Biomedical Engineering, School of Engineering Rosalyn Hobson, Ph.D., Associate Dean of Graduate Studies, School of Engineering Charles J. Jennett, Ph.D., Dean, School of Engineering F. Douglas Boudinot, Ph.D., Dean of the Graduate School ______________________________________________________________________ Date © Dandan Huang 2012 All Rights Reserved ELECTROENCEPHALOGRAPHY-BASED BRAIN-COMPUTER INTERFACES FOR REHABILITATION A dissertation submitted in partial fulfillment of the requirements for the degree of Doctor of Philosophy at Virginia Commonwealth University. -
A Novel Diagnostic Tool for Concussion
Neurosurg Focus 33 (6):E9, 2012 Magnetoencephalographic virtual recording: a novel diagnostic tool for concussion MATTHEW TORMENTI, M.D.,1 DONALD KRIEGER, PH.D.,1 AVA M. PUCCIO, R.N., PH.D.,1 MALCOLM R. MCNEIL, PH.D.,2 WALTER SCHNEIDER, PH.D.,3 AND DAVID O. OKONKWO, M.D., PH.D.1 Departments of 1Neurological Surgery, 2Communication Science and Disorders, and 3Psychology, University of Pittsburgh, Pennsylvania Object. Heightened recognition of the prevalence and significance of head injury in sports and in combat veter- ans has brought increased attention to the physiological and behavioral consequences of concussion. Current clinical practice is in part dependent on patient self-report as the basis for medical decisions and treatment. Magnetoen- cephalography (MEG) shows promise in the assessment of the pathophysiological derangements in concussion. The authors have developed a novel MEG-based neuroimaging strategy to provide objective, noninvasive, diagnostic information in neurological disorders. In the current study the authors demonstrate a novel task protocol and then assess MEG virtual recordings obtained during task performance as a diagnostic tool for concussion. Methods. Ten individuals (5 control volunteers and 5 patients with a history of concussion) were enrolled in this pilot study. All participants underwent an MEG evaluation during performance of a language/spatial task. Each individual produced 960 responses to 320 sentence stimuli; 0.3 sec of MEG data from each word presentation and each response were analyzed: the data from each participant were classified using a rule constructed from the data obtained from the other 9 participants. Results. Analysis of response times showed significant differences (p < 10-4) between concussed and normal groups, demonstrating the sensitivity of the task. -
Epilepsy the Term Epilepsy Describes Brain Disorders That Involve Repeated Seizures
Epilepsy The term epilepsy describes brain disorders that involve repeated seizures. Seizures are sudden, uncontrollable waves of electrical activity in the brain that cause involuntary movement, a change in attention, or loss of consciousness. They may involve the entire brain or take place in one part of the brain. Your doctor may use a physical exam, electroencephalogram (EEG), head CT, head MRI or lumbar puncture to diagnose you. Treatment depends on what is causing your seizures. What is epilepsy? The term epilepsy describes brain disorders that involve repeated seizures also called convulsions. A seizure is a sudden, uncontrollable wave of electrical activity in the brain that can affect a person's behavior for a short period of time. For example, there can be involuntary movement, a change in attention, or loss of consciousness. The word epilepsy or seizure does not imply that there is a cause for it. Doctors perform many tests to find the cause for your seizures (such as brain injury, brain bleed, tumor among a few). However, in many cases, the cause of epilepsy cannot be found. A seizure may happen just once, a few or many times over a long period. Symptoms may vary between patients and depend on the type of seizure. They often relate to the normal function of the affected part of the brain. Epilepsy is not contagious. There are two major types of seizures: generalized, in which the entire brain is involved, and focal, in which abnormal activity occurs in one part of the brain. Generalized: seizures involve the entire brain Focal: abnormal activity takes place in just one part of the brain. -
Non-Invasive Functional-Brain-Imaging with a Novel Magnetoencephalography System
