Darwinism and Lamarckism Before and After Weismann: a Historical, Philosophical, and Methodological Analysis
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Heritability in the Era of Molecular Genetics: Some Thoughts for Understanding Genetic Influences on Behavioural Traits
European Journal of Personality, Eur. J. Pers. 25: 254–266 (2011) Published online (wileyonlinelibrary.com) DOI: 10.1002/per.836 Heritability in the Era of Molecular Genetics: Some Thoughts for Understanding Genetic Influences on Behavioural Traits WENDY JOHNSON1,2*, LARS PENKE1 and FRANK M. SPINATH3 1Centre for Cognitive Ageing and Cognitive Epidemiology and Department of Psychology, University of Edinburgh, Edinburgh, UK 2Department of Psychology, University of Minnesota, Minneapolis, Minnesota, USA 3Department of Psychology, Saarland University, Saarbruecken, Germany Abstract: Genetic influences on behavioural traits are ubiquitous. When behaviourism was the dominant paradigm in psychology, demonstrations of heritability of behavioural and psychological constructs provided important evidence of its limitations. Now that genetic influences on behavioural traits are generally accepted, we need to recognise the limitations of heritability as an indicator of both the aetiology and likelihood of discovering molecular genetic associations with behavioural traits. We review those limitations and conclude that quantitative genetics and genetically informative research designs are still critical to understanding the roles of gene‐environment interplay in developmental processes, though not necessarily in the ways commonly discussed. Copyright © 2011 John Wiley & Sons, Ltd. Key words: genetic influences; twin study; heritability Much is often made of new findings of the presence of environmental influences but emphasised that these genetic influences -
Transformations of Lamarckism Vienna Series in Theoretical Biology Gerd B
Transformations of Lamarckism Vienna Series in Theoretical Biology Gerd B. M ü ller, G ü nter P. Wagner, and Werner Callebaut, editors The Evolution of Cognition , edited by Cecilia Heyes and Ludwig Huber, 2000 Origination of Organismal Form: Beyond the Gene in Development and Evolutionary Biology , edited by Gerd B. M ü ller and Stuart A. Newman, 2003 Environment, Development, and Evolution: Toward a Synthesis , edited by Brian K. Hall, Roy D. Pearson, and Gerd B. M ü ller, 2004 Evolution of Communication Systems: A Comparative Approach , edited by D. Kimbrough Oller and Ulrike Griebel, 2004 Modularity: Understanding the Development and Evolution of Natural Complex Systems , edited by Werner Callebaut and Diego Rasskin-Gutman, 2005 Compositional Evolution: The Impact of Sex, Symbiosis, and Modularity on the Gradualist Framework of Evolution , by Richard A. Watson, 2006 Biological Emergences: Evolution by Natural Experiment , by Robert G. B. Reid, 2007 Modeling Biology: Structure, Behaviors, Evolution , edited by Manfred D. Laubichler and Gerd B. M ü ller, 2007 Evolution of Communicative Flexibility: Complexity, Creativity, and Adaptability in Human and Animal Communication , edited by Kimbrough D. Oller and Ulrike Griebel, 2008 Functions in Biological and Artifi cial Worlds: Comparative Philosophical Perspectives , edited by Ulrich Krohs and Peter Kroes, 2009 Cognitive Biology: Evolutionary and Developmental Perspectives on Mind, Brain, and Behavior , edited by Luca Tommasi, Mary A. Peterson, and Lynn Nadel, 2009 Innovation in Cultural Systems: Contributions from Evolutionary Anthropology , edited by Michael J. O ’ Brien and Stephen J. Shennan, 2010 The Major Transitions in Evolution Revisited , edited by Brett Calcott and Kim Sterelny, 2011 Transformations of Lamarckism: From Subtle Fluids to Molecular Biology , edited by Snait B. -
High Heritability of Telomere Length, but Low Evolvability, and No Significant
