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Opuscula Philolichenum, 11: 120-XXXX
Opuscula Philolichenum, 13: 102-121. 2014. *pdf effectively published online 15September2014 via (http://sweetgum.nybg.org/philolichenum/) Lichens and lichenicolous fungi of Grasslands National Park (Saskatchewan, Canada) 1 COLIN E. FREEBURY ABSTRACT. – A total of 194 lichens and 23 lichenicolous fungi are reported. New for North America: Rinodina venostana and Tremella christiansenii. New for Canada and Saskatchewan: Acarospora rosulata, Caloplaca decipiens, C. lignicola, C. pratensis, Candelariella aggregata, C. antennaria, Cercidospora lobothalliae, Endocarpon loscosii, Endococcus oreinae, Fulgensia subbracteata, Heteroplacidium zamenhofianum, Lichenoconium lichenicola, Placidium californicum, Polysporina pusilla, Rhizocarpon renneri, Rinodina juniperina, R. lobulata, R. luridata, R. parasitica, R. straussii, Stigmidium squamariae, Verrucaria bernaicensis, V. fusca, V. inficiens, V. othmarii, V. sphaerospora and Xanthoparmelia camtschadalis. New for Saskatchewan alone: Acarospora stapfiana, Arthonia glebosa, A. epiphyscia, A. molendoi, Blennothallia crispa, Caloplaca arenaria, C. chrysophthalma, C. citrina, C. grimmiae, C. microphyllina, Candelariella efflorescens, C. rosulans, Diplotomma venustum, Heteroplacidium compactum, Intralichen christiansenii, Lecanora valesiaca, Lecidea atrobrunnea, Lecidella wulfenii, Lichenodiplis lecanorae, Lichenostigma cosmopolites, Lobothallia praeradiosa, Micarea incrassata, M. misella, Physcia alnophila, P. dimidiata, Physciella chloantha, Polycoccum clauzadei, Polysporina subfuscescens, P. urceolata, -
Mycosphaerella Is Polyphyletic
available online at www.studiesinmycology.org STUDIES IN MYCOLOGY 58: 1–32. 2007. doi:0.3114/sim.2007.58.0 Mycosphaerella is polyphyletic P.W. Crous*, U. Braun2 and J.Z. Groenewald CBS Fungal Biodiversity Centre, P.O. Box 85167, 3508 AD, Utrecht, The Netherlands; 2Martin-Luther-Universität, Institut für Biologie, Geobotanik und Botanischer Garten, Herbarium, Neuwerk 21, D-06099 Halle, Germany *Correspondence: Pedro W. Crous, [email protected] Abstract: Mycosphaerella, one of the largest genera of ascomycetes, encompasses several thousand species and has anamorphs residing in more than 30 form genera. Although previous phylogenetic studies based on the ITS rDNA locus supported the monophyly of the genus, DNA sequence data derived from the LSU gene distinguish several clades and families in what has hitherto been considered to represent the Mycosphaerellaceae. Several important leaf spotting and extremotolerant species need to be disposed to the genus Teratosphaeria, for which a new family, the Teratosphaeriaceae, is introduced. Other distinct clades represent the Schizothyriaceae, Davidiellaceae, Capnodiaceae, and the Mycosphaerellaceae. Within the two major clades, namely Teratosphaeriaceae and Mycosphaerellaceae, most anamorph genera are polyphyletic, and new anamorph concepts need to be derived to cope with dual nomenclature within the Mycosphaerella complex. Taxonomic novelties: Batcheloromyces eucalypti (Alcorn) Crous & U. Braun, comb. nov., Catenulostroma Crous & U. Braun, gen. nov., Catenulostroma abietis (Butin & Pehl) Crous & U. Braun, comb. nov., Catenulostroma chromoblastomycosum Crous & U. Braun, sp. nov., Catenulostroma elginense (Joanne E. Taylor & Crous) Crous & U. Braun, comb. nov., Catenulostroma excentricum (B. Sutton & Ganap.) Crous & U. Braun, comb. nov., Catenulostroma germanicum Crous & U. Braun, sp. nov., Catenulostroma macowanii (Sacc.) Crous & U. -
The 2018 Classification and Checklist of Lichenicolous Fungi, with 2000 Non- Lichenized, Obligately Lichenicolous Taxa Author(S): Paul Diederich, James D