Non-Invasive Functional-Brain-Imaging with a Novel Magnetoencephalography System Amir Borna, Member, IEEE, Tony R. Carter, Anthony P. Colombo, Yuan-Yu Jau, Jim McKay, Michael Weisend, Samu Taulu, Julia M. Stephen, and Peter D. D. Schwindt systems benefit from mature technology and analysis methods, Abstract—A non-invasive functional-brain-imaging system they face two limiting factors: 1) fixed sensor positions, and 2) based on optically-pumped-magnetometers (OPM) is presented. high maintenance cost. SQUID sensors operate at ~ 4 K and The OPM-based magnetoencephalography (MEG) system liquid helium is used to achieve cryogenic temperature. Regular features 20 OPM channels conforming to the subject’s scalp. Due to proximity (12 mm) of the OPM channels to the brain, it is costly maintenance is required to fill the helium reservoir and anticipated that this MEG system offers an enhanced spatial calibrate the SQUID-based MEG system, although recent resolution as it can capture finer spatial features compared to advancements in helium recycling [18] is reducing maintenance traditional MEG systems employing superconducting quantum costs. The main limitation of SQUID-based MEG system, interference device (SQUID). We have conducted two MEG which also stems from the use of cryogens, is fixed sensor experiments on three subjects: somatosensory evoked magnetic position. Due to use of liquid helium a thick Dewar is required field (SEF) and auditory evoked magnetic field (AEF) using our OPM-based MEG system and a commercial SQUID-based MEG to isolate the sensors from the room temperature, hence the system. We have cross validated the robustness of our system by fixed position of sensors inside the rigid helmet. -
The First-Night Effect Suppresses the Strength of Slow-Wave
Vision Research 99 (2014) 154–161 Contents lists available at ScienceDirect Vision Research journal homepage: www.elsevier.com/locate/visres The first-night effect suppresses the strength of slow-wave activity originating in the visual areas during sleep ⇑ Masako Tamaki, Ji Won Bang, Takeo Watanabe, Yuka Sasaki Department of Cognitive, Linguistic, and Psychological Sciences, Brown University, Box 1821, 190 Thayer Street, Providence, RI 02912, USA article info abstract Article history: Our visual system is plastic and adaptive in response to the stimuli and environments we experience. Received 2 June 2013 Although visual adaptation and plasticity have been extensively studied while participants are awake, lit- Received in revised form 29 October 2013 tle is known about what happens while they are asleep. It has been documented that sleep structure as Available online 7 November 2013 measured by sleep stages using polysomnography is altered specifically in the first sleep session due to exposure to a new sleep environment, known as the first-night effect (FNE). However, the impact of the Keywords: FNE on spontaneous oscillations in the visual system is poorly understood. How does the FNE affect the Sleep visual system during sleep? To address this question, the present study examined whether the FNE mod- First-night effect ifies the strength of slow-wave activity (SWA, 1–4 Hz)—the dominant spontaneous brain oscillation in Slow-wave activity Adaptation slow-wave sleep—in the visual areas. We measured the strength of SWA originating in the visual areas Plasticity during the first and the second sleep sessions. Magnetoencephalography, polysomnography, and mag- netic resonance imaging were used to localize the source of SWA to the visual areas. -
A National Review of Amplitude Integrated Electroencephalography (Aeeg) A
Issue: Ir Med J; Vol 113; No. 9; P192 A National Review of Amplitude Integrated Electroencephalography (aEEG) A. Jenkinson1, M.A. Boyle2, D. Sweetman1 1. The National Maternity Hospital, Dublin. 2. The Rotunda Hospital, Dublin. Dear Sir, The use of amplitude integrated encephalography (aEEG) has become well integrated into routine care in the neonatal intensive care unit (NICU), to monitor brain function where encephalopathy or seizures are suspected.1 Early aEEG abnormalities and their rate of resolution have clinical and prognostic significance in severely ill newborns with altered levels of consciousness. 