bioRxiv preprint doi: https://doi.org/10.1101/2020.12.16.423128; this version posted December 16, 2020. The copyright holder for this preprint (which was not certified by peer review) is the author/funder. All rights reserved. No reuse allowed without permission. 1 High heritability of telomere length, but low evolvability, and no significant 2 heritability of telomere shortening in wild jackdaws 3 4 Christina Bauch1*, Jelle J. Boonekamp1,2, Peter Korsten3, Ellis Mulder1, Simon Verhulst1 5 6 Affiliations: 7 1 Groningen Institute for Evolutionary Life Sciences, University of Groningen, Nijenborgh 7, 8 9747AG Groningen, The Netherlands 9 2 present address: Institute of Biodiversity Animal Health & Comparative Medicine, College 10 of Medical, Veterinary and Life Sciences, University of Glasgow, Glasgow G12 8QQ, United 11 Kingdom 12 3 Department of Animal Behaviour, Bielefeld University, Morgenbreede 45, 33615 Bielefeld, 13 Germany 14 15 16 * Correspondence to: 17 [email protected] 18 19 Running head: High heritability of telomere length bioRxiv preprint doi: https://doi.org/10.1101/2020.12.16.423128; this version posted December 16, 2020. The copyright holder for this preprint (which was not certified by peer review) is the author/funder. All rights reserved. No reuse allowed without permission. 20 Abstract 21 Telomere length (TL) and shortening rate predict survival in many organisms. Evolutionary 22 dynamics of TL in response to survival selection depend on the presence of genetic variation 23 that selection can act upon. However, the amount of standing genetic variation is poorly known 24 for both TL and TL shortening rate, and has not been studied for both traits in combination in 25 a wild vertebrate. -
Environment-Sensitive Epigenetics and the Heritability of Complex Diseases
INVESTIGATION Environment-Sensitive Epigenetics and the Heritability of Complex Diseases Robert E. Furrow,*,1 Freddy B. Christiansen,† and Marcus W. Feldman* *Department of Biology, Stanford University, Stanford, California 94305, and †Department of Bioscience and Bioinformatics Research Center, University of Aarhus, DK-8000 Aarhus C, Denmark ABSTRACT Genome-wide association studies have thus far failed to explain the observed heritability of complex human diseases. This is referred to as the “missing heritability” problem. However, these analyses have usually neglected to consider a role for epigenetic variation, which has been associated with many human diseases. We extend models of epigenetic inheritance to investigate whether environment-sensitive epigenetic modifications of DNA might explain observed patterns of familial aggregation. We find that variation in epigenetic state and environmental state can result in highly heritable phenotypes through a combination of epigenetic and environmental inheritance. These two inheritance processes together can produce familial covariances significantly higher than those predicted by models of purely epigenetic inheritance and similar to those expected from genetic effects. The results suggest that epigenetic variation, inherited both directly and through shared environmental effects, may make a key contribution to the missing heritability. HE challenges of identifying the common or rare genes a change in DNA sequence. Such modifications include Tthat contribute to the transmission of heritable human methylation of cytosine nucleotides at CpG sites and histone diseases and other complex phenotypes have been discussed protein modification. Such epigenetic modifications may be for some time (Moran 1973; Layzer 1974; Feldman and transmissible across generations or arise de novo each gen- Lewontin 1975; Kamin and Goldberger 2002). -
Monism and Morphology at the Turn of the Twentieth Century
View metadata, citation and similar papers at core.ac.uk brought to you by CORE provided by IUScholarWorks From a draft. May differ from the published version, which appeared in Monism: Science, Philosophy, Religion, and the History of a Worldview, ed. Todd Weir, 135–158, New York: Palgrave USA, 2012. Monism and Morphology at the Turn of the Twentieth Century SANDER GLIBOFF Indiana University Abstract. Ernst Haeckel’s monistic worldview and his interpretation of Darwin’s theory of evolution worked together to help him rule out any role for divine providence or any non-material mind, spirit, will, or purpose in the organic world. In his account of 1866, the impersonal, unpredictable, and purposeless external environment was what drove evolutionary change. By around the turn of the twentieth century, however, new theories of evolution, heredity, and embryology were challenging Haeckel’s, but Haeckel no longer responded with his earlier vigor. Younger monistically oriented evolutionary biologists had to take the lead in modernizing and defending the monistic interpretation and the external causes of evolution. Three of these younger biologists are discussed here: Haeckel’s student, the morphologist-turned-theoretician Richard Semon (1859–1918); Ludwig Plate (1862–1937), who took over Haeckel’s chair at the University of Jena and became an influential journal editor and commentator on new research on heredity and evolution; and Paul Kammerer (1880–1926), whose experimental evidence for the modifying power of the environment was hotly debated. Despite their very different social, political, and religious backgrounds, their contrasting research methods and career trajectories, and their disagreements on the precise mechanisms of evolution, these three were united by their adherence to Haeckelian monistic principles. -