The 2018 classification and checklist of lichenicolous fungi, with 2000 non- lichenized, obligately lichenicolous taxa Author(s): Paul Diederich, James D. Lawrey and Damien Ertz Source: The Bryologist, 121(3):340-425. Published By: The American Bryological and Lichenological Society, Inc. URL: http://www.bioone.org/doi/full/10.1639/0007-2745-121.3.340 BioOne (www.bioone.org) is a nonprofit, online aggregation of core research in the biological, ecological, and environmental sciences. BioOne provides a sustainable online platform for over 170 journals and books published by nonprofit societies, associations, museums, institutions, and presses. Your use of this PDF, the BioOne Web site, and all posted and associated content indicates your acceptance of BioOne’s Terms of Use, available at www.bioone.org/page/terms_of_use. Usage of BioOne content is strictly limited to personal, educational, and non-commercial use. Commercial inquiries or rights and permissions requests should be directed to the individual publisher as copyright holder. BioOne sees sustainable scholarly publishing as an inherently collaborative enterprise connecting authors, nonprofit publishers, academic institutions, research libraries, and research funders in the common goal of maximizing access to critical research. The 2018 classification and checklist of lichenicolous fungi, with 2000 non-lichenized, obligately lichenicolous taxa Paul Diederich1,5, James D. Lawrey2 and Damien Ertz3,4 1 Musee´ national d’histoire naturelle, 25 rue Munster, L–2160 Luxembourg, Luxembourg; 2 Department of Biology, George Mason University, Fairfax, VA 22030-4444, U.S.A.; 3 Botanic Garden Meise, Department of Research, Nieuwelaan 38, B–1860 Meise, Belgium; 4 Fed´ eration´ Wallonie-Bruxelles, Direction Gen´ erale´ de l’Enseignement non obligatoire et de la Recherche scientifique, rue A. -
Proposed Generic Names for Dothideomycetes
Naming and outline of Dothideomycetes–2014 Nalin N. Wijayawardene1, 2, Pedro W. Crous3, Paul M. Kirk4, David L. Hawksworth4, 5, 6, Dongqin Dai1, 2, Eric Boehm7, Saranyaphat Boonmee1, 2, Uwe Braun8, Putarak Chomnunti1, 2, , Melvina J. D'souza1, 2, Paul Diederich9, Asha Dissanayake1, 2, 10, Mingkhuan Doilom1, 2, Francesco Doveri11, Singang Hongsanan1, 2, E.B. Gareth Jones12, 13, Johannes Z. Groenewald3, Ruvishika Jayawardena1, 2, 10, James D. Lawrey14, Yan Mei Li15, 16, Yong Xiang Liu17, Robert Lücking18, Hugo Madrid3, Dimuthu S. Manamgoda1, 2, Jutamart Monkai1, 2, Lucia Muggia19, 20, Matthew P. Nelsen18, 21, Ka-Lai Pang22, Rungtiwa Phookamsak1, 2, Indunil Senanayake1, 2, Carol A. Shearer23, Satinee Suetrong24, Kazuaki Tanaka25, Kasun M. Thambugala1, 2, 17, Saowanee Wikee1, 2, Hai-Xia Wu15, 16, Ying Zhang26, Begoña Aguirre-Hudson5, Siti A. Alias27, André Aptroot28, Ali H. Bahkali29, Jose L. Bezerra30, Jayarama D. Bhat1, 2, 31, Ekachai Chukeatirote1, 2, Cécile Gueidan5, Kazuyuki Hirayama25, G. Sybren De Hoog3, Ji Chuan Kang32, Kerry Knudsen33, Wen Jing Li1, 2, Xinghong Li10, ZouYi Liu17, Ausana Mapook1, 2, Eric H.C. McKenzie34, Andrew N. Miller35, Peter E. Mortimer36, 37, Dhanushka Nadeeshan1, 2, Alan J.L. Phillips38, Huzefa A. Raja39, Christian Scheuer19, Felix Schumm40, Joanne E. Taylor41, Qing Tian1, 2, Saowaluck Tibpromma1, 2, Yong Wang42, Jianchu Xu3, 4, Jiye Yan10, Supalak Yacharoen1, 2, Min Zhang15, 16, Joyce Woudenberg3 and K. D. Hyde1, 2, 37, 38 1Institute of Excellence in Fungal Research and 2School of Science, Mae Fah Luang University, -
Hongos Liquenícolas, Dothideomycetes), Un Nombre Prioritario Sobre S
Revista Catalana de Micologia, vol. 39: 117-127; 2018. 117 SPHAERELLOTHECIUM PUMILUM COMB. NOV. (HONGOS LIQUENÍCOLAS, DOTHIDEOMYCETES), UN NOMBRE PRIORITARIO SOBRE S. AIPOLIUM. NAVARRO-ROSINÉS, P.1; ROUX, C.2 & HAFELLNER, J.3 1 - Departament de Biologia Evolutiva, Ecologia i Ciències Ambientals (BEECA), Secció de Botànica i Micologia, Institut de Recerca de la Biodiversitat (IRBio), Facultat de Biologia. Av. Diagonal, 643. ES-08028, Barcelona. E-mail: [email protected] 2 - Chemin des Vignes-Vieilles, FR-84120 Mirabeau, France. E-mail: [email protected] 3 - Institut für Pflanzenwissenschaften, NAWI Graz, Karl-Franzens-Universität, Holteigasse 6, A-8010 Graz, Austria. E-mail: [email protected] RESUMEN. Sphaerellothecium pumilum comb. nov. (hongos liquenícolas, Dothideomycetes), un nombre prioritario sobre S. aipolium. Por las características del hamatecio, se propone como nueva combinación Sphaerellothecium pumilum (Lettau) Nav.-Ros., Cl. Roux et Hafellner, para incluir Stigmidium pumilum (Lettau) Matzer et Hafellner. Sphaerellothecium aipolium Vouaux ex Nav.-Ros. et Cl. Roux es considerado un sinónimo de este taxón. Se comenta la repartición geográfica conocida de esta especie y se discuten algunos aspectos de su morfología. Sphaerellothecium pumilum se menciona por primera vez para Liechtenstein, Rumanía, Armenia, Mongolia, Nepal y Canadá. Palabras clave: hongos liquenícolas, Mycosphaerellaceae, Sphaerellothecium pumilum comb. nov., Stigmidium pumilum, Sphaerellothecium aipolium RÉSUMÉ. Sphaerellothecium pumilum comb. nov. (champignons lichénicoles, Dothideomycetes), un nom prioritaire sur S. aipolium. En raison des caractéristiques de l'hamathécium, nous proposons la nouvelle combinaison Sphaerellothecium pumilum (Lettau) Nav.-Ros., Cl. Roux et Hafellner, pour inclure Stigmidium pumilum (Lettau) Matzer et Hafellner. Sphaerellothecium aipolium Vouaux ex Nav.-Ros. et Cl. Roux est considéré comme un synonyme de ce taxon. -