2 The most common use of aEEG is in infants with neonatal encephalopathy undergoing therapeutic hypothermia (TH). While TH is performed in tertiary centres, local and regional centres play an important role in the diagnosis and initial management of these infants. The Therapeutic Hypothermia Working Group National Report from 2018 reported that 28/69 (40%) of infants requiring Therapeutic Hypothermia were outborn in local or regional units requiring transfer.3 The report also highlighted that early and accurate aEEG interpretation is important in the care of these infants with many seizures being sub-clinical or electrographic without clinical correlation. We performed a national audit on aEEG in neonatal services in Ireland, surveying 18 neonatal units that are divided into Level 1 (Local), Level 2 (Regional) and Level 3 (Tertiary). One unit was excluded from our study as it provides a continuous EEG monitoring service on a 24-hour basis as part of the Neonatal Brain Research Group. Our findings showed that while no Level 1 unit had aEEG, it is widely available in Level 2 and Level 3 units [3/4 (75%) and 3/3 (100%)] respectively. -
Anesthesia for Anatomical Hemispherectomy, 217 Antiepileptic
Index Note: Page numbers followed by f and t indicate fi gures and tables, respectively. A Anesthesia Academic skills assessment, in neuropsychological assess- for anatomical hemispherectomy, 217 ment, 105 antiepileptic drugs and, 114 Acid-base status, perioperative management of, 114 for awake craniotomy, 116 Adaptive function assessment, in neuropsychological for corpus callosotomy, 116 assessment, 106 for hemispherectomy, 116–117, 217 After-discharges, 31 induction of, 114 Age of patient maintenance of, 115 and adaptive plasticity, 15–16 for posterior quadrantic surgery, 197–198 and cerebral blood fl ow, 113 Sturge-Weber syndrome and, 113 at lesion occurrence, and EEG fi ndings, 16 in surgery for subhemispheric epilepsy, 197–198 and pediatric epilepsy surgery, 3 tuberous sclerosis and, 113 and physiological diff erences, 113 for vagus nerve stimulation, 116 and seizure semiology, 41 Angioma(s) at surgery, and outcomes, 19 cutaneous, in Sturge-Weber syndrome, 206 Airway facial, 206 intraoperative management of, 114–115 Angular gyrus, electrical stimulation of, 48 preoperative evaluation, 113 Anterior lobe lobectomy (ATL) Alien limb phenomenon, stimulation-induced, 49 left (L-ATL), and language function, 76 [11C]Alphamethyl-L-tryptophan (AMT), as PET radiotracer, and memory function, 77–78 83–84, 86 Anteromesial temporal lobectomy (AMTL), 136–146 in extratemporal lobe epilepsy, 86–87, 175 complications of, 144–145 in postsurgical evaluation, 90 craniotomy in, 138, 139f in temporal lobe epilepsy, 86 historical perspective on, 136–137 in tuberous -
Using Amplitude-Integrated EEG in Neonatal Intensive Care
Journal of Perinatology (2010) 30, S73–S81 r 2010 Nature America, Inc. All rights reserved. 0743-8346/10 www.nature.com/jp REVIEW Using amplitude-integrated EEG in neonatal intensive care JD Tao and AM Mathur Department of Pediatrics, Washington University School of Medicine, St Louis, MO, USA monitoring can be applied, for example, to infants admitted with The implementation of amplitude-integrated electroencephalography encephalopathy, seizures or other brain malformations. Both term (aEEG) has enhanced the neurological monitoring of critically ill infants. and preterm infants may benefit from the clinical application of Limited channel leads are applied to the patient and data are displayed in a aEEG findings. Much similar to continuous monitoring of vital semilogarithmic, time-compressed scale. Several classifications are currently signs, bedside aEEG can help guide decision-making in real time in use to describe patient tracings, incorporating voltage criteria, pattern for infants admitted to the NICU. This article will review the recognition, cyclicity, and the presence or absence of seizures. In term history, classification and application of aEEG in both term and neonates, aEEG has been used to determine the prognosis and treatment for preterm infants. those affected by hypoxic–ischemic encephalopathy, seizures, meningitis and even congenital heart disease. Its application as inclusion criteria for therapeutic hypothermia remains controversial. In preterm infants, Background normative values and patterns corresponding to gestational age are being 2 established. As these standards emerge, the predictive value of aEEG Starting in the 1960s, Maynard et al., developed the first use of increases, especially in the setting of preterm brain injury and an instrument to study cerebral activity in resuscitated patients with intraventricular hemorrhage. -