Metazoan Ribosome Inactivating Protein Encoding Genes Acquired by Horizontal Gene Transfer Received: 30 September 2016 Walter J
www.nature.com/scientificreports OPEN Metazoan Ribosome Inactivating Protein encoding genes acquired by Horizontal Gene Transfer Received: 30 September 2016 Walter J. Lapadula1, Paula L. Marcet2, María L. Mascotti1, M. Virginia Sanchez-Puerta3 & Accepted: 5 April 2017 Maximiliano Juri Ayub1 Published: xx xx xxxx Ribosome inactivating proteins (RIPs) are RNA N-glycosidases that depurinate a specific adenine residue in the conserved sarcin/ricin loop of 28S rRNA. These enzymes are widely distributed among plants and their presence has also been confirmed in several bacterial species. Recently, we reported for the first timein silico evidence of RIP encoding genes in metazoans, in two closely related species of insects: Aedes aegypti and Culex quinquefasciatus. Here, we have experimentally confirmed the presence of these genes in mosquitoes and attempted to unveil their evolutionary history. A detailed study was conducted, including evaluation of taxonomic distribution, phylogenetic inferences and microsynteny analyses, indicating that mosquito RIP genes derived from a single Horizontal Gene Transfer (HGT) event, probably from a cyanobacterial donor species. Moreover, evolutionary analyses show that, after the HGT event, these genes evolved under purifying selection, strongly suggesting they play functional roles in these organisms. Ribosome inactivating proteins (RIPs, EC 3.2.2.22) irreversibly modify ribosomes through the depurination of an adenine residue in the conserved alpha-sarcin/ricin loop of 28S rRNA1–4. This modification prevents the binding of elongation factor 2 to the ribosome, arresting protein synthesis5, 6. The occurrence of RIP genes has been exper- imentally confirmed in a wide range of plant taxa, as well as in several species of Gram positive and Gram negative bacteria7–9. -
The Importance of Heritability in Psychological Research: the Case of Attitudes
Psychological Review Copyright 1993 by the American Psychological Association, Inc. 1993, Vol. 100, No. 1,129-142 0033-295X/93/S3.00 The Importance of Heritability in Psychological Research: The Case of Attitudes Abraham Tesser It is argued that differences in response heritability may have important implications for the testing of general psychological theories, that is, responses that differ in heritability may function differ- ently. For example, attitudes higher in heritability are shown to be responded to more quickly, to be more resistant to change, and to be more consequential in the attitude similarity attraction relation- ship. The substantive results are interpreted in terms of attitude strength and niche building. More generally, the implications of heritability for the generality and typicality of treatment effects are also discussed. Although psychologists clearly recognize the impact of genet- heritabilities is both long and surprising. As noted earlier, the ics on behavior, their theories rarely reflect this knowledge. intellectual abilities domain has received the most press, and Most theories assume that behavior is relatively plastic and is the genetic contribution to that domain is well documented shaped almost entirely by situational parameters. The possibil- (e.g., Loehlin, Willerman, & Horn, 1988; Plomin & Rende, ity that a response may have a high heritability is often ignored. 1991). There is also evidence of genetic contributions to spe- I argue here that ignoring this possibility is consequential. The cific cognitive abilities, school achievement, creativity, reading vehicle used in this article is attitudes. This vehicle was chosen disability, and mental retardation (see Plomin, 1989, for a re- because it is a domain with which I have some familiarity; it is a view). -
An Introduction to Quantitative Genetics I Heather a Lawson Advanced Genetics Spring2018 Outline