An Online Resource for Marine Fungi
Fungal Diversity https://doi.org/10.1007/s13225-019-00426-5 (0123456789().,-volV)(0123456789().,- volV) An online resource for marine fungi 1,2 3 1,4 5 6 E. B. Gareth Jones • Ka-Lai Pang • Mohamed A. Abdel-Wahab • Bettina Scholz • Kevin D. Hyde • 7,8 9 10 11 12 Teun Boekhout • Rainer Ebel • Mostafa E. Rateb • Linda Henderson • Jariya Sakayaroj • 13 6 6,17 14 Satinee Suetrong • Monika C. Dayarathne • Vinit Kumar • Seshagiri Raghukumar • 15 1 16 6 K. R. Sridhar • Ali H. A. Bahkali • Frank H. Gleason • Chada Norphanphoun Received: 3 January 2019 / Accepted: 20 April 2019 Ó School of Science 2019 Abstract Index Fungorum, Species Fungorum and MycoBank are the key fungal nomenclature and taxonomic databases that can be sourced to find taxonomic details concerning fungi, while DNA sequence data can be sourced from the NCBI, EBI and UNITE databases. Nomenclature and ecological data on freshwater fungi can be accessed on http://fungi.life.illinois.edu/, while http://www.marinespecies.org/provides a comprehensive list of names of marine organisms, including information on their synonymy. Previous websites however have little information on marine fungi and their ecology, beside articles that deal with marine fungi, especially those published in the nineteenth and early twentieth centuries may not be accessible to those working in third world countries. To address this problem, a new website www.marinefungi.org was set up and is introduced in this paper. This website provides a search facility to genera of marine fungi, full species descriptions, key to species and illustrations, an up to date classification of all recorded marine fungi which includes all fungal groups (Ascomycota, Basidiomycota, Blastocladiomycota, Chytridiomycota, Mucoromycota and fungus-like organisms e.g. -
ITS2 Metabarcoding Analysis Complements Lichen Mycobiome Diversity Data
Mycological Progress (2018) 17:1049–1066 https://doi.org/10.1007/s11557-018-1415-4 ORIGINAL ARTICLE ITS2 metabarcoding analysis complements lichen mycobiome diversity data Elisa Banchi1 & David Stankovic1,2 & Fernando Fernández-Mendoza3 & Fabrizia Gionechetti1 & Alberto Pallavicini1 & Lucia Muggia 1,3 Received: 9 April 2018 /Revised: 12 May 2018 /Accepted: 4 June 2018 /Published online: 22 June 2018 # The Author(s) 2018 Abstract Lichen thalli harbor complex fungal communities (mycobiomes) of species with divergent trophic and ecological strategies. The complexity and diversity of lichen mycobiomes are still largely unknown, despite surveys combining culture-based methods and high-throughput sequencing (HTS). The results of such surveys are strongly influenced by the barcode locus chosen, its sensitivity in discriminating taxa, and the depth to which public sequence repositories cover the phylogenetic spectrum of fungi. Here, we use HTS of the internal transcribed spacer 2 (ITS2) to assess the taxonomic composition and diversity of a well- characterized, alpine rock lichen community that includes thalli symptomatically infected by lichenicolous fungi as well as asymptomatic thalli. Taxa belonging to the order Chaetothyriales are the major components of the observed lichen mycobiomes. We predict sequences representative of lichenicolous fungi characterized morphologically and assess their asymptomatic pres- ence in lichen thalli. We demonstrated the limitations of metabarcoding in fungi and show how the estimation of species diversity widely differs when ITS1 or ITS2 are used as barcode, and particularly biases the detection of Basidiomycota. The complemen- tary analysis of both ITS1 and ITS2 loci is therefore required to reliably estimate the diversity of lichen mycobiomes. Keywords Ascomycetes .