Electroencephalography Source Connectivity: Toward High Time/Space Resolution Brain Networks
Electroencephalography source connectivity: toward high time/space resolution brain networks Hassan M.1, 2 and Wendling F.1, 2 1 University of Rennes 1, LTSI, F-35000 Rennes, France 2INSERM, U1099, F-35000 Rennes, France Abstract— The human brain is a large-scale network which function depends on dynamic interactions between spatially-distributed regions. In the rapidly-evolving field of network neuroscience, two yet unresolved challenges are potential breakthroughs. First, functional brain networks should be estimated from noninvasive and easy to use neuroimaging techniques. Second, the time/space resolution of these techniques should be high enough to assess the dynamics of identified networks. Emerging evidence suggests that Electroencephalography (EEG) source connectivity method may offer solutions to both issues provided that scalp EEG signals are appropriately processed. Therefore, the performance of EEG source connectivity method strongly depends on signal processing (SP) that involves various methods such as preprocessing techniques, inverse solutions, statistical couplings between signals and network science. The main objective of this tutorial-like review is to provide an overview on EEG source connectivity. We describe the major contributions that the SP community brought to this research field. We emphasize the methodological issues that need to be carefully addressed to obtain relevant results and we stress the current limitations that need further investigation. We also report results obtained in concrete applications, in both normal and pathological brain states. Future directions in term of signal processing methods and applications are eventually provided. Index Terms— EEG signal processing, functional brain networks, EEG source connectivity, statistical couplings, inverse solutions. 1 I. INTRODUCTION Over the past decades, neuroscience research has significantly improved our understanding of the normal brain. -
BIDS-EEG: an Extension to the Brain Imaging Data Structure (BIDS) Specification for Electroencephalography
BIDS-EEG: an extension to the Brain Imaging Data Structure (BIDS) Specification for electroencephalography Cyril R Perneta,∗, Stefan Appelhoffb,∗, Guillaume Flandinc, Christophe Phillipsd, Arnaud Delormee,f, Robert Oostenveldg,h aThe University of Edinburgh, Centre for Clinical Brain Sciences (CCBS), Chancellor’s Building, 49 Little France Crescent, Edinburgh EH16 4SB bCenter for Adaptive Rationality, Max Planck Institute for Human Development, Berlin, Germany cWellcome Centre for Human Neuroimaging, UCL Queen Square Institute of Neurology, London WC1N 3BG, UK dGIGA Institute, University of Liège, Liège, Belgium eSCCN, INC, UCSD, La Jolla, CA 95404, USA fCerco, CNRS/UPS, Toulouse, France gRadboud University, Donders Institute for Brain, Cognition and Behaviour. P.O. Box 9101, 6500 HB, Nijmegen, The Netherlands hNatMEG, Karolinska Institutet, Stockholm, Sweden Abstract The Brain Imaging Data Structure (BIDS) project is a quickly evolving effort among the human brain imaging research community to create standards allowing researchers to readily organize and share study data within and between laboratories. The first BIDS standard was proposed for the MRI/fMRI research community and has now been widely adopted. More recently a magnetoencephalography (MEG) data extension, BIDS-MEG, has been published. Here we present an extension to BIDS for electroencephalography (EEG) data, BIDS-EEG, along with tools and references to a series of public EEG datasets organized using this new standard. Keywords: Electroencephalography, EEG, Brain Imaging Data Structure (BIDS), BIDS-EEG, standardization, datasets, formatting, archive Introduction Electroencephalography (EEG) is now almost a century old, with its first application in humans in the 1920s (Berger, 1929). EEG records the electric potential fluctuations at the scalp, primarily from locally synchronous post-synaptic activity in the apical dendrites of pyramidal cells in the cortex. -