An Introduction to Quantitative Genetics I Heather A Lawson Advanced Genetics Spring2018 Outline • What is Quantitative Genetics? • Genotypic Values and Genetic Effects • Heritability • Linkage Disequilibrium and Genome-Wide Association Quantitative Genetics • The theory of the statistical relationship between genotypic variation and phenotypic variation. 1. What is the cause of phenotypic variation in natural populations? 2. What is the genetic architecture and molecular basis of phenotypic variation in natural populations? • Genotype • The genetic constitution of an organism or cell; also refers to the specific set of alleles inherited at a locus • Phenotype • Any measureable characteristic of an individual, such as height, arm length, test score, hair color, disease status, migration of proteins or DNA in a gel, etc. Nature Versus Nurture • Is a phenotype the result of genes or the environment? • False dichotomy • If NATURE: my genes made me do it! • If NURTURE: my mother made me do it! • The features of an organisms are due to an interaction of the individual’s genotype and environment Genetic Architecture: “sum” of the genetic effects upon a phenotype, including additive,dominance and parent-of-origin effects of several genes, pleiotropy and epistasis Different genetic architectures Different effects on the phenotype Types of Traits • Monogenic traits (rare) • Discrete binary characters • Modified by genetic and environmental background • Polygenic traits (common) • Discrete (e.g. bristle number on flies) or continuous (human height) -
'Great Is Darwin and Bergson His Poet': Julian Huxley's Other
This is a repository copy of ‘Great is Darwin and Bergson his poet’: Julian Huxley's other evolutionary synthesis. White Rose Research Online URL for this paper: http://eprints.whiterose.ac.uk/124449/ Version: Accepted Version Article: Herring, E (2018) ‘Great is Darwin and Bergson his poet’: Julian Huxley's other evolutionary synthesis. Annals of Science, 75 (1). pp. 40-54. ISSN 0003-3790 https://doi.org/10.1080/00033790.2017.1407442 (c) 2018 Informa UK Limited, trading as Taylor & Francis Group. This is an Accepted Manuscript of an article published by Taylor & Francis in Annals of Science on 04 Jan 2018, available online: http://www.tandfonline.com/10.1080/00033790.2017.1407442 Reuse Items deposited in White Rose Research Online are protected by copyright, with all rights reserved unless indicated otherwise. They may be downloaded and/or printed for private study, or other acts as permitted by national copyright laws. The publisher or other rights holders may allow further reproduction and re-use of the full text version. This is indicated by the licence information on the White Rose Research Online record for the item. Takedown If you consider content in White Rose Research Online to be in breach of UK law, please notify us by emailing [email protected] including the URL of the record and the reason for the withdrawal request. [email protected] https://eprints.whiterose.ac.uk/ “Great is Darwin and Bergson his poet”: Julian Huxley’s Other Evolutionary Synthesis. Emily Herring School of Philosophy, Religion and History of Science, University of Leeds, Leeds, United Kingdom Email: [email protected] Address: School of Philosophy, Religion and History of Science, University of Leeds, Woodhouse Lane, Leeds, LS2 9JT, United Kingdom Orcid id: orcid.org/0000-0002-8377-6319 1 “Great is Darwin and Bergson his poet”: Julian Huxley’s Other Evolutionary Synthesis. -
Is the Germline Immortal and Continuous? a Discussion in Light of Ipscs and Germline Regeneration
Is the Germline Immortal and Continuous? A Discussion in Light of iPSCs and Germline Regeneration 1 1 Kate MacCord and B. Duygu Özpolat 1 - Marine Biological Laboratory, Woods Hole, MA, USA 1 ABSTRACT The germline gives rise to gametes, is the hereditary cell lineage, and is often called immortal and continuous. However, what exactly is immortal and continuous about the germline has recently come under scrutiny. The notion of an immortal and continuous germline has been around for over 130 years, and has led to the concept of a barrier between the germline and soma (the “Weismann barrier”). One repercussion of such a barrier is the understanding that when the germline is lost, soma cannot replace it, rendering the organism infertile. Recent research on induced pluripotent stem cells (iPSCs) and germline regeneration raise questions about the impermeability of the Weismann barrier and the designation of the germline as immortal and continuous. How we conceive of the germline and its immortality shapes what we perceive to be possible in animal biology, such as whether somatic cells contribute to the germline in some metazoans during normal development or regeneration. We argue that reassessing the universality of germline immortality and continuity across all metazoans leads to big and exciting open questions about the germ-soma cell distinction, cell reprogramming, germline editing, and even evolution. 2 1.0 Introduction The germline is the lineage of reproductive cells that includes gametes and their precursors, including primordial germ cells and germline stem cells. Because the germline gives rise to the gametes, it is the hereditary cell lineage, and is ultimately responsible for all cells in an organism’s body, including the next generation of the germline, stem cells, and other somatic cells. -
Myths and Legends of the Baldwin Effect
Myths and Legends of the Baldwin Effect Peter Turney Institute for Information Technology National Research Council Canada Ottawa, Ontario, Canada, K1A 0R6 [email protected] Abstract ary computation when there is an evolving population of learning individuals (Ackley and Littman, 1991; Belew, This position paper argues that the Baldwin effect 1989; Belew et al., 1991; French and Messinger, 1994; is widely misunderstood by the evolutionary Hart, 1994; Hart and Belew, 1996; Hightower et al., 1996; computation community. The misunderstandings Whitley and Gruau, 1993; Whitley et al., 1994). This syn- appear to fall into two general categories. Firstly, ergetic effect is usually called the Baldwin effect. This has it is commonly believed that the Baldwin effect is produced the misleading impression that there is nothing concerned with the synergy that results when more to the Baldwin effect than synergy. A myth or legend there is an evolving population of learning indi- has arisen that the Baldwin effect is simply a special viduals. This is only half of the story. The full instance of synergy. One of the goals of this paper is to story is more complicated and more interesting. dispel this myth. The Baldwin effect is concerned with the costs Roughly speaking (we will be more precise later), the and benefits of lifetime learning by individuals in Baldwin effect has two aspects. First, lifetime learning in an evolving population. Several researchers have individuals can, in some situations, accelerate evolution. focussed exclusively on the benefits, but there is Second, learning is expensive. Therefore, in relatively sta- much to be gained from attention to the costs. -
Reticulate Evolution Everywhere
Reticulate Evolution Everywhere Nathalie Gontier Abstract Reticulation is a recurring evolutionary pattern found in phylogenetic reconstructions of life. The pattern results from how species interact and evolve by mechanisms and processes including symbiosis; symbiogenesis; lateral gene transfer (that occurs via bacterial conjugation, transformation, transduction, Gene Transfer Agents, or the movements of transposons, retrotransposons, and other mobile genetic elements); hybridization or divergence with gene flow; and infec- tious heredity (induced either directly by bacteria, bacteriophages, viruses, pri- ons, protozoa and fungi, or via vectors that transmit these pathogens). Research on reticulate evolution today takes on inter- and transdisciplinary proportions and is able to unite distinct research fields ranging from microbiology and molecular genetics to evolutionary biology and the biomedical sciences. This chapter sum- marizes the main principles of the diverse reticulate evolutionary mechanisms and situates them into the chapters that make up this volume. Keywords Reticulate evolution · Symbiosis · Symbiogenesis · Lateral Gene Transfer · Infectious agents · Microbiome · Viriome · Virolution · Hybridization · Divergence with gene flow · Evolutionary patterns · Extended Synthesis 1 Reticulate Evolution: Patterns, Processes, Mechanisms According to the Online Etymology Dictionary (http://www.etymonline.com), the word reticulate is an adjective that stems from the Latin words “re¯ticulātus” (having a net-like pattern) and re¯ticulum (little net). When scholars identify the evolution of life as being “reticulated,” they first and foremost refer to a recurring evolutionary pattern. N. Gontier (*) AppEEL—Applied Evolutionary Epistemology Lab, University of Lisbon, Lisbon, Portugal e-mail: [email protected] © Springer International Publishing Switzerland 2015 1 N. Gontier (ed.), Reticulate Evolution, Interdisciplinary Evolution Research 3, DOI 10.1007/978-3-319-16345-1_1 2 N.