Magnetoencephalography: Clinical and Research Practices
brain sciences Review Magnetoencephalography: Clinical and Research Practices Jennifer R. Stapleton-Kotloski 1,2,*, Robert J. Kotloski 3,4 ID , Gautam Popli 1 and Dwayne W. Godwin 1,5 1 Department of Neurology, Wake Forest School of Medicine, Winston-Salem, NC 27101, USA; [email protected] (G.P.); [email protected] (D.W.G.) 2 Research and Education, W. G. “Bill” Hefner Salisbury VAMC, Salisbury, NC 28144, USA 3 Department of Neurology, William S Middleton Veterans Memorial Hospital, Madison, WI 53705, USA; [email protected] 4 Department of Neurology, University of Wisconsin School of Medicine and Public Health, Madison, WI 53726, USA 5 Department of Neurobiology and Anatomy, Wake Forest School of Medicine, Winston-Salem, NC 27101, USA * Correspondence: [email protected]; Tel.: +1-336-716-5243 Received: 28 June 2018; Accepted: 11 August 2018; Published: 17 August 2018 Abstract: Magnetoencephalography (MEG) is a neurophysiological technique that detects the magnetic fields associated with brain activity. Synthetic aperture magnetometry (SAM), a MEG magnetic source imaging technique, can be used to construct both detailed maps of global brain activity as well as virtual electrode signals, which provide information that is similar to invasive electrode recordings. This innovative approach has demonstrated utility in both clinical and research settings. For individuals with epilepsy, MEG provides valuable, nonredundant information. MEG accurately localizes the irritative zone associated with interictal spikes, often detecting epileptiform activity other methods cannot, and may give localizing information when other methods fail. These capabilities potentially greatly increase the population eligible for epilepsy surgery and improve planning for those undergoing surgery. MEG methods can be readily adapted to research settings, allowing noninvasive assessment of whole brain neurophysiological activity, with a theoretical spatial range down to submillimeter voxels, and in both humans and nonhuman primates. -
Noninvasive Electroencephalography Equipment for Assistive, Adaptive, and Rehabilitative Brain–Computer Interfaces: a Systematic Literature Review
sensors Systematic Review Noninvasive Electroencephalography Equipment for Assistive, Adaptive, and Rehabilitative Brain–Computer Interfaces: A Systematic Literature Review Nuraini Jamil 1 , Abdelkader Nasreddine Belkacem 2,* , Sofia Ouhbi 1 and Abderrahmane Lakas 2 1 Department of Computer Science and Software Engineering, College of Information Technology, United Arab Emirates University, Al Ain P.O. Box 15551, United Arab Emirates; [email protected] (N.J.); sofi[email protected] (S.O.) 2 Department of Computer and Network Engineering, College of Information Technology, United Arab Emirates University, Al Ain P.O. Box 15551, United Arab Emirates; [email protected] * Correspondence: [email protected] Abstract: Humans interact with computers through various devices. Such interactions may not require any physical movement, thus aiding people with severe motor disabilities in communicating with external devices. The brain–computer interface (BCI) has turned into a field involving new elements for assistive and rehabilitative technologies. This systematic literature review (SLR) aims to help BCI investigator and investors to decide which devices to select or which studies to support based on the current market examination. This examination of noninvasive EEG devices is based on published BCI studies in different research areas. In this SLR, the research area of noninvasive Citation: Jamil, N.; Belkacem, A.N.; BCIs using electroencephalography (EEG) was analyzed by examining the types of equipment used Ouhbi, S.; Lakas, A. Noninvasive for assistive, adaptive, and rehabilitative BCIs. For this SLR, candidate studies were selected from Electroencephalography Equipment the IEEE digital library, PubMed, Scopus, and ScienceDirect. The inclusion criteria (IC) were limited for Assistive, Adaptive, and to studies focusing on applications and devices of the BCI technology.